Citrus Sinensis ID: 027064

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL
Secondary Structure (PSIPRED)
ccccccccEEEEccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHcHHHHHHHHccccccccccccccHHHHHHHHHHHcccccccEEEEEccccccccHHHHHHcccccccccccccccHHHHHHcccccccccccHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHcccEEEEcccccccHHHHHHHccEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHHHHHccEEEEEEEcccccHHHHHHHHHHHHHcccccEEEEcccccccccHHHHHHcccHHHEcccccHHHHHHHHccccccccccHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHcccEEEEEccccccHHHHHccccEEEEcccccccEccccc
Coil and Loop (DISEMBL)
maapsdqkatiiDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGiksfdidlpeqvSEAELISKVHelnvmpdvhgilvqlplpkhineekvlgeislekdvdgfhplnigklamkgrdplflpctpkgcLELLkrsgvtikgkrAVVVGRSNIVGLPVSLLLLKADATVTIVhshttdpesivREADIVIAAAGQAMMVTMGIL
Flexible Loop (DISEMBL)
maapsdqkatiidgkavaQTIRSEIAEEVRLLsekygkvpgLAVVIVggrkdsqsyVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKrsgvtikgkravvvgrsniVGLPVSLLLLKADATVTIVHshttdpesivrEADIVIAAAGQAMMVTMGIL
Low Complexity Region (SEG)
MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL
Disordered region (IsUnstruct)
**********IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT****
Disordered Region (DISOPRED)
******Q***IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL
Disordered Region (DISEMBL)
*********TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL
Disordered Region (DISPRO)
*******KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	229	2.2.26 [Sep-21-2011]
A0LE04	285	Bifunctional protein FolD	yes	no	0.934	0.750	0.564	8e-60
A4IQS0	284	Bifunctional protein FolD	yes	no	0.930	0.75	0.555	8e-58
Q8Y7C5	284	Bifunctional protein FolD	yes	no	0.921	0.742	0.556	8e-58
Q92BZ4	284	Bifunctional protein FolD	yes	no	0.921	0.742	0.556	1e-57
C1L2R6	284	Bifunctional protein FolD	yes	no	0.921	0.742	0.556	1e-57
B8DFW8	284	Bifunctional protein FolD	yes	no	0.921	0.742	0.556	1e-57
A5GAM5	280	Bifunctional protein FolD	yes	no	0.930	0.760	0.560	1e-57
Q71ZW2	284	Bifunctional protein FolD	yes	no	0.921	0.742	0.556	4e-57
Q39WH4	285	Bifunctional protein FolD	yes	no	0.930	0.747	0.555	4e-57
B1HRX9	284	Bifunctional protein FolD	yes	no	0.934	0.753	0.516	4e-56

>sp|A0LE04|FOLD_MAGSM Bifunctional protein FolD OS=Magnetococcus sp. (strain MC-1) GN=folD PE=3 SV=1

 Score =  229 bits (585), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 122/216 (56%), Positives = 149/216 (68%), Gaps = 2/216 (0%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A +IDGKA+AQ++R E+  EV  L   +   PGLAVV+VG    SQ YV  K++AC   G
Sbjct: 2   AHVIDGKAIAQSVREELRMEVERLKLNHQLTPGLAVVLVGADPASQVYVRNKKRACETAG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I SF  +L    S+AEL++ + +LN    VHGILVQLPLPKHI+E+KVL  IS  KD DG
Sbjct: 62  IASFSHELAATTSQAELLALIEQLNQDDAVHGILVQLPLPKHIDEQKVLEAISPSKDADG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP N+G+L     DP F PCTP G +E+LK SGV  KGK AVV+GRSNIVG PV+L+LL
Sbjct: 122 FHPYNVGRLVTG--DPTFQPCTPWGVMEMLKVSGVDPKGKHAVVIGRSNIVGKPVALMLL 179

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
            A ATVTI HS T D    V+ ADIV+AA G+A MV
Sbjct: 180 AAHATVTICHSRTPDLAETVKRADIVVAAVGRANMV 215

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.
Magnetococcus sp. (strain MC-1) (taxid: 156889)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: 9

>sp|A4IQS0|FOLD_GEOTN Bifunctional protein FolD OS=Geobacillus thermodenitrificans (strain NG80-2) GN=folD PE=3 SV=1

 Score =  223 bits (568), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 120/216 (55%), Positives = 150/216 (69%), Gaps = 3/216 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A II G  +A+TIR+E+A+EV  L    G  PGLAV++VG    S SYV  K+KACAEVG
Sbjct: 3   AQIISGTELAKTIRAELADEVAKLKAN-GIEPGLAVILVGDDPASHSYVKGKQKACAEVG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I+S     P  +SE EL++K+ ELN  P VHGILVQLPLP HI E  V+  I+ EKDVDG
Sbjct: 62  IRSLLYTFPATISEEELLAKIQELNADPTVHGILVQLPLPAHIREWSVIETIAPEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP+N+GK+ M G+ P FLPCTP G L ++K +G+ I GK  VVVGRSNIVG PV  L L
Sbjct: 122 FHPINVGKM-MIGQ-PAFLPCTPHGVLVMVKSAGIDIAGKHVVVVGRSNIVGKPVGQLFL 179

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           +  ATVT  HS T D  +I R+ADI+I A G+A ++
Sbjct: 180 REHATVTYAHSKTPDLAAITRQADILIVAVGKARLI 215

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Geobacillus thermodenitrificans (strain NG80-2) (taxid: 420246)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|Q8Y7C5|FOLD_LISMO Bifunctional protein FolD OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=folD PE=3 SV=1

 Score =  223 bits (568), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 119/214 (55%), Positives = 155/214 (72%), Gaps = 3/214 (1%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+K
Sbjct: 4   IIDGKKLAKEIQEKVTREVAELV-KEGKQPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFH
Sbjct: 63  SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISFDKDVDGFH 122

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
           P+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           +ATVTI HS T D   + +EADI++ A G A  V
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFV 214

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (taxid: 169963)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|Q92BZ4|FOLD_LISIN Bifunctional protein FolD OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=folD PE=3 SV=1

 Score =  223 bits (567), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 119/214 (55%), Positives = 154/214 (71%), Gaps = 3/214 (1%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+K
Sbjct: 4   IIDGKKLAKEIQEKVTSEVAELV-KQGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S  I+LPE V+E +L+  V ELN    +HGILVQLPLPKHI+EEKV+  IS +KDVDGFH
Sbjct: 63  SVLIELPETVTEEKLLKVVEELNEDNTIHGILVQLPLPKHISEEKVIDAISFDKDVDGFH 122

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
           P+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           +ATVTI HS T D   + +EADI++ A G A  V
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFV 214

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Listeria innocua serovar 6a (strain CLIP 11262) (taxid: 272626)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|C1L2R6|FOLD_LISMC Bifunctional protein FolD OS=Listeria monocytogenes serotype 4b (strain CLIP80459) GN=folD PE=3 SV=1

 Score =  223 bits (567), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 119/214 (55%), Positives = 155/214 (72%), Gaps = 3/214 (1%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+K
Sbjct: 4   IIDGKKLAKEIQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFH
Sbjct: 63  SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFH 122

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
           P+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           +ATVTI HS T D   + +EADI++ A G A  V
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFV 214

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Listeria monocytogenes serotype 4b (strain Clip81459) (taxid: 568819)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|B8DFW8|FOLD_LISMH Bifunctional protein FolD OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=folD PE=3 SV=1

 Score =  223 bits (567), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 119/214 (55%), Positives = 155/214 (72%), Gaps = 3/214 (1%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+K
Sbjct: 4   IIDGKKLAKEIQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFH
Sbjct: 63  SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFH 122

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
           P+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           +ATVTI HS T D   + +EADI++ A G A  V
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFV 214

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Listeria monocytogenes serotype 4a (strain HCC23) (taxid: 552536)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|A5GAM5|FOLD_GEOUR Bifunctional protein FolD OS=Geobacter uraniireducens (strain Rf4) GN=folD PE=3 SV=1

 Score =  222 bits (566), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/216 (56%), Positives = 149/216 (68%), Gaps = 3/216 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A IIDGKA+A  IR EI  EV  L+ K G  PGLAVV+VG    S+ YVSMK KAC +VG
Sbjct: 2   AKIIDGKAIAAKIRGEITAEVAKLASK-GVTPGLAVVLVGEDPASKVYVSMKEKACKDVG 60

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I S +  LP   SEA+L+  +H+LN  P +HGIL+QLPLPK I+ EKVL  IS EKD DG
Sbjct: 61  IFSDEYKLPVDTSEADLLLLIHKLNSDPKIHGILIQLPLPKQIDTEKVLEAISPEKDADG 120

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP N+G+L +    PLF PCTP G + +LK +GV + GK  VVVGRSNIVG PV+ + L
Sbjct: 121 FHPYNVGRLVIG--KPLFQPCTPYGVMVMLKEAGVELAGKEVVVVGRSNIVGKPVAFMCL 178

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           + +ATVT+ HS T D  + V  AD+VIAA GQ  M+
Sbjct: 179 QQNATVTLCHSKTRDLAAKVGMADVVIAAVGQPEMI 214

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Geobacter uraniireducens (strain Rf4) (taxid: 351605)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|Q71ZW2|FOLD_LISMF Bifunctional protein FolD OS=Listeria monocytogenes serotype 4b (strain F2365) GN=folD PE=3 SV=1

 Score =  221 bits (562), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/214 (55%), Positives = 155/214 (72%), Gaps = 3/214 (1%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+K
Sbjct: 4   IIDGKKLAKEIQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFH
Sbjct: 63  SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFH 122

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
           P+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLIE 180

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           +ATVTI HS T D   + +EADI++ A G A  V
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFV 214

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Listeria monocytogenes serotype 4b (strain F2365) (taxid: 265669)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|Q39WH4|FOLD2_GEOMG Bifunctional protein FolD 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=folD2 PE=3 SV=1

 Score =  221 bits (562), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 120/216 (55%), Positives = 151/216 (69%), Gaps = 3/216 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           +TIIDGKA+A  +R+EIA EV++L EK G +PGLA V+VG    S+ YV MK  AC E+G
Sbjct: 2   STIIDGKAIAAKLRAEIATEVKILKEK-GIIPGLATVLVGEDPASEVYVRMKGNACQELG 60

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           + S    LP   +EAEL++ V  LN  P +HGILVQLPLPK IN + +L  IS  KDVDG
Sbjct: 61  MHSVKHTLPATTTEAELLALVARLNSDPTIHGILVQLPLPKQINSDTILEAISPVKDVDG 120

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP N+G+L M G+ P F PCTP G + +L+ +GV + GK  VVVGRSNIVG PV+L+ L
Sbjct: 121 FHPYNVGRL-MVGK-PTFQPCTPYGVMVMLREAGVDLAGKEVVVVGRSNIVGKPVALMCL 178

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           +  ATVTI HS T D  S V+EAD+VIAA G   M+
Sbjct: 179 QQHATVTICHSKTRDLPSKVKEADVVIAAVGVPEMI 214

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) (taxid: 269799)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|B1HRX9|FOLD_LYSSC Bifunctional protein FolD OS=Lysinibacillus sphaericus (strain C3-41) GN=folD PE=3 SV=1

 Score =  218 bits (554), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 112/217 (51%), Positives = 157/217 (72%), Gaps = 3/217 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           + II+GK + Q IR+ +AE V  L E+ G  PGLAVV+VG  + S +YV  K+K+C  +G
Sbjct: 3   SAIINGKEIGQEIRNAVAERVIRLKEQ-GLTPGLAVVLVGDNQASATYVRNKQKSCEAIG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           + S  I LPE+  + EL++++ +LN   D+HGILVQLPLPKHI+E+ V+  I++EKDVDG
Sbjct: 62  MYSELIKLPEETKQEELLTQIQQLNQREDIHGILVQLPLPKHIDEDTVIATIAVEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           F P+++GK+ M G++  FLPCTP G ++LL+ SG+ I GK AV+VGRS+IVG P+  LLL
Sbjct: 122 FSPVSVGKM-MLGQE-TFLPCTPFGVMKLLEYSGIEIAGKHAVIVGRSHIVGKPMGQLLL 179

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           + DATVT  HS T D  S  ++ADI+IAA G+A  +T
Sbjct: 180 QKDATVTYTHSKTPDLPSFTKQADILIAAVGRANFIT 216

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Lysinibacillus sphaericus (strain C3-41) (taxid: 444177)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
359479954	307	PREDICTED: c-1-tetrahydrofolate synthase	0.978	0.729	0.875	1e-110
255582158	299	methylenetetrahydrofolate dehydrogenase,	0.978	0.749	0.888	1e-110
118488628	299	unknown [Populus trichocarpa]	0.978	0.749	0.857	1e-107
356572720	294	PREDICTED: c-1-tetrahydrofolate synthase	0.943	0.734	0.884	1e-107
255646414	294	unknown [Glycine max]	0.943	0.734	0.879	1e-106
358248138	294	uncharacterized protein LOC100783652 [Gl	0.943	0.734	0.870	1e-106
449469104	299	PREDICTED: c-1-tetrahydrofolate synthase	0.978	0.749	0.830	1e-105
4103987	294	5,10-methylenetetrahydrofolate dehydroge	0.943	0.734	0.870	1e-105
388517953	236	unknown [Lotus japonicus]	0.943	0.915	0.870	1e-104
21553669	299	5,10-methylenetetrahydrofolate dehydroge	0.978	0.749	0.843	1e-104

>gi|359479954|ref|XP_002263128.2| PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic [Vitis vinifera]

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/224 (87%), Positives = 212/224 (94%)

Query: 1   MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMK 60
           MA+P   KA+IIDGKA+AQ IRSEIAEEVR LSEKYGKVPGLAVVIVG RKDSQSYVSMK
Sbjct: 1   MASPDGHKASIIDGKAIAQAIRSEIAEEVRHLSEKYGKVPGLAVVIVGNRKDSQSYVSMK 60

Query: 61  RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEI 120
           RKACAEVGIKSFD+DLPEQV E+ELI KVHELN +PDVHGILVQLPLPKHINEEKVL EI
Sbjct: 61  RKACAEVGIKSFDVDLPEQVLESELIGKVHELNALPDVHGILVQLPLPKHINEEKVLSEI 120

Query: 121 SLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVG 180
           SLEKDVDGFHPLNIGKLAMKGR+PLFLPCTPKGCLELL RSG+++KGK+AVVVGRSNIVG
Sbjct: 121 SLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGISVKGKKAVVVGRSNIVG 180

Query: 181 LPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           LPV+LLLLKADATVT+VHSHT DPESI+R+ADIVIAAAGQAMM+
Sbjct: 181 LPVALLLLKADATVTVVHSHTQDPESIIRDADIVIAAAGQAMMI 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582158|ref|XP_002531873.1| methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis] gi|223528481|gb|EEF30510.1| methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/224 (88%), Positives = 211/224 (94%)

Query: 1   MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMK 60
           MAAPSD KATIIDGKA+AQTIRSEIA+EVR LSEKYGKVPGLAVVIVG RKDSQSYVSMK
Sbjct: 1   MAAPSDHKATIIDGKAIAQTIRSEIADEVRQLSEKYGKVPGLAVVIVGNRKDSQSYVSMK 60

Query: 61  RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEI 120
           RKACAEVGIKSFDI+LPEQVSEAELISKVHELN   DVHGILVQLPLPKHINEEKVL EI
Sbjct: 61  RKACAEVGIKSFDINLPEQVSEAELISKVHELNANTDVHGILVQLPLPKHINEEKVLSEI 120

Query: 121 SLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVG 180
           S+EKDVDGFHPLNIGKLAMKGR+PLFLPCTPKGCLELL RSG++IKGK+AVVVGRSNIVG
Sbjct: 121 SIEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGISIKGKKAVVVGRSNIVG 180

Query: 181 LPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           LPVSLLLLKADATV+IVHS T DPE I+ EADI+IAAAGQ MM+
Sbjct: 181 LPVSLLLLKADATVSIVHSRTEDPERIICEADIIIAAAGQPMMI 224

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488628|gb|ABK96126.1| unknown [Populus trichocarpa]

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/224 (85%), Positives = 207/224 (92%)

Query: 1   MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMK 60
           MA+ S+ KAT+IDGK +AQTIRSEIAEEVR LSEKYGKVPGLAVVIVG RKDSQSYV MK
Sbjct: 1   MASQSEHKATVIDGKLIAQTIRSEIAEEVRQLSEKYGKVPGLAVVIVGNRKDSQSYVGMK 60

Query: 61  RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEI 120
           RKACAEVGI+SFD+DLPEQ+SEAEL+SKVHELN  PDVHGILVQLPLPKHINEEKVL EI
Sbjct: 61  RKACAEVGIQSFDMDLPEQISEAELVSKVHELNANPDVHGILVQLPLPKHINEEKVLSEI 120

Query: 121 SLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVG 180
           SL KDVDGFHPLNIGKLAMK R+PLF PCTPKGCLELL RSGV+IKGKRAVVVGRSNIVG
Sbjct: 121 SLAKDVDGFHPLNIGKLAMKDREPLFQPCTPKGCLELLHRSGVSIKGKRAVVVGRSNIVG 180

Query: 181 LPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           LPVSLLLLKADATVT+VHS + D ESI+READI+IAAAGQ MM+
Sbjct: 181 LPVSLLLLKADATVTVVHSRSNDQESIIREADIIIAAAGQPMMI 224

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572720|ref|XP_003554514.1| PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic-like [Glycine max]

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/216 (88%), Positives = 205/216 (94%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           AT+IDGKAVAQ IRSEIA+EVRLLS+KYGKVPGLAVVIVG RKDSQSYV MKRKACAE+G
Sbjct: 2   ATVIDGKAVAQIIRSEIADEVRLLSQKYGKVPGLAVVIVGNRKDSQSYVGMKRKACAELG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           IKSFD+DLPEQVS+AELI +VHELNV PDVHGILVQLPLPKHINEEKVL EISLEKDVDG
Sbjct: 62  IKSFDVDLPEQVSQAELIKQVHELNVNPDVHGILVQLPLPKHINEEKVLTEISLEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHPLNIGKLAMKGRDPLFLPCTPK C+ELL+RSGV+IKGK+AVVVGRSNIVGLP SLLLL
Sbjct: 122 FHPLNIGKLAMKGRDPLFLPCTPKACIELLQRSGVSIKGKKAVVVGRSNIVGLPASLLLL 181

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           KADATVTIVHSHT+ PESI+ EADIVIAAAGQ MM+
Sbjct: 182 KADATVTIVHSHTSQPESIIHEADIVIAAAGQPMMI 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646414|gb|ACU23686.1| unknown [Glycine max]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/216 (87%), Positives = 204/216 (94%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           AT+IDGKAVAQ IRSEIA+EVRLLS+KYGKVPGLAVVIVG RKDSQSY  MKRKACAE+G
Sbjct: 2   ATVIDGKAVAQIIRSEIADEVRLLSQKYGKVPGLAVVIVGNRKDSQSYAGMKRKACAELG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           IKSFD+DLPEQVS+AELI +VHELNV PDVHGILVQLPLPKHINEEKVL EISLEKDVDG
Sbjct: 62  IKSFDVDLPEQVSQAELIKQVHELNVNPDVHGILVQLPLPKHINEEKVLTEISLEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHPLNIGKLAMKGRDPLFLPCTPK C+ELL+RSGV+IKGK+AVVVGRSNIVGLP SLLLL
Sbjct: 122 FHPLNIGKLAMKGRDPLFLPCTPKACIELLQRSGVSIKGKKAVVVGRSNIVGLPASLLLL 181

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           KADATVTIVHSHT+ PESI+ EADIVIAAAGQ MM+
Sbjct: 182 KADATVTIVHSHTSQPESIIHEADIVIAAAGQPMMI 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248138|ref|NP_001239823.1| uncharacterized protein LOC100783652 [Glycine max] gi|255647576|gb|ACU24251.1| unknown [Glycine max]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/216 (87%), Positives = 205/216 (94%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           AT+IDGKAVAQTIRSEIA+EVR LS+KYGKVPGLAVVIVG RKDSQSYV MKRKACAE+G
Sbjct: 2   ATVIDGKAVAQTIRSEIADEVRQLSQKYGKVPGLAVVIVGNRKDSQSYVGMKRKACAELG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           IKSFD+DLPEQVS+AELI +VH+LN  PDVHGILVQLPLPKHINEE+VL EISLEKDVDG
Sbjct: 62  IKSFDVDLPEQVSQAELIKQVHQLNANPDVHGILVQLPLPKHINEEEVLTEISLEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHPLNIGKLAMKGRDPLFLPCTPK C+ELL+RSGV+IKGK+AVVVGRSNIVGLP SLLLL
Sbjct: 122 FHPLNIGKLAMKGRDPLFLPCTPKACIELLQRSGVSIKGKKAVVVGRSNIVGLPASLLLL 181

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           KADATVTI+HSHT+ PESI+READIVIAAAGQ MM+
Sbjct: 182 KADATVTIIHSHTSQPESIIREADIVIAAAGQPMMI 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469104|ref|XP_004152261.1| PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic-like [Cucumis sativus] gi|449484305|ref|XP_004156845.1| PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic-like [Cucumis sativus]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/224 (83%), Positives = 207/224 (92%)

Query: 1   MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMK 60
           MA+ SD KATIIDGK +AQT+RSEI EEV  LS+KYGK+PGLAVVIVG RKDS +YV+MK
Sbjct: 1   MASESDHKATIIDGKKIAQTVRSEITEEVNKLSQKYGKIPGLAVVIVGNRKDSLTYVNMK 60

Query: 61  RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEI 120
           RKAC EVGIKSF+IDLPEQVSEAELISKVHELN  P+VHGILVQLPLP HINEEKVL EI
Sbjct: 61  RKACLEVGIKSFEIDLPEQVSEAELISKVHELNANPEVHGILVQLPLPNHINEEKVLSEI 120

Query: 121 SLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVG 180
           S+EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGC+ELL RSG++I+GK+AVV+GRSNIVG
Sbjct: 121 SIEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCIELLSRSGISIRGKKAVVMGRSNIVG 180

Query: 181 LPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           LPVSLLLLKADATVTIVHS + DPES++READI+IAAAGQA M+
Sbjct: 181 LPVSLLLLKADATVTIVHSRSVDPESVIREADIIIAAAGQAQMI 224

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4103987|gb|AAD01907.1| 5,10-methylenetetrahydrofolate dehydrogenase-5,10-methenyltetrahydrofolate cyclohydrolase [Pisum sativum] gi|6002383|emb|CAB56756.1| 5,10-methylenetetrahydrofolate dehydrogenase: 5,10-methenyltetrahydrofolate cyclohydrolase [Pisum sativum]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/216 (87%), Positives = 201/216 (93%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           AT+IDGKAVAQTIRSEIA+EVRLLS+KYGKVPGLAVVIVG RKDSQSYV MKRKACAE+G
Sbjct: 2   ATVIDGKAVAQTIRSEIADEVRLLSQKYGKVPGLAVVIVGNRKDSQSYVGMKRKACAELG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           IKSFDIDLPE  SEAE+I  VHELN  PDVHGILVQLPLPKH+NEEKVL EIS+ KDVDG
Sbjct: 62  IKSFDIDLPEDASEAEIIKNVHELNANPDVHGILVQLPLPKHVNEEKVLTEISISKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHPLNIGKLAMKGRDPLFLPCTPK CLELL RSGV+IKGK+AVVVGRSNIVGLP SLLLL
Sbjct: 122 FHPLNIGKLAMKGRDPLFLPCTPKACLELLSRSGVSIKGKKAVVVGRSNIVGLPASLLLL 181

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           KADATVTIVHSHT+ PE+I+READIVIAAAGQA M+
Sbjct: 182 KADATVTIVHSHTSQPETIIREADIVIAAAGQAKMI 217

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517953|gb|AFK47038.1| unknown [Lotus japonicus]

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/216 (87%), Positives = 201/216 (93%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           AT+IDGKAVA TIRSEIA+EVRLLS+KYGKVPGLAVVIVG RKDSQSYV MKRKACAE+G
Sbjct: 2   ATVIDGKAVANTIRSEIADEVRLLSQKYGKVPGLAVVIVGNRKDSQSYVGMKRKACAELG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           IKSFDIDLPEQ SEAE+I +VHELN  PDVHGILVQLPLPKHINE+KVL EISLEKDVDG
Sbjct: 62  IKSFDIDLPEQASEAEVIKQVHELNANPDVHGILVQLPLPKHINEDKVLTEISLEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHPLNIGKLAMKGRDPLFLPCTPK C+ELL RSGV+IKGK+AVVVGRSNIVGLP SLLLL
Sbjct: 122 FHPLNIGKLAMKGRDPLFLPCTPKACIELLSRSGVSIKGKKAVVVGRSNIVGLPASLLLL 181

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           K DATVTIVHSHT+ PESI+READIVIAAA Q MM+
Sbjct: 182 KEDATVTIVHSHTSQPESIIREADIVIAAARQPMMI 217

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553669|gb|AAM62762.1| 5,10-methylenetetrahydrofolate dehydrogenase:5,10-methenyltetrahydrofolate cyclohydrolase, putative [Arabidopsis thaliana]

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/224 (84%), Positives = 205/224 (91%)

Query: 1   MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMK 60
           MA+ SD  A IIDGKA+A TIRSEIAEEVR LSEK+GKVPGLAVVIVG RKDSQ+YV+ K
Sbjct: 1   MASSSDHTAKIIDGKAIAHTIRSEIAEEVRGLSEKHGKVPGLAVVIVGSRKDSQTYVNTK 60

Query: 61  RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEI 120
           RKACAEVGIKSFD+ LPE+VSEA+LISKVHELN  PDVHGILVQLPLPKHINEE +LG I
Sbjct: 61  RKACAEVGIKSFDVGLPEEVSEADLISKVHELNSNPDVHGILVQLPLPKHINEENILGAI 120

Query: 121 SLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVG 180
           S++KDVDGFHPLNIGKLAMKGR+PLFLPCTPKGCLELL RSGV IKG+RAVVVGRSNIVG
Sbjct: 121 SIDKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLARSGVKIKGQRAVVVGRSNIVG 180

Query: 181 LPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           LPVSLLLLKADATVT VHSHT DPE+I+READIVIAA GQA M+
Sbjct: 181 LPVSLLLLKADATVTTVHSHTKDPEAIIREADIVIAACGQAHMI 224

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
TAIR|locus:2082254	299	AT3G12290 [Arabidopsis thalian	0.978	0.749	0.843	3.7e-96
TAIR|locus:2127113	360	EMB3127 "EMBRYO DEFECTIVE 3127	0.960	0.611	0.618	2.1e-70
TAIR|locus:2064143	352	AT2G38660 [Arabidopsis thalian	0.938	0.610	0.609	3.1e-67
DICTYBASE|DDB_G0283121	292	DDB_G0283121 "methenyl tetrahy	0.934	0.732	0.574	1.5e-60
TIGR_CMR|GSU_0862	285	GSU_0862 "folD bifunctional pr	0.930	0.747	0.523	9.2e-52
SGD|S000003436	946	ADE3 "Cytoplasmic trifunctiona	0.934	0.226	0.506	1.6e-50
TIGR_CMR|BA_4405	286	BA_4405 "methylenetetrahydrofo	0.934	0.748	0.502	9.5e-50
CGD|CAL0000766	946	MIS11 [Candida albicans (taxid	0.943	0.228	0.493	4.2e-49
UNIPROTKB|Q59SM8	946	MIS11 "Likely C1-tetrahydrofol	0.943	0.228	0.493	4.2e-49
TIGR_CMR|SO_1792	284	SO_1792 "methylenetetrahydrofo	0.917	0.739	0.509	6.7e-49

TAIR|locus:2082254 AT3G12290 [Arabidopsis thaliana (taxid:3702)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 189/224 (84%), Positives = 205/224 (91%)

Query:     1 MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMK 60
             MA+ SD  A IIDGKA+A TIRSEIAEEVR LSEK+GKVPGLAVVIVG RKDSQ+YV+ K
Sbjct:     1 MASSSDHTAKIIDGKAIAHTIRSEIAEEVRGLSEKHGKVPGLAVVIVGSRKDSQTYVNTK 60

Query:    61 RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEI 120
             RKACAEVGIKSFD+ LPE+VSEA+LISKVHELN  PDVHGILVQLPLPKHINEE +LG I
Sbjct:    61 RKACAEVGIKSFDVGLPEEVSEADLISKVHELNSNPDVHGILVQLPLPKHINEEHILGAI 120

Query:   121 SLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVG 180
             S++KDVDGFHPLNIGKLAMKGR+PLFLPCTPKGCLELL RSGV IKG+RAVVVGRSNIVG
Sbjct:   121 SIDKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLARSGVKIKGQRAVVVGRSNIVG 180

Query:   181 LPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
             LPVSLLLLKADATVT VHSHT DPE+I+READIVIAA GQA M+
Sbjct:   181 LPVSLLLLKADATVTTVHSHTKDPEAIIREADIVIAACGQAHMI 224

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2127113 EMB3127 "EMBRYO DEFECTIVE 3127" [Arabidopsis thaliana (taxid:3702)]

 Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
 Identities = 136/220 (61%), Positives = 170/220 (77%)

Query:     5 SDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKAC 64
             S+  A +IDGKAVA+ IR EI  EV  + E  G +PGLAV++VG RKDS +YV  K+KAC
Sbjct:    65 SEGGAIVIDGKAVAKKIRDEITIEVSRMKESIGVIPGLAVILVGDRKDSATYVRNKKKAC 124

Query:    65 AEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEK 124
               VGIKSF++ L E  SE E++  V   N  P VHGILVQLPLP H++E+ +L  +S+EK
Sbjct:   125 DSVGIKSFEVRLAEDSSEEEVLKSVSGFNDDPSVHGILVQLPLPSHMDEQNILNAVSIEK 184

Query:   125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVS 184
             DVDGFHPLNIG+LAM+GR+PLF+PCTPKGC+ELL R  + IKGKRAVV+GRSNIVG+P +
Sbjct:   185 DVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNIEIKGKRAVVIGRSNIVGMPAA 244

Query:   185 LLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
             LLL + DATV+I+HS T +PE I READI+I+A GQ  MV
Sbjct:   245 LLLQREDATVSIIHSRTKNPEEITREADIIISAVGQPNMV 284

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2064143 AT2G38660 [Arabidopsis thaliana (taxid:3702)]

 Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
 Identities = 131/215 (60%), Positives = 167/215 (77%)

Query:     5 SDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKAC 64
             ++QK  +IDG  +A+ IR++I  EV  + +  GKVPGLAVV+VG ++DSQ+YV  K KAC
Sbjct:    59 TEQKTVVIDGNVIAEEIRTKIISEVGKMKKAVGKVPGLAVVLVGEQRDSQTYVRNKIKAC 118

Query:    65 AEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEK 124
              E GIKS   +LPE  +E ++IS + + N    +HGILVQLPLP+H+NE K+L  + LEK
Sbjct:   119 EETGIKSVLAELPEDCTEGQIISVLRKFNEDTSIHGILVQLPLPQHLNESKILNMVRLEK 178

Query:   125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVS 184
             DVDGFHPLN+G LAM+GR+PLF+ CTPKGC+ELL R+GV I GK AVV+GRSNIVGLP+S
Sbjct:   179 DVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGRSNIVGLPMS 238

Query:   185 LLLLKADATVTIVHSHTTDPESIVREADIVIAAAG 219
             LLL + DATV+ VH+ T DPE I R+ADIVIAAAG
Sbjct:   239 LLLQRHDATVSTVHAFTKDPEHITRKADIVIAAAG 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

DICTYBASE|DDB_G0283121 DDB_G0283121 "methenyl tetrahydrofolate cyclohydrolase / NADP-dependent methylene H4F dehydrogenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 123/214 (57%), Positives = 156/214 (72%)

Query:    11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
             IIDGK ++  ++  I +E+ L+ EK  + P L V++VG RKDSQ+YV  K+K  +++GI 
Sbjct:    10 IIDGKEISSQVKESIKDEITLMKEKGLRAPCLVVILVGDRKDSQTYVRNKKKTASDLGIN 69

Query:    71 SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
             S DI LPEQ ++ ELI  V   +   DV GILVQLPLP HINEE +L +I   KDVDGFH
Sbjct:    70 SIDILLPEQTTQQELIDLVQSYSKKDDVDGILVQLPLPSHINEEIILTQIDESKDVDGFH 129

Query:   131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
             P+NIGKLAM+GR   F PCTPKGC+E+L RSG+ I GK AVV+GRSNIVGLPVS+LLL  
Sbjct:   130 PVNIGKLAMRGRKADFEPCTPKGCIEMLDRSGIEIAGKNAVVLGRSNIVGLPVSMLLLSR 189

Query:   191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
             DATVTI HS T + +   READI++ A G+A +V
Sbjct:   190 DATVTICHSKTPNLKEKCREADILVVAIGKAKLV 223

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA;ISS

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA;IBA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IBA

GO:0005829 "cytosol" evidence=IBA

GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=IBA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

TIGR_CMR|GSU_0862 GSU_0862 "folD bifunctional protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 113/216 (52%), Positives = 150/216 (69%)

Query:     9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
             ATIIDGKA+A+ IR+++A +V+ L  + G  PGLA V+VG    S+ YV MK  AC ++G
Sbjct:     2 ATIIDGKAIAEKIRADLAAQVKELQSR-GITPGLATVLVGSDPASEVYVRMKGDACNKLG 60

Query:    69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
             + S  I  P + +E EL++ ++ELN  P +HGILVQLPLP  IN ++VL  IS  KDVDG
Sbjct:    61 MHSVKITRPAETTEEELLALINELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDG 120

Query:   129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
             FHP N+G+L + G+ P F PCTP G + +L+ +GV + GK  VVVGRSNIVG PV+L+ L
Sbjct:   121 FHPYNVGRL-VTGK-PTFQPCTPYGVMVMLQEAGVDLAGKEVVVVGRSNIVGKPVALMCL 178

Query:   189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
             + +ATVTI HS T D    VR AD+VIAA G   M+
Sbjct:   179 QRNATVTICHSKTRDLPGRVRAADVVIAAVGVPEMI 214

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=ISS

GO:0004486 "methylenetetrahydrofolate dehydrogenase [NAD(P)+

GO:0009086 "methionine biosynthetic process" evidence=ISS

GO:0009113 "purine nucleobase biosynthetic process" evidence=ISS

GO:0009257 "10-formyltetrahydrofolate biosynthetic process" evidence=ISS

GO:0015940 "pantothenate biosynthetic process" evidence=ISS

SGD|S000003436 ADE3 "Cytoplasmic trifunctional enzyme C1-tetrahydrofolate synthase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 533 (192.7 bits), Expect = 1.6e-50, P = 1.6e-50
 Identities = 109/215 (50%), Positives = 143/215 (66%)

Query:    11 IIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
             ++DGKA AQ  RS IA E++ +     G  P LA++ VG R DS +YV MKRKA  E GI
Sbjct:     5 VLDGKACAQQFRSNIANEIKSIQGHVPGFAPNLAIIQVGNRPDSATYVRMKRKAAEEAGI 64

Query:    70 KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
              +  I L E  +E E++  V +LN  P  HGI+VQLPLP H++E+++   +  EKDVDGF
Sbjct:    65 VANFIHLDESATEFEVLRYVDQLNEDPHTHGIIVQLPLPAHLDEDRITSRVLAEKDVDGF 124

Query:   130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
              P NIG+L  K   P FLPCTPKG +ELL ++ VTI+G R+VV+GRS+IVG PV+ LL  
Sbjct:   125 GPTNIGELNKKNGHPFFLPCTPKGIIELLHKANVTIEGSRSVVIGRSDIVGSPVAELLKS 184

Query:   190 ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
              ++TVTI HS T D  S + +ADIV+ A GQ   V
Sbjct:   185 LNSTVTITHSKTRDIASYLHDADIVVVAIGQPEFV 219

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0006760 "folic acid-containing compound metabolic process" evidence=IMP

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0004329 "formate-tetrahydrofolate ligase activity" evidence=IEA;IMP

GO:0006164 "purine nucleotide biosynthetic process" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

GO:0009086 "methionine biosynthetic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016874 "ligase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000105 "histidine biosynthetic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA;IMP

GO:0009113 "purine nucleobase biosynthetic process" evidence=IMP

GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=IEA;IMP

TIGR_CMR|BA_4405 BA_4405 "methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 109/217 (50%), Positives = 148/217 (68%)

Query:     9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
             A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VG
Sbjct:     3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVG 61

Query:    69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
             I S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDG
Sbjct:    62 IYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDG 121

Query:   129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
             FHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L
Sbjct:   122 FHPISVGRM-MTGQDT-FLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFL 179

Query:   189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
               +ATVT  HS T + + + + ADI+I A G+  MVT
Sbjct:   180 NENATVTYCHSKTQNMKELTKLADILIVAVGRPKMVT 216

GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=ISS

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=ISS

GO:0006760 "folic acid-containing compound metabolic process" evidence=ISS

CGD|CAL0000766 MIS11 [Candida albicans (taxid:5476)]

 Score = 520 (188.1 bits), Expect = 4.2e-49, P = 4.2e-49
 Identities = 108/219 (49%), Positives = 151/219 (68%)

Query:     9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKV-PGLAVVIVGGRKDSQSYVSMKRKACAEV 67
             A +IDGKA+A  +R++I +++     K+ +  P L+++ VG R DS +YV MK KA  E 
Sbjct:     3 AELIDGKAIALDLRTKIHDDIAQFQLKHPEFKPHLSIIQVGDRPDSNTYVKMKLKAAEEA 62

Query:    68 GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127
              I    I LPE +S+ EL+SK+ +LN   DV GILVQLPLP+HI+E K+   +   KDVD
Sbjct:    63 SIGCELIKLPEDISQFELLSKIEKLNNSLDVDGILVQLPLPEHIDETKITDAVLANKDVD 122

Query:   128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLL 187
             GF P N+G+LA KG +PLFLPCTPKG + L ++S + ++GK  VV+GRS+IVG P++ LL
Sbjct:   123 GFGPFNVGELAKKGGEPLFLPCTPKGIMHLFEKSKIDLEGKDVVVLGRSDIVGKPIARLL 182

Query:   188 LKADATVTIVHSHTT-DP-ESIVREADIVIAAAGQAMMV 224
              KA+A VT+VHS T  D  ++ + +ADIV+AA GQ   V
Sbjct:   183 TKANANVTVVHSKTPLDKLKNYLGDADIVVAAIGQPQFV 221

GO:0006546 "glycine catabolic process" evidence=NAS

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA

GO:0046656 "folic acid biosynthetic process" evidence=IEA

GO:0009257 "10-formyltetrahydrofolate biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA

GO:0003697 "single-stranded DNA binding" evidence=IEA

GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=IEA

GO:0004329 "formate-tetrahydrofolate ligase activity" evidence=IEA

GO:0004479 "methionyl-tRNA formyltransferase activity" evidence=IEA

UNIPROTKB|Q59SM8 MIS11 "Likely C1-tetrahydrofolate synthase" [Candida albicans SC5314 (taxid:237561)]

 Score = 520 (188.1 bits), Expect = 4.2e-49, P = 4.2e-49
 Identities = 108/219 (49%), Positives = 151/219 (68%)

Query:     9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKV-PGLAVVIVGGRKDSQSYVSMKRKACAEV 67
             A +IDGKA+A  +R++I +++     K+ +  P L+++ VG R DS +YV MK KA  E 
Sbjct:     3 AELIDGKAIALDLRTKIHDDIAQFQLKHPEFKPHLSIIQVGDRPDSNTYVKMKLKAAEEA 62

Query:    68 GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127
              I    I LPE +S+ EL+SK+ +LN   DV GILVQLPLP+HI+E K+   +   KDVD
Sbjct:    63 SIGCELIKLPEDISQFELLSKIEKLNNSLDVDGILVQLPLPEHIDETKITDAVLANKDVD 122

Query:   128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLL 187
             GF P N+G+LA KG +PLFLPCTPKG + L ++S + ++GK  VV+GRS+IVG P++ LL
Sbjct:   123 GFGPFNVGELAKKGGEPLFLPCTPKGIMHLFEKSKIDLEGKDVVVLGRSDIVGKPIARLL 182

Query:   188 LKADATVTIVHSHTT-DP-ESIVREADIVIAAAGQAMMV 224
              KA+A VT+VHS T  D  ++ + +ADIV+AA GQ   V
Sbjct:   183 TKANANVTVVHSKTPLDKLKNYLGDADIVVAAIGQPQFV 221

GO:0006546 "glycine catabolic process" evidence=NAS

TIGR_CMR|SO_1792 SO_1792 "methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 108/212 (50%), Positives = 139/212 (65%)

Query:     9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
             A IIDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG
Sbjct:     3 AQIIDGKAIAQSIRTQLREQVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVG 62

Query:    69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
               S   DL    SEAEL++ + +LN  P + GILVQLPLP HI + KV+  I  +KDVDG
Sbjct:    63 FISRSYDLDTSCSEAELLALIDQLNDDPSIDGILVQLPLPAHIEDSKVIERIRPDKDVDG 122

Query:   129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
             FHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL
Sbjct:   123 FHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELL 180

Query:   189 KADATVTIVHSHTTDPESIVREADIVIAAAGQ 220
              A  T T  H  T + E  +R+AD+V+ A G+
Sbjct:   181 LAGCTTTTCHRFTKNLEQKIRQADLVVVAVGK 212

GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=ISS

GO:0004486 "methylenetetrahydrofolate dehydrogenase [NAD(P)+

GO:0006760 "folic acid-containing compound metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q71ZW2	FOLD_LISMF	3, ., 5, ., 4, ., 9	0.5560	0.9213	0.7429	yes	no
Q75TC1	FOLD_GEOKA	3, ., 5, ., 4, ., 9	0.5324	0.9301	0.75	yes	no
O67736	FOLD_AQUAE	3, ., 5, ., 4, ., 9	0.5071	0.9170	0.7216	yes	no
A1AL91	FOLD_PELPD	3, ., 5, ., 4, ., 9	0.5555	0.9301	0.7526	yes	no
B8DFW8	FOLD_LISMH	3, ., 5, ., 4, ., 9	0.5560	0.9213	0.7429	yes	no
A7I254	FOLD_CAMHC	3, ., 5, ., 4, ., 9	0.5095	0.9039	0.7288	yes	no
Q1II76	FOLD_KORVE	3, ., 5, ., 4, ., 9	0.5069	0.9344	0.6970	yes	no
Q0KBW5	FOLD_CUPNH	3, ., 5, ., 4, ., 9	0.5207	0.9344	0.7561	yes	no
A5GAM5	FOLD_GEOUR	3, ., 5, ., 4, ., 9	0.5601	0.9301	0.7607	yes	no
C1L2R6	FOLD_LISMC	3, ., 5, ., 4, ., 9	0.5560	0.9213	0.7429	yes	no
Q8Y7C5	FOLD_LISMO	3, ., 5, ., 4, ., 9	0.5560	0.9213	0.7429	yes	no
Q92BZ4	FOLD_LISIN	3, ., 5, ., 4, ., 9	0.5560	0.9213	0.7429	yes	no
C0ZC05	FOLD_BREBN	3, ., 5, ., 4, ., 9	0.5416	0.9301	0.75	yes	no
B9M769	FOLD_GEOSF	3, ., 5, ., 4, ., 9	0.5509	0.9301	0.7607	yes	no
A3DEE6	FOLD_CLOTH	3, ., 5, ., 4, ., 9	0.5070	0.9170	0.7368	yes	no
A0AIG1	FOLD_LISW6	3, ., 5, ., 4, ., 9	0.5467	0.9213	0.7429	yes	no
Q39WH4	FOLD2_GEOMG	3, ., 5, ., 4, ., 9	0.5555	0.9301	0.7473	yes	no
Q74EU7	FOLD2_GEOSL	3, ., 5, ., 4, ., 9	0.5231	0.9301	0.7473	yes	no
B1HRX9	FOLD_LYSSC	3, ., 5, ., 4, ., 9	0.5161	0.9344	0.7535	yes	no
Q472L4	FOLD_CUPPJ	3, ., 5, ., 4, ., 9	0.5207	0.9344	0.7561	yes	no
Q1WUJ3	FOLD_LACS1	3, ., 5, ., 4, ., 9	0.5231	0.9301	0.7473	yes	no
A0LE04	FOLD_MAGSM	3, ., 5, ., 4, ., 9	0.5648	0.9344	0.7508	yes	no
B3R4L6	FOLD_CUPTR	3, ., 5, ., 4, ., 9	0.5207	0.9344	0.7561	yes	no
A4IQS0	FOLD_GEOTN	3, ., 5, ., 4, ., 9	0.5555	0.9301	0.75	yes	no
Q2RIB4	FOLD_MOOTA	3, ., 5, ., 4, ., 9	0.5458	0.9301	0.7607	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.4.9	0.914
3rd Layer	3.5.4	0.921
3rd Layer	1.5.1	0.921
4th Layer	1.5.1.5	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	229
PLN02516	299	PLN02516, PLN02516, methylenetetrahydrofolate dehy	1e-147
PLN02616	364	PLN02616, PLN02616, tetrahydrofolate dehydrogenase	1e-101
PLN02897	345	PLN02897, PLN02897, tetrahydrofolate dehydrogenase	1e-100
COG0190	283	COG0190, FolD, 5,10-methylene-tetrahydrofolate deh	8e-98
PRK10792	285	PRK10792, PRK10792, bifunctional 5,10-methylene-te	3e-91
PRK14190	284	PRK14190, PRK14190, bifunctional 5,10-methylene-te	1e-87
PRK14188	296	PRK14188, PRK14188, bifunctional 5,10-methylene-te	1e-86
PRK14189	285	PRK14189, PRK14189, bifunctional 5,10-methylene-te	1e-85
PRK14179	284	PRK14179, PRK14179, bifunctional 5,10-methylene-te	1e-78
PRK14191	285	PRK14191, PRK14191, bifunctional 5,10-methylene-te	5e-76
PRK14193	284	PRK14193, PRK14193, bifunctional 5,10-methylene-te	1e-75
PRK14186	297	PRK14186, PRK14186, bifunctional 5,10-methylene-te	1e-75
PRK14184	286	PRK14184, PRK14184, bifunctional 5,10-methylene-te	3e-74
PRK14174	295	PRK14174, PRK14174, bifunctional 5,10-methylene-te	1e-73
PRK14167	297	PRK14167, PRK14167, bifunctional 5,10-methylene-te	3e-70
PRK14185	293	PRK14185, PRK14185, bifunctional 5,10-methylene-te	5e-70
PRK14176	287	PRK14176, PRK14176, bifunctional 5,10-methylene-te	3e-68
PRK14194	301	PRK14194, PRK14194, bifunctional 5,10-methylene-te	4e-68
PRK14170	284	PRK14170, PRK14170, bifunctional 5,10-methylene-te	4e-68
PRK14178	279	PRK14178, PRK14178, bifunctional 5,10-methylene-te	3e-67
PRK14168	297	PRK14168, PRK14168, bifunctional 5,10-methylene-te	2e-66
PRK14183	281	PRK14183, PRK14183, bifunctional 5,10-methylene-te	5e-66
PRK14187	294	PRK14187, PRK14187, bifunctional 5,10-methylene-te	1e-65
PRK14192	283	PRK14192, PRK14192, bifunctional 5,10-methylene-te	8e-65
PRK14175	286	PRK14175, PRK14175, bifunctional 5,10-methylene-te	2e-64
PRK14172	278	PRK14172, PRK14172, bifunctional 5,10-methylene-te	3e-64
PRK14182	282	PRK14182, PRK14182, bifunctional 5,10-methylene-te	9e-62
PRK14173	287	PRK14173, PRK14173, bifunctional 5,10-methylene-te	1e-60
PRK14171	288	PRK14171, PRK14171, bifunctional 5,10-methylene-te	1e-59
PRK14180	282	PRK14180, PRK14180, bifunctional 5,10-methylene-te	5e-59
PRK14177	284	PRK14177, PRK14177, bifunctional 5,10-methylene-te	4e-58
PRK14166	282	PRK14166, PRK14166, bifunctional 5,10-methylene-te	5e-58
PRK14169	282	PRK14169, PRK14169, bifunctional 5,10-methylene-te	4e-55
PRK14181	287	PRK14181, PRK14181, bifunctional 5,10-methylene-te	3e-53
pfam00763	117	pfam00763, THF_DHG_CYH, Tetrahydrofolate dehydroge	3e-51
cd01080	168	cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding	3e-47
pfam02882	160	pfam02882, THF_DHG_CYH_C, Tetrahydrofolate dehydro	6e-46
cd05212	140	cd05212, NAD_bind_m-THF_DH_Cyclohyd_like, NAD(P) b	3e-13
cd01079	197	cd01079, NAD_bind_m-THF_DH, NAD binding domain of	7e-05

>gnl|CDD|178131 PLN02516, PLN02516, methylenetetrahydrofolate dehydrogenase (NADP+)

 Score =  412 bits (1061), Expect = e-147
 Identities = 195/224 (87%), Positives = 209/224 (93%)

Query: 1   MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMK 60
           MA+PSD  A IIDGKA+A+ IRSEIAEEV  LSEK+GKVPGLAVVIVG RKDSQ+YV+MK
Sbjct: 1   MASPSDHVAQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMK 60

Query: 61  RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEI 120
           RKACAEVGIKSFD+DLPE +SEAELISKVHELN  PDVHGILVQLPLPKHINEEK+L EI
Sbjct: 61  RKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEI 120

Query: 121 SLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVG 180
           SLEKDVDGFHPLNIGKLAMKGR+PLFLPCTPKGCLELL RSG+ IKGK+AVVVGRSNIVG
Sbjct: 121 SLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVG 180

Query: 181 LPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           LPVSLLLLKADATVT+VHS T DPESIVREADIVIAAAGQAMM+
Sbjct: 181 LPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAAAGQAMMI 224

Length = 299

>gnl|CDD|215332 PLN02616, PLN02616, tetrahydrofolate dehydrogenase/cyclohydrolase, putative

 Score =  296 bits (759), Expect = e-101
 Identities = 137/220 (62%), Positives = 170/220 (77%)

Query: 5   SDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKAC 64
           S+  A +IDGKAVA+ IR EI  EV  + E  G VPGLAV++VG RKDS +YV  K+KAC
Sbjct: 69  SEGGAKVIDGKAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKAC 128

Query: 65  AEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEK 124
             VGI SF++ LPE  +E E++  +   N  P VHGILVQLPLP H++E+ +L  +S+EK
Sbjct: 129 DSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEK 188

Query: 125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVS 184
           DVDGFHPLNIG+LAM+GR+PLF+PCTPKGC+ELL R  V IKGKRAVV+GRSNIVG+P +
Sbjct: 189 DVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAA 248

Query: 185 LLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           LLL + DATV+IVHS T +PE I READI+I+A GQ  MV
Sbjct: 249 LLLQREDATVSIVHSRTKNPEEITREADIIISAVGQPNMV 288

Length = 364

>gnl|CDD|178485 PLN02897, PLN02897, tetrahydrofolate dehydrogenase/cyclohydrolase, putative

 Score =  294 bits (753), Expect = e-100
 Identities = 133/220 (60%), Positives = 171/220 (77%)

Query: 5   SDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKAC 64
           ++QK  +IDG  +A+ IR++IA EVR + +  GKVPGLAVV+VG ++DSQ+YV  K KAC
Sbjct: 52  TEQKTVVIDGNVIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKAC 111

Query: 65  AEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEK 124
            E GIKS   +LPE  +E +++S + + N    +HGILVQLPLP+H++E K+L  + LEK
Sbjct: 112 EETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLPQHLDESKILNMVRLEK 171

Query: 125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVS 184
           DVDGFHPLN+G LAM+GR+PLF+ CTPKGC+ELL RSGV I GK AVV+GRSNIVGLP+S
Sbjct: 172 DVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMS 231

Query: 185 LLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           LLL + DATV+ VH+ T DPE I R+ADIVIAAAG   +V
Sbjct: 232 LLLQRHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLV 271

Length = 345

>gnl|CDD|223268 COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

 Score =  285 bits (733), Expect = 8e-98
 Identities = 119/216 (55%), Positives = 152/216 (70%), Gaps = 2/216 (0%)

Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
            IIDGKA+A+ IR E+ E+V  L  K G  PGLAV++VG    SQ YV  K+KA  E+GI
Sbjct: 1   MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGI 60

Query: 70  KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
            S   DLPE ++E EL++ + ELN  P+V GILVQLPLPKH++E+K+L  I  EKDVDGF
Sbjct: 61  ASELYDLPEDITEEELLALIDELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGF 120

Query: 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
           HP N+GKLA    +P FLPCTP G + LL+  G+ ++GK  VVVGRSNIVG P++LLLL 
Sbjct: 121 HPYNLGKLA--QGEPGFLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLN 178

Query: 190 ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           A+ATVT+ HS T D  SI + ADIV+ A G+   + 
Sbjct: 179 ANATVTVCHSRTKDLASITKNADIVVVAVGKPHFIK 214

Length = 283

>gnl|CDD|236760 PRK10792, PRK10792, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  269 bits (690), Expect = 3e-91
 Identities = 114/216 (52%), Positives = 143/216 (66%), Gaps = 2/216 (0%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG    SQ YV+ KRKAC EVG
Sbjct: 3   AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVG 62

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
             S   DLPE  SEAEL++ + ELN  P + GILVQLPLP HI+  KVL  I  +KDVDG
Sbjct: 63  FVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDG 122

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP N+G+LA   R PL  PCTP+G + LL+R G+   G  AVVVG SNIVG P+SL LL
Sbjct: 123 FHPYNVGRLAQ--RIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELL 180

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
            A  TVT+ H  T +    VR AD+++ A G+   +
Sbjct: 181 LAGCTVTVCHRFTKNLRHHVRNADLLVVAVGKPGFI 216

Length = 285

>gnl|CDD|184560 PRK14190, PRK14190, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  260 bits (666), Expect = 1e-87
 Identities = 112/217 (51%), Positives = 146/217 (67%), Gaps = 3/217 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A IIDGK VA+  R ++ EEV  L E+ G VPGLAV++VG    S SYV  K+KA  +VG
Sbjct: 3   AVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKVG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I S   + P  ++E EL++ +  LN  P ++GILVQLPLPKHI+E+ V+  IS EKDVDG
Sbjct: 62  IYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP+N+G++ +      FLPCTP G LELLK   + I GK  VVVGRSNIVG PV  LLL
Sbjct: 122 FHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLL 179

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
             +ATVT  HS T +   + ++ADI+I A G+  ++T
Sbjct: 180 NENATVTYCHSKTKNLAELTKQADILIVAVGKPKLIT 216

Length = 284

>gnl|CDD|184558 PRK14188, PRK14188, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  257 bits (660), Expect = 1e-86
 Identities = 110/216 (50%), Positives = 142/216 (65%), Gaps = 2/216 (0%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           ATIIDGKA A  +R+ +A EV  L   +G  PGLAVV+VG    SQ YV  K K   E G
Sbjct: 2   ATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           + SF+  LP   S+AEL++ +  LN  P +HGILVQLPLPKH++ E V+  I  EKDVDG
Sbjct: 62  MASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
            H +N G+LA    +   +PCTP GC+ LL+R    + G  AVV+GRSN+VG P++ LLL
Sbjct: 122 LHVVNAGRLA--TGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLL 179

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
            A+ATVTI HS T D  ++ R ADI++AA G+  MV
Sbjct: 180 AANATVTIAHSRTRDLPAVCRRADILVAAVGRPEMV 215

Length = 296

>gnl|CDD|184559 PRK14189, PRK14189, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  255 bits (653), Expect = 1e-85
 Identities = 110/217 (50%), Positives = 150/217 (69%), Gaps = 3/217 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A +IDG A+++ +R+E A+    L+ + G  PGLAV++VG    SQ YV  K KAC + G
Sbjct: 3   AQLIDGNALSKQLRAEAAQRAAALTAR-GHQPGLAVILVGDNPASQVYVRNKVKACEDNG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
             S     P  +SEAEL++++ ELN  P +HGILVQLPLPKHI+  KV+  I+ EKDVDG
Sbjct: 62  FHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FH  N G L M G+ PLF PCTP G +++L+  G+ ++G  AVV+GRSNIVG P+++LLL
Sbjct: 122 FHVANAGAL-MTGQ-PLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLL 179

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           +A ATVTI HS T D  +  R+ADIV+AA G+  ++T
Sbjct: 180 QAGATVTICHSKTRDLAAHTRQADIVVAAVGKRNVLT 216

Length = 285

>gnl|CDD|237634 PRK14179, PRK14179, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  237 bits (606), Expect = 1e-78
 Identities = 109/217 (50%), Positives = 146/217 (67%), Gaps = 2/217 (0%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
             IIDGKA+AQ +++E+AE+V  L E+ G VPGL V++VG    SQ YV  K ++    G
Sbjct: 2   TEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
            KS  + LPE +S+ EL+  +   N  P  HGILVQLPLPKHINEEK+L  I  +KDVDG
Sbjct: 62  FKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP+N G L   GR P+ +PCTP G +E+ +   V ++GK AVV+GRSNIVG P++ LLL
Sbjct: 122 FHPMNTGHL-WSGR-PVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLL 179

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
             +ATVT+ HS T +   + R+ADI++ A G+   VT
Sbjct: 180 DKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVT 216

Length = 284

>gnl|CDD|172679 PRK14191, PRK14191, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  230 bits (589), Expect = 5e-76
 Identities = 97/216 (44%), Positives = 139/216 (64%), Gaps = 2/216 (0%)

Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
            ++DGKA++  I  ++  ++++L+ + GK P LAV++VG    SQ+YV+MK KAC  VG+
Sbjct: 2   VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGM 61

Query: 70  KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
            S    L E  +EAEL+S + +LN   ++ GILVQLPLP+HI+ + VL  I   KDVDGF
Sbjct: 62  DSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGF 121

Query: 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
           HPLNIGKL     D  F+P TP G + LLK   + IKGK  V++G SNIVG P+++L+L 
Sbjct: 122 HPLNIGKLC-SQLDG-FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLN 179

Query: 190 ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           A A+V++ H  T D     + ADIV    G+  ++ 
Sbjct: 180 AGASVSVCHILTKDLSFYTQNADIVCVGVGKPDLIK 215

Length = 285

>gnl|CDD|237637 PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  229 bits (586), Expect = 1e-75
 Identities = 104/219 (47%), Positives = 136/219 (62%), Gaps = 5/219 (2%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A I+DGKA A  I++++AE V  L EK G  PGL  V+VG    SQ+YV  K + CAEVG
Sbjct: 3   AIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAEVG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I S   DLP   ++ EL + + ELN  P   G +VQLPLPKH++E  VL  I   KD DG
Sbjct: 62  ITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
            HP N+G+L +    P  LPCTP+G + LL+R  V + G   VV+GR   VG P+ LLL 
Sbjct: 122 LHPTNLGRLVLNEPAP--LPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLT 179

Query: 189 K--ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           +   +ATVT+ H+ T D  +  R ADI++AAAG A +VT
Sbjct: 180 RRSENATVTLCHTGTRDLAAHTRRADIIVAAAGVAHLVT 218

Length = 284

>gnl|CDD|237636 PRK14186, PRK14186, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  229 bits (587), Expect = 1e-75
 Identities = 107/217 (49%), Positives = 142/217 (65%), Gaps = 2/217 (0%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A I+DGKA+A  I   +  ++     K G+ PGLAV+ VG    S  YV  K KACA VG
Sbjct: 2   ALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I SF   LP   S+AE+ + + +LN    V GIL+QLPLPKH++E  +L  I  +KD DG
Sbjct: 62  IASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
            HPLN+G+L +KG +P    CTP G + LL+   + I GK+AVVVGRS +VG P++L+LL
Sbjct: 122 LHPLNLGRL-VKG-EPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLL 179

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
            A+ATVTI HS T D  SI READI++AAAG+  ++ 
Sbjct: 180 AANATVTIAHSRTQDLASITREADILVAAAGRPNLIG 216

Length = 297

>gnl|CDD|237635 PRK14184, PRK14184, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  226 bits (577), Expect = 3e-74
 Identities = 106/219 (48%), Positives = 141/219 (64%), Gaps = 6/219 (2%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           ++DGKA A TIR E+  EV  L+ ++G+ PGLAV++VG    SQ YV  K +AC + GI 
Sbjct: 3   LLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIV 62

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S    LP   ++ EL   + ELN  PD+ GIL+QLPLPK ++ ++ L  I   KDVDGFH
Sbjct: 63  SEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFH 122

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK- 189
           P N+G+LA+    P F PCTP G + LL+R G++  GK+AVVVGRSNIVG P++L+L   
Sbjct: 123 PENMGRLALG--LPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAP 180

Query: 190 ---ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
              A+ATVT+ HS T D     READ +  A G+   VT
Sbjct: 181 GKFANATVTVCHSRTPDLAEECREADFLFVAIGRPRFVT 219

Length = 286

>gnl|CDD|172662 PRK14174, PRK14174, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  225 bits (574), Expect = 1e-73
 Identities = 112/220 (50%), Positives = 141/220 (64%), Gaps = 4/220 (1%)

Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
            IIDGK V+  +++E+   V     K GKVPGL V+IVG    SQ YV  K K+C E+G+
Sbjct: 2   LIIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGM 61

Query: 70  KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
            S  I+LP   +E  L+ K+ +LN  PDVHGILVQ PLPK I+E  V   I   KDVDGF
Sbjct: 62  NSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGF 121

Query: 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
           HP N+G+L M   D  F+ CTP G LELL R  +  KGK  VVVGRSNIVG P++ L+L+
Sbjct: 122 HPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQ 181

Query: 190 ----ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
               ++ TVTI HS T D  S  R+ADI+IAA G+A  +T
Sbjct: 182 KLKESNCTVTICHSATKDIPSYTRQADILIAAIGKARFIT 221

Length = 295

>gnl|CDD|184549 PRK14167, PRK14167, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  216 bits (551), Expect = 3e-70
 Identities = 102/221 (46%), Positives = 139/221 (62%), Gaps = 7/221 (3%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
             IIDG AVA  IR ++ + +  L +  G  PGLA V++     S++YVSMK++ C EVG
Sbjct: 2   TEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVG 60

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I++ D+++       EL   + ELN   DVHGILVQ+P+P H+++ +VL  I   KDVDG
Sbjct: 61  IEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDG 120

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVS-LLL 187
           FHP N+G+L     D  F PCTP G  +LL  +GV  +G   VVVGRS+IVG P++ LL+
Sbjct: 121 FHPENVGRLV--AGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLI 178

Query: 188 LKAD---ATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
            KAD   ATVT+ HS T D  +  R ADIV+AAAG   ++ 
Sbjct: 179 QKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPELID 219

Length = 297

>gnl|CDD|184556 PRK14185, PRK14185, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  215 bits (550), Expect = 5e-70
 Identities = 106/220 (48%), Positives = 143/220 (65%), Gaps = 6/220 (2%)

Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
            +IDGKA++  I+ EIA EV  +  K GK P LA ++VG    S++YV+ K KAC E G 
Sbjct: 2   QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGF 61

Query: 70  KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
           KS  I     V+E EL++KV ELN   DV G +VQLPLPKHI+E+KV+  I   KDVDGF
Sbjct: 62  KSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121

Query: 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
           HP+N+G++++    P F+  TP G LELLKR  +   GK+ VV+GRSNIVG P++ L+++
Sbjct: 122 HPINVGRMSIG--LPCFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQ 179

Query: 190 ----ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
                D TVT+ HS + + +    EADI+IAA GQ   V 
Sbjct: 180 KAYPGDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVK 219

Length = 293

>gnl|CDD|184553 PRK14176, PRK14176, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  210 bits (537), Expect = 3e-68
 Identities = 96/216 (44%), Positives = 135/216 (62%), Gaps = 2/216 (0%)

Query: 4   PSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKA 63
               ++ IIDGKA+A+ I +E+   V  L    G  PGLA ++VG    S+ YV +K KA
Sbjct: 3   DESYESRIIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKA 62

Query: 64  CAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLE 123
           C  VGI++ D  LP   ++ EL+  +  LN   DVHGIL+QLPLPKH++ ++ +  I   
Sbjct: 63  CERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPA 122

Query: 124 KDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPV 183
           KD DGFHP N+GKL M G D   +PCTP G +  L+  GV I+GK AV+VG SN+VG P+
Sbjct: 123 KDADGFHPYNMGKL-MIG-DEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPM 180

Query: 184 SLLLLKADATVTIVHSHTTDPESIVREADIVIAAAG 219
           + +LL  +ATV++ H  T D +    +ADI++ A G
Sbjct: 181 AAMLLNRNATVSVCHVFTDDLKKYTLDADILVVATG 216

Length = 287

>gnl|CDD|172682 PRK14194, PRK14194, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  211 bits (538), Expect = 4e-68
 Identities = 107/221 (48%), Positives = 147/221 (66%), Gaps = 3/221 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A +IDGKA A  + +++ E+VR L    G  P LAV++VG    SQ YV  K     E G
Sbjct: 4   AKLIDGKAAAARVLAQVREDVRTLKAA-GIEPALAVILVGNDPASQVYVRNKILRAEEAG 62

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I+S +  LP   S+A L++ + ELN  P V+GIL+QLPLP HI+E +VL  I+  KDVDG
Sbjct: 63  IRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDG 122

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FH  N+G L+ +GRD L  PCTP GCL LL+ +   + GK AVV+GRSNIVG P++ LLL
Sbjct: 123 FHSENVGGLS-QGRDVL-TPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLL 180

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229
           +A  +VT+VHS +TD +++ R+ADIV+AA G+  ++    L
Sbjct: 181 QAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWL 221

Length = 301

>gnl|CDD|172658 PRK14170, PRK14170, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  210 bits (536), Expect = 4e-68
 Identities = 119/214 (55%), Positives = 155/214 (72%), Gaps = 3/214 (1%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+K
Sbjct: 4   IIDGKKLAKEIQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFH
Sbjct: 63  SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFH 122

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
           P+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           +ATVTI HS T D   + +EADI++ A G A  V
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFV 214

Length = 284

>gnl|CDD|172666 PRK14178, PRK14178, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  208 bits (530), Expect = 3e-67
 Identities = 107/216 (49%), Positives = 144/216 (66%), Gaps = 6/216 (2%)

Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
            I+DGKAV++     + EE+     + G  P LA VIVG    SQ YV MK +AC  VGI
Sbjct: 1   MILDGKAVSEKRLELLKEEI----IESGLYPRLATVIVGDDPASQMYVRMKHRACERVGI 56

Query: 70  KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
            S  I+LP   +   ++ ++  LN  PD++GILVQLPLPK ++ E+V+  I  EKDVDGF
Sbjct: 57  GSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGF 116

Query: 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
           HPLN+G+L + G  P F PCTP G + LL    ++I GKRAVVVGRS  VG P++ LLL 
Sbjct: 117 HPLNLGRL-VSGL-PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLN 174

Query: 190 ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           ADATVTI HS T + ++ +R+ADI+++AAG+A  +T
Sbjct: 175 ADATVTICHSKTENLKAELRQADILVSAAGKAGFIT 210

Length = 279

>gnl|CDD|237633 PRK14168, PRK14168, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  206 bits (526), Expect = 2e-66
 Identities = 103/215 (47%), Positives = 137/215 (63%), Gaps = 4/215 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A II G  + + I  EI  EV  L EKYGKVPGL  ++VG    S SYV++K K    +G
Sbjct: 3   AKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLG 62

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
                 +    ++E EL++ + + N    +HGILVQLPLPKHINE+KVL  I  +KDVDG
Sbjct: 63  FHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDG 122

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP+N+G+L + G +  FLPCTP G  E+L RSGV   G   VVVGRSNIVG P++ ++ 
Sbjct: 123 FHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMT 182

Query: 189 K----ADATVTIVHSHTTDPESIVREADIVIAAAG 219
           +    A+ATVTIVH+ + +     + ADI+I AAG
Sbjct: 183 QKGPGANATVTIVHTRSKNLARHCQRADILIVAAG 217

Length = 297

>gnl|CDD|184555 PRK14183, PRK14183, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  205 bits (522), Expect = 5e-66
 Identities = 101/216 (46%), Positives = 141/216 (65%), Gaps = 2/216 (0%)

Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
            I+DGKA++  I+  + +EV  L      VPGLAV++VG    S +YV MK KAC  VGI
Sbjct: 2   QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGI 61

Query: 70  KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
            S   ++P  +S+ E++  +  +N  P++ GILVQLPLPKHI+  K+L  I  +KDVDGF
Sbjct: 62  YSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGF 121

Query: 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
           HP N+G+L + G D  F+PCTP G +ELL+   + +KGK   VVG SNIVG P++ LLL 
Sbjct: 122 HPYNVGRL-VTGLDG-FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLN 179

Query: 190 ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           A+ATV I H  T D ++  ++ADIVI   G+  ++T
Sbjct: 180 ANATVDICHIFTKDLKAHTKKADIVIVGVGKPNLIT 215

Length = 281

>gnl|CDD|172675 PRK14187, PRK14187, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  204 bits (521), Expect = 1e-65
 Identities = 96/216 (44%), Positives = 130/216 (60%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
             IIDGK +A  I   +A  +  L  ++   P L V++VG    SQ YV  K++    +G
Sbjct: 2   TNIIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           ++S  I LP  +SE+ LI K++ELN    VHGILVQLP+P HI++  ++  I  EKDVDG
Sbjct: 62  LRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FH  N+G+L    +    +PCTPKGCL L+K     + G  AVV+GRSNIVG P++ LLL
Sbjct: 122 FHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLL 181

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
             + TVT VHS T D      +ADI++AA G    V
Sbjct: 182 GENCTVTTVHSATRDLADYCSKADILVAAVGIPNFV 217

Length = 294

>gnl|CDD|184561 PRK14192, PRK14192, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  201 bits (514), Expect = 8e-65
 Identities = 93/216 (43%), Positives = 138/216 (63%), Gaps = 2/216 (0%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A ++DGKA+A+ I  E++  V  L  K G+ P LA ++VG    S +YV MK  AC  VG
Sbjct: 3   ALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVG 62

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           + S  ++LP++ +  +L++K+ ELN  PDVHGIL+Q P+P  I+E      ISL KDVDG
Sbjct: 63  MDSLKVELPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDG 122

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
              L  G++AM   +  +   TP G + LLK   + + GK AVVVGRS I+G P++++LL
Sbjct: 123 VTCLGFGRMAMG--EAAYGSATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLL 180

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
            A+ATVTI HS T +   +V++ADI++ A G+  ++
Sbjct: 181 NANATVTICHSRTQNLPELVKQADIIVGAVGKPELI 216

Length = 283

>gnl|CDD|184552 PRK14175, PRK14175, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  201 bits (512), Expect = 2e-64
 Identities = 101/217 (46%), Positives = 154/217 (70%), Gaps = 3/217 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A I+DGK +A+  R  + ++V  L EK G  P L+V++VG    SQSYV  K+KA  ++G
Sbjct: 3   AKILDGKQIAKDYRQGLQDQVEALKEK-GFTPKLSVILVGNDGASQSYVRSKKKAAEKIG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           + S  + L E  +E E++++++ LN    V GILVQ+PLPK ++E+K+L  I+ EKDVDG
Sbjct: 62  MISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP+NIGKL +   +  F+PCTP G +E+LK + + ++GK AVV+GRS+IVG PVS LLL
Sbjct: 122 FHPINIGKLYID--EQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLL 179

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           + +A+VTI+HS + D  S +++AD++++A G+  +VT
Sbjct: 180 QKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVT 216

Length = 286

>gnl|CDD|172660 PRK14172, PRK14172, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  200 bits (511), Expect = 3e-64
 Identities = 87/215 (40%), Positives = 131/215 (60%), Gaps = 2/215 (0%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           II+GK VA  I+ EI   V    E    +P +A ++VG    S  Y++ + K    +GI 
Sbjct: 4   IINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGID 63

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
              I L E +SE +LI+++ ELN   +VHGI++QLPLPKH++E+K+  +I   KD+D   
Sbjct: 64  FKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLT 123

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
            +++GK      +  FLPCTP   + L+K   + I+GK  VV+GRSNIVG PV+ LLL  
Sbjct: 124 FISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNE 181

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           +ATVTI HS T + + + ++ADI++ A G+   + 
Sbjct: 182 NATVTICHSKTKNLKEVCKKADILVVAIGRPKFID 216

Length = 278

>gnl|CDD|172670 PRK14182, PRK14182, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  194 bits (494), Expect = 9e-62
 Identities = 109/214 (50%), Positives = 141/214 (65%), Gaps = 2/214 (0%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           +IDGK +A  ++ E+A EVR L+ + G   GL VV VG    S  YV  KRK C EVGI 
Sbjct: 3   LIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGIT 61

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S +  LP   ++AEL++ +  LN  P VHGILVQLPLPKH++E  VL  IS  KD DGFH
Sbjct: 62  SVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFH 121

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
           P N+G L++ G   +  PCTP G + +L  + V  KGKRA+VVGRSNIVG P++++LL+ 
Sbjct: 122 PFNVGALSI-GIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLER 180

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
            ATVTI HS T D    V  ADI++AA G+A +V
Sbjct: 181 HATVTIAHSRTADLAGEVGRADILVAAIGKAELV 214

Length = 282

>gnl|CDD|184551 PRK14173, PRK14173, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  191 bits (488), Expect = 1e-60
 Identities = 97/217 (44%), Positives = 134/217 (61%), Gaps = 6/217 (2%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A  + G   A+ + +E+   +  L      VP L VV +G    S SYV +K +    +G
Sbjct: 3   ARELSGPPAAEAVYAELRARLAKLPF----VPHLRVVRLGEDPASVSYVRLKDRQAKALG 58

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           ++S    LPE  S+ EL+  +  LN  P+V GILVQLPLP HI+ ++VL  I   KDVDG
Sbjct: 59  LRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDG 118

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHPLN+G+L M G + L  PCTP G + LLK  G+ + GK  VVVGRSNIVG P++ LLL
Sbjct: 119 FHPLNVGRLWM-GGEALE-PCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLL 176

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           + DATVT+ HS T D  ++ R AD+++ A G+  ++T
Sbjct: 177 REDATVTLAHSKTQDLPAVTRRADVLVVAVGRPHLIT 213

Length = 287

>gnl|CDD|172659 PRK14171, PRK14171, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  189 bits (480), Expect = 1e-59
 Identities = 95/217 (43%), Positives = 138/217 (63%), Gaps = 1/217 (0%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           IIDGKA+A  I +++  E++ L  +    P LA+V+VG    S  YV  K K   ++GI 
Sbjct: 4   IIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGID 63

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           +  ++L   +   +LISK++ELN+  ++ GI+VQLPLP  I++ K+L  +S  KD+DGFH
Sbjct: 64  TLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFH 123

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
           PLN+G L   G    F+PCT  GCL ++K+    + GK  V++GRSNIVG P+S LLLK 
Sbjct: 124 PLNVGYL-HSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKE 182

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMG 227
           + +VTI HS T +  SI  +ADIV+AA G  + +T  
Sbjct: 183 NCSVTICHSKTHNLSSITSKADIVVAAIGSPLKLTAE 219

Length = 288

>gnl|CDD|172668 PRK14180, PRK14180, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  187 bits (476), Expect = 5e-59
 Identities = 100/216 (46%), Positives = 138/216 (63%), Gaps = 1/216 (0%)

Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
            +IDGK++++ ++  +A +V+         P L  +IVG    S++YV+ K KACA+VGI
Sbjct: 2   ILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGI 61

Query: 70  KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
            S  I LPE  +E+EL+  + +LN    VH ILVQLPLP HIN+  V+  I  EKDVDGF
Sbjct: 62  DSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGF 121

Query: 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
           HP N+G+L ++ +  L   CTPKG + +L+  G+  +G  AVVVG SN+VG PVS LLL 
Sbjct: 122 HPTNVGRLQLRDKKCL-ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLN 180

Query: 190 ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           A ATVT  H  TTD +S   +ADI+I A G+   +T
Sbjct: 181 AKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFIT 216

Length = 282

>gnl|CDD|172665 PRK14177, PRK14177, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  185 bits (470), Expect = 4e-58
 Identities = 97/210 (46%), Positives = 140/210 (66%), Gaps = 2/210 (0%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           ++DGK +++ IR+EI E +     K  ++P LA ++VG    S++YVSMK KAC +VG+ 
Sbjct: 5   LLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMG 64

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S  I L EQ +  EL+  + +LN+ P+V GIL+Q P+P  I+E      I+LEKDVDG  
Sbjct: 65  SEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVT 124

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
            L+ GKL+M      +LPCTP G + LLK  G+ + GK AVVVGRS I+G P+++LL + 
Sbjct: 125 TLSFGKLSMGVE--TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEM 182

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQ 220
           +ATVT+ HS T +  SIVR+ADI++ A G+
Sbjct: 183 NATVTLCHSKTQNLPSIVRQADIIVGAVGK 212

Length = 284

>gnl|CDD|172654 PRK14166, PRK14166, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  184 bits (469), Expect = 5e-58
 Identities = 99/210 (47%), Positives = 138/210 (65%), Gaps = 2/210 (0%)

Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
           T++DGKA++  I+ E+ E+ + L  K G    LAV++VG    SQ+YV  K KAC E GI
Sbjct: 2   TLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGI 60

Query: 70  KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
           KS    L E  ++ EL++ ++ LN    VHGILVQLPLP HI ++ +L  I   KDVDGF
Sbjct: 61  KSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGF 120

Query: 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
           HP+N+G L + G +  FLPCTP G ++LLK   + ++GK AV++G SNIVG P++ +LL 
Sbjct: 121 HPINVGYLNL-GLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLN 179

Query: 190 ADATVTIVHSHTTDPESIVREADIVIAAAG 219
           A ATV++ H  T D     R+AD++I AAG
Sbjct: 180 AGATVSVCHIKTKDLSLYTRQADLIIVAAG 209

Length = 282

>gnl|CDD|184550 PRK14169, PRK14169, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  177 bits (450), Expect = 4e-55
 Identities = 90/212 (42%), Positives = 139/212 (65%), Gaps = 3/212 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           AT +DG+AV++ I +++ + V  L+++    P LAVV+VG    S+ YV  K++   ++G
Sbjct: 1   ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIG 59

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           ++S    LPE  ++A+L++KV ELN  PDV  ILVQLPLP  ++E+ V+  I  +KDVDG
Sbjct: 60  VRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDG 119

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           F P+++G+L     +P  +  TP G + LL    + + GKR V+VGRSNIVG P++ L++
Sbjct: 120 FSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMV 177

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQ 220
             DATVTI HS T + + + +EADI++ A G 
Sbjct: 178 NHDATVTIAHSKTRNLKQLTKEADILVVAVGV 209

Length = 282

>gnl|CDD|172669 PRK14181, PRK14181, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  172 bits (438), Expect = 3e-53
 Identities = 90/219 (41%), Positives = 137/219 (62%), Gaps = 9/219 (4%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           ++ G   A+ I + I E +   S      PGLAVV++G    S+ YV MK K   ++G+ 
Sbjct: 2   LLKGAPAAEHILATIKENISASS----TAPGLAVVLIGNDPASEVYVGMKVKKATDLGMV 57

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S    LP   + ++++  +H LN  P++HGILVQLPLPKH++ + +L  IS +KDVDG H
Sbjct: 58  SKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLH 117

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK- 189
           P+N+GKL + G    F+PCTP G +ELLK   + + G+   +VGRSNIVG P++ LL++ 
Sbjct: 118 PVNMGKLLL-GETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQK 176

Query: 190 ---ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
               +ATVT++HS + +   I++ ADI+IAA G  + + 
Sbjct: 177 HPDTNATVTLLHSQSENLTEILKTADIIIAAIGVPLFIK 215

Length = 287

>gnl|CDD|201431 pfam00763, THF_DHG_CYH, Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

 Score =  161 bits (410), Expect = 3e-51
 Identities = 66/118 (55%), Positives = 83/118 (70%), Gaps = 1/118 (0%)

Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
            I+DGKA+A+ I+ E+ EEV  L EK G  P LAV++VG    SQ YV  KRKA  E+GI
Sbjct: 1   KILDGKALAKKIKEELKEEVAKLKEK-GITPKLAVILVGDDPASQVYVRSKRKAAEELGI 59

Query: 70  KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127
           +S  I LPE ++E EL++ + +LN  P VHGILVQLPLPKHI+E K+L  I  EKDVD
Sbjct: 60  ESELIRLPEDITEEELLALIEKLNADPSVHGILVQLPLPKHIDENKILNAIDPEKDVD 117

Length = 117

>gnl|CDD|133448 cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

 Score =  153 bits (388), Expect = 3e-47
 Identities = 57/103 (55%), Positives = 75/103 (72%), Gaps = 2/103 (1%)

Query: 123 EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLP 182
           EKDVDG HP+N+G+LA+    P F+PCTP G LELLKR G+ + GK+ VVVGRSNIVG P
Sbjct: 2   EKDVDGLHPVNLGRLALG--RPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKP 59

Query: 183 VSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           ++ LLL  +ATVT+ HS T + +   ++ADIVI A G+  +V 
Sbjct: 60  LAALLLNRNATVTVCHSKTKNLKEHTKQADIVIVAVGKPGLVK 102

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well as bifunctional m-THF m-THF DHm-THF DHDH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains the bifunctional DH/cyclohydrolase. M-THF DH, like other amino acid DH-like NAD(P)-binding domains, is a member of the Rossmann fold superfamily which includes glutamate, leucine, and phenylalanine DHs, m-THF DH, methylene-tetrahydromethanopterin DH, m-THF DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. Length = 168

>gnl|CDD|217267 pfam02882, THF_DHG_CYH_C, Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

 Score =  149 bits (379), Expect = 6e-46
 Identities = 52/96 (54%), Positives = 71/96 (73%), Gaps = 2/96 (2%)

Query: 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
           HP+N+G+L +   +P F+PCTP+G +ELLKR G+ + GK  VV+GRSNIVG P++LLLL 
Sbjct: 1   HPINLGRLVL--GEPGFVPCTPRGIMELLKRYGIDLAGKNVVVIGRSNIVGKPLALLLLN 58

Query: 190 ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           A+ATVT+ HS T D   I READIV+ A G+  ++ 
Sbjct: 59  ANATVTVCHSKTKDLAEITREADIVVVAVGKPGLIK 94

Length = 160

>gnl|CDD|133451 cd05212, NAD_bind_m-THF_DH_Cyclohyd_like, NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

 Score = 64.1 bits (156), Expect = 3e-13
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 147 LPCTPKGC-------LELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199
            PCTP           ELL + GV + GK+ +VVGRS IVG P+  LL +  ATV     
Sbjct: 1   GPCTPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDW 60

Query: 200 HTTDPESIVREADIVIAAAGQAMMV 224
            T   +S V +AD+V+  + +   V
Sbjct: 61  KTIQLQSKVHDADVVVVGSPKPEKV 85

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, mono-functional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express a monofunctional DH. M-THF DH, like other amino acid DH-like NAD(P)-binding domains, is a member of the Rossmann fold superfamily which includes glutamate, leucine, and phenylalanine DHs, m-THF DH, methylene-tetrahydromethanopterin DH, m-THF DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 140

>gnl|CDD|133447 cd01079, NAD_bind_m-THF_DH, NAD binding domain of methylene-tetrahydrofolate dehydrogenase

 Score = 42.0 bits (99), Expect = 7e-05
 Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 16/89 (17%)

Query: 122 LEKDVDGFHPLNIGKLAMKGR--DP-----LFLPCTPKG---CLELLK------RSGVTI 165
             KDV+G     I  L    R  DP       LPCTP      LE L         G  +
Sbjct: 1   PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRL 60

Query: 166 KGKRAVVVGRSNIVGLPVSLLLLKADATV 194
            GK   ++ RS +VG P++ LL    A V
Sbjct: 61  YGKTITIINRSEVVGRPLAALLANDGARV 89

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional DHs from S. cerevisiae and certain bacteria. M-THF DH, like other amino acid DH-like NAD(P)-binding domains, is a member of the Rossmann fold superfamily which includes glutamate, leucine, and phenylalanine DHs, m-THF DH, methylene-tetrahydromethanopterin DH, m-THF DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 197

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	229
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	100.0
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	100.0
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	100.0
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	100.0
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
KOG4230	935	consensus C1-tetrahydrofolate synthase [Coenzyme t	100.0
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
KOG0089	309	consensus Methylenetetrahydrofolate dehydrogenase/	100.0
PF00763	117	THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cycloh	100.0
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	100.0
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	100.0
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	99.93
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	99.93
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	99.5
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	99.47
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	99.46
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	99.44
PRK12548	289	shikimate 5-dehydrogenase; Provisional	99.42
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	99.4
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	99.38
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	99.37
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	99.36
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	99.29
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	99.07
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	98.93
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	98.88
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.81
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	98.8
PRK13940	414	glutamyl-tRNA reductase; Provisional	98.7
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.66
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	98.6
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.42
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	98.38
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.34
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.31
PLN00203	519	glutamyl-tRNA reductase	98.22
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.22
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.19
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.15
COG0499	420	SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me	98.1
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	98.06
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	98.02
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.0
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.98
PLN02494	477	adenosylhomocysteinase	97.97
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.94
PRK12862	763	malic enzyme; Reviewed	97.89
PRK07232	752	bifunctional malic enzyme oxidoreductase/phosphotr	97.85
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.83
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.78
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.69
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	97.69
PRK14982	340	acyl-ACP reductase; Provisional	97.67
PRK12861	764	malic enzyme; Reviewed	97.62
COG0281	432	SfcA Malic enzyme [Energy production and conversio	97.6
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.59
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	97.55
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.54
PLN02928	347	oxidoreductase family protein	97.49
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	97.49
PRK13243	333	glyoxylate reductase; Reviewed	97.44
PRK14804	311	ornithine carbamoyltransferase; Provisional	97.35
PRK12480	330	D-lactate dehydrogenase; Provisional	97.28
PRK06436	303	glycerate dehydrogenase; Provisional	97.25
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.24
PRK04284	332	ornithine carbamoyltransferase; Provisional	97.19
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.17
PRK14031	444	glutamate dehydrogenase; Provisional	97.17
KOG1370	434	consensus S-adenosylhomocysteine hydrolase [Coenzy	97.15
PRK00779	304	ornithine carbamoyltransferase; Provisional	97.12
PRK07574	385	formate dehydrogenase; Provisional	97.12
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	97.11
cd05312	279	NAD_bind_1_malic_enz NAD(P) binding domain of mali	97.11
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	97.1
PRK02102	331	ornithine carbamoyltransferase; Validated	97.09
PRK02255	338	putrescine carbamoyltransferase; Provisional	97.08
PRK08605	332	D-lactate dehydrogenase; Validated	97.06
PRK06932	314	glycerate dehydrogenase; Provisional	97.05
cd00762	254	NAD_bind_malic_enz NAD(P) binding domain of malic	97.03
PRK06487	317	glycerate dehydrogenase; Provisional	97.03
TIGR00658	304	orni_carb_tr ornithine carbamoyltransferase. Most	97.02
TIGR00670	301	asp_carb_tr aspartate carbamoyltransferase. Ornith	97.01
PRK14805	302	ornithine carbamoyltransferase; Provisional	97.0
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.99
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.99
PLN02342	348	ornithine carbamoyltransferase	96.95
PRK13403	335	ketol-acid reductoisomerase; Provisional	96.95
PRK12562	334	ornithine carbamoyltransferase subunit F; Provisio	96.95
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.94
PLN03129	581	NADP-dependent malic enzyme; Provisional	96.94
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	96.94
PRK13529	563	malate dehydrogenase; Provisional	96.9
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	96.89
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	96.88
PRK01713	334	ornithine carbamoyltransferase; Provisional	96.87
PF08501	83	Shikimate_dh_N: Shikimate dehydrogenase substrate	96.86
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	96.83
PLN02527	306	aspartate carbamoyltransferase	96.82
PRK06141	314	ornithine cyclodeaminase; Validated	96.82
PRK13814	310	pyrB aspartate carbamoyltransferase catalytic subu	96.81
PLN03139	386	formate dehydrogenase; Provisional	96.8
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	96.8
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	96.79
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	96.76
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.74
PLN02306	386	hydroxypyruvate reductase	96.73
PTZ00317	559	NADP-dependent malic enzyme; Provisional	96.72
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	96.71
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.71
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.7
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.69
PRK08291	330	ectoine utilization protein EutC; Validated	96.67
PF03949	255	Malic_M: Malic enzyme, NAD binding domain; InterPr	96.67
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	96.66
PRK05479	330	ketol-acid reductoisomerase; Provisional	96.65
PRK05562	223	precorrin-2 dehydrogenase; Provisional	96.65
cd05313	254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	96.63
PRK09414	445	glutamate dehydrogenase; Provisional	96.63
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.62
PRK07340	304	ornithine cyclodeaminase; Validated	96.54
PRK00856	305	pyrB aspartate carbamoyltransferase catalytic subu	96.51
PRK08618	325	ornithine cyclodeaminase; Validated	96.5
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	96.5
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.5
PRK03515	336	ornithine carbamoyltransferase subunit I; Provisio	96.49
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.46
PLN02477	410	glutamate dehydrogenase	96.4
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	96.39
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.38
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.37
PRK14030	445	glutamate dehydrogenase; Provisional	96.37
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.35
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.32
PRK06398	258	aldose dehydrogenase; Validated	96.32
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.31
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.3
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.27
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.26
PRK09072	263	short chain dehydrogenase; Provisional	96.19
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.17
PRK07200	395	aspartate/ornithine carbamoyltransferase family pr	96.17
PRK04523	335	N-acetylornithine carbamoyltransferase; Reviewed	96.14
PRK06949	258	short chain dehydrogenase; Provisional	96.14
PRK10637	457	cysG siroheme synthase; Provisional	96.13
PRK08192	338	aspartate carbamoyltransferase; Provisional	96.13
PRK11891	429	aspartate carbamoyltransferase; Provisional	96.12
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.1
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.1
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.08
TIGR03316	357	ygeW probable carbamoyltransferase YgeW. Members o	96.08
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.07
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.04
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.01
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	95.98
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	95.96
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.96
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	95.91
PRK12828	239	short chain dehydrogenase; Provisional	95.9
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	95.89
PRK07856	252	short chain dehydrogenase; Provisional	95.88
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	95.87
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	95.86
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.86
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.85
PRK06523	260	short chain dehydrogenase; Provisional	95.85
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.82
PRK08862	227	short chain dehydrogenase; Provisional	95.79
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.77
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	95.77
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.76
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.75
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.74
PTZ00117	319	malate dehydrogenase; Provisional	95.73
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	95.72
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.7
PLN02712	667	arogenate dehydrogenase	95.7
PRK12367	245	short chain dehydrogenase; Provisional	95.7
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	95.69
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.68
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.65
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.62
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	95.6
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.59
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	95.58
PLN02688	266	pyrroline-5-carboxylate reductase	95.56
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	95.54
PLN02256	304	arogenate dehydrogenase	95.54
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.54
PRK07417	279	arogenate dehydrogenase; Reviewed	95.52
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.51
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.46
PRK05866	293	short chain dehydrogenase; Provisional	95.44
PRK07062	265	short chain dehydrogenase; Provisional	95.44
PRK00421	461	murC UDP-N-acetylmuramate--L-alanine ligase; Provi	95.42
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.41
PRK05867	253	short chain dehydrogenase; Provisional	95.39
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.38
PRK06138	252	short chain dehydrogenase; Provisional	95.38
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.37
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.37
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	95.37
PRK07063	260	short chain dehydrogenase; Provisional	95.36
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.36
PRK04690	468	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.35
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.33
PRK12829	264	short chain dehydrogenase; Provisional	95.33
PRK08339	263	short chain dehydrogenase; Provisional	95.32
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.32
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.32
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	95.32
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	95.31
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.3
PRK06057	255	short chain dehydrogenase; Provisional	95.3
PRK08265	261	short chain dehydrogenase; Provisional	95.28
PRK06182	273	short chain dehydrogenase; Validated	95.28
PRK07890	258	short chain dehydrogenase; Provisional	95.28
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	95.28
PRK05717	255	oxidoreductase; Validated	95.27
PLN02253	280	xanthoxin dehydrogenase	95.24
PRK08223	287	hypothetical protein; Validated	95.23
PRK06172	253	short chain dehydrogenase; Provisional	95.23
PRK08628	258	short chain dehydrogenase; Provisional	95.19
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.19
PRK12743	256	oxidoreductase; Provisional	95.19
PRK06179	270	short chain dehydrogenase; Provisional	95.18
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	95.18
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.17
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.17
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.14
PRK09186	256	flagellin modification protein A; Provisional	95.13
PRK06841	255	short chain dehydrogenase; Provisional	95.12
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.12
PRK05225	487	ketol-acid reductoisomerase; Validated	95.11
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.1
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	95.08
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.06
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.06
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	95.05
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	95.05
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.05
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	95.04
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.04
PRK07774	250	short chain dehydrogenase; Provisional	95.03
CHL00194	317	ycf39 Ycf39; Provisional	95.02
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	94.97
PRK06545	359	prephenate dehydrogenase; Validated	94.97
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	94.95
PRK01390	460	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.93
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	94.92
PRK09242	257	tropinone reductase; Provisional	94.92
PRK06125	259	short chain dehydrogenase; Provisional	94.91
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.91
PRK07035	252	short chain dehydrogenase; Provisional	94.91
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	94.9
PRK09291	257	short chain dehydrogenase; Provisional	94.89
PRK05872	296	short chain dehydrogenase; Provisional	94.89
PTZ00082	321	L-lactate dehydrogenase; Provisional	94.89
PRK07060	245	short chain dehydrogenase; Provisional	94.88
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	94.88
PRK06194	287	hypothetical protein; Provisional	94.88
PRK08264	238	short chain dehydrogenase; Validated	94.87
PRK08703	239	short chain dehydrogenase; Provisional	94.87
PRK15059	292	tartronate semialdehyde reductase; Provisional	94.86
PRK08936	261	glucose-1-dehydrogenase; Provisional	94.84
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.82
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.81
PRK05876	275	short chain dehydrogenase; Provisional	94.8
PRK06223	307	malate dehydrogenase; Reviewed	94.79
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	94.79
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.79
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.78
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.76
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.75
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.75
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.74
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.73
PRK08589	272	short chain dehydrogenase; Validated	94.73
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.72
PLN02896	353	cinnamyl-alcohol dehydrogenase	94.72
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.7
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	94.68
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	94.68
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.65
PRK07067	257	sorbitol dehydrogenase; Provisional	94.65
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	94.64
PRK05854	313	short chain dehydrogenase; Provisional	94.62
PRK07576	264	short chain dehydrogenase; Provisional	94.62
PRK06114	254	short chain dehydrogenase; Provisional	94.61
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.6
PRK07478	254	short chain dehydrogenase; Provisional	94.58
PF13738	203	Pyr_redox_3: Pyridine nucleotide-disulphide oxidor	94.58
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.57
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.56
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	94.56
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.56
PRK07814	263	short chain dehydrogenase; Provisional	94.55
PRK06196	315	oxidoreductase; Provisional	94.55
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.53
PRK06500	249	short chain dehydrogenase; Provisional	94.53
PRK07825	273	short chain dehydrogenase; Provisional	94.52
PLN00198	338	anthocyanidin reductase; Provisional	94.5
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.49
PRK12939	250	short chain dehydrogenase; Provisional	94.49
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	94.47
PRK10423	327	transcriptional repressor RbsR; Provisional	94.47
PRK01368	454	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.44
PRK12742	237	oxidoreductase; Provisional	94.44
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.43
PLN02427	386	UDP-apiose/xylose synthase	94.43
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.41
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.4
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	94.4
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	94.37
KOG0725	270	consensus Reductases with broad range of substrate	94.37
PRK12937	245	short chain dehydrogenase; Provisional	94.36
PRK08818	370	prephenate dehydrogenase; Provisional	94.34
PRK12779	944	putative bifunctional glutamate synthase subunit b	94.33
PRK12827	249	short chain dehydrogenase; Provisional	94.31
PLN02695	370	GDP-D-mannose-3',5'-epimerase	94.31
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.31
PRK09135	249	pteridine reductase; Provisional	94.3
PRK06139	330	short chain dehydrogenase; Provisional	94.27
PRK08643	256	acetoin reductase; Validated	94.25
PRK05875	276	short chain dehydrogenase; Provisional	94.22
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	94.22
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.22
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.21
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.2
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.2
PRK08226	263	short chain dehydrogenase; Provisional	94.18
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	94.17
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	94.17
COG2910	211	Putative NADH-flavin reductase [General function p	94.16
COG5322	351	Predicted dehydrogenase [General function predicti	94.15
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.11
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.11
PRK08278	273	short chain dehydrogenase; Provisional	94.09
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	94.08
PRK06198	260	short chain dehydrogenase; Provisional	94.08
PRK00683	418	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.07
PRK08263	275	short chain dehydrogenase; Provisional	94.07
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	94.06
PRK08655	437	prephenate dehydrogenase; Provisional	94.06
PLN02778	298	3,5-epimerase/4-reductase	94.06
PRK07326	237	short chain dehydrogenase; Provisional	94.04
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	94.04
PLN02214	342	cinnamoyl-CoA reductase	94.03
PRK07806	248	short chain dehydrogenase; Provisional	93.99
PRK07577	234	short chain dehydrogenase; Provisional	93.99
PRK06181	263	short chain dehydrogenase; Provisional	93.96
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	93.95
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	93.91
PRK09620	229	hypothetical protein; Provisional	93.89
COG0078	310	ArgF Ornithine carbamoyltransferase [Amino acid tr	93.88
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	93.88
PRK06701	290	short chain dehydrogenase; Provisional	93.86
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	93.86
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	93.84
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	93.84
PRK05993	277	short chain dehydrogenase; Provisional	93.82
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	93.81
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	93.81
PRK06914	280	short chain dehydrogenase; Provisional	93.8
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	93.8
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	93.8
PRK11303	328	DNA-binding transcriptional regulator FruR; Provis	93.8
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	93.78
PRK08507	275	prephenate dehydrogenase; Validated	93.78
PRK07677	252	short chain dehydrogenase; Provisional	93.77
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	93.77
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	93.77
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	93.76
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	93.75
PLN03209	576	translocon at the inner envelope of chloroplast su	93.75
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	93.74
TIGR03376	342	glycerol3P_DH glycerol-3-phosphate dehydrogenase (	93.74
PRK06197	306	short chain dehydrogenase; Provisional	93.73
PRK12744	257	short chain dehydrogenase; Provisional	93.69
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	93.67
PLN02602	350	lactate dehydrogenase	93.65
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	93.63
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	93.61
PRK07411	390	hypothetical protein; Validated	93.59
PRK07680	273	late competence protein ComER; Validated	93.56
PRK08267	260	short chain dehydrogenase; Provisional	93.53
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	93.53
PRK05086	312	malate dehydrogenase; Provisional	93.52
PRK07109	334	short chain dehydrogenase; Provisional	93.52
PRK07985	294	oxidoreductase; Provisional	93.52
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	93.51
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	93.51
PRK06128	300	oxidoreductase; Provisional	93.46
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	93.45
COG2072	443	TrkA Predicted flavoprotein involved in K+ transpo	93.44
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	93.42
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	93.4
PRK08303	305	short chain dehydrogenase; Provisional	93.4
PF00208	244	ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Val	93.37
PLN02653	340	GDP-mannose 4,6-dehydratase	93.35
PRK12935	247	acetoacetyl-CoA reductase; Provisional	93.34
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	93.33
PTZ00188	506	adrenodoxin reductase; Provisional	93.32
PRK10401	346	DNA-binding transcriptional regulator GalS; Provis	93.31
PRK06720	169	hypothetical protein; Provisional	93.31
PLN02206	442	UDP-glucuronate decarboxylase	93.28
PRK12746	254	short chain dehydrogenase; Provisional	93.26
COG0059	338	IlvC Ketol-acid reductoisomerase [Amino acid trans	93.25
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	93.24
PLN02514	357	cinnamyl-alcohol dehydrogenase	93.22
KOG0409	327	consensus Predicted dehydrogenase [General functio	93.2
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	93.2
PRK09526	342	lacI lac repressor; Reviewed	93.16
PRK07102	243	short chain dehydrogenase; Provisional	93.15
PLN00106	323	malate dehydrogenase	93.13
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	93.13
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	93.11
PRK07791	286	short chain dehydrogenase; Provisional	93.1
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	93.1
PLN02178	375	cinnamyl-alcohol dehydrogenase	93.09
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	93.08
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	93.06
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	93.02
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	93.02
PRK06180	277	short chain dehydrogenase; Provisional	93.02
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	93.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	93.0
PRK07831	262	short chain dehydrogenase; Provisional	92.98
PRK06823	315	ornithine cyclodeaminase; Validated	92.96
PRK07024	257	short chain dehydrogenase; Provisional	92.95
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	92.95
PRK08177	225	short chain dehydrogenase; Provisional	92.94
PRK08324	681	short chain dehydrogenase; Validated	92.9
PRK06483	236	dihydromonapterin reductase; Provisional	92.89
PLN02780	320	ketoreductase/ oxidoreductase	92.88
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	92.86
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.79
PRK12747	252	short chain dehydrogenase; Provisional	92.76
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	92.74
PRK03806	438	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.69
PLN02240	352	UDP-glucose 4-epimerase	92.66
PRK09496	453	trkA potassium transporter peripheral membrane com	92.63
PRK07454	241	short chain dehydrogenase; Provisional	92.61
TIGR02417	327	fruct_sucro_rep D-fructose-responsive transcriptio	92.61
PRK12778	752	putative bifunctional 2-polyprenylphenol hydroxyla	92.59
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	92.59
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	92.57
PRK07453	322	protochlorophyllide oxidoreductase; Validated	92.55
TIGR01087	433	murD UDP-N-acetylmuramoylalanine--D-glutamate liga	92.52
COG1028	251	FabG Dehydrogenases with different specificities (	92.52
PRK05855	582	short chain dehydrogenase; Validated	92.49
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	92.48
PLN02858	1378	fructose-bisphosphate aldolase	92.47
PLN02353	473	probable UDP-glucose 6-dehydrogenase	92.47
PRK07074	257	short chain dehydrogenase; Provisional	92.46
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	92.44
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	92.43
PLN02572	442	UDP-sulfoquinovose synthase	92.43
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	92.41
PRK14806	735	bifunctional cyclohexadienyl dehydrogenase/ 3-phos	92.41
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	92.39
TIGR02415	254	23BDH acetoin reductases. One member of this famil	92.35
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	92.35
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	92.35
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	92.34
PRK04148	134	hypothetical protein; Provisional	92.32
PRK12814	652	putative NADPH-dependent glutamate synthase small	92.3
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	92.28
PLN02852	491	ferredoxin-NADP+ reductase	92.28
PLN02583	297	cinnamoyl-CoA reductase	92.25
PTZ00345	365	glycerol-3-phosphate dehydrogenase; Provisional	92.23
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	92.22
PLN02858	1378	fructose-bisphosphate aldolase	92.19

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=100.00  E-value=2.4e-74  Score=515.93  Aligned_cols=229  Identities=85%  Similarity=1.239  Sum_probs=222.1

Q ss_pred             CCCCccchhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC
Q 027064            1 MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV   80 (229)
Q Consensus         1 ~~~~~~~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~   80 (229)
                      |+.|..-|+.+|||+++|++++++++++++.|+++.|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||+++
T Consensus         1 ~~~~~~~~~~ildGk~vA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~   80 (299)
T PLN02516          1 MASPSDHVAQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENI   80 (299)
T ss_pred             CCCCccccCeEeehHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCC
Confidence            77777778889999999999999999999999988789999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHH
Q 027064           81 SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR  160 (229)
Q Consensus        81 ~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~  160 (229)
                      +++||++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.++..++|+||||+||++||++
T Consensus        81 s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~  160 (299)
T PLN02516         81 SEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSR  160 (299)
T ss_pred             CHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCHhhHhhHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999998643578999999999999999


Q ss_pred             hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          161 SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       161 ~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+++++||+|+|||||.+||||+++||+++|||||+|||+|+++.+++++|||||+|+|+|+||++|||
T Consensus       161 ~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~AvGk~~~i~~~~v  229 (299)
T PLN02516        161 SGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWI  229 (299)
T ss_pred             hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999999999996

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.2e-74  Score=513.91  Aligned_cols=221  Identities=43%  Similarity=0.701  Sum_probs=215.8

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      |+++|+||++|++|++++++++++|+++++++|+||+|++|+||+|..|+++|.|.|+++||++++++||+++++++|++
T Consensus         1 ~~~il~Gk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~   80 (288)
T PRK14171          1 MNNIIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLIS   80 (288)
T ss_pred             CCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            46799999999999999999999999887899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG  167 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g  167 (229)
                      .|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+ .++|+||||+||++||++|+++++|
T Consensus        81 ~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~av~~lL~~y~i~l~G  159 (288)
T PRK14171         81 KINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHPLNVGYLHSGI-SQGFIPCTALGCLAVIKKYEPNLTG  159 (288)
T ss_pred             HHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCccchhhhhcCC-CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence            999999999999999999999999999999999999999999999999999883 3789999999999999999999999


Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|+|||||.+||+|+++||+++|||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus       160 K~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~AvGkp~~i~~~~v  221 (288)
T PRK14171        160 KNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYF  221 (288)
T ss_pred             CEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCCCccCHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999986

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=4.3e-74  Score=513.25  Aligned_cols=222  Identities=43%  Similarity=0.673  Sum_probs=215.9

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      |+++|||+++|++|+++++++++.|++++|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|++|++
T Consensus         1 ~~~ildGk~va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~   80 (294)
T PRK14187          1 ETNIIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIE   80 (294)
T ss_pred             CcEEeehHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            46789999999999999999999998877899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG  167 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g  167 (229)
                      .|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||++||++|+++++|
T Consensus        81 ~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~G  160 (294)
T PRK14187         81 KINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSG  160 (294)
T ss_pred             HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999998533689999999999999999999999


Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||+++||
T Consensus       161 k~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~i  222 (294)
T PRK14187        161 SDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAAVGIPNFVKYSWI  222 (294)
T ss_pred             CEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999996

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=4.2e-74  Score=511.22  Aligned_cols=219  Identities=53%  Similarity=0.844  Sum_probs=214.8

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      |+++|+|+++|++++++++++++.|+++ |++|+|++|++|+|++|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus         1 ~~~il~Gk~iA~~i~~~ik~~i~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   79 (284)
T PRK14170          1 MGEIIDGKKLAKEIQEKVTREVAELVKE-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLS   79 (284)
T ss_pred             CCeEEEhHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            5789999999999999999999999887 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG  167 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g  167 (229)
                      .|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||.||++||++|+++++|
T Consensus        80 ~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~G  157 (284)
T PRK14170         80 VVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEG  157 (284)
T ss_pred             HHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999998  5789999999999999999999999


Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||+++||
T Consensus       158 k~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~~~~i~~~~v  219 (284)
T PRK14170        158 KRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYI  219 (284)
T ss_pred             CEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999986

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=100.00  E-value=8.5e-74  Score=505.75  Aligned_cols=218  Identities=55%  Similarity=0.870  Sum_probs=214.4

Q ss_pred             hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064           10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV   89 (229)
Q Consensus        10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   89 (229)
                      ++|||+++|++++++++++++.++++.++.|+|++|++|+||+|..|+++|.|+|+++||.++.++||++++++||++.|
T Consensus         1 ~~idGk~lA~~i~~~lk~~v~~~~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I   80 (283)
T COG0190           1 MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALI   80 (283)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHH
Confidence            37999999999999999999999998789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064           90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR  169 (229)
Q Consensus        90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~  169 (229)
                      .+||+|++|||||||+|||+|+|+++++++|+|+||||||||+|+|+|+.+  ++.|+||||.||++||++|+++++||+
T Consensus        81 ~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~p~KDVDG~hp~N~g~L~~~--~~~~~PCTp~gi~~ll~~~~i~l~Gk~  158 (283)
T COG0190          81 DELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGFHPYNLGKLAQG--EPGFLPCTPAGIMTLLEEYGIDLRGKN  158 (283)
T ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcCcCCCccccChhHhcchhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999987  788999999999999999999999999


Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|||||++||||++.||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus       159 ~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~AvG~p~~i~~d~v  218 (283)
T COG0190         159 VVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMV  218 (283)
T ss_pred             EEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEecCCccccccccc
Confidence            999999999999999999999999999999999999999999999999999999999997

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=6.6e-74  Score=509.94  Aligned_cols=221  Identities=44%  Similarity=0.725  Sum_probs=215.9

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      |.+.+||||++|++|++++++++++|+++++.+|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++++||+
T Consensus         1 ~~~~ildGk~ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~   80 (284)
T PRK14177          1 MSPILLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELL   80 (284)
T ss_pred             CCCeEeEhHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            44689999999999999999999999988778899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||++||++|+++++
T Consensus        81 ~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~ll~~y~i~l~  158 (284)
T PRK14177         81 GVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTTLSFGKLSMG--VETYLPCTPYGMVLLLKEYGIDVT  158 (284)
T ss_pred             HHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCChhhHHHHHcC--CCCCCCCCHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999999999999999999999999999998  578999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus       159 Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsAvGk~~~i~~~~i  221 (284)
T PRK14177        159 GKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWI  221 (284)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEeCCCcCccCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999986

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=100.00  E-value=7.8e-74  Score=521.33  Aligned_cols=224  Identities=61%  Similarity=1.009  Sum_probs=217.5

Q ss_pred             cchhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHH
Q 027064            6 DQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAEL   85 (229)
Q Consensus         6 ~~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el   85 (229)
                      .|++++|||+++|++|+++++++++.|+++.+++|+||+|++|+||+|..|+++|+|+|+++||+++.++||++++|+||
T Consensus        70 ~~~~~ildGk~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~el  149 (364)
T PLN02616         70 EGGAKVIDGKAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEV  149 (364)
T ss_pred             cccCeEeEhHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHH
Confidence            44578999999999999999999999998888999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCC
Q 027064           86 ISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTI  165 (229)
Q Consensus        86 ~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l  165 (229)
                      ++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||+.|+|+|+.++..+.|+||||.||++||++|++++
T Consensus       150 l~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l  229 (364)
T PLN02616        150 LKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEI  229 (364)
T ss_pred             HHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999999999999999999999864357899999999999999999999


Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +||+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus       230 ~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIsAvGkp~~i~~d~v  293 (364)
T PLN02616        230 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISAVGQPNMVRGSWI  293 (364)
T ss_pred             CCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEEcCCCcCcCCHHHc
Confidence            9999999999999999999999999999999999999999999999999999999999999996

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=100.00  E-value=9.9e-74  Score=518.55  Aligned_cols=224  Identities=60%  Similarity=0.976  Sum_probs=217.2

Q ss_pred             cchhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHH
Q 027064            6 DQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAEL   85 (229)
Q Consensus         6 ~~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el   85 (229)
                      .+|+++||||++|++|+++++++++.++++.+++|+||+|+||+||+|..|+++|+|+|+++||+++.++||++++|+||
T Consensus        53 ~~~~~ildGk~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~el  132 (345)
T PLN02897         53 EQKTVVIDGNVIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQI  132 (345)
T ss_pred             cccceEeehHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHH
Confidence            34678999999999999999999999998878999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCC
Q 027064           86 ISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTI  165 (229)
Q Consensus        86 ~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l  165 (229)
                      ++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||+.|+|+|+.++..+.|+||||.||++||++|++++
T Consensus       133 l~~I~~lN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l  212 (345)
T PLN02897        133 LSALRKFNEDTSIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEI  212 (345)
T ss_pred             HHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999999999999999999999864347899999999999999999999


Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +||+|+|||||.+||+|+|+||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus       213 ~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsAvGkp~~v~~d~v  276 (345)
T PLN02897        213 AGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLVRGSWL  276 (345)
T ss_pred             CCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence            9999999999999999999999999999999999999999999999999999999999999996

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.3e-73  Score=507.02  Aligned_cols=220  Identities=40%  Similarity=0.647  Sum_probs=213.7

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      |+++||||++|+++++++++++++++++...+|+|++|++|+||+|..|+++|.|+|+++||++++++||++++++||++
T Consensus         1 ~~~ildGk~iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   80 (278)
T PRK14172          1 MGQIINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLIN   80 (278)
T ss_pred             CCeEEeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            46799999999999999999999998873356999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG  167 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g  167 (229)
                      .|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+++.|  .++|+||||+||++||++|+++++|
T Consensus        81 ~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~av~~lL~~~~i~l~G  158 (278)
T PRK14172         81 EIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEG  158 (278)
T ss_pred             HHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999998  6789999999999999999999999


Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|+|||||.+||+|+++||+++|||||+|||+|+++.+++++|||||+|+|+|+||++|||
T Consensus       159 k~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~i  220 (278)
T PRK14172        159 KEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAIGRPKFIDEEYV  220 (278)
T ss_pred             CEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999986

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.9e-73  Score=506.82  Aligned_cols=218  Identities=41%  Similarity=0.704  Sum_probs=213.8

Q ss_pred             hhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHH
Q 027064            9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISK   88 (229)
Q Consensus         9 ~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~   88 (229)
                      +.+|+||++|++++++++++++.|+++ |++|+|++|++|+|++|..|+++|.|+|+++||++++++||++++|+||++.
T Consensus         1 ~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~   79 (282)
T PRK14169          1 ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAK   79 (282)
T ss_pred             CeeeehHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence            468999999999999999999999877 8999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Q 027064           89 VHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGK  168 (229)
Q Consensus        89 I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk  168 (229)
                      |++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.+  .++|+||||+||++||++|+++++||
T Consensus        80 I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk  157 (282)
T PRK14169         80 VAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGK  157 (282)
T ss_pred             HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999998  68899999999999999999999999


Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus       158 ~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~p~~i~~~~v  218 (282)
T PRK14169        158 RVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFIGADAV  218 (282)
T ss_pred             EEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence            9999999999999999999999999999999999999999999999999999999999986

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.1e-73  Score=506.64  Aligned_cols=218  Identities=45%  Similarity=0.733  Sum_probs=212.8

Q ss_pred             hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064           10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV   89 (229)
Q Consensus        10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   89 (229)
                      ++||||++|++|+++++++++.|+++ |++|+|++|++|+||+|..|+++|.|.|+++||+++.++||++++++||++.|
T Consensus         2 ~il~Gk~~a~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I   80 (282)
T PRK14166          2 TLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALI   80 (282)
T ss_pred             eeeehHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            37999999999999999999999877 89999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064           90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR  169 (229)
Q Consensus        90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~  169 (229)
                      ++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|. .++|+||||+||++||++|+++++||+
T Consensus        81 ~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~avi~lL~~y~i~l~Gk~  159 (282)
T PRK14166         81 NTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGL-ESGFLPCTPLGVMKLLKAYEIDLEGKD  159 (282)
T ss_pred             HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCE
Confidence            9999999999999999999999999999999999999999999999999873 468999999999999999999999999


Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|||||.+||||+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||+++||
T Consensus       160 vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~v  219 (282)
T PRK14166        160 AVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMV  219 (282)
T ss_pred             EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999986

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.8e-73  Score=510.14  Aligned_cols=223  Identities=46%  Similarity=0.745  Sum_probs=216.5

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      ||+.+||||++|++|+++++++++.+++++|++|+|++|++|+||+|..|+++|+|+|+++||+++.++||++++|+||+
T Consensus         1 m~~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~   80 (297)
T PRK14168          1 MSAKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELL   80 (297)
T ss_pred             CCCeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            45679999999999999999999999988789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||++||++|+++++
T Consensus        81 ~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~  160 (297)
T PRK14168         81 ALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETS  160 (297)
T ss_pred             HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999999999999999999999999999999853378999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhC----CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKA----DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~----~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||.+||+|+|+||+++    |||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus       161 Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~i  227 (297)
T PRK14168        161 GAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWI  227 (297)
T ss_pred             CCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEEecCCcCccCHHHc
Confidence            999999999999999999999998    899999999999999999999999999999999999996

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.6e-73  Score=506.40  Aligned_cols=220  Identities=47%  Similarity=0.783  Sum_probs=214.5

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      ||+.+|+||++|++++++++++++.++++ |++|+||+|++|+|++|..|+++|.|+|+++||+++.++||++++++||+
T Consensus         1 ~~~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~   79 (284)
T PRK14193          1 MTAIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELN   79 (284)
T ss_pred             CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            45679999999999999999999999877 89999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .+.|+||||+||++||++|+++++
T Consensus        80 ~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~  157 (284)
T PRK14193         80 AVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLHPTNLGRLVLN--EPAPLPCTPRGIVHLLRRYDVELA  157 (284)
T ss_pred             HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999999999999999999999999999988  578999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhh--CCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLK--ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~--~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||.+||+|+++||++  +|||||+|||+|+++.+++++|||||+|+|+|+||++|||
T Consensus       158 Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~AvGkp~~i~~~~i  222 (284)
T PRK14193        158 GAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMV  222 (284)
T ss_pred             CCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEecCCcCccCHHHc
Confidence            99999999999999999999998  8999999999999999999999999999999999999986

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.7e-73  Score=505.63  Aligned_cols=216  Identities=50%  Similarity=0.775  Sum_probs=211.7

Q ss_pred             hcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHH
Q 027064           11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVH   90 (229)
Q Consensus        11 il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~   90 (229)
                      +|||+++|++++++++++++.|+++ |++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+++++.|+
T Consensus         3 ildGk~iA~~i~~~ik~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~   81 (282)
T PRK14182          3 LIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIA   81 (282)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence            7999999999999999999999877 899999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCC-cccCCHHHHHHHHHHhCCCCCCCe
Q 027064           91 ELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPL-FLPCTPKGCLELLKRSGVTIKGKR  169 (229)
Q Consensus        91 ~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~-~~PcTa~av~~lL~~~~~~l~gk~  169 (229)
                      +||+|++|||||||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.|  .+. |+||||+||++||++|+++++||+
T Consensus        82 ~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~~PcTp~avi~ll~~~~i~l~Gk~  159 (282)
T PRK14182         82 RLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIG--IAGVPRPCTPAGVMRMLDEARVDPKGKR  159 (282)
T ss_pred             HHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCC--CCCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence            99999999999999999999999999999999999999999999999998  455 899999999999999999999999


Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|||||.+||+|+++||+++|||||+|||+|+++.+++++|||||+|+|+|+||++|||
T Consensus       160 vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~AvGk~~~i~~~~i  219 (282)
T PRK14182        160 ALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWV  219 (282)
T ss_pred             EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999986

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=3.6e-73  Score=505.87  Aligned_cols=221  Identities=43%  Similarity=0.742  Sum_probs=216.2

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      .|+++|||+++|++|+++++++++.++++.|++|+||+|++|+||+|..|+++|.|+|+++||++++++||++++++||+
T Consensus         6 ~~~~ildGk~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~   85 (287)
T PRK14176          6 YESRIIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELL   85 (287)
T ss_pred             cceEEEEhHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            46789999999999999999999999887789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||+++|++|+++++
T Consensus        86 ~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g--~~~~~PcTp~av~~ll~~~~i~l~  163 (287)
T PRK14176         86 ELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIG--DEGLVPCTPHGVIRALEEYGVDIE  163 (287)
T ss_pred             HHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999999999999999999999998  578999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||.+||+|+++||+++|||||+||++|+|+.+++++|||||+|+|+|+||+++||
T Consensus       164 Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~AvG~p~~i~~~~v  226 (287)
T PRK14176        164 GKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVVATGVKHLIKADMV  226 (287)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEEccCCccccCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999986

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.9e-73  Score=508.84  Aligned_cols=219  Identities=46%  Similarity=0.785  Sum_probs=214.3

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      |+++|+|+++|++++++++++++.|+++ |++|+||+|++|+||+|..|+++|+|+|+++||++++++||++++++||++
T Consensus         1 ~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~   79 (297)
T PRK14167          1 MTEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYD   79 (297)
T ss_pred             CCeEEeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            5689999999999999999999999876 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG  167 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g  167 (229)
                      .|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .+.|+||||+||++||++|+++++|
T Consensus        80 ~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~G  157 (297)
T PRK14167         80 TIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAG--DARFKPCTPHGIQKLLAAAGVDTEG  157 (297)
T ss_pred             HHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999998  5789999999999999999999999


Q ss_pred             CeEEEEccchhhhHHHHHHHhhC----CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA----DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~----~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|+|||||.+||||+|+||+++    |||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus       158 k~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~i  223 (297)
T PRK14167        158 ADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSML  223 (297)
T ss_pred             CEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence            99999999999999999999998    899999999999999999999999999999999999986

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=3e-73  Score=506.33  Aligned_cols=220  Identities=51%  Similarity=0.814  Sum_probs=215.6

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      ||+.+|+|+++|++++++++++++.|+++ +++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus         1 ~~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   79 (284)
T PRK14190          1 MMAVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELL   79 (284)
T ss_pred             CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            67789999999999999999999999877 89999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||.||+++|++|+++++
T Consensus        80 ~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~  157 (284)
T PRK14190         80 ALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDIS  157 (284)
T ss_pred             HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999999999999999999999998  678999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||.+||+|+|+||+++|||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus       158 Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~AvG~p~~i~~~~i  220 (284)
T PRK14190        158 GKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVAVGKPKLITADMV  220 (284)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999986

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=3.8e-73  Score=508.12  Aligned_cols=220  Identities=48%  Similarity=0.745  Sum_probs=215.4

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      |+.+|||+++|++++++++++++.++++++++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++
T Consensus         1 ~~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   80 (297)
T PRK14186          1 MALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEA   80 (297)
T ss_pred             CCEEeehHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            56799999999999999999999998887899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG  167 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g  167 (229)
                      .|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+++.|  .+.|+||||+||++||++|+++++|
T Consensus        81 ~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~G  158 (297)
T PRK14186         81 LIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKG--EPGLRSCTPAGVMRLLRSQQIDIAG  158 (297)
T ss_pred             HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999988  5789999999999999999999999


Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|+|||||.+||+|+++||+++|||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus       159 k~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~i  220 (297)
T PRK14186        159 KKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAAAGRPNLIGAEMV  220 (297)
T ss_pred             CEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999986

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=3.6e-73  Score=507.13  Aligned_cols=218  Identities=49%  Similarity=0.763  Sum_probs=213.7

Q ss_pred             hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064           10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV   89 (229)
Q Consensus        10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   89 (229)
                      ++|||+++|++++++++++++.|+++.+++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus         2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   81 (293)
T PRK14185          2 QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKV   81 (293)
T ss_pred             eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            47999999999999999999999988789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064           90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR  169 (229)
Q Consensus        90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~  169 (229)
                      ++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||++||++|+++++||+
T Consensus        82 ~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~GK~  159 (293)
T PRK14185         82 RELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSIG--LPCFVSATPNGILELLKRYHIETSGKK  159 (293)
T ss_pred             HHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999998  588999999999999999999999999


Q ss_pred             EEEEccchhhhHHHHHHHhhC----CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKA----DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~----~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|||||.+||+|+++||+++    |||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus       160 vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~v  223 (293)
T PRK14185        160 CVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMV  223 (293)
T ss_pred             EEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence            999999999999999999998    799999999999999999999999999999999999996

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=6.2e-73  Score=504.68  Aligned_cols=217  Identities=44%  Similarity=0.699  Sum_probs=211.4

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      |++.+|+|+++|++|+++++++++.+    +++|+||+|++|+|++|..|+++|.|+|+++||++++++||++++|+||+
T Consensus         1 m~~~il~Gk~vA~~i~~~l~~~v~~l----~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~   76 (287)
T PRK14173          1 MAARELSGPPAAEAVYAELRARLAKL----PFVPHLRVVRLGEDPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELL   76 (287)
T ss_pred             CCCeEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            45679999999999999999999987    47899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||+.|+|+|+.|  .+.|+||||+||++||++|+++++
T Consensus        77 ~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~  154 (287)
T PRK14173         77 ELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFHPLNVGRLWMG--GEALEPCTPAGVVRLLKHYGIPLA  154 (287)
T ss_pred             HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhhHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999999999999999999999998  578999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+|+++|||
T Consensus       155 Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~v  217 (287)
T PRK14173        155 GKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMV  217 (287)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999986

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=9.9e-73  Score=501.77  Aligned_cols=218  Identities=45%  Similarity=0.761  Sum_probs=213.0

Q ss_pred             hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064           10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV   89 (229)
Q Consensus        10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   89 (229)
                      ++||||++|++|+++++++++.|+++.|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+++++.|
T Consensus         2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I   81 (281)
T PRK14183          2 QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETI   81 (281)
T ss_pred             eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            48999999999999999999999873489999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064           90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR  169 (229)
Q Consensus        90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~  169 (229)
                      ++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+++.|  .++|+||||+||++||++|+++++||+
T Consensus        82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~  159 (281)
T PRK14183         82 AMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHPYNVGRLVTG--LDGFVPCTPLGVMELLEEYEIDVKGKD  159 (281)
T ss_pred             HHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999998  688999999999999999999999999


Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|||||.+||+|+|+||+++|||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus       160 vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~AvGkp~~i~~~~v  219 (281)
T PRK14183        160 VCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMV  219 (281)
T ss_pred             EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCcccccCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999996

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=9e-73  Score=503.20  Aligned_cols=221  Identities=51%  Similarity=0.780  Sum_probs=215.6

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      ||+.+|||+++|++++++++++++.|+++.+++|+|++|++|+||+|..|+++|.|+|+++||++++++||++++|+||+
T Consensus         1 M~~~ildGk~va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~   80 (285)
T PRK10792          1 MTAKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELL   80 (285)
T ss_pred             CCCeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            45679999999999999999999999988778999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||.||+++|++|+++++
T Consensus        81 ~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~  158 (285)
T PRK10792         81 ALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFHPYNVGRLAQR--IPLLRPCTPRGIMTLLERYGIDTY  158 (285)
T ss_pred             HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccChhhHhHHhCC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999999999999999999999988  678999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||.+||+|+++||+++|||||+|||+|+++.+++++|||||+|+|+|++|+.+||
T Consensus       159 Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~avG~p~~v~~~~v  221 (285)
T PRK10792        159 GLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWI  221 (285)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEcCCCcccccHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999886

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.1e-72  Score=502.03  Aligned_cols=219  Identities=45%  Similarity=0.730  Sum_probs=213.7

Q ss_pred             hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064           10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV   89 (229)
Q Consensus        10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   89 (229)
                      .+||||++|++|+++++++++.|+++.|++|+||+|++|+||+|..|+++|.|+|+++||++++++||++++++||++.|
T Consensus         2 ~ildGk~va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I   81 (282)
T PRK14180          2 ILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELI   81 (282)
T ss_pred             ceeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            37999999999999999999999887789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064           90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR  169 (229)
Q Consensus        90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~  169 (229)
                      ++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+++.|+ .++|+||||+||++||++|+++++||+
T Consensus        82 ~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~-~~~~~PcTp~aii~lL~~y~i~l~Gk~  160 (282)
T PRK14180         82 DQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAY  160 (282)
T ss_pred             HHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccChhhHHHHhcCC-CCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence            9999999999999999999999999999999999999999999999999883 378999999999999999999999999


Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||+++||
T Consensus       161 vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsAvGkp~~i~~~~v  220 (282)
T PRK14180        161 AVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMV  220 (282)
T ss_pred             EEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEccCCcCcCCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999986

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.6e-72  Score=500.49  Aligned_cols=218  Identities=49%  Similarity=0.780  Sum_probs=213.8

Q ss_pred             hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064           10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV   89 (229)
Q Consensus        10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   89 (229)
                      ++||||++|++|+++++++++.|+++++++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus         2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I   81 (286)
T PRK14184          2 LLLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLI   81 (286)
T ss_pred             eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            48999999999999999999999988789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064           90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR  169 (229)
Q Consensus        90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~  169 (229)
                      ++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .+.|+||||+||++||++|+++++||+
T Consensus        82 ~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~  159 (286)
T PRK14184         82 AELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALG--LPGFRPCTPAGVMTLLERYGLSPAGKK  159 (286)
T ss_pred             HHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999998  578999999999999999999999999


Q ss_pred             EEEEccchhhhHHHHHHHhh----CCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~----~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|||||.+||+|+++||++    +|||||+||++|+++.+++++|||||+|+|+|+||+++||
T Consensus       160 vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~AvG~p~li~~~~v  223 (286)
T PRK14184        160 AVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMV  223 (286)
T ss_pred             EEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHc
Confidence            99999999999999999999    8999999999999999999999999999999999999986

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=4.5e-72  Score=498.82  Aligned_cols=214  Identities=41%  Similarity=0.749  Sum_probs=209.0

Q ss_pred             hcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHH
Q 027064           11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVH   90 (229)
Q Consensus        11 il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~   90 (229)
                      +||||++|++++++++++++.|    +++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|+
T Consensus         2 ildGk~iA~~i~~~~k~~v~~l----~~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~   77 (287)
T PRK14181          2 LLKGAPAAEHILATIKENISAS----STAPGLAVVLIGNDPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIH   77 (287)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence            6999999999999999999987    689999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeE
Q 027064           91 ELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRA  170 (229)
Q Consensus        91 ~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v  170 (229)
                      +||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+ .++|+||||+||++||++|+++++||+|
T Consensus        78 ~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p~n~g~l~~g~-~~~~~PcTp~avi~lL~~~~i~l~Gk~v  156 (287)
T PRK14181         78 RLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHPVNMGKLLLGE-TDGFIPCTPAGIIELLKYYEIPLHGRHV  156 (287)
T ss_pred             HHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCChhhHHHHhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCCEE
Confidence            999999999999999999999999999999999999999999999999984 3679999999999999999999999999


Q ss_pred             EEEccchhhhHHHHHHHhhC----CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          171 VVVGRSNIVGLPVSLLLLKA----DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       171 ~ViG~s~~VG~pla~~L~~~----~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +|||||.+||||+++||+++    |||||+|||+|+++.+++++|||||+|+|+|+||++|||
T Consensus       157 vViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~~ADIvV~AvG~p~~i~~~~i  219 (287)
T PRK14181        157 AIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMI  219 (287)
T ss_pred             EEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence            99999999999999999999    899999999999999999999999999999999999996

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=8.7e-72  Score=497.16  Aligned_cols=220  Identities=49%  Similarity=0.815  Sum_probs=214.8

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      ||+++||||++|++|+++++++++.|+++ |++|+||+|++|+||+|..|+++|.|+|+++||++++++||++++++||+
T Consensus         1 M~~~ildGk~va~~i~~~lk~~i~~l~~~-g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~   79 (285)
T PRK14189          1 MTAQLIDGNALSKQLRAEAAQRAAALTAR-GHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELL   79 (285)
T ss_pred             CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            45679999999999999999999999877 89999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+++.+  .+.|+||||+||+++|++|+++++
T Consensus        80 ~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~  157 (285)
T PRK14189         80 ARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTG--QPLFRPCTPYGVMKMLESIGIPLR  157 (285)
T ss_pred             HHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCC--CCCCcCCCHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999999999999999999999998  578999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||.+||+|++++|+++|||||+||++|+|+.+++++|||||+|+|+|+||+++|+
T Consensus       158 Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG~~~~i~~~~i  220 (285)
T PRK14189        158 GAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVGKRNVLTADMV  220 (285)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCCCcCccCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999886

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.4e-71  Score=495.47  Aligned_cols=218  Identities=44%  Similarity=0.726  Sum_probs=213.7

Q ss_pred             hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064           10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV   89 (229)
Q Consensus        10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   89 (229)
                      ++|+||++|++|+++++++++.|+++.|++|+|++|++|+|++|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus         2 ~il~Gk~~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   81 (285)
T PRK14191          2 VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLI   81 (285)
T ss_pred             eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            47999999999999999999999887789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064           90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR  169 (229)
Q Consensus        90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~  169 (229)
                      ++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||++||++|+++++||+
T Consensus        82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~  159 (285)
T PRK14191         82 KDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQ--LDGFVPATPMGVMRLLKHYHIEIKGKD  159 (285)
T ss_pred             HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999998  678999999999999999999999999


Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|||||.+||+|+|++|+++|||||+||++|+++.+++++|||||+|+|+|+|++++||
T Consensus       160 vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~AvG~p~~i~~~~v  219 (285)
T PRK14191        160 VVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMV  219 (285)
T ss_pred             EEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEecCCCCcCCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999986

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=4.2e-71  Score=493.24  Aligned_cols=220  Identities=46%  Similarity=0.775  Sum_probs=214.8

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      ||+++|||+++|++++++++++++.|+++ |++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++++||+
T Consensus         1 m~~~il~Gk~ia~~i~~~~~~~v~~l~~~-g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~   79 (286)
T PRK14175          1 MVAKILDGKQIAKDYRQGLQDQVEALKEK-GFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVL   79 (286)
T ss_pred             CCCeEeeHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            56779999999999999999999999877 89999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||.||+++|++|+++++
T Consensus        80 ~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~l~  157 (286)
T PRK14175         80 NELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADIDLE  157 (286)
T ss_pred             HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999999999999999999999998  578999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||++||+|+|++|.++|||||+|||+|+++.+++++|||||+|+|+|++|+++|+
T Consensus       158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsAvg~p~~i~~~~v  220 (286)
T PRK14175        158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKDVV  220 (286)
T ss_pred             CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEECCCCCcccCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999886

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.4e-70  Score=487.72  Aligned_cols=220  Identities=49%  Similarity=0.784  Sum_probs=215.1

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      |+++||||++|++++++++++++.+++++|++|+||+|++|+|++|..|+++|.|+|+++||++++++||++++++||++
T Consensus         1 ~~~ildGk~ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~   80 (284)
T PRK14179          1 MTEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLD   80 (284)
T ss_pred             CCeEEEhHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            46799999999999999999999999887899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG  167 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g  167 (229)
                      .|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||++||++|+++++|
T Consensus        81 ~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~G  158 (284)
T PRK14179         81 LIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSG--RPVMIPCTPAGIMEMFREYNVELEG  158 (284)
T ss_pred             HHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999988  6889999999999999999999999


Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|+|||+|++||+|+|.+|+++|||||+||++|+++.+++++|||||+|+|+|++|+.+|+
T Consensus       159 k~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg~~~~v~~~~i  220 (284)
T PRK14179        159 KHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFV  220 (284)
T ss_pred             CEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecCccccCCHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999885

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=5.6e-70  Score=487.85  Aligned_cols=219  Identities=51%  Similarity=0.785  Sum_probs=213.2

Q ss_pred             hcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHH
Q 027064           11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVH   90 (229)
Q Consensus        11 il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~   90 (229)
                      +|+|+++|++++++++++++.|+++.|++|+||+|++|+||+|..|+++|.|+|+++||++++++||++++|+||++.|+
T Consensus         3 il~Gk~iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~   82 (295)
T PRK14174          3 IIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIE   82 (295)
T ss_pred             EEeHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence            79999999999999999999998877899999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeE
Q 027064           91 ELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRA  170 (229)
Q Consensus        91 ~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v  170 (229)
                      +||+|++|||||||+|||+|+|++.++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||+++|++|+++++||+|
T Consensus        83 ~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~v  162 (295)
T PRK14174         83 DLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHC  162 (295)
T ss_pred             HHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEE
Confidence            99999999999999999999999999999999999999999999999988434789999999999999999999999999


Q ss_pred             EEEccchhhhHHHHHHHhh----CCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          171 VVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       171 ~ViG~s~~VG~pla~~L~~----~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +|||||.+||+|+++||++    +|+||++||++|.++.+++++|||||+|+|+|+||+++||
T Consensus       163 vViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Avg~~~li~~~~v  225 (295)
T PRK14174        163 VVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMV  225 (295)
T ss_pred             EEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEecCccCccCHHHc
Confidence            9999999999999999998    7999999999999999999999999999999999999986

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=5e-69  Score=482.34  Aligned_cols=220  Identities=47%  Similarity=0.760  Sum_probs=214.9

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      ||+++|+||++|++++++++++++.|+++ |++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++++||+
T Consensus         2 m~~~il~Gk~iA~~i~~~lk~~i~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~   80 (301)
T PRK14194          2 MSAKLIDGKAAAARVLAQVREDVRTLKAA-GIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLL   80 (301)
T ss_pred             CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            66779999999999999999999999887 89999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||++||++|+++++
T Consensus        81 ~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~  158 (301)
T PRK14194         81 ALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQG--RDVLTPCTPSGCLRLLEDTCGDLT  158 (301)
T ss_pred             HHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999999999999999999999999999998  578999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||+|++||+|+|.+|+++|+|||+||++|+++.+++++|||||+|+|+|++|+++|+
T Consensus       159 Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~v~~~~i  221 (301)
T PRK14194        159 GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWL  221 (301)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhcccHhhc
Confidence            999999999999999999999999999999999999999999999999999999999998885

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=4.4e-69  Score=478.28  Aligned_cols=213  Identities=50%  Similarity=0.779  Sum_probs=209.1

Q ss_pred             hcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHH
Q 027064           11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVH   90 (229)
Q Consensus        11 il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~   90 (229)
                      +|||+++|++++++++++++++    +++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++++||++.|+
T Consensus         2 il~Gk~~a~~i~~~~~~~v~~l----g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~   77 (279)
T PRK14178          2 ILDGKAVSEKRLELLKEEIIES----GLYPRLATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIR   77 (279)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHh----CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence            7999999999999999999887    789999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeE
Q 027064           91 ELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRA  170 (229)
Q Consensus        91 ~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v  170 (229)
                      +||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||++||++|+++++||+|
T Consensus        78 ~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~V  155 (279)
T PRK14178         78 RLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFHPLNLGRLVSG--LPGFAPCTPNGIMTLLHEYKISIAGKRA  155 (279)
T ss_pred             HHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCEE
Confidence            99999999999999999999999999999999999999999999999988  5889999999999999999999999999


Q ss_pred             EEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          171 VVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       171 ~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +|+|||..||+|+|++|+++|||||+|||+|+++.+++++|||||+|+|+|+||+++|+
T Consensus       156 ~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~Avgk~~lv~~~~v  214 (279)
T PRK14178        156 VVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSAAGKAGFITPDMV  214 (279)
T ss_pred             EEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEECCCcccccCHHHc
Confidence            99999999999999999999999999999999999999999999999999999999986

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.9e-67  Score=472.06  Aligned_cols=220  Identities=50%  Similarity=0.773  Sum_probs=214.4

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      |+.+|||+++|++|+++++++++.|+++.|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++++||++
T Consensus         1 ~~~il~Gk~~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   80 (296)
T PRK14188          1 MATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLA   80 (296)
T ss_pred             CCEEEEHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            46789999999999999999999998877899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG  167 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g  167 (229)
                      .|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||++||++|+++++|
T Consensus        81 ~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~~~G  158 (296)
T PRK14188         81 LIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATG--ETALVPCTPLGCMMLLRRVHGDLSG  158 (296)
T ss_pred             HHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999998  6889999999999999999999999


Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|+|||||++||+|+|.+|+++|++|++||++|+++.+++++|||||+|+|+|++|+.+|+
T Consensus       159 k~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsavg~~~~v~~~~l  220 (296)
T PRK14188        159 LNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWI  220 (296)
T ss_pred             CEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhhcchhee
Confidence            99999999999999999999999999999999999999999999999999999999998874

>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]

Probab=100.00  E-value=5.3e-65  Score=478.89  Aligned_cols=223  Identities=50%  Similarity=0.789  Sum_probs=219.7

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcC-CCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAEL   85 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~-~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el   85 (229)
                      |++.||+|+.+|++++++++++++.++++. +++|.|+|||||++++|..|+|+|.|+|++.||++.+++||+++++-||
T Consensus         1 ~~a~IL~Gk~la~kvr~~v~~eI~~ik~~~PnF~p~LaIiQVGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~el   80 (935)
T KOG4230|consen    1 MVAEILSGKELARKVREDVAEEIQSIKEHHPNFKPVLAIIQVGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGEL   80 (935)
T ss_pred             CcchhhccHHHHHHHHHHHHHHHHHHHhhCCCCCceEEEEEecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHH
Confidence            678999999999999999999999999887 8999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCC
Q 027064           86 ISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTI  165 (229)
Q Consensus        86 ~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l  165 (229)
                      +..|.+||+|+.|||||||+|||.|+|++.+.++|+|+||||||+++|.|+|..++.++.|+||||.||++||+++++.+
T Consensus        81 l~~I~~lNeD~tvHGiiVQLPLp~hide~~Vt~aI~peKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a~v~v  160 (935)
T KOG4230|consen   81 LREIKALNEDPTVHGIIVQLPLPAHIDEDTVTEAIDPEKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEAGVFV  160 (935)
T ss_pred             HHHHHhccCCCccceEEEeccCccccchhhHhhccCcccccccccccchhhhhccCCCceeeccChHHHHHHHHHcCCcc
Confidence            99999999999999999999999999999999999999999999999999999988899999999999999999999999


Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +||++||+|||.+||.|++.+|...|+|||+|||+|+++.+++.+|||||+|+|.|+|+++||+
T Consensus       161 ~Gk~aVVlGRS~IVG~Pia~LL~~~NaTVTiCHSKT~~lae~v~~ADIvIvAiG~PefVKgdWi  224 (935)
T KOG4230|consen  161 AGKNAVVLGRSKIVGSPIAALLLWANATVTICHSKTRNLAEKVSRADIVIVAIGQPEFVKGDWI  224 (935)
T ss_pred             ccceeEEEecccccCChHHHHHHhcCceEEEecCCCccHHHHhccCCEEEEEcCCcceeecccc
Confidence            9999999999999999999999999999999999999999999999999999999999999996

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.4e-62  Score=437.43  Aligned_cols=221  Identities=42%  Similarity=0.728  Sum_probs=214.6

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      ||+++||||++|++++++++++++.|+++.+++|+|++|++|+||+|..|++.|.++|+++||+++++.||+++++++|.
T Consensus         1 ~~~~~l~gk~~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~   80 (283)
T PRK14192          1 MMALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLL   80 (283)
T ss_pred             CCCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHH
Confidence            45679999999999999999999999988789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|+++|||+||+|||+|++++++++.|+|.|||||+|+.|.|+++.|  ++.|.||||.|++++|++|+++++
T Consensus        81 ~~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I~~aKDVdg~n~~n~G~l~~~--~~~~~p~T~~gii~~L~~~~i~l~  158 (283)
T PRK14192         81 AKIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMRLLKAYNIELA  158 (283)
T ss_pred             HHHHHHhCCCCCCEEEEeCCCccccCHHHHHhccCHHHhcCCCCccccCccccC--CCcccCCcHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999999999999999999999988  688999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||++||+|++++|+++|||||+|||+|+++.+.+++|||||+|||+|++|+.+|+
T Consensus       159 Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~~~~~aDIvI~AtG~~~~v~~~~l  221 (283)
T PRK14192        159 GKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPELVKQADIIVGAVGKPELIKKDWI  221 (283)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHHHhccCCEEEEccCCCCcCCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999998875

>KOG0089 consensus Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase [Coenzyme transport and metabolism]

Probab=100.00  E-value=2e-59  Score=409.17  Aligned_cols=222  Identities=55%  Similarity=0.874  Sum_probs=215.1

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      ++.+++|+.+|+.+++++.++++.+++.++..|+|+.++||+||+|..|+.+|.|+|+++||.+..+.||++.+++++++
T Consensus         7 ~~~viagk~~a~~i~~~i~~e~~~~~~~~g~~P~L~~~lvg~~pas~~Ya~~k~kac~~vGi~s~~~~l~~~~~~~~l~~   86 (309)
T KOG0089|consen    7 TAVVIAGKVAATFIRQEIANEVEGMKESNGKVPGLVGFLVGEDPASQMYATNKTKACEEVGIKSFQYELPESESEDELES   86 (309)
T ss_pred             ceEEEehhHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEeCCCcchHHHHHHHHHHHHHhhhcccccccccccCHHHHHH
Confidence            47899999999999999999999999998999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG  167 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g  167 (229)
                      .|.++|+|++||||+||+|+|.|+++++++++++|+|||||||+.|.|+|...+..+.|+||||.||+++|+++++.+.|
T Consensus        87 ~i~~~N~d~sV~GilV~~pv~~h~~eq~i~n~Vs~eKDVDgfh~~Nigrl~ld~~~~~~lPcTP~gv~eiL~r~gI~~~G  166 (309)
T KOG0089|consen   87 AIAEANNDPSVHGILVQLPVPQHIQEQYILNAVSPEKDVDGFHPLNIGRLALDGREPLFLPCTPLGVVEILERTGIETYG  166 (309)
T ss_pred             HHHHhcCCCceeeEEEEeeccccccHHHHHhhcCcccccccccccchhhhccccccccccCCchHHHHHHHHHhCCeecC
Confidence            99999999999999999999999999999999999999999999999999988667889999999999999999999999


Q ss_pred             CeEEEEccchhhhHHHHHHHhhC--------CCEEEEEcCCCCC--HHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA--------DATVTIVHSHTTD--PESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~--------~atVtv~~~~t~~--l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+++|+|||++||+|+|++|++.        +||||++||.|+.  ++.+++.|||+|+|+|.|++|++|||
T Consensus       167 Kn~VVigRS~iVg~P~A~LL~~dG~~~~~~~datVti~hr~t~~~~lk~ht~~adivi~a~g~p~li~~d~I  238 (309)
T KOG0089|consen  167 KNAVVIGRSKIVGMPLALLLHNDGAHVYSVDDATVTIFHRYTSKPQLKHHTRDADIVISAVGIPNLITSDMI  238 (309)
T ss_pred             ceEEEEcccccccchHHHHHhhcCCcccccCcceEEEEEcCCCchhHHHHHHhcceeehhcCCCccccccee
Confidence            99999999999999999999998        8899999999864  58999999999999999999999996

>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=100.00  E-value=5.1e-37  Score=241.61  Aligned_cols=117  Identities=53%  Similarity=0.807  Sum_probs=103.3

Q ss_pred             hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064           10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV   89 (229)
Q Consensus        10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   89 (229)
                      ++|+|+++|++|+++++++++.|+++ |++|+|++|++|+|++|..|+++|.|.|+++||+++.+.||+++++++|++.|
T Consensus         1 ~iL~Gk~va~~i~~~l~~~i~~l~~~-~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i   79 (117)
T PF00763_consen    1 KILDGKPVAKEIKEELKEEIEKLKEK-GITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELI   79 (117)
T ss_dssp             EE--HHHHHHHHHHHHHHHHHHHHHC-T---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHH
T ss_pred             CeeeHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHH
Confidence            37999999999999999999999988 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccc
Q 027064           90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD  127 (229)
Q Consensus        90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVD  127 (229)
                      ++||+|++|||||||+|||+|+|++.++++|+|+||||
T Consensus        80 ~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVD  117 (117)
T PF00763_consen   80 EKLNEDPSVHGILVQLPLPKHIDERKILEAIDPEKDVD  117 (117)
T ss_dssp             HHHHH-TT-SEEEEESSSSTTSHHHHHHHTS-GGGBTT
T ss_pred             HHHhCCCCCCEEEEcCCCCCCccHHHHHhccCcccCCC
Confidence            99999999999999999999999999999999999998

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=100.00  E-value=3.6e-36  Score=254.64  Aligned_cols=108  Identities=31%  Similarity=0.479  Sum_probs=100.1

Q ss_pred             ccCcccccCccchhhhhccCC-------CCCcccCCHHHHHHHHHHhCC---------CCCCCeEEEEccchhhhHHHHH
Q 027064          122 LEKDVDGFHPLNIGKLAMKGR-------DPLFLPCTPKGCLELLKRSGV---------TIKGKRAVVVGRSNIVGLPVSL  185 (229)
Q Consensus       122 p~KDVDg~~~~N~g~l~~~~~-------~~~~~PcTa~av~~lL~~~~~---------~l~gk~v~ViG~s~~VG~pla~  185 (229)
                      |+|||||+|+.|+|+|+.|..       .+.|+||||+||++||++|++         +++||+|+|||||++||+|+|+
T Consensus         1 P~KDVDGl~~~n~g~l~~~~~~~~~~~~~~~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~   80 (197)
T cd01079           1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAA   80 (197)
T ss_pred             CCCCcCCCCHHHHHHHhcCCccccccccCCCccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHH
Confidence            799999999999999998731       168999999999999999976         8999999999999999999999


Q ss_pred             HHhhCCCEEEEE---------------cCCC--CC----HHhhhccCcEEEEecCCCCC-CCCCCC
Q 027064          186 LLLKADATVTIV---------------HSHT--TD----PESIVREADIVIAAAGQAMM-VTMGIL  229 (229)
Q Consensus       186 ~L~~~~atVtv~---------------~~~t--~~----l~~~~~~aDivisA~g~p~~-i~~~~v  229 (229)
                      ||+++|||||+|               |++|  ++    +.+++++|||||+|+|+|+| |++|||
T Consensus        81 lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~i  146 (197)
T cd01079          81 LLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELL  146 (197)
T ss_pred             HHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHc
Confidence            999999999999               7777  46    78999999999999999999 999986

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=100.00  E-value=2.5e-33  Score=231.64  Aligned_cols=98  Identities=49%  Similarity=0.846  Sum_probs=86.2

Q ss_pred             CccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhc
Q 027064          130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVR  209 (229)
Q Consensus       130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~  209 (229)
                      ||+|+|+|+.+  ++.|+||||+||++||++|+++++||+|+|||||.+||+|+++||+++|||||+||++|++++++++
T Consensus         1 hp~N~g~l~~~--~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~   78 (160)
T PF02882_consen    1 HPLNLGRLVSG--QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR   78 (160)
T ss_dssp             SHHHHHHHHTT--TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred             CcHhHHHHhCC--CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence            78999999998  7899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcEEEEecCCCCCCCCCCC
Q 027064          210 EADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       210 ~aDivisA~g~p~~i~~~~v  229 (229)
                      +|||||+|+|+|+||+++||
T Consensus        79 ~ADIVVsa~G~~~~i~~~~i   98 (160)
T PF02882_consen   79 RADIVVSAVGKPNLIKADWI   98 (160)
T ss_dssp             TSSEEEE-SSSTT-B-GGGS
T ss_pred             eccEEeeeeccccccccccc
Confidence            99999999999999999996

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=99.93  E-value=2.6e-26  Score=191.26  Aligned_cols=106  Identities=54%  Similarity=0.892  Sum_probs=101.2

Q ss_pred             ccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          122 LEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       122 p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      |+|||||++..|+|+++.+  ...|+||||.|++++++++..++.||+|+|||+|+++|++++.+|.++|++|+++|+++
T Consensus         1 ~~kdvdg~~~~~~~~~~~~--~~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080           1 PEKDVDGLHPVNLGRLALG--RPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCccccCCCccchhhHhcC--CCCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            7899999999999999987  57899999999999999999999999999999999899999999999999999999999


Q ss_pred             CCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          202 TDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 ~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      .++.+.+++||+||+|||+|++|+.+|+
T Consensus        79 ~~l~~~l~~aDiVIsat~~~~ii~~~~~  106 (168)
T cd01080          79 KNLKEHTKQADIVIVAVGKPGLVKGDMV  106 (168)
T ss_pred             hhHHHHHhhCCEEEEcCCCCceecHHHc
Confidence            9999999999999999999998887764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=99.93  E-value=2.4e-26  Score=186.26  Aligned_cols=87  Identities=37%  Similarity=0.547  Sum_probs=84.7

Q ss_pred             CCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCC
Q 027064          143 DPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       143 ~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~  222 (229)
                      .+.|+||||+|++++|++|+++++||+|+|+|||..||+|++.+|+++|++|++||++|+++.+++++|||||+|+|+|+
T Consensus         4 ~~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~~   83 (140)
T cd05212           4 TPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKPE   83 (140)
T ss_pred             CCcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCCCC
Confidence            47799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC
Q 027064          223 MVTMGIL  229 (229)
Q Consensus       223 ~i~~~~v  229 (229)
                      +|+++|+
T Consensus        84 ~i~~~~i   90 (140)
T cd05212          84 KVPTEWI   90 (140)
T ss_pred             ccCHHHc
Confidence            9999986

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=99.50  E-value=2.8e-13  Score=121.15  Aligned_cols=169  Identities=15%  Similarity=0.151  Sum_probs=125.6

Q ss_pred             EEECCCcccHH-HHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-
Q 027064           45 VIVGGRKDSQS-YVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-  122 (229)
Q Consensus        45 I~vg~~~~s~~-Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-  122 (229)
                      -.+|+ |-+++ .=..-...++++|++..|..++.. +.++|.+.++.+..  ++.|++|++|++     ..++..+|. 
T Consensus         9 ~liG~-Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~-~~~~l~~~~~~~~~--~~~G~nVT~P~K-----~~~~~~~d~~   79 (282)
T TIGR01809         9 FIIGK-PIAHSRSPHLHNAGYEILGLPDKTYEFETC-SAEELKEVLSGFGP--QFGGASVTIPLK-----FAILRFADEH   79 (282)
T ss_pred             EEEcC-CchhccCHHHHHHHHHHcCCCcEEEeeecC-CHHHHHHHHHhcCC--CCcEEEECCCCH-----HHHHHHhhcC
Confidence            44575 43333 334556789999999999998732 35789999998843  799999999999     567777765 


Q ss_pred             cCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCC--CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          123 EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGV--TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       123 ~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~--~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .....-+.++|+-....++ .-.-.+++..|+++.|++.+.  +++||+|+|||+|++ ||.++..|...|+ +|++++|
T Consensus        80 ~~~A~~iGAVNTv~~~~~g-~l~G~NTD~~G~~~~l~~~~~~~~~~~k~vlvlGaGGa-arai~~aL~~~G~~~i~I~nR  157 (282)
T TIGR01809        80 TDRASLIGSVNTLLRTQNG-IWKGDNTDWDGIAGALANIGKFEPLAGFRGLVIGAGGT-SRAAVYALASLGVTDITVINR  157 (282)
T ss_pred             CHHHHHhCceeEEEEcCCC-cEEEecCCHHHHHHHHHhhCCccccCCceEEEEcCcHH-HHHHHHHHHHcCCCeEEEEeC
Confidence            4556778889984321121 222349999999999998874  689999999999997 9999999999998 7999988


Q ss_pred             CCC---C-------------------HHhhhccCcEEEEecCCCCCC
Q 027064          200 HTT---D-------------------PESIVREADIVIAAAGQAMMV  224 (229)
Q Consensus       200 ~t~---~-------------------l~~~~~~aDivisA~g~p~~i  224 (229)
                      ...   .                   +...+.++|+||+||+....+
T Consensus       158 t~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~  204 (282)
T TIGR01809       158 NPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPA  204 (282)
T ss_pred             CHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCC
Confidence            521   1                   113346789999999876544

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=99.47  E-value=2.4e-13  Score=121.01  Aligned_cols=154  Identities=21%  Similarity=0.275  Sum_probs=120.4

Q ss_pred             HHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhh
Q 027064           58 SMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGK  136 (229)
Q Consensus        58 ~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~  136 (229)
                      ..-..+++++|+++.|..|+  +..++|.+.++.+... ++.|++|++|++     +.++.++|. ...+.-+.++|+-.
T Consensus        22 ~~hn~~~~~~gl~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K-----~~~~~~~d~~~~~A~~igavNtv~   93 (278)
T PRK00258         22 LIHNAAFKQLGLDGVYLAIL--VPPEDLEDAVKGFFAL-GGRGANVTVPFK-----EAAFALADELSERARLIGAVNTLV   93 (278)
T ss_pred             HHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhC-CCCEEEECcCCH-----HHHHHHhhcCCHHHHHhCCceEEE
Confidence            34588999999999999887  6778898999888765 799999999998     566666665 44556678888854


Q ss_pred             hhccCCCCCcccCCHHHHHHHHHH-hCCCCCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCCC---H-------
Q 027064          137 LAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTTD---P-------  204 (229)
Q Consensus       137 l~~~~~~~~~~PcTa~av~~lL~~-~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~~---l-------  204 (229)
                       ..++ .-.-.+++..|++..|++ .+.++.||+|+|+|+|++ |+.++..|...| +.|++++++...   +       
T Consensus        94 -~~~g-~l~G~NTD~~G~~~~l~~~~~~~~~~k~vlVlGaGg~-a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~  170 (278)
T PRK00258         94 -LEDG-RLIGDNTDGIGFVRALEERLGVDLKGKRILILGAGGA-ARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL  170 (278)
T ss_pred             -eeCC-EEEEEcccHHHHHHHHHhccCCCCCCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence             2221 222349999999999997 567899999999999996 999999999999 589999885321   1       


Q ss_pred             ---------HhhhccCcEEEEecCCCC
Q 027064          205 ---------ESIVREADIVIAAAGQAM  222 (229)
Q Consensus       205 ---------~~~~~~aDivisA~g~p~  222 (229)
                               .+.+..+|+||+||+..-
T Consensus       171 ~~~~~~~~~~~~~~~~DivInaTp~g~  197 (278)
T PRK00258        171 GKAELDLELQEELADFDLIINATSAGM  197 (278)
T ss_pred             cceeecccchhccccCCEEEECCcCCC
Confidence                     133467899999998653

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=99.46  E-value=1.1e-12  Score=117.64  Aligned_cols=171  Identities=17%  Similarity=0.177  Sum_probs=126.4

Q ss_pred             CCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC---CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHH
Q 027064           39 VPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ---VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEK  115 (229)
Q Consensus        39 ~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~---~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~  115 (229)
                      .|++.. .+|+.-+-...=..-..+++++|+++.|..|+-.   ++.++|.+.++.+... ++.|++|++|++     +.
T Consensus         4 ~~~~~~-liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~~-~~~G~nVTiP~K-----~~   76 (284)
T PRK12549          4 PSFLAG-LIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAERM-GFAGLNITHPCK-----QA   76 (284)
T ss_pred             cceEEE-EECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHhc-CCCEEEECcCCH-----HH
Confidence            344433 3465333333445667889999999999998732   3467888888888644 799999999998     57


Q ss_pred             HHhcCCc-cCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-E
Q 027064          116 VLGEISL-EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-T  193 (229)
Q Consensus       116 i~~~I~p-~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-t  193 (229)
                      ++..+|. ...+.-+.++|+-.. .++ .-.-.+++..|+++.|+....++++|+|+|+|+|++ |+.++..|...|+ +
T Consensus        77 v~~~~D~~~~~A~~iGAvNTv~~-~~g-~l~G~NTD~~G~~~~l~~~~~~~~~k~vlIlGaGGa-araia~aL~~~G~~~  153 (284)
T PRK12549         77 VIPHLDELSDDARALGAVNTVVF-RDG-RRIGHNTDWSGFAESFRRGLPDASLERVVQLGAGGA-GAAVAHALLTLGVER  153 (284)
T ss_pred             HHHHhccCCHHHHHhCCceEEEe-cCC-EEEEEcCCHHHHHHHHHhhccCccCCEEEEECCcHH-HHHHHHHHHHcCCCE
Confidence            7777665 445666888888532 221 222349999999999998777889999999999996 9999999999998 7


Q ss_pred             EEEEcCCCC----------------------CHHhhhccCcEEEEecC
Q 027064          194 VTIVHSHTT----------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       194 Vtv~~~~t~----------------------~l~~~~~~aDivisA~g  219 (229)
                      |+++++...                      ++.+.++++|+||+||.
T Consensus       154 I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp  201 (284)
T PRK12549        154 LTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATP  201 (284)
T ss_pred             EEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCc
Confidence            999988531                      11234567999999975

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=99.44  E-value=1.5e-12  Score=117.03  Aligned_cols=144  Identities=15%  Similarity=0.148  Sum_probs=113.9

Q ss_pred             EECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064           46 IVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK  124 (229)
Q Consensus        46 ~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K  124 (229)
                      .+|+.-+-...=..-..+++++|+++.|..++  ++.++|.+.++.+... ++.|++|++|++     ..++..+|. ..
T Consensus        12 liG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~l~~~-~~~G~nVTiP~K-----~~~~~~~D~l~~   83 (288)
T PRK12749         12 LMAYPIRHSLSPEMQNKALEKAGLPFTYMAFE--VDNDSFPGAIEGLKAL-KMRGTGVSMPNK-----QLACEYVDELTP   83 (288)
T ss_pred             EECCCcccccCHHHHHHHHHHcCCCeEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCH-----HHHHHHhccCCH
Confidence            34653222223346678899999999999987  7778898888888655 699999999998     577777776 55


Q ss_pred             cccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       125 DVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      ...-+.++|+-.. .++ .-.-.+++..|+++.|++.+.+++||+|+|+|+|+. +|.++..|...|+ .+++++|+
T Consensus        84 ~A~~iGAVNTv~~-~~g-~l~G~NTD~~Gf~~~l~~~~~~~~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~nRt  157 (288)
T PRK12749         84 AAKLVGAINTIVN-DDG-YLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRR  157 (288)
T ss_pred             HHHHhCceeEEEc-cCC-EEEEEecCHHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence            6677889998532 221 222349999999999999999999999999999997 9999999999998 79999886

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=99.42  E-value=1.5e-12  Score=116.69  Aligned_cols=144  Identities=14%  Similarity=0.193  Sum_probs=112.9

Q ss_pred             EECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064           46 IVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK  124 (229)
Q Consensus        46 ~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K  124 (229)
                      .+|+.-+....=..-..+++++|+++.|..|+  +..++|.+.++.+... ++.|++|++|++     +.++..+|. ..
T Consensus        14 liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K-----~~v~~~ld~~~~   85 (289)
T PRK12548         14 LIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFD--IPVDKVPDAIKAIKTF-NMRGANVTMPCK-----SEAAKYMDELSP   85 (289)
T ss_pred             EEcCCcccccCHHHHHHHHHHcCCCEEEEEEe--cCHHHHHHHHHHHHHC-CCCEEEECccCH-----HHHHHHhhcCCH
Confidence            34653322223345667799999999999998  6778888888888654 799999999998     577777776 55


Q ss_pred             cccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCC
Q 027064          125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSH  200 (229)
Q Consensus       125 DVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~  200 (229)
                      .+.-+.++|+-.. .++ .-.-.+++..|+++.|++++.+++||+++|+|+|++ |+.++..|...|++ |+++++.
T Consensus        86 ~A~~iGavNTi~~-~~g-~l~G~NTD~~G~~~~l~~~~~~~~~k~vlI~GAGGa-grAia~~La~~G~~~V~I~~R~  159 (289)
T PRK12548         86 AARIIGAVNTIVN-DDG-KLTGHITDGLGFVRNLREHGVDVKGKKLTVIGAGGA-ATAIQVQCALDGAKEITIFNIK  159 (289)
T ss_pred             HHHHhCceeEEEe-ECC-EEEEEecCHHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence            6777889998522 221 222349999999999999888899999999999986 99999999999996 9999875

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=99.40  E-value=1.3e-12  Score=115.61  Aligned_cols=153  Identities=18%  Similarity=0.225  Sum_probs=118.3

Q ss_pred             HHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhh
Q 027064           58 SMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGK  136 (229)
Q Consensus        58 ~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~  136 (229)
                      ..-...++++|+++.|..|+  +..++|.+.++.+... ++.|++|++|++     +.++..+|. ...+.-+..+|+-.
T Consensus        17 ~~hn~~~~~~g~~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K-----~~~~~~~d~~~~~A~~~gavNti~   88 (270)
T TIGR00507        17 LIHNAFFKQLGLEGPYIAFL--VPPDDLEDALSGFFAL-GFKGANVTSPFK-----EEAFQFLDEIDERAKLAGAVNTLK   88 (270)
T ss_pred             HHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCH-----HHHHHHhhhCCHHHHHhCCceEEE
Confidence            45677899999999999987  6778888888888755 799999999998     566666655 44556678888854


Q ss_pred             hhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH------------
Q 027064          137 LAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP------------  204 (229)
Q Consensus       137 l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l------------  204 (229)
                       ..++ .-.-.+++..|+++.|++.+....+|+++|+|.|++ |++++..|...|+.|+++++.....            
T Consensus        89 -~~~g-~l~g~NTD~~G~~~~l~~~~~~~~~k~vliiGaGg~-g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~  165 (270)
T TIGR00507        89 -LEDG-KLVGYNTDGIGLVSDLERLIPLRPNQRVLIIGAGGA-ARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE  165 (270)
T ss_pred             -eeCC-EEEEEcCCHHHHHHHHHhcCCCccCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc
Confidence             2221 222349999999999998766778999999999975 9999999999999999998753211            


Q ss_pred             ------H-hhhccCcEEEEecCCC
Q 027064          205 ------E-SIVREADIVIAAAGQA  221 (229)
Q Consensus       205 ------~-~~~~~aDivisA~g~p  221 (229)
                            . ....++|+||++|+..
T Consensus       166 ~~~~~~~~~~~~~~DivInatp~g  189 (270)
T TIGR00507       166 IQAFSMDELPLHRVDLIINATSAG  189 (270)
T ss_pred             eEEechhhhcccCccEEEECCCCC
Confidence                  1 1124789999999863

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=99.38  E-value=2.5e-12  Score=115.39  Aligned_cols=152  Identities=22%  Similarity=0.290  Sum_probs=120.6

Q ss_pred             HHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhh
Q 027064           58 SMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGK  136 (229)
Q Consensus        58 ~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~  136 (229)
                      ..-...++.+|+++.|..++  +..++|.+.++.+- +..+.|.+|++|++     ++++..+|- ..+..-++++|+-.
T Consensus        23 ~~Hn~~~~~lGl~~~Y~a~~--v~~~~l~~~v~~~~-~~g~~G~NVTiP~K-----e~~~~~lD~l~~~A~~iGAVNTl~   94 (283)
T COG0169          23 RMHNAAFRALGLDYVYLAFE--VPPEDLPEAVSGIR-ALGFRGLNVTIPFK-----EAALPLLDELSPRARLIGAVNTLV   94 (283)
T ss_pred             HHHHHHHHHcCCCceEEEee--cCHHHHHHHHHHHH-hcCCCeeEECCccH-----HHHHHHHhcCCHHHHHhCCceEEE
Confidence            45678899999999999998  66899999999998 66899999999998     566666554 55677789999854


Q ss_pred             hhccCCCCCcccCCHHHHHHHHHHhC--CCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC---CHH-----
Q 027064          137 LAMKGRDPLFLPCTPKGCLELLKRSG--VTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT---DPE-----  205 (229)
Q Consensus       137 l~~~~~~~~~~PcTa~av~~lL~~~~--~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~---~l~-----  205 (229)
                      .-.++ .-.-.+++..|+++.|++++  .+.+|++|+|+|+|++ +|.++..|++.|+ +++|+||+..   .+.     
T Consensus        95 ~~~~g-~l~G~NTD~~G~~~~L~~~~~~~~~~~~~vlilGAGGA-arAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~  172 (283)
T COG0169          95 REDDG-KLRGYNTDGIGFLRALKEFGLPVDVTGKRVLILGAGGA-ARAVAFALAEAGAKRITVVNRTRERAEELADLFGE  172 (283)
T ss_pred             EccCC-EEEEEcCCHHHHHHHHHhcCCCcccCCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence            43211 22235999999999999987  5667999999999998 9999999999997 7999999642   111     


Q ss_pred             -------------hhhccCcEEEEecC
Q 027064          206 -------------SIVREADIVIAAAG  219 (229)
Q Consensus       206 -------------~~~~~aDivisA~g  219 (229)
                                   +...++|+||+||+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~dliINaTp  199 (283)
T COG0169         173 LGAAVEAAALADLEGLEEADLLINATP  199 (283)
T ss_pred             cccccccccccccccccccCEEEECCC
Confidence                         11115899999997

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=99.37  E-value=5.7e-12  Score=112.99  Aligned_cols=165  Identities=16%  Similarity=0.162  Sum_probs=121.9

Q ss_pred             ECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC---CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-
Q 027064           47 VGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ---VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-  122 (229)
Q Consensus        47 vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~---~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-  122 (229)
                      +|+.-+....=..-..+++++|+++.|..|+-.   ++.++|.+.++.+... ++.|++|++|++     +.++..+|. 
T Consensus        10 iG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~-~~~G~nVT~P~K-----~~~~~~lD~l   83 (283)
T PRK14027         10 IGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYL-GFNGLNITHPYK-----QAVLPLLDEV   83 (283)
T ss_pred             ECCCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhc-CCCEEEECccCH-----HHHHHHhhhC
Confidence            354332222334567789999999999998732   3457888888877654 799999999998     567776665 


Q ss_pred             cCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC
Q 027064          123 EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT  201 (229)
Q Consensus       123 ~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t  201 (229)
                      ...+.-+.++|+-....++ .-.-.+++..|+++.|++.+.+++||+|+|+|+|++ ||.++..|...|+ .++++++..
T Consensus        84 ~~~A~~iGAVNTv~~~~~g-~l~G~NTD~~Gf~~~L~~~~~~~~~k~vlilGaGGa-arAi~~aL~~~g~~~i~i~nR~~  161 (283)
T PRK14027         84 SEQATQLGAVNTVVIDATG-HTTGHNTDVSGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVADLDT  161 (283)
T ss_pred             CHHHHHhCCceEEEECCCC-cEEEEcCCHHHHHHHHHhcCcCcCCCeEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCH
Confidence            4556678889984321121 222359999999999998666788999999999997 9999999999998 799998842


Q ss_pred             C---CH---------------------HhhhccCcEEEEecC
Q 027064          202 T---DP---------------------ESIVREADIVIAAAG  219 (229)
Q Consensus       202 ~---~l---------------------~~~~~~aDivisA~g  219 (229)
                      .   .+                     .+.+..+|+||+||.
T Consensus       162 ~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp  203 (283)
T PRK14027        162 SRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP  203 (283)
T ss_pred             HHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCC
Confidence            1   11                     112456899999986

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=99.36  E-value=8.4e-12  Score=111.38  Aligned_cols=167  Identities=15%  Similarity=0.157  Sum_probs=124.5

Q ss_pred             CCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHH
Q 027064           37 GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKV  116 (229)
Q Consensus        37 ~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i  116 (229)
                      +..++|..=.+|+ |-|.+-. .-..+++++|+++.|..|+    .++|.+.++.+... ++.|++|++|++     +.+
T Consensus         6 ~~~~~~~~gliG~-P~~~Sp~-ihn~~f~~~gl~~~Y~~~~----~~~l~~~~~~l~~~-~~~G~nVT~P~K-----~~~   73 (272)
T PRK12550          6 NKDTQLCISLAAR-PSNFGTR-FHNYLYEALGLNFLYKAFT----TTDLTAAIGGVRAL-GIRGCAVSMPFK-----EAV   73 (272)
T ss_pred             CCCceEEEEEEcc-chhcCHH-HHHHHHHHcCCCcEEEecC----HhHHHHHHHHHHhc-CCCEEEECcCCH-----HHH
Confidence            3456664555675 4666655 7888999999999999986    35677777777654 699999999998     566


Q ss_pred             HhcCCc-cCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EE
Q 027064          117 LGEISL-EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TV  194 (229)
Q Consensus       117 ~~~I~p-~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tV  194 (229)
                      +..+|. ...+.-+.++|+-.. .++ .-.-++++..|+++.|++.+.+ .+|+|+|+|+|+. +|.++..|...|+ .|
T Consensus        74 ~~~lD~l~~~A~~iGAVNTi~~-~~g-~l~G~NTD~~Gf~~~L~~~~~~-~~~~vlilGaGGa-arAi~~aL~~~g~~~i  149 (272)
T PRK12550         74 IPLVDELDPSAQAIESVNTIVN-TDG-HLKAYNTDYIAIAKLLASYQVP-PDLVVALRGSGGM-AKAVAAALRDAGFTDG  149 (272)
T ss_pred             HHHhhcCCHHHHHhCCeeEEEe-eCC-EEEEEecCHHHHHHHHHhcCCC-CCCeEEEECCcHH-HHHHHHHHHHCCCCEE
Confidence            766665 445667888998532 221 2223499999999999988775 4789999999997 9999999999998 59


Q ss_pred             EEEcCCCC---CHH--------hh--hccCcEEEEecC
Q 027064          195 TIVHSHTT---DPE--------SI--VREADIVIAAAG  219 (229)
Q Consensus       195 tv~~~~t~---~l~--------~~--~~~aDivisA~g  219 (229)
                      ++++|+..   .+.        +.  ...+|+||+||.
T Consensus       150 ~i~nR~~~~a~~la~~~~~~~~~~~~~~~~dlvINaTp  187 (272)
T PRK12550        150 TIVARNEKTGKALAELYGYEWRPDLGGIEADILVNVTP  187 (272)
T ss_pred             EEEeCCHHHHHHHHHHhCCcchhhcccccCCEEEECCc
Confidence            99998632   111        11  145899999986

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=99.29  E-value=3.5e-11  Score=114.97  Aligned_cols=165  Identities=18%  Similarity=0.253  Sum_probs=123.7

Q ss_pred             EECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064           46 IVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK  124 (229)
Q Consensus        46 ~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K  124 (229)
                      .+|+.-+-...=..-..+++++|+++.|..|+  +..++|.+.++.+... ++.|+.|++|++     ..++.++|. ..
T Consensus       220 liG~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K-----~~v~~~~d~~~~  291 (477)
T PRK09310        220 LIGDPVDRSISHLSHNPLFSQLSLNCPYIKLP--LTPQELPKFFSTIRDL-PFLGLSVTMPLK-----TAVLDFLDKLDP  291 (477)
T ss_pred             EECCCcccccCHHHHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHHhC-CCCEEEECccCH-----HHHHHHhccCCH
Confidence            55754332223345678899999999999987  6667787777777544 699999999998     566666665 44


Q ss_pred             cccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH
Q 027064          125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP  204 (229)
Q Consensus       125 DVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l  204 (229)
                      .+.-+.++|+-.. .++ .-.-.+++..|+++.|++.+.+++||+++|+|.|++ |++++..|.+.|++|+++++.....
T Consensus       292 ~A~~iGAVNTv~~-~~g-~l~G~NTD~~G~~~~l~~~~~~~~~k~vlIiGaGgi-G~aia~~L~~~G~~V~i~~R~~~~~  368 (477)
T PRK09310        292 SVKLCGSCNTLVF-RNG-KIEGYNTDGEGLFSLLKQKNIPLNNQHVAIVGAGGA-AKAIATTLARAGAELLIFNRTKAHA  368 (477)
T ss_pred             HHHHhCcceEEEe-eCC-EEEEEecCHHHHHHHHHhcCCCcCCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            5666788888432 221 222349999999999999999999999999999985 9999999999999999997753211


Q ss_pred             H----------------hhhccCcEEEEecCCC
Q 027064          205 E----------------SIVREADIVIAAAGQA  221 (229)
Q Consensus       205 ~----------------~~~~~aDivisA~g~p  221 (229)
                      .                ..+..+|+||+||+..
T Consensus       369 ~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g  401 (477)
T PRK09310        369 EALASRCQGKAFPLESLPELHRIDIIINCLPPS  401 (477)
T ss_pred             HHHHHHhccceechhHhcccCCCCEEEEcCCCC
Confidence            1                1146789999999754

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=99.07  E-value=2.3e-09  Score=103.74  Aligned_cols=144  Identities=17%  Similarity=0.208  Sum_probs=105.2

Q ss_pred             EECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064           46 IVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK  124 (229)
Q Consensus        46 ~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K  124 (229)
                      .+|..-+-..-=..-..+++++|+++.|..|+-    ++|.+.++.+.. .++.|+.|++|++     ..++.++|. ..
T Consensus       257 liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v----~~l~~~~~~l~~-~~~~G~nVTiP~K-----~~v~~~lD~~~~  326 (529)
T PLN02520        257 IIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLV----DDLAKFLQTYSS-PDFAGFSCTIPHK-----EDALKCCDEVDP  326 (529)
T ss_pred             EEcCCcccccCHHHHHHHHHHCCCCcEEEEeeh----hhHHHHHHHHhh-CCCCEEEECcCCH-----HHHHHHhccCCH
Confidence            557533322233566788999999999999973    356666666644 4799999999998     466666654 33


Q ss_pred             cccccCccchhhhhccCCCCCcccCCHHHHHHHHHHh----------CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEE
Q 027064          125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS----------GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATV  194 (229)
Q Consensus       125 DVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~----------~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atV  194 (229)
                      .+.-+.++|+-.....+..-.-.+++..|+++.|++.          +.+++||+|+|+|+|++ |++++..|.++|++|
T Consensus       327 ~A~~iGAVNTvv~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGa-grAia~~L~~~G~~V  405 (529)
T PLN02520        327 IAKSIGAINTIIRRPSDGKLVGYNTDYIGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGA-GKALAYGAKEKGARV  405 (529)
T ss_pred             HHHHhCCceEEEEeCCCCEEEEEcccHHHHHHHHHhhhcccccccccccCCCCCEEEEECCcHH-HHHHHHHHHHCCCEE
Confidence            4555788887432110112123499999999999863          45789999999999986 999999999999999


Q ss_pred             EEEcCC
Q 027064          195 TIVHSH  200 (229)
Q Consensus       195 tv~~~~  200 (229)
                      +++++.
T Consensus       406 ~i~nR~  411 (529)
T PLN02520        406 VIANRT  411 (529)
T ss_pred             EEEcCC
Confidence            999874

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=98.93  E-value=1e-09  Score=102.96  Aligned_cols=101  Identities=24%  Similarity=0.306  Sum_probs=81.2

Q ss_pred             HHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EE
Q 027064          116 VLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TV  194 (229)
Q Consensus       116 i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tV  194 (229)
                      ..++|.-.|-|---|.+|.|.+           .-+.+++++.++...++++|+|+|||+|++ |..++.+|.++|. .|
T Consensus       138 FqkAi~~gKrvRseT~I~~~~V-----------Si~saAv~lA~~~~~~L~~~~vlvIGAGem-~~lva~~L~~~g~~~i  205 (414)
T COG0373         138 FQKAISVGKRVRSETGIGKGAV-----------SISSAAVELAKRIFGSLKDKKVLVIGAGEM-GELVAKHLAEKGVKKI  205 (414)
T ss_pred             HHHHHHHHHHhhcccCCCCCcc-----------chHHHHHHHHHHHhcccccCeEEEEcccHH-HHHHHHHHHhCCCCEE
Confidence            3345666666665565555433           236899999999998999999999999997 9999999999996 79


Q ss_pred             EEEcCCCC-----------------CHHhhhccCcEEEEecCCCCCC-CCCC
Q 027064          195 TIVHSHTT-----------------DPESIVREADIVIAAAGQAMMV-TMGI  228 (229)
Q Consensus       195 tv~~~~t~-----------------~l~~~~~~aDivisA~g~p~~i-~~~~  228 (229)
                      ++|||+-.                 ++.+++.++||||||||.|++| +.++
T Consensus       206 ~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ii~~~~  257 (414)
T COG0373         206 TIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHPIITREM  257 (414)
T ss_pred             EEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCccccCHHH
Confidence            99998521                 4568899999999999999995 6554

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=98.88  E-value=6.7e-09  Score=76.85  Aligned_cols=65  Identities=32%  Similarity=0.506  Sum_probs=57.6

Q ss_pred             CCHHHHHHHHHHhC----CCCCCCeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCC
Q 027064          149 CTPKGCLELLKRSG----VTIKGKRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSHTTDPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       149 cTa~av~~lL~~~~----~~l~gk~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~  223 (229)
                      ||+.++++.|++..    .++++|+++|+|.|. +|++++.+|.+. +.+|+++++            |++|+++|.+++
T Consensus         1 ~t~~~~~~~l~~~~~~~~~~~~~~~v~i~G~G~-~g~~~a~~l~~~~~~~v~v~~r------------di~i~~~~~~~~   67 (86)
T cd05191           1 ATAAGAVALLKAAGKVTNKSLKGKTVVVLGAGE-VGKGIAKLLADEGGKKVVLCDR------------DILVTATPAGVP   67 (86)
T ss_pred             ChhHHHHHHHHHHHHHhCCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEcC------------CEEEEcCCCCCC
Confidence            78999999998875    448999999999988 499999999998 568999977            999999999999


Q ss_pred             CCC
Q 027064          224 VTM  226 (229)
Q Consensus       224 i~~  226 (229)
                      +..
T Consensus        68 ~~~   70 (86)
T cd05191          68 VLE   70 (86)
T ss_pred             chH
Confidence            864

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.81  E-value=2e-09  Score=86.12  Aligned_cols=69  Identities=36%  Similarity=0.443  Sum_probs=55.5

Q ss_pred             HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCCCC--------------------CHHhhhccCcEEE
Q 027064          157 LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSHTT--------------------DPESIVREADIVI  215 (229)
Q Consensus       157 lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~t~--------------------~l~~~~~~aDivi  215 (229)
                      +.++...+++||+|+|||+|++ |+.++..|..+|++ |++++|+..                    ++.+.+.++|+||
T Consensus         2 la~~~~~~l~~~~vlviGaGg~-ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI   80 (135)
T PF01488_consen    2 LAKKKFGDLKGKRVLVIGAGGA-ARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVI   80 (135)
T ss_dssp             HHCTHHSTGTTSEEEEESSSHH-HHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEE
T ss_pred             hhHHhcCCcCCCEEEEECCHHH-HHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEE
Confidence            4455555899999999999996 99999999999996 999998521                    2335678999999


Q ss_pred             EecCCCCC-CCC
Q 027064          216 AAAGQAMM-VTM  226 (229)
Q Consensus       216 sA~g~p~~-i~~  226 (229)
                      +||+.++. ++.
T Consensus        81 ~aT~~~~~~i~~   92 (135)
T PF01488_consen   81 NATPSGMPIITE   92 (135)
T ss_dssp             E-SSTTSTSSTH
T ss_pred             EecCCCCcccCH
Confidence            99999976 343

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=98.80  E-value=4.5e-09  Score=87.20  Aligned_cols=71  Identities=28%  Similarity=0.435  Sum_probs=51.2

Q ss_pred             HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCCCCC
Q 027064          157 LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       157 lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~p~~  223 (229)
                      +++..+..+.||+++|+|.|. ||+.+|..|...||.|+|+....             ..+.+.++.||++|+|||..+.
T Consensus        13 i~r~t~~~l~Gk~vvV~GYG~-vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vtaTG~~~v   91 (162)
T PF00670_consen   13 IMRATNLMLAGKRVVVIGYGK-VGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTATGNKDV   91 (162)
T ss_dssp             HHHHH-S--TTSEEEEE--SH-HHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-SSSSSS
T ss_pred             HHhcCceeeCCCEEEEeCCCc-ccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEECCCCccc
Confidence            445568889999999999999 59999999999999999996532             2577889999999999999998


Q ss_pred             CCCCC
Q 027064          224 VTMGI  228 (229)
Q Consensus       224 i~~~~  228 (229)
                      |+.++
T Consensus        92 i~~e~   96 (162)
T PF00670_consen   92 ITGEH   96 (162)
T ss_dssp             B-HHH
T ss_pred             cCHHH
Confidence            87543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=98.70  E-value=2.9e-08  Score=93.50  Aligned_cols=79  Identities=18%  Similarity=0.253  Sum_probs=66.8

Q ss_pred             CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC------------------CHHhhhc
Q 027064          149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT------------------DPESIVR  209 (229)
Q Consensus       149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~------------------~l~~~~~  209 (229)
                      ..+.+.+++.++...++.||+|+|||+|++ |+.++..|..+|+ .+++++++-.                  ++.+.+.
T Consensus       163 Sv~~~Av~la~~~~~~l~~kkvlviGaG~~-a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~  241 (414)
T PRK13940        163 SVAFSAITLAKRQLDNISSKNVLIIGAGQT-GELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIK  241 (414)
T ss_pred             CHHHHHHHHHHHHhcCccCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhc
Confidence            456788999999877899999999999997 9999999999997 7999988521                  2346688


Q ss_pred             cCcEEEEecCCCCCC-CCCC
Q 027064          210 EADIVIAAAGQAMMV-TMGI  228 (229)
Q Consensus       210 ~aDivisA~g~p~~i-~~~~  228 (229)
                      +||+||+|||.|+++ +.++
T Consensus       242 ~aDiVI~aT~a~~~vi~~~~  261 (414)
T PRK13940        242 KADIIIAAVNVLEYIVTCKY  261 (414)
T ss_pred             cCCEEEECcCCCCeeECHHH
Confidence            999999999999995 6543

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.66  E-value=4e-08  Score=93.76  Aligned_cols=71  Identities=28%  Similarity=0.414  Sum_probs=60.6

Q ss_pred             HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-------------CCCHHhhhccCcEEEEecCCCCC
Q 027064          157 LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-------------TTDPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       157 lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-------------t~~l~~~~~~aDivisA~g~p~~  223 (229)
                      +++.++..+.||+|+|+|.|. +|+++|..|...|++|++|++.             ..++.+.++.||+||+++|.+++
T Consensus       244 ~~R~~~~~LaGKtVgVIG~G~-IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~i  322 (476)
T PTZ00075        244 IFRATDVMIAGKTVVVCGYGD-VGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKDI  322 (476)
T ss_pred             HHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCcccc
Confidence            445567899999999999999 5999999999999999999654             22567889999999999999999


Q ss_pred             CCCCC
Q 027064          224 VTMGI  228 (229)
Q Consensus       224 i~~~~  228 (229)
                      |+.++
T Consensus       323 I~~e~  327 (476)
T PTZ00075        323 ITLEH  327 (476)
T ss_pred             cCHHH
Confidence            87543

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=98.60  E-value=1.1e-07  Score=87.45  Aligned_cols=77  Identities=16%  Similarity=0.144  Sum_probs=61.4

Q ss_pred             CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-----CHH----hhhccCcEEEEe-
Q 027064          149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-----DPE----SIVREADIVIAA-  217 (229)
Q Consensus       149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-----~l~----~~~~~aDivisA-  217 (229)
                      ..+.+++++++.. .+++||+|+|||+|++ |+.++..|.++|+ .+++||++-.     ++.    ++..++||||+| 
T Consensus       157 Sv~s~av~~~~~~-~~l~~k~vLvIGaGem-~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVIs~t  234 (338)
T PRK00676        157 TIESVVQQELRRR-QKSKKASLLFIGYSEI-NRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVIFFGS  234 (338)
T ss_pred             CHHHHHHHHHHHh-CCccCCEEEEEcccHH-HHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEEEEcC
Confidence            3456678888776 5799999999999997 9999999999996 6999999731     222    456799999997 


Q ss_pred             --cCCCCCC-CCC
Q 027064          218 --AGQAMMV-TMG  227 (229)
Q Consensus       218 --~g~p~~i-~~~  227 (229)
                        |+.|+++ +.+
T Consensus       235 ~~Tas~~p~i~~~  247 (338)
T PRK00676        235 SESAYAFPHLSWE  247 (338)
T ss_pred             CcCCCCCceeeHH
Confidence              7888884 543

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.42  E-value=4.6e-07  Score=81.72  Aligned_cols=68  Identities=19%  Similarity=0.304  Sum_probs=57.9

Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------CHHhhhccCcEEE
Q 027064          152 KGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------DPESIVREADIVI  215 (229)
Q Consensus       152 ~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~l~~~~~~aDivi  215 (229)
                      .++...++++++++.|++|+|+|.|. +|++++..|.+.|++|++++++..                ++.+.++++|+||
T Consensus       137 gav~~a~~~~~~~l~g~kvlViG~G~-iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aDiVI  215 (296)
T PRK08306        137 GAIMMAIEHTPITIHGSNVLVLGFGR-TGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKIDIIF  215 (296)
T ss_pred             HHHHHHHHhCCCCCCCCEEEEECCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCCEEE
Confidence            34666788888899999999999999 599999999999999999988742                3457789999999


Q ss_pred             EecCC
Q 027064          216 AAAGQ  220 (229)
Q Consensus       216 sA~g~  220 (229)
                      ++++.
T Consensus       216 ~t~p~  220 (296)
T PRK08306        216 NTIPA  220 (296)
T ss_pred             ECCCh
Confidence            99863

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=98.38  E-value=8.9e-07  Score=77.01  Aligned_cols=78  Identities=27%  Similarity=0.390  Sum_probs=65.2

Q ss_pred             CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE---EEEEcCC----CC-------------------
Q 027064          149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT---VTIVHSH----TT-------------------  202 (229)
Q Consensus       149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at---Vtv~~~~----t~-------------------  202 (229)
                      .+..|++.-++..+.+++|++++|+|+|++ |+.++.+|...|++   +++++++    ..                   
T Consensus         7 v~lAG~~~al~~~g~~l~~~rvlvlGAGgA-g~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~   85 (226)
T cd05311           7 VTLAGLLNALKLVGKKIEEVKIVINGAGAA-GIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPE   85 (226)
T ss_pred             HHHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccC
Confidence            456788899999998999999999999997 99999999999986   9999987    11                   


Q ss_pred             ----CHHhhhccCcEEEEecCCCCCCCCCC
Q 027064          203 ----DPESIVREADIVIAAAGQAMMVTMGI  228 (229)
Q Consensus       203 ----~l~~~~~~aDivisA~g~p~~i~~~~  228 (229)
                          ++.+.++++|+||++|+ ++.+++++
T Consensus        86 ~~~~~l~~~l~~~dvlIgaT~-~G~~~~~~  114 (226)
T cd05311          86 KTGGTLKEALKGADVFIGVSR-PGVVKKEM  114 (226)
T ss_pred             cccCCHHHHHhcCCEEEeCCC-CCCCCHHH
Confidence                23355677899999999 88887654

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.34  E-value=6e-07  Score=84.92  Aligned_cols=78  Identities=28%  Similarity=0.316  Sum_probs=65.3

Q ss_pred             cCCHHHHHHHHHHh-CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcE
Q 027064          148 PCTPKGCLELLKRS-GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADI  213 (229)
Q Consensus       148 PcTa~av~~lL~~~-~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDi  213 (229)
                      -+|..+++.-+++. ++.+.||+|+|+|.|. +|+.++..|...|++|+++++..             .++.+.++.+|+
T Consensus       192 ~gt~~s~~~ai~rat~~~l~Gk~VlViG~G~-IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDV  270 (425)
T PRK05476        192 YGTGESLLDGIKRATNVLIAGKVVVVAGYGD-VGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDI  270 (425)
T ss_pred             HHHHhhhHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCE
Confidence            35788888876666 7788999999999999 59999999999999999997542             145677889999


Q ss_pred             EEEecCCCCCCCC
Q 027064          214 VIAAAGQAMMVTM  226 (229)
Q Consensus       214 visA~g~p~~i~~  226 (229)
                      ||++||.++.|..
T Consensus       271 VI~aTG~~~vI~~  283 (425)
T PRK05476        271 FVTATGNKDVITA  283 (425)
T ss_pred             EEECCCCHHHHHH
Confidence            9999999887753

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.31  E-value=1.3e-06  Score=78.65  Aligned_cols=72  Identities=24%  Similarity=0.322  Sum_probs=58.4

Q ss_pred             CCHHHHH-HHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------CHHhhhccC
Q 027064          149 CTPKGCL-ELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------DPESIVREA  211 (229)
Q Consensus       149 cTa~av~-~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~l~~~~~~a  211 (229)
                      +|+.+.+ ..++.+++++.||+|+|+|.|.+ |+.++..|...|++|++++++..                ++.+.++++
T Consensus       132 ~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~i-G~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~a  210 (287)
T TIGR02853       132 PTAEGAIMMAIEHTDFTIHGSNVMVLGFGRT-GMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEI  210 (287)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCEEEEEcChHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccC
Confidence            4555444 55677788999999999999995 99999999999999999987532                245678899


Q ss_pred             cEEEEecCCC
Q 027064          212 DIVIAAAGQA  221 (229)
Q Consensus       212 DivisA~g~p  221 (229)
                      |+||++++.+
T Consensus       211 DiVint~P~~  220 (287)
T TIGR02853       211 DIVINTIPAL  220 (287)
T ss_pred             CEEEECCChH
Confidence            9999998643

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PLN00203 glutamyl-tRNA reductase

Probab=98.22  E-value=2.1e-06  Score=83.14  Aligned_cols=80  Identities=15%  Similarity=0.182  Sum_probs=64.8

Q ss_pred             cCCHHHHHHHHHHhCC--CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------CH
Q 027064          148 PCTPKGCLELLKRSGV--TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------DP  204 (229)
Q Consensus       148 PcTa~av~~lL~~~~~--~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------~l  204 (229)
                      ...+.+++++.+....  ++.+++|+|||.|.+ |+.++..|..+|+ .|++++++-.                    ++
T Consensus       245 vSv~s~Av~la~~~~~~~~l~~kkVlVIGAG~m-G~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl  323 (519)
T PLN00203        245 VSVSSAAVELALMKLPESSHASARVLVIGAGKM-GKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEM  323 (519)
T ss_pred             cCHHHHHHHHHHHhcCCCCCCCCEEEEEeCHHH-HHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhH
Confidence            3456788899988754  489999999999996 9999999999998 6999987421                    23


Q ss_pred             HhhhccCcEEEEecCCCCC-CCCCC
Q 027064          205 ESIVREADIVIAAAGQAMM-VTMGI  228 (229)
Q Consensus       205 ~~~~~~aDivisA~g~p~~-i~~~~  228 (229)
                      .+.+..||+||+|||.|+. |+.+|
T Consensus       324 ~~al~~aDVVIsAT~s~~pvI~~e~  348 (519)
T PLN00203        324 LACAAEADVVFTSTSSETPLFLKEH  348 (519)
T ss_pred             HHHHhcCCEEEEccCCCCCeeCHHH
Confidence            4567899999999999998 46655

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.22  E-value=1.9e-06  Score=81.14  Aligned_cols=78  Identities=29%  Similarity=0.406  Sum_probs=61.9

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC-----------------CHHhhhccC
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT-----------------DPESIVREA  211 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~-----------------~l~~~~~~a  211 (229)
                      .+.+++++.++...++.|++|+|+|.|.+ |..++..|...| ..|+++++...                 ++.+.+..+
T Consensus       163 v~~~Av~la~~~~~~l~~~~VlViGaG~i-G~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~a  241 (417)
T TIGR01035       163 ISSAAVELAERIFGSLKGKKALLIGAGEM-GELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEA  241 (417)
T ss_pred             HHHHHHHHHHHHhCCccCCEEEEECChHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhC
Confidence            45666777776666789999999999996 999999999999 57999977421                 233557799


Q ss_pred             cEEEEecCCCCC-CCCCC
Q 027064          212 DIVIAAAGQAMM-VTMGI  228 (229)
Q Consensus       212 DivisA~g~p~~-i~~~~  228 (229)
                      |+||+|||.|+. ++.+|
T Consensus       242 DvVi~aT~s~~~ii~~e~  259 (417)
T TIGR01035       242 DIVISSTGAPHPIVSKED  259 (417)
T ss_pred             CEEEECCCCCCceEcHHH
Confidence            999999999987 46554

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.19  E-value=2.1e-06  Score=80.97  Aligned_cols=79  Identities=24%  Similarity=0.380  Sum_probs=60.9

Q ss_pred             CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-----------------CHHhhhcc
Q 027064          149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-----------------DPESIVRE  210 (229)
Q Consensus       149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-----------------~l~~~~~~  210 (229)
                      +.+.+.+++.+....++.|++|+|+|.|.+ |+.++.+|...|+ .|+++++...                 ++.+.+..
T Consensus       164 Sv~~~Av~~a~~~~~~~~~~~vlViGaG~i-G~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~  242 (423)
T PRK00045        164 SVASAAVELAKQIFGDLSGKKVLVIGAGEM-GELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAE  242 (423)
T ss_pred             CHHHHHHHHHHHhhCCccCCEEEEECchHH-HHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhcc
Confidence            344555676665544689999999999996 9999999999998 7999987421                 12345788


Q ss_pred             CcEEEEecCCCCC-CCCCC
Q 027064          211 ADIVIAAAGQAMM-VTMGI  228 (229)
Q Consensus       211 aDivisA~g~p~~-i~~~~  228 (229)
                      +|+||+|||.|+. ++.+|
T Consensus       243 aDvVI~aT~s~~~~i~~~~  261 (423)
T PRK00045        243 ADIVISSTGAPHPIIGKGM  261 (423)
T ss_pred             CCEEEECCCCCCcEEcHHH
Confidence            9999999999987 46554

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.15  E-value=3e-06  Score=79.82  Aligned_cols=77  Identities=22%  Similarity=0.306  Sum_probs=61.4

Q ss_pred             CCHHHHHH-HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEE
Q 027064          149 CTPKGCLE-LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIV  214 (229)
Q Consensus       149 cTa~av~~-lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDiv  214 (229)
                      +|...+++ +++..++.+.||+|+|+|.|.+ |+.+++.|...|+.|++++...             .++.+.++.+|+|
T Consensus       176 g~g~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVV  254 (406)
T TIGR00936       176 GTGQSTIDGILRATNLLIAGKTVVVAGYGWC-GKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIF  254 (406)
T ss_pred             ccchhHHHHHHHhcCCCCCcCEEEEECCCHH-HHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEE
Confidence            45555555 4444577899999999999995 9999999999999999985432             1356778899999


Q ss_pred             EEecCCCCCCCC
Q 027064          215 IAAAGQAMMVTM  226 (229)
Q Consensus       215 isA~g~p~~i~~  226 (229)
                      |+++|.++.|+.
T Consensus       255 ItaTG~~~vI~~  266 (406)
T TIGR00936       255 ITATGNKDVIRG  266 (406)
T ss_pred             EECCCCHHHHHH
Confidence            999999987753

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]

Probab=98.10  E-value=6.1e-06  Score=76.24  Aligned_cols=80  Identities=21%  Similarity=0.261  Sum_probs=64.1

Q ss_pred             cCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C------------CHHhhhccCcEE
Q 027064          148 PCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T------------DPESIVREADIV  214 (229)
Q Consensus       148 PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~------------~l~~~~~~aDiv  214 (229)
                      =|--..+=-+++.+++-+.||+|||.|.|. |||..|+.|...||.|+|+.-.- +            .+.+..+.+||+
T Consensus       190 GtgqS~~DgI~RaTn~liaGK~vVV~GYG~-vGrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDif  268 (420)
T COG0499         190 GTGQSLLDGILRATNVLLAGKNVVVAGYGW-VGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIF  268 (420)
T ss_pred             ccchhHHHHHHhhhceeecCceEEEecccc-cchHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEE
Confidence            343344445556688889999999999999 69999999999999999885431 1            355778999999


Q ss_pred             EEecCCCCCCCCCC
Q 027064          215 IAAAGQAMMVTMGI  228 (229)
Q Consensus       215 isA~g~p~~i~~~~  228 (229)
                      |++||.-+.|+.|+
T Consensus       269 iT~TGnkdVi~~eh  282 (420)
T COG0499         269 VTATGNKDVIRKEH  282 (420)
T ss_pred             EEccCCcCccCHHH
Confidence            99999999987654

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=98.06  E-value=1.3e-05  Score=75.76  Aligned_cols=78  Identities=26%  Similarity=0.353  Sum_probs=62.4

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcE
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADI  213 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDi  213 (229)
                      +-|--..+-.+++..++.+.|++|+|+|.|.+ |+.++..+...||+|+++....             .++.+.++.+|+
T Consensus       182 ~g~g~s~~~~i~r~t~~~l~GktVvViG~G~I-G~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDV  260 (413)
T cd00401         182 YGCRESLIDGIKRATDVMIAGKVAVVAGYGDV-GKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDI  260 (413)
T ss_pred             chhchhhHHHHHHhcCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCE
Confidence            34544455556666788899999999999995 9999999999999999986532             135567889999


Q ss_pred             EEEecCCCCCCC
Q 027064          214 VIAAAGQAMMVT  225 (229)
Q Consensus       214 visA~g~p~~i~  225 (229)
                      ||.|+|.++.+.
T Consensus       261 VI~atG~~~~i~  272 (413)
T cd00401         261 FVTTTGNKDIIT  272 (413)
T ss_pred             EEECCCCHHHHH
Confidence            999999988764

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=98.02  E-value=2.8e-05  Score=62.28  Aligned_cols=73  Identities=26%  Similarity=0.457  Sum_probs=59.3

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC-------------------CHHhhhc
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT-------------------DPESIVR  209 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~-------------------~l~~~~~  209 (229)
                      +..|+.+-+++.++++++++++|+|.|.+ |+.++..|.+.| ..|+++++...                   +..+.+.
T Consensus         2 d~~g~~~a~~~~~~~~~~~~i~iiG~G~~-g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (155)
T cd01065           2 DGLGFVRALEEAGIELKGKKVLILGAGGA-ARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLA   80 (155)
T ss_pred             CHHHHHHHHHhhCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccc
Confidence            45789999999998899999999999885 999999999886 68999876421                   2223467


Q ss_pred             cCcEEEEecCCCCC
Q 027064          210 EADIVIAAAGQAMM  223 (229)
Q Consensus       210 ~aDivisA~g~p~~  223 (229)
                      ++|+||++++.+..
T Consensus        81 ~~Dvvi~~~~~~~~   94 (155)
T cd01065          81 EADLIINTTPVGMK   94 (155)
T ss_pred             cCCEEEeCcCCCCC
Confidence            89999999987654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.00  E-value=1.6e-05  Score=72.10  Aligned_cols=74  Identities=24%  Similarity=0.372  Sum_probs=58.1

Q ss_pred             CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-----------------CHHhhhcc
Q 027064          149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-----------------DPESIVRE  210 (229)
Q Consensus       149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-----------------~l~~~~~~  210 (229)
                      +.+...+++.+....++.|++|+|||.|.+ |+.++.+|...|+ .|+++++...                 ++.+.+.+
T Consensus       160 sv~~~Av~~a~~~~~~l~~~~V~ViGaG~i-G~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~  238 (311)
T cd05213         160 SISSAAVELAEKIFGNLKGKKVLVIGAGEM-GELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNE  238 (311)
T ss_pred             CHHHHHHHHHHHHhCCccCCEEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhc
Confidence            344555777776655689999999999996 9999999998775 7898987421                 23455788


Q ss_pred             CcEEEEecCCCCC
Q 027064          211 ADIVIAAAGQAMM  223 (229)
Q Consensus       211 aDivisA~g~p~~  223 (229)
                      +|+||+|||.|+.
T Consensus       239 aDvVi~at~~~~~  251 (311)
T cd05213         239 ADVVISATGAPHY  251 (311)
T ss_pred             CCEEEECCCCCch
Confidence            9999999999876

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.98  E-value=1.6e-05  Score=66.72  Aligned_cols=76  Identities=28%  Similarity=0.403  Sum_probs=58.0

Q ss_pred             cCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------
Q 027064          148 PCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------  202 (229)
Q Consensus       148 PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------  202 (229)
                      ..|+.+.++++++    .+.+++|++++|+|.++.+|+.++..|.+.|+.|+++.++-.                     
T Consensus         5 ~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~   84 (194)
T cd01078           5 NTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVE   84 (194)
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEee
Confidence            3466666666655    456899999999997555799999999999999999876411                     


Q ss_pred             -----CHHhhhccCcEEEEecCCCCC
Q 027064          203 -----DPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       203 -----~l~~~~~~aDivisA~g~p~~  223 (229)
                           ++.+.++++|+||+||+.+.+
T Consensus        85 ~~~~~~~~~~~~~~diVi~at~~g~~  110 (194)
T cd01078          85 TSDDAARAAAIKGADVVFAAGAAGVE  110 (194)
T ss_pred             CCCHHHHHHHHhcCCEEEECCCCCce
Confidence                 112557789999999988773

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN02494 adenosylhomocysteinase

Probab=97.97  E-value=1.2e-05  Score=77.05  Aligned_cols=75  Identities=25%  Similarity=0.371  Sum_probs=59.2

Q ss_pred             CHHHHHHHH-HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEE
Q 027064          150 TPKGCLELL-KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVI  215 (229)
Q Consensus       150 Ta~av~~lL-~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivi  215 (229)
                      |-+++++-+ +..++.+.||+|+|+|.|.+ |+.+|..+...|++|++++....             ++.+.++.||+||
T Consensus       236 tgqS~~d~i~r~t~i~LaGKtVvViGyG~I-Gr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI  314 (477)
T PLN02494        236 CRHSLPDGLMRATDVMIAGKVAVICGYGDV-GKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFV  314 (477)
T ss_pred             ccccHHHHHHHhcCCccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEE
Confidence            334444433 34477789999999999995 99999999999999999855321             3567788999999


Q ss_pred             EecCCCCCCC
Q 027064          216 AAAGQAMMVT  225 (229)
Q Consensus       216 sA~g~p~~i~  225 (229)
                      +++|.+++|.
T Consensus       315 ~tTGt~~vI~  324 (477)
T PLN02494        315 TTTGNKDIIM  324 (477)
T ss_pred             ECCCCccchH
Confidence            9999998874

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.94  E-value=2.9e-05  Score=66.23  Aligned_cols=71  Identities=24%  Similarity=0.308  Sum_probs=54.1

Q ss_pred             cCCHHHHHHHHHHh------CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH--------------hh
Q 027064          148 PCTPKGCLELLKRS------GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE--------------SI  207 (229)
Q Consensus       148 PcTa~av~~lL~~~------~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~--------------~~  207 (229)
                      |.|++|+...++..      +.+++||++.|+|.|. +|+.++..|.+.|++|+++++....+.              +.
T Consensus         3 ~aTg~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~-vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l   81 (200)
T cd01075           3 PPTAYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGK-VGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEI   81 (200)
T ss_pred             ChhHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhh
Confidence            67888886665543      6789999999999998 599999999999999998876532111              12


Q ss_pred             h-ccCcEEEEecC
Q 027064          208 V-READIVIAAAG  219 (229)
Q Consensus       208 ~-~~aDivisA~g  219 (229)
                      . .++|+++.++.
T Consensus        82 ~~~~~Dv~vp~A~   94 (200)
T cd01075          82 YSVDADVFAPCAL   94 (200)
T ss_pred             ccccCCEEEeccc
Confidence            2 36899986554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12862 malic enzyme; Reviewed

Probab=97.89  E-value=6.4e-05  Score=75.94  Aligned_cols=157  Identities=20%  Similarity=0.217  Sum_probs=117.7

Q ss_pred             HHHHHHHHHHHc-CCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccch
Q 027064           56 YVSMKRKACAEV-GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNI  134 (229)
Q Consensus        56 Y~~~k~k~a~~~-Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~  134 (229)
                      =...|.-.+..+ ||++..+.++.. +.+||++.++.+-  |+.-||.+.  --+.-+--++.+.....-|+.-||.   
T Consensus        96 v~egK~~l~~~~~gi~~~~i~~~~~-d~d~~v~~v~~~~--p~f~~i~~E--D~~~~~~f~i~~~~~~~~~ip~f~D---  167 (763)
T PRK12862         96 VMEGKAVLFKKFAGIDVFDIELDES-DPDKLVEIVAALE--PTFGGINLE--DIKAPECFYIERELRERMKIPVFHD---  167 (763)
T ss_pred             hHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCcceeeee--cccCchHHHHHHHHHhcCCCceEec---
Confidence            345666666665 588777777754 7799999999997  667776653  1122223345555444445665653   


Q ss_pred             hhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC----------
Q 027064          135 GKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT----------  201 (229)
Q Consensus       135 g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t----------  201 (229)
                             ++.+-.-.+..|++.-++-.+.+++.-++++.|+|.. |-.++.+|...|.   .+++|+++-          
T Consensus       168 -------D~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~l  239 (763)
T PRK12862        168 -------DQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAA-ALACLDLLVSLGVKRENIWVTDIKGVVYEGRTELM  239 (763)
T ss_pred             -------CcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHH-HHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCccc
Confidence                   2445556778899999999999999999999999998 9999999999998   689998631          


Q ss_pred             -------------CCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          202 -------------TDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 -------------~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                                   .+|.+.++.+|++|-.++ |+.+++|||
T Consensus       240 ~~~~~~~a~~~~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v  279 (763)
T PRK12862        240 DPWKARYAQKTDARTLAEVIEGADVFLGLSA-AGVLKPEMV  279 (763)
T ss_pred             cHHHHHHhhhcccCCHHHHHcCCCEEEEcCC-CCCCCHHHH
Confidence                         146788999999999998 999999885

>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed

Probab=97.85  E-value=8.8e-05  Score=74.72  Aligned_cols=158  Identities=20%  Similarity=0.235  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHHcC-CeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccc
Q 027064           55 SYVSMKRKACAEVG-IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLN  133 (229)
Q Consensus        55 ~Y~~~k~k~a~~~G-i~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N  133 (229)
                      --...|.-.+..+| |++..+.++.. +.+||++.++.+-  |+.-||.+.=  -+.-+--++.+....+-|+.-||.  
T Consensus        87 pv~egK~~l~~~~~gid~~~i~~~~~-d~de~v~~v~~~~--p~~g~i~~ED--~~~p~~f~i~~~~~~~~~ip~f~D--  159 (752)
T PRK07232         87 PVMEGKGVLFKKFAGIDVFDIEVDEE-DPDKFIEAVAALE--PTFGGINLED--IKAPECFYIEEKLRERMDIPVFHD--  159 (752)
T ss_pred             cHHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCccEEeeee--cCCchHHHHHHHHHHhcCCCeecc--
Confidence            34456777777664 88777777654 6899999999886  6677777641  122222344444444445555653  


Q ss_pred             hhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC---------
Q 027064          134 IGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT---------  201 (229)
Q Consensus       134 ~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t---------  201 (229)
                              ++.+-.-.+..|++.-|+-.+.+++.-++++.|+|.. |-.++.+|...|.   .+++|+++-         
T Consensus       160 --------D~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~  230 (752)
T PRK07232        160 --------DQHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAA-AIACLNLLVALGAKKENIIVCDSKGVIYKGRTEG  230 (752)
T ss_pred             --------ccchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHH-HHHHHHHHHHcCCCcccEEEEcCCCeecCCCccc
Confidence                    2444446677899999999999999999999999998 9999999999988   689997741         


Q ss_pred             --------------CCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          202 --------------TDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 --------------~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                                    .+|.+.++.+|++|-.++ |+.+++|||
T Consensus       231 ~~~~k~~~a~~~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v  271 (752)
T PRK07232        231 MDEWKAAYAVDTDARTLAEAIEGADVFLGLSA-AGVLTPEMV  271 (752)
T ss_pred             ccHHHHHHhccCCCCCHHHHHcCCCEEEEcCC-CCCCCHHHH
Confidence                          147788999999998888 999999875

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.83  E-value=3.4e-05  Score=65.98  Aligned_cols=59  Identities=25%  Similarity=0.367  Sum_probs=47.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-CCH-----------------HhhhccCcEEEEecCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-TDP-----------------ESIVREADIVIAAAGQAM  222 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~~l-----------------~~~~~~aDivisA~g~p~  222 (229)
                      ++++||+|+|||.|.+ |.-.+..|+..|+.|+++...- +.+                 ...+..+|+||+||+.|.
T Consensus         6 l~l~~k~vLVIGgG~v-a~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~e   82 (202)
T PRK06718          6 IDLSNKRVVIVGGGKV-AGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPR   82 (202)
T ss_pred             EEcCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHH
Confidence            4689999999999995 9999999999999999986532 111                 234778999999999774

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.78  E-value=4e-05  Score=63.11  Aligned_cols=59  Identities=20%  Similarity=0.314  Sum_probs=47.0

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CCCHH--------------hhhccCcEEEEecCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TTDPE--------------SIVREADIVIAAAGQAM  222 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~~l~--------------~~~~~aDivisA~g~p~  222 (229)
                      ++++|++|+|||.|. ||.-.+..|+..||.|+++... +.++.              ..+..+|+||.||+.+.
T Consensus         9 l~l~~~~vlVvGGG~-va~rka~~Ll~~ga~V~VIsp~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e   82 (157)
T PRK06719          9 FNLHNKVVVIIGGGK-IAYRKASGLKDTGAFVTVVSPEICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHA   82 (157)
T ss_pred             EEcCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEcCccCHHHHhccCcEEEecccChhcCCCceEEEECCCCHH
Confidence            578999999999999 5999999999999999998432 22221              23778999999998653

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.69  E-value=9.4e-05  Score=61.65  Aligned_cols=59  Identities=22%  Similarity=0.254  Sum_probs=48.1

Q ss_pred             HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecC
Q 027064          160 RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       160 ~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g  219 (229)
                      ..+.++.||+|.|||.|.+ |+.+|.+|..-|++|+.+++...             ++.+.+++||+|+...+
T Consensus        29 ~~~~~l~g~tvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~p  100 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGYGRI-GRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLP  100 (178)
T ss_dssp             TTBS-STTSEEEEESTSHH-HHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SS
T ss_pred             CCccccCCCEEEEEEEcCC-cCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhc
Confidence            3456899999999999996 99999999999999999987542             57788999999999877

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=97.69  E-value=5.4e-05  Score=57.78  Aligned_cols=59  Identities=34%  Similarity=0.473  Sum_probs=44.5

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-----------CCHHhhhccCcEEEEecCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-----------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-----------~~l~~~~~~aDivisA~g~p~  222 (229)
                      .+++||+|+|||.|.+ |..-+..|++.||+|+++....           +...+.+..+|+||.|++.|.
T Consensus         3 l~l~~~~vlVvGgG~v-a~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~   72 (103)
T PF13241_consen    3 LDLKGKRVLVVGGGPV-AARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPE   72 (103)
T ss_dssp             E--TT-EEEEEEESHH-HHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HH
T ss_pred             EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHH
Confidence            4689999999999995 9999999999999999986652           233466888999999998653

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.67  E-value=0.00011  Score=67.79  Aligned_cols=71  Identities=23%  Similarity=0.233  Sum_probs=55.3

Q ss_pred             HHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhC-CC-EEEEEcCCCC---------------CHHhhhccCcEEE
Q 027064          153 GCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA-DA-TVTIVHSHTT---------------DPESIVREADIVI  215 (229)
Q Consensus       153 av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~-~a-tVtv~~~~t~---------------~l~~~~~~aDivi  215 (229)
                      ++..-.+..+.+++||+|+|+|+++.+|..++..|.++ |+ .++++++...               ++.+.+.++|+||
T Consensus       141 ~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv  220 (340)
T PRK14982        141 QVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVV  220 (340)
T ss_pred             HHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEE
Confidence            44444555677899999999999777899999999864 54 8889987432               2225678899999


Q ss_pred             EecCCCCC
Q 027064          216 AAAGQAMM  223 (229)
Q Consensus       216 sA~g~p~~  223 (229)
                      ++++.|+.
T Consensus       221 ~~ts~~~~  228 (340)
T PRK14982        221 WVASMPKG  228 (340)
T ss_pred             ECCcCCcC
Confidence            99999877

>PRK12861 malic enzyme; Reviewed

Probab=97.62  E-value=0.00018  Score=72.58  Aligned_cols=157  Identities=18%  Similarity=0.191  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHc-CCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccch
Q 027064           56 YVSMKRKACAEV-GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNI  134 (229)
Q Consensus        56 Y~~~k~k~a~~~-Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~  134 (229)
                      =...|.-.+..+ ||++..+.++. .+.+||++.++.+..-  .-||.+.  --+.-+--++.+....+=|+.-||.-  
T Consensus        92 vmeGK~~L~~~~agid~~di~~~~-~dpd~~v~~v~a~~~~--fg~i~lE--D~~~p~~f~il~~~~~~~~ipvf~DD--  164 (764)
T PRK12861         92 VMEGKAVLFKKFAGIDVFDIEINE-TDPDKLVDIIAGLEPT--FGGINLE--DIKAPECFTVERKLRERMKIPVFHDD--  164 (764)
T ss_pred             hHHHHHHHHhhccCCCccccccCC-CCHHHHHHHHHHHHhh--cCCceee--eccCchHHHHHHHHHhcCCCCeeccc--
Confidence            345676666665 58877777765 5678999999888644  5664432  21222223344433322255556632  


Q ss_pred             hhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC----------
Q 027064          135 GKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT----------  201 (229)
Q Consensus       135 g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t----------  201 (229)
                              ..+-.-.+..|++.-|+-.+.+++.-++++.|+|.. |-.++.+|...|.   .+++|+++-          
T Consensus       165 --------~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaA-g~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r~~~l  235 (764)
T PRK12861        165 --------QHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAA-ALACLDLLVDLGLPVENIWVTDIEGVVYRGRTTLM  235 (764)
T ss_pred             --------cchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHH-HHHHHHHHHHcCCChhhEEEEcCCCeeeCCCcccC
Confidence                    344445677899999999999999999999999998 9999999999998   589998631          


Q ss_pred             -------------CCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          202 -------------TDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 -------------~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                                   .+|.+.++.+|++|-.++ |+.+++|||
T Consensus       236 ~~~k~~~a~~~~~~~L~eai~~advliG~S~-~g~ft~e~v  275 (764)
T PRK12861        236 DPDKERFAQETDARTLAEVIGGADVFLGLSA-GGVLKAEML  275 (764)
T ss_pred             CHHHHHHHhhcCCCCHHHHHhcCCEEEEcCC-CCCCCHHHH
Confidence                         146788999999998887 999999875

>COG0281 SfcA Malic enzyme [Energy production and conversion]

Probab=97.60  E-value=0.00027  Score=66.52  Aligned_cols=159  Identities=21%  Similarity=0.291  Sum_probs=118.1

Q ss_pred             cHHHHHHHHHHHHHc-CCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCC-CCCCCCHHHHHhcCCccCcccccC
Q 027064           53 SQSYVSMKRKACAEV-GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLP-LPKHINEEKVLGEISLEKDVDGFH  130 (229)
Q Consensus        53 s~~Y~~~k~k~a~~~-Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~P-lp~~i~~~~i~~~I~p~KDVDg~~  130 (229)
                      +.-=...|.-.++++ ||++..+.++.. +.+++.+.++.+.  |..-||+++-= .|+-   .++...+.-+.|+.-||
T Consensus        99 g~pVmeGKa~Lfk~faGid~~pI~ld~~-~~~ei~~~Vkal~--p~FgginLedi~ap~c---f~ie~~lr~~~~IPvFh  172 (432)
T COG0281          99 GKPVMEGKAVLFKAFAGIDVLPIELDVG-TNNEIIEFVKALE--PTFGGINLEDIDAPRC---FAIEERLRYRMNIPVFH  172 (432)
T ss_pred             CcchhhhHHHHHHHhcCCCceeeEeeCC-ChHHHHHHHHHhh--hcCCCcceeecccchh---hHHHHHHhhcCCCCccc
Confidence            333445676666654 788888888865 5578999999996  55899998742 2221   23444455577888777


Q ss_pred             ccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC---C--
Q 027064          131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT---T--  202 (229)
Q Consensus       131 ~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t---~--  202 (229)
                      .--          .+-.--|..|++.-|+-.|.+++..++++.|+|.. |-.++.+|.+.|.   .+++|+|+-   .  
T Consensus       173 DDq----------qGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAA-giaia~~l~~~g~~~~~i~~~D~~G~l~~~r  241 (432)
T COG0281         173 DDQ----------QGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAA-GIAIADLLVAAGVKEENIFVVDRKGLLYDGR  241 (432)
T ss_pred             ccc----------cHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHH-HHHHHHHHHHhCCCcccEEEEecCCcccCCC
Confidence            433          33334467899999999999999999999999998 9999999999988   599998852   1  


Q ss_pred             -CH-------------------HhhhccCcEEEEecCCCCCCCCCCC
Q 027064          203 -DP-------------------ESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       203 -~l-------------------~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                       ++                   .+.+..||++|..+|. +.+++|||
T Consensus       242 ~~~~~~~~k~~~a~~~~~~~~~~~~~~~adv~iG~S~~-G~~t~e~V  287 (432)
T COG0281         242 EDLTMNQKKYAKAIEDTGERTLDLALAGADVLIGVSGV-GAFTEEMV  287 (432)
T ss_pred             cccccchHHHHHHHhhhccccccccccCCCEEEEcCCC-CCcCHHHH
Confidence             10                   2245679999999988 99999885

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.59  E-value=7.1e-05  Score=69.62  Aligned_cols=63  Identities=24%  Similarity=0.320  Sum_probs=49.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------------CCHHhhhccCcEEEEecC---C
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------------TDPESIVREADIVIAAAG---Q  220 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------------~~l~~~~~~aDivisA~g---~  220 (229)
                      +.+++|+|+|.|. +|+.++..|...|++|+++++..                     .++.+.+++||+||++++   .
T Consensus       165 l~~~~VlViGaG~-vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       165 VEPGDVTIIGGGV-VGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA  243 (370)
T ss_pred             CCCceEEEEcCCH-HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence            5678999999998 59999999999999999997631                     124566789999999984   3


Q ss_pred             --CCCCCCCC
Q 027064          221 --AMMVTMGI  228 (229)
Q Consensus       221 --p~~i~~~~  228 (229)
                        |.+|+.++
T Consensus       244 ~~p~lit~~~  253 (370)
T TIGR00518       244 KAPKLVSNSL  253 (370)
T ss_pred             CCCcCcCHHH
Confidence              56666544

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=97.55  E-value=0.00031  Score=65.71  Aligned_cols=64  Identities=22%  Similarity=0.330  Sum_probs=53.8

Q ss_pred             HHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecC
Q 027064          155 LELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       155 ~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g  219 (229)
                      +.+.++.+.++.||++.|||.|.+ |+.+|..|..-|++|..|+...         .++.+.+++||||+..++
T Consensus       104 L~l~r~~g~~L~gktvGIIG~G~I-G~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~P  176 (378)
T PRK15438        104 LMLAERDGFSLHDRTVGIVGVGNV-GRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTP  176 (378)
T ss_pred             HHHhccCCCCcCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCC
Confidence            444556678899999999999995 9999999999999999997421         257889999999998776

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.54  E-value=0.00015  Score=62.27  Aligned_cols=58  Identities=31%  Similarity=0.479  Sum_probs=47.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-CCH-----------------HhhhccCcEEEEecCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-TDP-----------------ESIVREADIVIAAAGQA  221 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~~l-----------------~~~~~~aDivisA~g~p  221 (229)
                      ++++||+|+|||.|. ||.--+..|++.||.|+++.... +.+                 .+.+..+|+||.|||.+
T Consensus         5 l~l~gk~vlVvGgG~-va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~   80 (205)
T TIGR01470         5 ANLEGRAVLVVGGGD-VALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDE   80 (205)
T ss_pred             EEcCCCeEEEECcCH-HHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCH
Confidence            468999999999999 59999999999999999986542 211                 13467899999999976

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN02928 oxidoreductase family protein

Probab=97.49  E-value=0.00031  Score=64.82  Aligned_cols=56  Identities=23%  Similarity=0.271  Sum_probs=48.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEe
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA  217 (229)
                      .++.||++.|||.|.+ |+.+|.+|...|++|+.+++..                         .++.+.+++||+|+.+
T Consensus       155 ~~l~gktvGIiG~G~I-G~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~  233 (347)
T PLN02928        155 DTLFGKTVFILGYGAI-GIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC  233 (347)
T ss_pred             cCCCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence            4789999999999996 9999999999999999987531                         1567889999999999


Q ss_pred             cC
Q 027064          218 AG  219 (229)
Q Consensus       218 ~g  219 (229)
                      ++
T Consensus       234 lP  235 (347)
T PLN02928        234 CT  235 (347)
T ss_pred             CC
Confidence            76

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=97.49  E-value=0.00041  Score=64.99  Aligned_cols=64  Identities=23%  Similarity=0.311  Sum_probs=53.8

Q ss_pred             HHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecC
Q 027064          155 LELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       155 ~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g  219 (229)
                      +.+.++.+.++.||+|.|||.|.+ |+.++..|...|++|..++...         .++.+.+++||+|+..++
T Consensus       104 L~l~r~~g~~l~gktvGIIG~G~I-G~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~P  176 (381)
T PRK00257        104 LTLAEREGVDLAERTYGVVGAGHV-GGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTP  176 (381)
T ss_pred             HHHhcccCCCcCcCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCc
Confidence            344456678899999999999995 9999999999999999997521         257788999999998877

>PRK13243 glyoxylate reductase; Reviewed

Probab=97.44  E-value=0.00041  Score=63.60  Aligned_cols=57  Identities=19%  Similarity=0.198  Sum_probs=49.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------CCHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------~~l~~~~~~aDivisA~g~  220 (229)
                      .++.||++.|||.|.+ |+.+|.+|...|++|..+++..            .++.+.+++||+|+.+++-
T Consensus       146 ~~L~gktvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~  214 (333)
T PRK13243        146 YDVYGKTIGIIGFGRI-GQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPL  214 (333)
T ss_pred             cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCC
Confidence            4689999999999996 9999999999999999887632            1467889999999999874

>PRK14804 ornithine carbamoyltransferase; Provisional

Probab=97.35  E-value=0.037  Score=50.53  Aligned_cols=148  Identities=17%  Similarity=0.136  Sum_probs=101.7

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCC-CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccC
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ-VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH  130 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~-~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~  130 (229)
                      .|..---+=..++.++|-.+..+.-..+ ...+.+.+..+-|+.  -+|+|.+-.|  .+-....+.+..       .+-
T Consensus        53 pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~~~~~~~dt~~vls~--~~D~iv~R~~--~~~~~~~~a~~~-------~vP  121 (311)
T PRK14804         53 TSTRTRVSFEVAMTEMGGHGIYLDWMASNFQLSDIDLEARYLSR--NVSVIMARLK--KHEDLLVMKNGS-------QVP  121 (311)
T ss_pred             CchhHHHHHHHHHHHcCCeEEEeCCCccccccccHHHHHHHHHh--cCCEEEEeCC--ChHHHHHHHHHC-------CCC
Confidence            5666666778899999999988865322 222334444666665  4899999866  333333333221       233


Q ss_pred             ccchhhhhccCCCCCcccCCHHHHHHHHHHhCC--CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------
Q 027064          131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGV--TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------  201 (229)
Q Consensus       131 ~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~--~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------  201 (229)
                      -+|.|     +  ....||=+.+=+--+++...  +++|++|++||.+.-|.+.++.+|..-|+.|++|.-.+       
T Consensus       122 VINag-----~--~~~HPtQaL~Dl~Ti~e~~g~~~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~  194 (311)
T PRK14804        122 VINGC-----D--NMFHPCQSLADIMTIALDSPEIPLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIAAKENIHA  194 (311)
T ss_pred             EEECC-----C--CCCChHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCCccHHHHH
Confidence            45543     1  24779988887666655433  68999999999988889999999999999999886432       


Q ss_pred             ---------------CCHHhhhccCcEEEEe
Q 027064          202 ---------------TDPESIVREADIVIAA  217 (229)
Q Consensus       202 ---------------~~l~~~~~~aDivisA  217 (229)
                                     .++.+.++.||+|.+-
T Consensus       195 ~~~~~~~~~g~i~~~~d~~~av~~aDvvy~d  225 (311)
T PRK14804        195 QTVERAKKKGTLSWEMNLHKAVSHADYVYTD  225 (311)
T ss_pred             HHHHHHHhcCCeEEEeCHHHHhCCCCEEEee
Confidence                           3556778899999873

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=97.28  E-value=0.00073  Score=61.97  Aligned_cols=58  Identities=17%  Similarity=0.279  Sum_probs=49.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------CCHHhhhccCcEEEEecCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------~~l~~~~~~aDivisA~g~p  221 (229)
                      ..+.|+++.|||.|.+ |+++|.+|...|++|+.+++..          .++.+.+++||+|+.+++..
T Consensus       142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t  209 (330)
T PRK12480        142 KPVKNMTVAIIGTGRI-GAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPAN  209 (330)
T ss_pred             cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCc
Confidence            3689999999999996 9999999999999999887532          26778899999999998744

>PRK06436 glycerate dehydrogenase; Provisional

Probab=97.25  E-value=0.00085  Score=60.93  Aligned_cols=57  Identities=21%  Similarity=0.293  Sum_probs=49.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g~  220 (229)
                      ..+.||++.|||-|.+ |+++|.+|...|++|..+++..         .++.+.+++||+|+...+-
T Consensus       118 ~~L~gktvgIiG~G~I-G~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~  183 (303)
T PRK06436        118 KLLYNKSLGILGYGGI-GRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPL  183 (303)
T ss_pred             CCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCC
Confidence            4789999999999996 9999999998999999987631         2578889999999998773

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.24  E-value=0.00083  Score=60.55  Aligned_cols=55  Identities=15%  Similarity=0.247  Sum_probs=48.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CCCHHhhhccCcEEEEecCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TTDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~~l~~~~~~aDivisA~g~p  221 (229)
                      .+++|.|||.|.+ |.+++..|.+.|.+|++.++. +.++.+.+++||+||.++..+
T Consensus         3 ~~m~I~iiG~G~~-G~~lA~~l~~~G~~V~~~~r~~~~~~~~~~~~advvi~~vp~~   58 (308)
T PRK14619          3 QPKTIAILGAGAW-GSTLAGLASANGHRVRVWSRRSGLSLAAVLADADVIVSAVSMK   58 (308)
T ss_pred             CCCEEEEECccHH-HHHHHHHHHHCCCEEEEEeCCCCCCHHHHHhcCCEEEEECChH
Confidence            5689999999996 999999999999999999876 467888899999999998754

>PRK04284 ornithine carbamoyltransferase; Provisional

Probab=97.19  E-value=0.031  Score=51.53  Aligned_cols=146  Identities=15%  Similarity=0.006  Sum_probs=101.5

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCCCC----HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQVS----EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD  127 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~----~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVD  127 (229)
                      +|..---+=..++.++|..+..+  +...+    -|.+.+.++-|+.-  +|+|.+-.|  .+-...++.+..    .  
T Consensus        55 pSTRTR~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iviR~~--~~~~~~~~a~~s----~--  122 (332)
T PRK04284         55 DSTRTRCAFEVAAYDQGAHVTYL--GPTGSQMGKKESTKDTARVLGGM--YDGIEYRGF--SQRTVETLAEYS----G--  122 (332)
T ss_pred             CChhHHHHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEecC--chHHHHHHHHhC----C--
Confidence            45555567778899999998865  33322    26677777777665  889999765  332233333322    1  


Q ss_pred             ccCccchhhhhccCCCCCcccCCHHHHHHHHHHh-CCCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCCC----
Q 027064          128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS-GVTIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSHT----  201 (229)
Q Consensus       128 g~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~-~~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~t----  201 (229)
                       +--+|.|       .....||=+.+=+--+.+. ..+++|++|++||-+ .-|.+.++.+|...|++|++|+-.+    
T Consensus       123 -vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~  194 (332)
T PRK04284        123 -VPVWNGL-------TDEDHPTQVLADFLTAKEHLKKPYKDIKFTYVGDGRNNVANALMQGAAIMGMDFHLVCPKELNPD  194 (332)
T ss_pred             -CCEEECC-------CCCCChHHHHHHHHHHHHHhcCCcCCcEEEEecCCCcchHHHHHHHHHHcCCEEEEECCccccCC
Confidence             3345532       1346799888877777665 457999999999985 3579999999999999999986432    


Q ss_pred             ---------------------CCHHhhhccCcEEEEe
Q 027064          202 ---------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       202 ---------------------~~l~~~~~~aDivisA  217 (229)
                                           .|+.+.++.||+|.+-
T Consensus       195 ~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~  231 (332)
T PRK04284        195 DELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTD  231 (332)
T ss_pred             HHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence                                 3556788999999874

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.17  E-value=0.00096  Score=63.40  Aligned_cols=64  Identities=27%  Similarity=0.331  Sum_probs=49.4

Q ss_pred             HHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----CHHhh----------------hccCcEEEEe
Q 027064          158 LKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----DPESI----------------VREADIVIAA  217 (229)
Q Consensus       158 L~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----~l~~~----------------~~~aDivisA  217 (229)
                      |.+.+.++.|++|+|||.|.+ |..+|..|.++|++|++++....    .+.+.                ...+|.||.+
T Consensus         7 ~~~~~~~~~~~~v~viG~G~~-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~D~Vv~s   85 (480)
T PRK01438          7 LTSWHSDWQGLRVVVAGLGVS-GFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPTLPEDTDLVVTS   85 (480)
T ss_pred             hhhcccCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCccccCCCCEEEEC
Confidence            456677889999999999995 99999999999999999975432    11111                2348999999


Q ss_pred             cCCCC
Q 027064          218 AGQAM  222 (229)
Q Consensus       218 ~g~p~  222 (229)
                      +|.|.
T Consensus        86 ~Gi~~   90 (480)
T PRK01438         86 PGWRP   90 (480)
T ss_pred             CCcCC
Confidence            99753

>PRK14031 glutamate dehydrogenase; Provisional

Probab=97.17  E-value=0.0043  Score=59.25  Aligned_cols=53  Identities=25%  Similarity=0.290  Sum_probs=44.8

Q ss_pred             CcccCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEE-Ec
Q 027064          145 LFLPCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTI-VH  198 (229)
Q Consensus       145 ~~~PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv-~~  198 (229)
                      .--+.|.+|++..+++    .+.+++||+|+|.|.|+ ||.-++.+|.+.||+|+. ++
T Consensus       202 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~rVaVQGfGN-VG~~aA~~L~e~GAkVVaVSD  259 (444)
T PRK14031        202 IRPEATGYGNIYFLMEMLKTKGTDLKGKVCLVSGSGN-VAQYTAEKVLELGGKVVTMSD  259 (444)
T ss_pred             CCCcccHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEC
Confidence            3457899988766554    57899999999999999 599999999999999876 55

>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]

Probab=97.15  E-value=0.0006  Score=62.26  Aligned_cols=83  Identities=25%  Similarity=0.286  Sum_probs=63.2

Q ss_pred             CcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccC
Q 027064          145 LFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREA  211 (229)
Q Consensus       145 ~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~a  211 (229)
                      .++-|--.-+--+-+...+-+.||.+||.|.|. |||.-|..|...|+.|++....-.             .+.+.++++
T Consensus       192 nLygcreSl~DgikraTDvM~aGKv~Vv~GYGd-VGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~  270 (434)
T KOG1370|consen  192 NLYGCRESLLDGIKRATDVMIAGKVAVVCGYGD-VGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREV  270 (434)
T ss_pred             ccccchhhhhhhhhhhhhheecccEEEEeccCc-cchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcC
Confidence            344454333333344456778999999999999 599999999999999998854321             366889999


Q ss_pred             cEEEEecCCCCCCCCCC
Q 027064          212 DIVIAAAGQAMMVTMGI  228 (229)
Q Consensus       212 DivisA~g~p~~i~~~~  228 (229)
                      ||+|++||.-..|+.++
T Consensus       271 difVTtTGc~dii~~~H  287 (434)
T KOG1370|consen  271 DIFVTTTGCKDIITGEH  287 (434)
T ss_pred             CEEEEccCCcchhhHHH
Confidence            99999999998886543

>PRK00779 ornithine carbamoyltransferase; Provisional

Probab=97.12  E-value=0.042  Score=49.99  Aligned_cols=148  Identities=18%  Similarity=0.153  Sum_probs=102.1

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF  129 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~  129 (229)
                      .|..---+=..++.++|.++..+.-..+  ...|.+.+.++-|+.-  +|+|.+-.|  .+-...++.+.       -++
T Consensus        53 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~--~D~iv~R~~--~~~~~~~~a~~-------~~v  121 (304)
T PRK00779         53 PSTRTRVSFEVGMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRY--VDAIMIRTF--EHETLEELAEY-------STV  121 (304)
T ss_pred             CCchHHHHHHHHHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHh--CCEEEEcCC--ChhHHHHHHHh-------CCC
Confidence            5666666778899999999888753221  1125566776666655  788888765  32222333222       224


Q ss_pred             CccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------
Q 027064          130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------  201 (229)
Q Consensus       130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------  201 (229)
                      --+|.|-       ....||=+.+=+--+.+.-..++|++++++|...-|.+.++.+|..-|++|++|+-.+        
T Consensus       122 PVINag~-------~~~HPtQaL~Dl~Ti~e~~g~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~  194 (304)
T PRK00779        122 PVINGLT-------DLSHPCQILADLLTIYEHRGSLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEPDPEIV  194 (304)
T ss_pred             CEEeCCC-------CCCChHHHHHHHHHHHHHhCCcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCCCHHHH
Confidence            4566641       3466998887776665544579999999999966689999999999999999986432        


Q ss_pred             --------------CCHHhhhccCcEEEEe
Q 027064          202 --------------TDPESIVREADIVIAA  217 (229)
Q Consensus       202 --------------~~l~~~~~~aDivisA  217 (229)
                                    .++.+.++.||+|..-
T Consensus       195 ~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~  224 (304)
T PRK00779        195 EKIAKETGASIEVTHDPKEAVKGADVVYTD  224 (304)
T ss_pred             HHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence                          2556788999999874

>PRK07574 formate dehydrogenase; Provisional

Probab=97.12  E-value=0.0013  Score=61.61  Aligned_cols=56  Identities=25%  Similarity=0.326  Sum_probs=48.7

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g  219 (229)
                      .++.||+|.|||.|.+ |+.+|..|...|++|..+++..              .++.+.+++||+|+...+
T Consensus       188 ~~L~gktVGIvG~G~I-G~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lP  257 (385)
T PRK07574        188 YDLEGMTVGIVGAGRI-GLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCP  257 (385)
T ss_pred             eecCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCC
Confidence            4589999999999996 9999999999999999887642              256788999999998876

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=97.11  E-value=0.0016  Score=59.39  Aligned_cols=56  Identities=9%  Similarity=0.069  Sum_probs=47.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------CCHHhhhccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------~~l~~~~~~aDivisA~g  219 (229)
                      ..+.||+|.|||-|.+ |+.+|..|...|+.|+..++..            .++.+.+++||+|+.+.+
T Consensus       132 ~~l~g~tvgIvG~G~I-G~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lP  199 (312)
T PRK15469        132 YHREDFTIGILGAGVL-GSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLP  199 (312)
T ss_pred             CCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCC
Confidence            4689999999999996 9999999999999998876532            146788999999998876

>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1

Probab=97.11  E-value=0.0011  Score=59.77  Aligned_cols=80  Identities=19%  Similarity=0.347  Sum_probs=67.5

Q ss_pred             CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhC----CC-------EEEEEcCCC----------------
Q 027064          149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA----DA-------TVTIVHSHT----------------  201 (229)
Q Consensus       149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~----~a-------tVtv~~~~t----------------  201 (229)
                      ++..|++.-++-.+.+++.-+++++|+|.. |-.++.+|...    |.       .+++|+++-                
T Consensus         7 V~lAgllnAlk~~g~~l~d~~iv~~GAGsA-g~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~   85 (279)
T cd05312           7 VALAGLLAALRITGKPLSDQRILFLGAGSA-GIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPF   85 (279)
T ss_pred             HHHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHH
Confidence            456788999999999999999999999998 99999988764    76       688887741                


Q ss_pred             ---------CCHHhhhc--cCcEEEEecCCCCCCCCCCC
Q 027064          202 ---------TDPESIVR--EADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 ---------~~l~~~~~--~aDivisA~g~p~~i~~~~v  229 (229)
                               .+|.+.++  ++|++|-.+|.|+.++.|||
T Consensus        86 a~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv  124 (279)
T cd05312          86 ARKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVV  124 (279)
T ss_pred             HhhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHH
Confidence                     14667788  88999999999999998864

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=97.10  E-value=0.0016  Score=59.20  Aligned_cols=56  Identities=25%  Similarity=0.310  Sum_probs=48.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g  219 (229)
                      .++.||++.|||.|.+ |+.+|.+|..-|++|..+++..         .++.+.+++||+|+...+
T Consensus       141 ~~L~gktvGIiG~G~I-G~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~P  205 (311)
T PRK08410        141 GEIKGKKWGIIGLGTI-GKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAP  205 (311)
T ss_pred             cccCCCEEEEECCCHH-HHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCC
Confidence            3689999999999996 9999999999999999887632         157889999999999876

>PRK02102 ornithine carbamoyltransferase; Validated

Probab=97.09  E-value=0.069  Score=49.26  Aligned_cols=187  Identities=16%  Similarity=0.061  Sum_probs=117.4

Q ss_pred             hcccHHHHHHHHHHHHHHHHHHHhcC--C-----CCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC--CC
Q 027064           11 IIDGKAVAQTIRSEIAEEVRLLSEKY--G-----KVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ--VS   81 (229)
Q Consensus        11 il~G~~la~~i~~~i~~~~~~l~~~~--~-----~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~   81 (229)
                      +|+-..+.++=.+.+-+...++++..  +     ...+.+..++-+  .|..---+=..++.++|..+.+.....+  ..
T Consensus        10 ~l~~~dls~~ei~~ll~~A~~~k~~~~~~~~~~~L~gk~v~~lF~e--pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~k   87 (331)
T PRK02102         10 FLKLLDFTPEEIEYLIDLSIELKAAKKAGIEHQYLEGKNIALIFEK--TSTRTRCAFEVAAIDLGAHVTYLGPNDSQLGK   87 (331)
T ss_pred             ccchHHCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCEEEEEeCC--CChhHHHHHHHHHHHcCCCEEEcCcccccCCC
Confidence            55555555444444444444444311  1     122333333332  5666666778899999999885532110  12


Q ss_pred             HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHh
Q 027064           82 EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS  161 (229)
Q Consensus        82 ~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~  161 (229)
                      .|.+.+.++-|+.-  +|+|.+--|  ++-..+++.+..    +   +--+|.|-       ....||=+.+=+--+++.
T Consensus        88 gEsl~Dt~rvls~y--~D~iviR~~--~~~~~~~~a~~~----~---vPVINa~~-------~~~HPtQaLaDl~Ti~e~  149 (331)
T PRK02102         88 KESIEDTARVLGRM--YDGIEYRGF--KQEIVEELAKYS----G---VPVWNGLT-------DEWHPTQMLADFMTMKEH  149 (331)
T ss_pred             CcCHHHHHHHHhhc--CCEEEEECC--chHHHHHHHHhC----C---CCEEECCC-------CCCChHHHHHHHHHHHHH
Confidence            26677777777655  889999866  322223333332    2   23455431       346699888877777655


Q ss_pred             CCCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEE
Q 027064          162 GVTIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVI  215 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivi  215 (229)
                      -..++|+++++||.. .-|.++++.+|..-|++|++|+-..                         .++.+.++.||+|.
T Consensus       150 ~g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy  229 (331)
T PRK02102        150 FGPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRICAPKELWPEEELVALAREIAKETGAKITITEDPEEAVKGADVIY  229 (331)
T ss_pred             hCCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEE
Confidence            557999999999996 4489999999999999999985432                         24557789999998


Q ss_pred             Ee
Q 027064          216 AA  217 (229)
Q Consensus       216 sA  217 (229)
                      +-
T Consensus       230 t~  231 (331)
T PRK02102        230 TD  231 (331)
T ss_pred             Ec
Confidence            74

>PRK02255 putrescine carbamoyltransferase; Provisional

Probab=97.08  E-value=0.065  Score=49.55  Aligned_cols=147  Identities=15%  Similarity=0.120  Sum_probs=101.1

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF  129 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~  129 (229)
                      .|..---+=..++.++|-.+..+.-...  -..|.+.+.++-|+.-  +|+|.+-.|  .|-..+++.+..       ++
T Consensus        52 pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y--~D~iviR~~--~~~~~~~~a~~~-------~v  120 (338)
T PRK02255         52 SSTRTRVSFETAMTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRL--VDIIMARVD--RHQTVVELAKYA-------TV  120 (338)
T ss_pred             CCcchHHHHHHHHHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHh--CcEEEEecC--ChHHHHHHHHhC-------CC
Confidence            4555556778899999999888753211  1126677777777665  789988865  333333333322       23


Q ss_pred             CccchhhhhccCCCCCcccCCHHHHHHHH-HHhC--CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-----
Q 027064          130 HPLNIGKLAMKGRDPLFLPCTPKGCLELL-KRSG--VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-----  201 (229)
Q Consensus       130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL-~~~~--~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-----  201 (229)
                      --+|.|       .....||=+.+=+--+ |+.+  .+++|++|++||-..-|.+.++.+|...|++|++|+-..     
T Consensus       121 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~  193 (338)
T PRK02255        121 PVINGM-------SDYNHPTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDFVHFGPKGYQLPE  193 (338)
T ss_pred             CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEEEEECCCccccCH
Confidence            445532       1346799887766655 4443  369999999999977789999999999999999986432     


Q ss_pred             --------------------CCHHhhhccCcEEEE
Q 027064          202 --------------------TDPESIVREADIVIA  216 (229)
Q Consensus       202 --------------------~~l~~~~~~aDivis  216 (229)
                                          .++.+.++.||+|.+
T Consensus       194 ~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~  228 (338)
T PRK02255        194 EHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYT  228 (338)
T ss_pred             HHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEE
Confidence                                355678999999987

>PRK08605 D-lactate dehydrogenase; Validated

Probab=97.06  E-value=0.0017  Score=59.58  Aligned_cols=57  Identities=26%  Similarity=0.318  Sum_probs=47.9

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHH-hhCCCEEEEEcCCC-----------CCHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLL-LKADATVTIVHSHT-----------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L-~~~~atVtv~~~~t-----------~~l~~~~~~aDivisA~g~  220 (229)
                      .++.|++|.|||.|.+ |+.+|.+| ...|++|+..++..           .++.+.+++||+|+.+++.
T Consensus       142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~~g~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvIvl~lP~  210 (332)
T PRK08605        142 RSIKDLKVAVIGTGRI-GLAVAKIFAKGYGSDVVAYDPFPNAKAATYVDYKDTIEEAVEGADIVTLHMPA  210 (332)
T ss_pred             ceeCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCccHhHHhhccccCCHHHHHHhCCEEEEeCCC
Confidence            4689999999999996 99999999 55688998886532           3678889999999999874

>PRK06932 glycerate dehydrogenase; Provisional

Probab=97.05  E-value=0.0017  Score=59.11  Aligned_cols=56  Identities=23%  Similarity=0.303  Sum_probs=47.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------CCHHhhhccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------~~l~~~~~~aDivisA~g  219 (229)
                      .++.||++.|||.|.+ |+-+|.+|..-|++|...++..        .++.+.+++||+|+.+.+
T Consensus       143 ~~l~gktvgIiG~G~I-G~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~P  206 (314)
T PRK06932        143 TDVRGSTLGVFGKGCL-GTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCP  206 (314)
T ss_pred             cccCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCC
Confidence            3689999999999996 9999999999999998775432        157899999999998876

>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme

Probab=97.03  E-value=0.001  Score=59.11  Aligned_cols=80  Identities=19%  Similarity=0.239  Sum_probs=66.9

Q ss_pred             CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-----------EEEEEcCCC----------------
Q 027064          149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-----------TVTIVHSHT----------------  201 (229)
Q Consensus       149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-----------tVtv~~~~t----------------  201 (229)
                      +|..|++.-++-.+.+++.-+++++|+|.. |-.++.+|...+.           .+++|+++-                
T Consensus         7 V~lAgllnAlk~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~   85 (254)
T cd00762           7 VAVAGLLAALKVTKKKISEHKVLFNGAGAA-ALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHL   85 (254)
T ss_pred             HHHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHH
Confidence            456788999999999999999999999998 9999999976543           588887741                


Q ss_pred             ----------CCHHhhhc--cCcEEEEecCCCCCCCCCCC
Q 027064          202 ----------TDPESIVR--EADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 ----------~~l~~~~~--~aDivisA~g~p~~i~~~~v  229 (229)
                                .+|.+.++  ++|++|-.+|.|+.+|.|||
T Consensus        86 ~~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv  125 (254)
T cd00762          86 ARFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVI  125 (254)
T ss_pred             HHHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHH
Confidence                      14667788  89999999999999998874

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut

>PRK06487 glycerate dehydrogenase; Provisional

Probab=97.03  E-value=0.002  Score=58.79  Aligned_cols=56  Identities=18%  Similarity=0.207  Sum_probs=48.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------CCHHhhhccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------~~l~~~~~~aDivisA~g  219 (229)
                      .++.||++.|||.|.+ |+.+|.+|..-|++|...++..       .++.+.+++||+|+...+
T Consensus       144 ~~l~gktvgIiG~G~I-G~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lP  206 (317)
T PRK06487        144 VELEGKTLGLLGHGEL-GGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCP  206 (317)
T ss_pred             cccCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCC
Confidence            3689999999999996 9999999999999998776531       257899999999998876

>TIGR00658 orni_carb_tr ornithine carbamoyltransferase

Probab=97.02  E-value=0.048  Score=49.58  Aligned_cols=148  Identities=20%  Similarity=0.183  Sum_probs=102.2

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF  129 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~  129 (229)
                      .|..---+=..++.++|..+..+.-..+  ...|-+.+.++-|+.-  +|+|.+-.|-.  -..+.+.+..       ++
T Consensus        49 pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y--~D~iv~R~~~~--~~~~~~a~~~-------~v  117 (304)
T TIGR00658        49 PSTRTRVSFEVAAYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRY--VDGIMARVYKH--EDVEELAKYA-------SV  117 (304)
T ss_pred             CCcchHHHHHHHHHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHh--CCEEEEECCCh--HHHHHHHHhC-------CC
Confidence            4555566678899999999887743221  1125666666666655  78999986632  2223333332       13


Q ss_pred             CccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------
Q 027064          130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------  201 (229)
Q Consensus       130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------  201 (229)
                      --+|.|       .....||=+.+=+--+.++-..++|.+|+++|...-|-+.++.+|..-|+.|++|+-..        
T Consensus       118 PVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~  190 (304)
T TIGR00658       118 PVINGL-------TDLFHPCQALADLLTIIEHFGKLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVATPEGYEPDADIV  190 (304)
T ss_pred             CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEECCchhcCCHHHH
Confidence            345553       13467998888766665554469999999999966789999999999999999996432        


Q ss_pred             -----------------CCHHhhhccCcEEEEe
Q 027064          202 -----------------TDPESIVREADIVIAA  217 (229)
Q Consensus       202 -----------------~~l~~~~~~aDivisA  217 (229)
                                       .++.+.++.||+|..-
T Consensus       191 ~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~  223 (304)
T TIGR00658       191 KKAQEIAKENGGSVELTHDPVEAVKGADVIYTD  223 (304)
T ss_pred             HHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence                             2556789999999874

Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.

>TIGR00670 asp_carb_tr aspartate carbamoyltransferase

Probab=97.01  E-value=0.069  Score=48.55  Aligned_cols=149  Identities=14%  Similarity=0.108  Sum_probs=103.1

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG  128 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg  128 (229)
                      +|..---+=..++.++|..+..+.-+.+.   ..|-+.+..+-|+.-  +|+|.+-.|  .|-...++.+..       +
T Consensus        49 pSTRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y--~D~iviR~~--~~~~~~~~a~~s-------~  117 (301)
T TIGR00670        49 PSTRTRLSFETAMKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGY--SDAIVIRHP--LEGAARLAAEVS-------E  117 (301)
T ss_pred             CCchhHhHHHHHHHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHh--CCEEEEECC--chhHHHHHHhhC-------C
Confidence            46666667788999999988877542221   125555555555544  789999865  444444444432       2


Q ss_pred             cCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcCCC-----
Q 027064          129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHSHT-----  201 (229)
Q Consensus       129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~~t-----  201 (229)
                      +--+|.|-      .....||=+.+=+--++++-.+++|++|+++|-+  .-|.+.++.++..-|+.|++|+-..     
T Consensus       118 vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~  191 (301)
T TIGR00670       118 VPVINAGD------GSNQHPTQTLLDLYTIYEEFGRLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEELRMPK  191 (301)
T ss_pred             CCEEeCCC------CCCCCcHHHHHHHHHHHHHhCCCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccccCCH
Confidence            34455431      1346799888877766655447999999999996  5679999999999999999986543     


Q ss_pred             ----------------CCHHhhhccCcEEEEe
Q 027064          202 ----------------TDPESIVREADIVIAA  217 (229)
Q Consensus       202 ----------------~~l~~~~~~aDivisA  217 (229)
                                      .|+.+.++.||+|.+-
T Consensus       192 ~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~  223 (301)
T TIGR00670       192 EILEELKAKGIKVRETESLEEVIDEADVLYVT  223 (301)
T ss_pred             HHHHHHHHcCCEEEEECCHHHHhCCCCEEEEC
Confidence                            2456778999998874

Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.

>PRK14805 ornithine carbamoyltransferase; Provisional

Probab=97.00  E-value=0.1  Score=47.45  Aligned_cols=130  Identities=15%  Similarity=0.096  Sum_probs=90.7

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG  128 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg  128 (229)
                      .|..---+=..++.++|.++..+.- .+.   .-|.+.+.++-|+.-  +|+|.+-.|  .+-...++.+..    +   
T Consensus        48 pSTRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dt~~vls~y--~D~iviR~~--~~~~~~~~a~~~----~---  115 (302)
T PRK14805         48 PSLRTRVSFDIGINKLGGHCLYLDQ-QNGALGKRESVADFAANLSCW--ADAIVARVF--SHSTIEQLAEHG----S---  115 (302)
T ss_pred             CCchHHHHHHHHHHHcCCcEEECCC-CcCcCCCCcCHHHHHHHHHHh--CCEEEEeCC--ChhHHHHHHHhC----C---
Confidence            4655556778899999999888652 221   125666666666655  789999865  333233333322    2   


Q ss_pred             cCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +--+|.|-       ....||=+.+=+--+++...+++|++|++||-+..|.+.++.+|..-|+.|++|+-.
T Consensus       116 vPVINa~~-------~~~HPtQaL~Dl~Ti~e~~g~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~  180 (302)
T PRK14805        116 VPVINALC-------DLYHPCQALADFLTLAEQFGDVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPP  180 (302)
T ss_pred             CCEEECCC-------CCCChHHHHHHHHHHHHHhCCcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCc
Confidence            34455531       246799888877666655457999999999998889999999999999999999643

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.99  E-value=0.0011  Score=54.06  Aligned_cols=52  Identities=31%  Similarity=0.426  Sum_probs=41.9

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------CCHHhhhccCcEEEEecCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------~~l~~~~~~aDivisA~g~  220 (229)
                      +|+|+|+|.. |..+|..|..+|.+|++..+..                            .|+++.++.||+||.|++.
T Consensus         1 KI~ViGaG~~-G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs   79 (157)
T PF01210_consen    1 KIAVIGAGNW-GTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS   79 (157)
T ss_dssp             EEEEESSSHH-HHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred             CEEEECcCHH-HHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence            6899999997 9999999999999999985531                            2677889999999999874


Q ss_pred             C
Q 027064          221 A  221 (229)
Q Consensus       221 p  221 (229)
                      -
T Consensus        80 ~   80 (157)
T PF01210_consen   80 Q   80 (157)
T ss_dssp             G
T ss_pred             H
Confidence            3

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.99  E-value=0.0019  Score=59.28  Aligned_cols=57  Identities=23%  Similarity=0.281  Sum_probs=50.3

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g  219 (229)
                      +.++.||++-|||.|.+ |+-++..|..-|++|..++..+.             +|.+.+++||||+.-++
T Consensus       137 g~el~gkTvGIiG~G~I-G~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~P  206 (324)
T COG0111         137 GTELAGKTVGIIGLGRI-GRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLP  206 (324)
T ss_pred             cccccCCEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCC
Confidence            56789999999999996 99999999999999999988432             48899999999998776

>PLN02342 ornithine carbamoyltransferase

Probab=96.95  E-value=0.07  Score=49.54  Aligned_cols=148  Identities=14%  Similarity=0.037  Sum_probs=101.6

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF  129 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~  129 (229)
                      .|..---+=..++.++|.++..+.-...  ...|.+.+.++-|..-  +|+|.+-.|-.  -..+++.+..       .+
T Consensus        95 pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kGESl~DTarvLs~y--~D~IviR~~~~--~~~~~la~~~-------~v  163 (348)
T PLN02342         95 PSMRTRVSFETGFFLLGGHALYLGPDDIQLGKREETRDIARVLSRY--NDIIMARVFAH--QDVLDLAEYS-------SV  163 (348)
T ss_pred             CCcchHHHHHHHHHHcCCcEEEeCcccccCCCCcCHHHHHHHHHHh--CCEEEEeCCCh--HHHHHHHHhC-------CC
Confidence            4555555677889999999988743221  1225666666666655  78999986632  2223333322       23


Q ss_pred             CccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------
Q 027064          130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------  201 (229)
Q Consensus       130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------  201 (229)
                      --+|.|       ...+.||=+.+=+--+.+.-.+++|++|++||-..-|-+.++.+|...|++|++|+-.+        
T Consensus       164 PVINA~-------~~~~HPtQaLaDl~Ti~e~~G~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~  236 (348)
T PLN02342        164 PVINGL-------TDYNHPCQIMADALTIIEHIGRLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEPDAKTV  236 (348)
T ss_pred             CEEECC-------CCCCChHHHHHHHHHHHHHhCCcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccccCHHHH
Confidence            445542       13467998887666665444479999999999988899999999999999999985432        


Q ss_pred             --------------CCHHhhhccCcEEEEe
Q 027064          202 --------------TDPESIVREADIVIAA  217 (229)
Q Consensus       202 --------------~~l~~~~~~aDivisA  217 (229)
                                    .|+.+.++.||+|.+-
T Consensus       237 ~~a~~~g~~~~~~~~d~~eav~~aDVvy~~  266 (348)
T PLN02342        237 EKARAAGISKIEITNDPAEAVKGADVVYTD  266 (348)
T ss_pred             HHHHHhCCCcEEEEcCHHHHhCCCCEEEEC
Confidence                          3556789999999876

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=96.95  E-value=0.0019  Score=59.42  Aligned_cols=56  Identities=20%  Similarity=0.218  Sum_probs=48.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g~  220 (229)
                      .++||+|.|||-|.+ |+++|..|...|+.|++.++..+             ++.+.+++||+|+..++-
T Consensus        13 ~LkgKtVGIIG~GsI-G~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd   81 (335)
T PRK13403         13 LLQGKTVAVIGYGSQ-GHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPD   81 (335)
T ss_pred             hhCcCEEEEEeEcHH-HHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCC
Confidence            478999999999996 99999999999999998865421             577889999999988764

>PRK12562 ornithine carbamoyltransferase subunit F; Provisional

Probab=96.95  E-value=0.075  Score=49.08  Aligned_cols=149  Identities=15%  Similarity=0.039  Sum_probs=101.4

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCC--CCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPE--QVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF  129 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~--~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~  129 (229)
                      +|..---+=..++.++|..+.++....  -...|.+.+.++-|+.-  +|+|.+-.|-.  -..+++.+..    +   +
T Consensus        55 pSTRTR~SFE~A~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y--~D~iviR~~~~--~~~~~~a~~~----~---v  123 (334)
T PRK12562         55 DSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM--YDGIQYRGHGQ--EVVETLAEYA----G---V  123 (334)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHh--CCEEEEECCch--HHHHHHHHhC----C---C
Confidence            566666677788999999998774221  01226677777777665  78999987632  2223333332    2   3


Q ss_pred             CccchhhhhccCCCCCcccCCHHHHHHHH-HHhCC-CCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCCC-----
Q 027064          130 HPLNIGKLAMKGRDPLFLPCTPKGCLELL-KRSGV-TIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSHT-----  201 (229)
Q Consensus       130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL-~~~~~-~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~t-----  201 (229)
                      --+|.|       .....||=+.+=+--+ |+.+. .++|+++++||-. ..|.++++.++..-|+.|++|.-.+     
T Consensus       124 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~  196 (334)
T PRK12562        124 PVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEA  196 (334)
T ss_pred             CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcccCCcH
Confidence            345543       1246699887766655 44443 5899999999984 3479999999999999999986533     


Q ss_pred             --------------------CCHHhhhccCcEEEEec
Q 027064          202 --------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       202 --------------------~~l~~~~~~aDivisA~  218 (229)
                                          .|+.+.++.||+|.+-.
T Consensus       197 ~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~  233 (334)
T PRK12562        197 SLVAECSALAQKHGGKITLTEDIAAGVKGADFIYTDV  233 (334)
T ss_pred             HHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence                                35557789999998753

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.94  E-value=0.0014  Score=53.67  Aligned_cols=52  Identities=25%  Similarity=0.348  Sum_probs=42.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~  220 (229)
                      ++|-+||-|.+ |.+++..|.++|.+|+++++..              .+..+.++++|+||+++..
T Consensus         2 ~~Ig~IGlG~m-G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~   67 (163)
T PF03446_consen    2 MKIGFIGLGNM-GSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPD   67 (163)
T ss_dssp             BEEEEE--SHH-HHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSS
T ss_pred             CEEEEEchHHH-HHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeeccc
Confidence            58999999996 9999999999999999998753              1567889999999998764

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN03129 NADP-dependent malic enzyme; Provisional

Probab=96.94  E-value=0.0044  Score=60.82  Aligned_cols=153  Identities=17%  Similarity=0.191  Sum_probs=104.1

Q ss_pred             HHHHHHHH-cCCe---eeeecCCCCCCH--------------------------HHHHHHHHHhcCCCCC-cEEEEeCCC
Q 027064           59 MKRKACAE-VGIK---SFDIDLPEQVSE--------------------------AELISKVHELNVMPDV-HGILVQLPL  107 (229)
Q Consensus        59 ~k~k~a~~-~Gi~---~~~~~l~~~~~~--------------------------~el~~~I~~lN~d~~v-~GIlvq~Pl  107 (229)
                      .|.-.+.. .||+   +-.+.|+..+..                          +||++.++.     .. -..++|.=-
T Consensus       199 GKl~Ly~a~aGI~P~~~lPI~LDvGTnNe~LL~DP~YlG~r~~Rv~g~eY~~~~defv~av~~-----~fGp~~~I~~ED  273 (581)
T PLN03129        199 GKLDLYTAAGGIRPSAVLPVCIDVGTNNEKLLNDPFYIGLRQPRLTGEEYDELVDEFMEAVKQ-----RWGPKVLVQFED  273 (581)
T ss_pred             hHHHHHHhhcCCChhhccceEEecCCCchhhccCccccCcCCCCCchhhHHHhHHHHHHHHHH-----HhCCccEEehhh
Confidence            46666665 4888   666777754333                          555555555     12 124555443


Q ss_pred             CCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHH
Q 027064          108 PKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLL  187 (229)
Q Consensus       108 p~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L  187 (229)
                      .+.-+--++++...  .++-.||          |+..+-.-++..|++.-++-.+.+++.-+++++|+|.. |-.+|.+|
T Consensus       274 f~~~~af~iL~ryr--~~i~~Fn----------DDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsA-gigia~ll  340 (581)
T PLN03129        274 FANKNAFRLLQRYR--TTHLCFN----------DDIQGTAAVALAGLLAALRATGGDLADQRILFAGAGEA-GTGIAELI  340 (581)
T ss_pred             cCCccHHHHHHHhc--cCCCEec----------cccchHHHHHHHHHHHHHHHhCCchhhceEEEECCCHH-HHHHHHHH
Confidence            33333344444332  2333333          22445557788999999999999999999999999998 99999988


Q ss_pred             hh-----CCC-------EEEEEcCCC------------------------CCHHhhhcc--CcEEEEecCCCCCCCCCCC
Q 027064          188 LK-----ADA-------TVTIVHSHT------------------------TDPESIVRE--ADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       188 ~~-----~~a-------tVtv~~~~t------------------------~~l~~~~~~--aDivisA~g~p~~i~~~~v  229 (229)
                      ..     .|.       .+++|+++-                        .+|.+.++.  +|++|-++|.|+.++++||
T Consensus       341 ~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi  420 (581)
T PLN03129        341 ALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFKKPFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVL  420 (581)
T ss_pred             HHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccChHHHHHHHhhcccCCCHHHHHhccCCCEEEEecCCCCCCCHHHH
Confidence            76     365       688887741                        146677888  8999999999999998874

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=96.94  E-value=0.0019  Score=53.87  Aligned_cols=54  Identities=24%  Similarity=0.325  Sum_probs=42.2

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g  219 (229)
                      |+||+|.|||.|.- |+.-|..|.+.|.+|+++.+...              +..+..++||+|+..++
T Consensus         2 l~~k~IAViGyGsQ-G~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~P   69 (165)
T PF07991_consen    2 LKGKTIAVIGYGSQ-GHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLP   69 (165)
T ss_dssp             HCTSEEEEES-SHH-HHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-
T ss_pred             cCCCEEEEECCChH-HHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCC
Confidence            57999999999997 99999999999999999977643              46688999999998764

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK13529 malate dehydrogenase; Provisional

Probab=96.90  E-value=0.0077  Score=58.93  Aligned_cols=153  Identities=20%  Similarity=0.254  Sum_probs=108.0

Q ss_pred             HHHHHHHHc-CCe---eeeecCCCCCC--------------------------HHHHHHHHHHhcCCCCCcEEEEeCCCC
Q 027064           59 MKRKACAEV-GIK---SFDIDLPEQVS--------------------------EAELISKVHELNVMPDVHGILVQLPLP  108 (229)
Q Consensus        59 ~k~k~a~~~-Gi~---~~~~~l~~~~~--------------------------~~el~~~I~~lN~d~~v~GIlvq~Plp  108 (229)
                      .|.-....+ ||+   +--+.|+..+.                          .+||++.++++=  |+   .++|.==.
T Consensus       174 GKl~Ly~a~aGI~P~~~lPI~LDvGTnNe~Ll~DP~YlG~r~~R~~g~eY~~f~defv~av~~~~--P~---~~I~~EDf  248 (563)
T PRK13529        174 GKLSLYTACGGIDPARTLPVVLDVGTNNEQLLNDPLYLGWRHPRIRGEEYDEFVDEFVQAVKRRF--PN---ALLQFEDF  248 (563)
T ss_pred             cHHHHhhccCCCChhheeceEEecCCCchhhccCccccCcCCCCCchHHHHHHHHHHHHHHHHhC--CC---eEEehhhc
Confidence            466655555 688   66667775432                          367778787775  44   25655433


Q ss_pred             CCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHh
Q 027064          109 KHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL  188 (229)
Q Consensus       109 ~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~  188 (229)
                      +.-+--++++...  +++-.||          |+..+-.-++..|++.-++-.+.+++.-++++.|+|.. |-.+|.+|.
T Consensus       249 ~~~~af~iL~ryr--~~i~~Fn----------DDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsA-giGia~ll~  315 (563)
T PRK13529        249 AQKNARRILERYR--DEICTFN----------DDIQGTGAVTLAGLLAALKITGEPLSDQRIVFLGAGSA-GCGIADQIV  315 (563)
T ss_pred             CCchHHHHHHHhc--cCCCeec----------cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHH
Confidence            3344444544432  2333333          23455557788999999999999999999999999998 999999988


Q ss_pred             h----CCC-------EEEEEcCC---C-----------------------------CCHHhhhccC--cEEEEecCCCCC
Q 027064          189 K----ADA-------TVTIVHSH---T-----------------------------TDPESIVREA--DIVIAAAGQAMM  223 (229)
Q Consensus       189 ~----~~a-------tVtv~~~~---t-----------------------------~~l~~~~~~a--DivisA~g~p~~  223 (229)
                      .    .|.       .+++|+++   +                             .+|.+.++.+  |++|-++|.|+.
T Consensus       316 ~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~~~~~L~e~v~~~kPtvLIG~S~~~g~  395 (563)
T PRK13529        316 AAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEGDVISLLEVVRNVKPTVLIGVSGQPGA  395 (563)
T ss_pred             HHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhcccccccccccCCCCHHHHHhccCCCEEEEecCCCCC
Confidence            6    576       68888774   1                             1456788888  999999999999


Q ss_pred             CCCCCC
Q 027064          224 VTMGIL  229 (229)
Q Consensus       224 i~~~~v  229 (229)
                      ++.|||
T Consensus       396 Ft~evv  401 (563)
T PRK13529        396 FTEEIV  401 (563)
T ss_pred             CCHHHH
Confidence            998864

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=96.89  E-value=0.0031  Score=57.70  Aligned_cols=57  Identities=18%  Similarity=0.271  Sum_probs=47.8

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHh-hCCCEEEEEcCCC------------CCHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLL-KADATVTIVHSHT------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~-~~~atVtv~~~~t------------~~l~~~~~~aDivisA~g  219 (229)
                      +.++.||++.|||.|.+ |+.+|..|. .-|++|...++..            .++.+.+++||+|+...+
T Consensus       140 g~~L~gktvGIiG~G~I-G~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~p  209 (323)
T PRK15409        140 GTDVHHKTLGIVGMGRI-GMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILP  209 (323)
T ss_pred             cCCCCCCEEEEEcccHH-HHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCC
Confidence            45789999999999996 999999997 8899988776542            156788999999998876

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=96.88  E-value=0.003  Score=59.62  Aligned_cols=56  Identities=21%  Similarity=0.304  Sum_probs=49.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------CCHHhhhccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------~~l~~~~~~aDivisA~g  219 (229)
                      .++.||++.|||.|.+ |+.+|.+|..-|++|..+++..          .++.+.+++||+|+...+
T Consensus       147 ~~L~gktvGIiG~G~I-G~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~P  212 (409)
T PRK11790        147 FEVRGKTLGIVGYGHI-GTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVP  212 (409)
T ss_pred             ccCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCC
Confidence            5689999999999996 9999999999999999887532          268899999999998876

>PRK01713 ornithine carbamoyltransferase; Provisional

Probab=96.87  E-value=0.094  Score=48.36  Aligned_cols=146  Identities=16%  Similarity=0.101  Sum_probs=99.2

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCCC----CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQV----SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD  127 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~----~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVD  127 (229)
                      +|..---+=..++.++|..+..+  +.+.    ..|.+.+.++-|+.-  +|+|.+--|  .+-..+++.+..    +  
T Consensus        56 pSTRTR~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iv~R~~--~~~~~~~~a~~~----~--  123 (334)
T PRK01713         56 TSTRTRCAFEVAAYDQGAQVTYI--DPNSSQIGHKESMKDTARVLGRM--YDAIEYRGF--KQSIVNELAEYA----G--  123 (334)
T ss_pred             CCchHHHHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEEcC--chHHHHHHHHhC----C--
Confidence            45555556778899999998776  3222    226677777766655  889999865  322223333322    2  


Q ss_pred             ccCccchhhhhccCCCCCcccCCHHHHH-HHHHHhCCCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCCC----
Q 027064          128 GFHPLNIGKLAMKGRDPLFLPCTPKGCL-ELLKRSGVTIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSHT----  201 (229)
Q Consensus       128 g~~~~N~g~l~~~~~~~~~~PcTa~av~-~lL~~~~~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~t----  201 (229)
                       +--+|.+       .....||=+.+=+ .+.|+.+.+++|+++++||-. ..|.+.++.++..-|+.|++|.-.+    
T Consensus       124 -vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~  195 (334)
T PRK01713        124 -VPVFNGL-------TDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPE  195 (334)
T ss_pred             -CCEEECC-------CCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchhcCC
Confidence             3344542       2346799887764 444555557999999999986 4489999999999999999986432    


Q ss_pred             ---------------------CCHHhhhccCcEEEEe
Q 027064          202 ---------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       202 ---------------------~~l~~~~~~aDivisA  217 (229)
                                           .|+.+.++.||+|.+-
T Consensus       196 ~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~  232 (334)
T PRK01713        196 ASLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTD  232 (334)
T ss_pred             HHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence                                 2455788999999873

>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []

Probab=96.86  E-value=0.00044  Score=50.96  Aligned_cols=67  Identities=18%  Similarity=0.338  Sum_probs=47.5

Q ss_pred             HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccc
Q 027064           59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLN  133 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N  133 (229)
                      .-...++++|++..|..++  ++.+++.+.++.+.. +++.|+.|++|++     +.++..+|- ...+.-+.++|
T Consensus        14 ~hn~~f~~~g~~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~~VT~P~K-----~~~~~~~D~~~~~A~~igAvN   81 (83)
T PF08501_consen   14 IHNAAFEALGLDAVYIPFE--VEPEDLEDFLDALRA-PNFRGLNVTMPHK-----EAAIPYLDELSPSAKAIGAVN   81 (83)
T ss_dssp             HHHHHHHHTTSSEEEEEEE--TSTTCHHHHHHHHHH-TTESEEEE-TTST-----THHGGGSSEE-HHHHHHTS-S
T ss_pred             HHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHhc-CCCCeeeecchHH-----HHHHHHhccCCHHHHHhCCcc
Confidence            3567899999999999887  555667777777666 6899999999999     477777764 33444444544

Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=96.83  E-value=0.0062  Score=57.43  Aligned_cols=77  Identities=23%  Similarity=0.283  Sum_probs=58.0

Q ss_pred             cCCHHHHHHHHHHhC--CCCCCCeEEEEcc----------------chhhhHHHHHHHhhCCCEEEEEcCCCC-------
Q 027064          148 PCTPKGCLELLKRSG--VTIKGKRAVVVGR----------------SNIVGLPVSLLLLKADATVTIVHSHTT-------  202 (229)
Q Consensus       148 PcTa~av~~lL~~~~--~~l~gk~v~ViG~----------------s~~VG~pla~~L~~~~atVtv~~~~t~-------  202 (229)
                      ...|.-++..++++-  -+++||+|+|-|.                |+.+|+.+|..|..+||+|+++++.+.       
T Consensus       167 ~~~~~~I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~  246 (399)
T PRK05579        167 MAEPEEIVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGV  246 (399)
T ss_pred             CCCHHHHHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCc
Confidence            345677766666542  4689999999999                776799999999999999999876421       


Q ss_pred             ---------CHH----hhhccCcEEEEecCCCCCC
Q 027064          203 ---------DPE----SIVREADIVIAAAGQAMMV  224 (229)
Q Consensus       203 ---------~l~----~~~~~aDivisA~g~p~~i  224 (229)
                               ++.    +.....|++|.+.|...|-
T Consensus       247 ~~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        247 KRIDVESAQEMLDAVLAALPQADIFIMAAAVADYR  281 (399)
T ss_pred             EEEccCCHHHHHHHHHHhcCCCCEEEEcccccccc
Confidence                     111    2245689999999987764

>PLN02527 aspartate carbamoyltransferase

Probab=96.82  E-value=0.16  Score=46.25  Aligned_cols=150  Identities=14%  Similarity=0.114  Sum_probs=102.1

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCC-CC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPE-QV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD  127 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~-~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVD  127 (229)
                      +|..---+=..++.++|..+.++.-.. +.   ..|-+.+.++-|+.=  +|+|.+-.|  ++-...++.+..+      
T Consensus        49 pStRTR~SFe~A~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y--~D~iviR~~--~~~~~~~~a~~~~------  118 (306)
T PLN02527         49 PSTRTRLSFESAMKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGY--SDIIVLRHF--ESGAARRAAATAE------  118 (306)
T ss_pred             CCchhHHHHHHHHHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHh--CcEEEEECC--ChhHHHHHHHhCC------
Confidence            366666677889999999998886542 11   136666666666655  789999866  3333344433321      


Q ss_pred             ccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc-h-hhhHHHHHHHhhC-CCEEEEEcCCC---
Q 027064          128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS-N-IVGLPVSLLLLKA-DATVTIVHSHT---  201 (229)
Q Consensus       128 g~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s-~-~VG~pla~~L~~~-~atVtv~~~~t---  201 (229)
                       +--+|.|-      .....||=+.+=+--+++.-.+++|++|++||-+ . -|.+.++..|... |++|++|.-..   
T Consensus       119 -vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~  191 (306)
T PLN02527        119 -IPVINAGD------GPGQHPTQALLDVYTIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKM  191 (306)
T ss_pred             -CCEEECCC------CCCCChHHHHHHHHHHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCC
Confidence             33455431      1346799888877777654447999999999976 3 3688888888776 89998875422   


Q ss_pred             ------------------CCHHhhhccCcEEEEec
Q 027064          202 ------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       202 ------------------~~l~~~~~~aDivisA~  218 (229)
                                        .|+.+.++.||+|.+-.
T Consensus       192 ~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~  226 (306)
T PLN02527        192 KDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTR  226 (306)
T ss_pred             CHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECC
Confidence                              35678899999998843

>PRK06141 ornithine cyclodeaminase; Validated

Probab=96.82  E-value=0.0036  Score=56.86  Aligned_cols=64  Identities=27%  Similarity=0.253  Sum_probs=48.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhh-CC-CEEEEEcCCC--------------------CCHHhhhccCcEEEEecCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLK-AD-ATVTIVHSHT--------------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~-~~-atVtv~~~~t--------------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      ...+++.|||.|.. |++.+..+.. ++ .+|+++++..                    .+..+.+++|||||++|+.+.
T Consensus       123 ~~~~~v~iiG~G~~-a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~~  201 (314)
T PRK06141        123 KDASRLLVVGTGRL-ASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLSTE  201 (314)
T ss_pred             CCCceEEEECCcHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCCC
Confidence            46899999999996 9999875543 44 5899998741                    134567889999999999887


Q ss_pred             C-CCCCCC
Q 027064          223 M-VTMGIL  229 (229)
Q Consensus       223 ~-i~~~~v  229 (229)
                      . ++.+|+
T Consensus       202 pvl~~~~l  209 (314)
T PRK06141        202 PLVRGEWL  209 (314)
T ss_pred             CEecHHHc
Confidence            6 455553

>PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional

Probab=96.81  E-value=0.3  Score=44.60  Aligned_cols=148  Identities=15%  Similarity=0.157  Sum_probs=98.2

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCCCCH----HHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQVSE----AELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD  127 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~----~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVD  127 (229)
                      +|..---+=..++.++|..+..+  +.+.++    |-+.+.++-|+.- .+|+|++-.|  .+-..+++.+.++      
T Consensus        55 pSTRTR~SFe~A~~~LGg~~~~~--~~~~s~~~kgEsl~Dtarvls~y-~~D~iv~R~~--~~~~~~~~a~~~~------  123 (310)
T PRK13814         55 PSTRTRNSFEIAAKRLGAMVLNP--NLKISAISKGETLFDTIKTLEAM-GVYFFIVRHS--ENETPEQIAKQLS------  123 (310)
T ss_pred             CcchhHHHHHHHHHHhCCeEEEC--CCccccCCCCCCHHHHHHHHHHh-CCCEEEEeCC--chhHHHHHHHhCC------
Confidence            45555556778899999977664  332222    4455555555433 2468887755  3333333333321      


Q ss_pred             ccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc--hhhhHHHHHHHhhCCC-EEEEEcCCC---
Q 027064          128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS--NIVGLPVSLLLLKADA-TVTIVHSHT---  201 (229)
Q Consensus       128 g~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s--~~VG~pla~~L~~~~a-tVtv~~~~t---  201 (229)
                      ..-.+|.|.      .....||=+.+=+--+++.-.+++|++|++||-.  .-|.+.+..+|..-|+ .|++|+-..   
T Consensus       124 ~vPvINag~------g~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~~p  197 (310)
T PRK13814        124 SGVVINAGD------GNHQHPSQALIDLMTIKQHKPHWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSLLP  197 (310)
T ss_pred             CCCeEECCc------CCCCCchHHHHHHHHHHHHhCCcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCcccCc
Confidence            244566541      2456799888877666655557999999999986  4579999999999998 898885432   


Q ss_pred             -----------CCHHhhhccCcEEEE
Q 027064          202 -----------TDPESIVREADIVIA  216 (229)
Q Consensus       202 -----------~~l~~~~~~aDivis  216 (229)
                                 .++.+.++.||+|.+
T Consensus       198 ~~~~~~~~~~~~d~~ea~~~aDvvy~  223 (310)
T PRK13814        198 DKVGNDSIKKFTELKPSLLNSDVIVT  223 (310)
T ss_pred             CccccceEEEEcCHHHHhCCCCEEEE
Confidence                       366788999999986

>PLN03139 formate dehydrogenase; Provisional

Probab=96.80  E-value=0.0038  Score=58.64  Aligned_cols=56  Identities=18%  Similarity=0.259  Sum_probs=48.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g  219 (229)
                      .++.||+|.|||.|.+ |+.++..|..-|+.|..+++..              .++.+.+++||+|+...+
T Consensus       195 ~~L~gktVGIVG~G~I-G~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lP  264 (386)
T PLN03139        195 YDLEGKTVGTVGAGRI-GRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTP  264 (386)
T ss_pred             cCCCCCEEEEEeecHH-HHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCC
Confidence            4689999999999996 9999999999999999887531              267788999999998876

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=96.80  E-value=0.0041  Score=54.23  Aligned_cols=54  Identities=26%  Similarity=0.310  Sum_probs=45.6

Q ss_pred             CcccCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcC
Q 027064          145 LFLPCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHS  199 (229)
Q Consensus       145 ~~~PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~  199 (229)
                      ...|.|++|+...++.    .+.+++|++|+|.|.|. ||+.++.+|.++|++|+ ++++
T Consensus         5 ~~~~~Tg~Gv~~~~~~~~~~~~~~l~~~~v~I~G~G~-VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076           5 GREEATGRGVAYATREALKKLGIGLAGARVAIQGFGN-VGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CCCccchHHHHHHHHHHHHhcCCCccCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Confidence            3457899888877665    46679999999999999 59999999999999877 8876

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=96.79  E-value=0.0024  Score=58.34  Aligned_cols=63  Identities=17%  Similarity=0.182  Sum_probs=49.5

Q ss_pred             CCCeEEEEccchhhhHHHHHHHh-hCCC-EEEEEcCCC---------------------CCHHhhhccCcEEEEecCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLL-KADA-TVTIVHSHT---------------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~-~~~a-tVtv~~~~t---------------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      .+++++|||.|.. |+..+..|. .++. +|+++++..                     .++++.+++|||||+||+.+.
T Consensus       128 ~~~~v~iiGaG~q-A~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~  206 (326)
T TIGR02992       128 DSSVVAIFGAGMQ-ARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSET  206 (326)
T ss_pred             CCcEEEEECCCHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCC
Confidence            5689999999996 999999887 4675 699997742                     134567889999999999877


Q ss_pred             C-CCCCCC
Q 027064          223 M-VTMGIL  229 (229)
Q Consensus       223 ~-i~~~~v  229 (229)
                      . |+.+|+
T Consensus       207 p~i~~~~l  214 (326)
T TIGR02992       207 PILHAEWL  214 (326)
T ss_pred             cEecHHHc
Confidence            6 466664

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=96.76  E-value=0.0041  Score=60.47  Aligned_cols=58  Identities=21%  Similarity=0.224  Sum_probs=49.9

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~  220 (229)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.+++..             .++.+.+++||+|+.+++-
T Consensus       133 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPl  203 (525)
T TIGR01327       133 GTELYGKTLGVIGLGRI-GSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELVDDLDELLARADFITVHTPL  203 (525)
T ss_pred             ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEcCCHHHHHhhCCEEEEccCC
Confidence            45789999999999996 9999999999999999987531             2578889999999998873

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.74  E-value=0.0024  Score=62.01  Aligned_cols=77  Identities=21%  Similarity=0.306  Sum_probs=58.3

Q ss_pred             HHHHHHHHHhCC----------CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------C---
Q 027064          152 KGCLELLKRSGV----------TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------D---  203 (229)
Q Consensus       152 ~av~~lL~~~~~----------~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~---  203 (229)
                      .|+++-...++.          .+.+.+|+|+|.|.+ |...+..+...||.|+++..+..               +   
T Consensus       139 ~Avi~Aa~~lgr~~~g~~taag~vp~akVlViGaG~i-Gl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e  217 (511)
T TIGR00561       139 RAIIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE  217 (511)
T ss_pred             HHHHHHHHHhhhhcCCceecCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccc
Confidence            677777776653          234689999999995 99999999999999998865321               0   


Q ss_pred             -----------------------HHhhhccCcEEEEec---C--CCCCCCCCCC
Q 027064          204 -----------------------PESIVREADIVIAAA---G--QAMMVTMGIL  229 (229)
Q Consensus       204 -----------------------l~~~~~~aDivisA~---g--~p~~i~~~~v  229 (229)
                                             +.+.++.+||||+++   |  .|.+++.+|+
T Consensus       218 ~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv  271 (511)
T TIGR00561       218 EGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMV  271 (511)
T ss_pred             cccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHH
Confidence                                   234578899999999   5  5667887663

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PLN02306 hydroxypyruvate reductase

Probab=96.73  E-value=0.0049  Score=57.85  Aligned_cols=56  Identities=20%  Similarity=0.302  Sum_probs=46.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHh-hCCCEEEEEcCC----------------------------CCCHHhhhccCcE
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLL-KADATVTIVHSH----------------------------TTDPESIVREADI  213 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~-~~~atVtv~~~~----------------------------t~~l~~~~~~aDi  213 (229)
                      .++.||++.|||.|.+ |+.+|.+|. .-|++|...++.                            ..++.+.+++||+
T Consensus       161 ~~L~gktvGIiG~G~I-G~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDi  239 (386)
T PLN02306        161 NLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADV  239 (386)
T ss_pred             cCCCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCE
Confidence            4689999999999996 999999985 789999877532                            1267888999999


Q ss_pred             EEEecC
Q 027064          214 VIAAAG  219 (229)
Q Consensus       214 visA~g  219 (229)
                      |+.+++
T Consensus       240 V~lh~P  245 (386)
T PLN02306        240 ISLHPV  245 (386)
T ss_pred             EEEeCC
Confidence            998765

>PTZ00317 NADP-dependent malic enzyme; Provisional

Probab=96.72  E-value=0.014  Score=57.21  Aligned_cols=130  Identities=19%  Similarity=0.187  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHh
Q 027064           82 EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS  161 (229)
Q Consensus        82 ~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~  161 (229)
                      .+||++.++++=  |+   .++|.=-...-+-.++++...  +++-.||          |+..+-.-++..|++.-++-.
T Consensus       229 ~defv~av~~~~--P~---~~Iq~EDf~~~naf~iL~kyr--~~i~~Fn----------DDiQGTaaV~lAgll~Alr~~  291 (559)
T PTZ00317        229 LDEFMEAVSSRW--PN---AVVQFEDFSNNHCFDLLERYQ--NKYRCFN----------DDIQGTGAVIAAGFLNALKLS  291 (559)
T ss_pred             HHHHHHHHHHhC--CC---eEEehhhcCCccHHHHHHHhc--cCCCEec----------ccchhHHHHHHHHHHHHHHHh
Confidence            367777777764  43   356554333333444444332  1222222          234555678889999999999


Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhh----CCC-------EEEEEcCCC-----------------------------
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADA-------TVTIVHSHT-----------------------------  201 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~----~~a-------tVtv~~~~t-----------------------------  201 (229)
                      +.+++.-++++.|+|.. |-.+|.+|..    .|.       .+++|+++-                             
T Consensus       292 g~~l~d~riv~~GAGsA-giGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~  370 (559)
T PTZ00317        292 GVPPEEQRIVFFGAGSA-AIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSL  370 (559)
T ss_pred             CCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccC
Confidence            99999999999999998 9999998874    576       688886631                             


Q ss_pred             CCHHhhhccC--cEEEEecCCCCCCCCCCC
Q 027064          202 TDPESIVREA--DIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 ~~l~~~~~~a--DivisA~g~p~~i~~~~v  229 (229)
                      .+|.+.++.+  |++|-++|.|+.+++|+|
T Consensus       371 ~~L~e~v~~~KPtvLIG~S~~~g~Ft~evv  400 (559)
T PTZ00317        371 KTLEDVVRFVKPTALLGLSGVGGVFTEEVV  400 (559)
T ss_pred             CCHHHHHhccCCCEEEEecCCCCCCCHHHH
Confidence            1466777888  999999999999998764

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=96.71  E-value=0.0027  Score=54.85  Aligned_cols=60  Identities=35%  Similarity=0.484  Sum_probs=46.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-CC-----------------HHhhhccCcEEEEecCCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-TD-----------------PESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~~-----------------l~~~~~~aDivisA~g~p~~  223 (229)
                      .+++||+|+|||.|. ||.-=+.+|++.||+|++..-.. +.                 ..+.+..+++||.||+.+.+
T Consensus         8 ~~l~~k~VlvvGgG~-va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~l   85 (210)
T COG1648           8 LDLEGKKVLVVGGGS-VALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEEL   85 (210)
T ss_pred             EEcCCCEEEEECCCH-HHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHH
Confidence            468999999999999 59999999999999998874432 11                 11445569999999987643

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.71  E-value=0.0017  Score=51.85  Aligned_cols=52  Identities=31%  Similarity=0.401  Sum_probs=40.1

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------CHHhhhccCcEEEEecC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~l~~~~~~aDivisA~g  219 (229)
                      --+|.|||+|. ||..|+..|.+.|..|.-+.+++.                ++.+.+++||++|-++.
T Consensus        10 ~l~I~iIGaGr-VG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavp   77 (127)
T PF10727_consen   10 RLKIGIIGAGR-VGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVP   77 (127)
T ss_dssp             --EEEEECTSC-CCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-
T ss_pred             ccEEEEECCCH-HHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEec
Confidence            35899999999 599999999999999988876542                34477899999999876

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.70  E-value=0.0039  Score=55.53  Aligned_cols=53  Identities=26%  Similarity=0.400  Sum_probs=43.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC--------------------------------------CCCHHhhhc
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH--------------------------------------TTDPESIVR  209 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~--------------------------------------t~~l~~~~~  209 (229)
                      ++|.|||.|.+ |.++|..|++.|..|++++..                                      +.++.+.++
T Consensus         2 ~~V~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~   80 (288)
T PRK09260          2 EKLVVVGAGVM-GRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA   80 (288)
T ss_pred             cEEEEECccHH-HHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence            58999999996 999999999999999998653                                      223446688


Q ss_pred             cCcEEEEecCCC
Q 027064          210 EADIVIAAAGQA  221 (229)
Q Consensus       210 ~aDivisA~g~p  221 (229)
                      +||+||.|++..
T Consensus        81 ~aD~Vi~avpe~   92 (288)
T PRK09260         81 DADLVIEAVPEK   92 (288)
T ss_pred             CCCEEEEeccCC
Confidence            999999998754

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.69  E-value=0.0041  Score=58.44  Aligned_cols=57  Identities=26%  Similarity=0.472  Sum_probs=45.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-CCHH--------------------hhhccCcEEEEecCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-TDPE--------------------SIVREADIVIAAAGQA  221 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~~l~--------------------~~~~~aDivisA~g~p  221 (229)
                      +++||+|+|+|.|. .|.++|..|+++|+.|+++++.. ..+.                    +....+|+||.++|.+
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~~   79 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGVP   79 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence            46899999999999 69999999999999999998753 2111                    1124689999999864

>PRK08291 ectoine utilization protein EutC; Validated

Probab=96.67  E-value=0.0053  Score=56.10  Aligned_cols=64  Identities=19%  Similarity=0.150  Sum_probs=48.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhh-CCC-EEEEEcCCC---------------------CCHHhhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLK-ADA-TVTIVHSHT---------------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~-~~a-tVtv~~~~t---------------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ...++++|||.|.. |+..+..|.. ++. .|+++++..                     .++.+.+++|||||+||+.+
T Consensus       130 ~~~~~v~IiGaG~~-a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~  208 (330)
T PRK08291        130 EDASRAAVIGAGEQ-ARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSE  208 (330)
T ss_pred             CCCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCC
Confidence            35689999999997 9998777774 554 788887641                     24557788999999999987


Q ss_pred             CC-CCCCCC
Q 027064          222 MM-VTMGIL  229 (229)
Q Consensus       222 ~~-i~~~~v  229 (229)
                      .. ++.+|+
T Consensus       209 ~p~i~~~~l  217 (330)
T PRK08291        209 EPILKAEWL  217 (330)
T ss_pred             CcEecHHHc
Confidence            66 455553

>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e

Probab=96.67  E-value=0.0016  Score=57.90  Aligned_cols=79  Identities=24%  Similarity=0.367  Sum_probs=62.9

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhC----CCE-------EEEEcCCC-----------------
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA----DAT-------VTIVHSHT-----------------  201 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~----~at-------Vtv~~~~t-----------------  201 (229)
                      |-.|++.-++-.+.+|+.-+++++|+|.. |-.++.+|...    |.+       +++++++-                 
T Consensus         8 ~lAgll~Al~~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a   86 (255)
T PF03949_consen    8 VLAGLLNALRVTGKKLSDQRIVFFGAGSA-GIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFA   86 (255)
T ss_dssp             HHHHHHHHHHHHTS-GGG-EEEEEB-SHH-HHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHcEEEEeCCChh-HHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhh
Confidence            45788999999999999999999999997 99999888765    773       88887741                 


Q ss_pred             ---------CCHHhhhccC--cEEEEecCCCCCCCCCCC
Q 027064          202 ---------TDPESIVREA--DIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 ---------~~l~~~~~~a--DivisA~g~p~~i~~~~v  229 (229)
                               .+|.+.++.+  |++|-.+|.|+.++.|||
T Consensus        87 ~~~~~~~~~~~L~eav~~~kPtvLIG~S~~~g~ft~evv  125 (255)
T PF03949_consen   87 RKTNPEKDWGSLLEAVKGAKPTVLIGLSGQGGAFTEEVV  125 (255)
T ss_dssp             BSSSTTT--SSHHHHHHCH--SEEEECSSSTTSS-HHHH
T ss_pred             ccCcccccccCHHHHHHhcCCCEEEEecCCCCcCCHHHH
Confidence                     1577889999  999999999999998764

g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=96.66  E-value=0.005  Score=59.85  Aligned_cols=58  Identities=17%  Similarity=0.205  Sum_probs=49.7

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CC-----------CHHhhhccCcEEEEecCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TT-----------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~-----------~l~~~~~~aDivisA~g~p  221 (229)
                      .++.||++.|||.|.+ |+.+|..|...|++|..+++. +.           ++.+.+++||+|+.+++..
T Consensus       136 ~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t  205 (526)
T PRK13581        136 VELYGKTLGIIGLGRI-GSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELVSLDELLARADFITLHTPLT  205 (526)
T ss_pred             cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEEcHHHHHhhCCEEEEccCCC
Confidence            4689999999999996 999999999999999988763 11           5678899999999998753

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=96.65  E-value=0.0046  Score=56.97  Aligned_cols=54  Identities=20%  Similarity=0.281  Sum_probs=45.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g  219 (229)
                      ++||+|.|||.|.+ |.+++..|...|..|.+..+..              .+..+.+++||+|+.+++
T Consensus        15 L~gktIgIIG~Gsm-G~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVP   82 (330)
T PRK05479         15 IKGKKVAIIGYGSQ-GHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLP   82 (330)
T ss_pred             hCCCEEEEEeeHHH-HHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCC
Confidence            67999999999996 9999999999999988865431              145577899999999986

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=96.65  E-value=0.0036  Score=54.69  Aligned_cols=59  Identities=10%  Similarity=0.238  Sum_probs=44.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CCCHH-----------------hhhccCcEEEEecCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TTDPE-----------------SIVREADIVIAAAGQAM  222 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~~l~-----------------~~~~~aDivisA~g~p~  222 (229)
                      ++++|++|+|||.|.+ +.-=+..|++.||.||++... ++.+.                 +.+..+++||.||+-|.
T Consensus        21 l~~~~~~VLVVGGG~V-A~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~   97 (223)
T PRK05562         21 LLSNKIKVLIIGGGKA-AFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEK   97 (223)
T ss_pred             EECCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHH
Confidence            4567999999999995 777777888899999998443 32221                 33678899999998653

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2

Probab=96.63  E-value=0.0057  Score=54.39  Aligned_cols=56  Identities=27%  Similarity=0.312  Sum_probs=46.6

Q ss_pred             CCcccCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcCC
Q 027064          144 PLFLPCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHSH  200 (229)
Q Consensus       144 ~~~~PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~~  200 (229)
                      .+--+.|.+|++..++.    .+.+++|++|+|-|.|+ ||..++.+|.+.|++|+ +++++
T Consensus        11 ~gR~~aTg~Gv~~~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~e~GakvvaVsD~~   71 (254)
T cd05313          11 LIRPEATGYGLVYFVEEMLKDRNETLKGKRVAISGSGN-VAQYAAEKLLELGAKVVTLSDSK   71 (254)
T ss_pred             CCCCchhHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCC
Confidence            34458898888776654    57889999999999999 59999999999999876 88753

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t

>PRK09414 glutamate dehydrogenase; Provisional

Probab=96.63  E-value=0.019  Score=54.89  Aligned_cols=53  Identities=26%  Similarity=0.263  Sum_probs=44.4

Q ss_pred             cccCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE-cC
Q 027064          146 FLPCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV-HS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~-~~  199 (229)
                      --+.|.+|+...++.    .+.+++|++|+|.|.|+ ||.-+|.+|.+.|++|+.+ ++
T Consensus       207 r~~aTg~Gv~~~~~~~~~~~~~~l~g~rVaIqGfGn-VG~~~A~~L~~~GakVVavsDs  264 (445)
T PRK09414        207 RTEATGYGLVYFAEEMLKARGDSFEGKRVVVSGSGN-VAIYAIEKAQQLGAKVVTCSDS  264 (445)
T ss_pred             CCCcccHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEcC
Confidence            457898888776665    47889999999999999 5999999999999987765 53

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.62  E-value=0.0033  Score=50.68  Aligned_cols=54  Identities=22%  Similarity=0.440  Sum_probs=43.3

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEecCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      ||+|||+++.||..++.+|..++.  .+.+++....                        +..+.+++|||||.+.|.|.
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~~   81 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVPR   81 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTSS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEeccccc
Confidence            799999955589999999998876  5777766421                        33467999999999999874

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.54  E-value=0.015  Score=52.67  Aligned_cols=60  Identities=15%  Similarity=0.103  Sum_probs=48.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhh-CCC-EEEEEcCCC-------------------CCHHhhhccCcEEEEecCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLK-ADA-TVTIVHSHT-------------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~-~~a-tVtv~~~~t-------------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      +...++++|||.|.. |+..+..|.. ++. .|.++++.-                   .+..+.+++|||||+||+.++
T Consensus       122 ~~~~~~v~IiGaG~q-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~~  200 (304)
T PRK07340        122 PAPPGDLLLIGTGVQ-ARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSRT  200 (304)
T ss_pred             CCCCCEEEEECCcHH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCCC
Confidence            346799999999996 9999999864 565 688887631                   145567889999999999998


Q ss_pred             CC
Q 027064          223 MV  224 (229)
Q Consensus       223 ~i  224 (229)
                      .+
T Consensus       201 Pl  202 (304)
T PRK07340        201 PV  202 (304)
T ss_pred             ce
Confidence            85

>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional

Probab=96.51  E-value=0.38  Score=43.86  Aligned_cols=152  Identities=16%  Similarity=0.193  Sum_probs=99.7

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF  129 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~  129 (229)
                      +|..---+=..++.++|..+..+.-.+.  ...|-+.+.++-|+.= ++|+|.+--|  .+-...++.+.       -.+
T Consensus        55 pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y-~~D~iv~R~~--~~~~~~~~a~~-------~~v  124 (305)
T PRK00856         55 PSTRTRLSFELAAKRLGADVINFSASTSSVSKGETLADTIRTLSAM-GADAIVIRHP--QSGAARLLAES-------SDV  124 (305)
T ss_pred             CCcchHHHHHHHHHHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhc-CCCEEEEeCC--ChHHHHHHHHH-------CCC
Confidence            4666666778899999999877643211  1114455555555432 2679999866  33222333332       123


Q ss_pred             CccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcCC-------
Q 027064          130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHSH-------  200 (229)
Q Consensus       130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~~-------  200 (229)
                      --+|.|-      .....||=+.+=+--+.+.-..++|++|++||-.  +-|.+.++.++..-|++|++|+-.       
T Consensus       125 PVINa~~------g~~~HPtQ~LaDl~Ti~e~~G~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~~~~~~  198 (305)
T PRK00856        125 PVINAGD------GSHQHPTQALLDLLTIREEFGRLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTLLPEGM  198 (305)
T ss_pred             CEEECCC------CCCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCcccCcccc
Confidence            4455431      1346799887765555544347999999999986  457999999999999999998643       


Q ss_pred             -----CCCHHhhhccCcEEEEecC
Q 027064          201 -----TTDPESIVREADIVIAAAG  219 (229)
Q Consensus       201 -----t~~l~~~~~~aDivisA~g  219 (229)
                           +.++.+.++.||+|.+-..
T Consensus       199 ~~~~~~~d~~ea~~~aDvvyt~~~  222 (305)
T PRK00856        199 PEYGVHTDLDEVIEDADVVMMLRV  222 (305)
T ss_pred             cceEEECCHHHHhCCCCEEEECCc
Confidence                 2356788999999988553

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.50  E-value=0.0097  Score=54.28  Aligned_cols=62  Identities=18%  Similarity=0.236  Sum_probs=47.5

Q ss_pred             CCCeEEEEccchhhhHHHHHHHh-hCCC-EEEEEcCCC---------------------CCHHhhhccCcEEEEecCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLL-KADA-TVTIVHSHT---------------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~-~~~a-tVtv~~~~t---------------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      ..++++|||.|.. |+..+..|. .+++ .|.++++..                     .++++.+++||+||+||+.++
T Consensus       126 ~~~~v~iiGaG~~-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~  204 (325)
T PRK08618        126 DAKTLCLIGTGGQ-AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKT  204 (325)
T ss_pred             CCcEEEEECCcHH-HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCC
Confidence            5789999999996 988876664 4566 688887631                     135567889999999999988


Q ss_pred             CC-CCCCC
Q 027064          223 MV-TMGIL  229 (229)
Q Consensus       223 ~i-~~~~v  229 (229)
                      .+ . +|+
T Consensus       205 p~i~-~~l  211 (325)
T PRK08618        205 PVFS-EKL  211 (325)
T ss_pred             cchH-Hhc
Confidence            74 6 664

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.50  E-value=0.0079  Score=52.10  Aligned_cols=49  Identities=18%  Similarity=0.266  Sum_probs=40.0

Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC
Q 027064          152 KGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT  201 (229)
Q Consensus       152 ~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t  201 (229)
                      .++.+.+++.+.+++|++|+|.|-|+ ||+.++.+|.++|+ .|.++++..
T Consensus         8 ~~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~~~G~~vV~vsD~~g   57 (217)
T cd05211           8 VAMKAAMKHLGDSLEGLTVAVQGLGN-VGWGLAKKLAEEGGKVLAVSDPDG   57 (217)
T ss_pred             HHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEEcCCC
Confidence            34445566677889999999999999 59999999999988 577787654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.50  E-value=0.0068  Score=54.74  Aligned_cols=55  Identities=24%  Similarity=0.429  Sum_probs=43.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-------CH-----------------HhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-------DP-----------------ESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-------~l-----------------~~~~~~aDivisA~g~p  221 (229)
                      ++|+|||.|. ||..++..|+.+|.  .++++++...       ++                 .+.++.||+||.++|.|
T Consensus         1 ~kI~IIGaG~-vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~   79 (306)
T cd05291           1 RKVVIIGAGH-VGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP   79 (306)
T ss_pred             CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence            4899999988 59999999999984  6888876321       11                 14478999999999987


Q ss_pred             CC
Q 027064          222 MM  223 (229)
Q Consensus       222 ~~  223 (229)
                      .-
T Consensus        80 ~~   81 (306)
T cd05291          80 QK   81 (306)
T ss_pred             CC
Confidence            43

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK03515 ornithine carbamoyltransferase subunit I; Provisional

Probab=96.49  E-value=0.23  Score=45.91  Aligned_cols=155  Identities=14%  Similarity=0.057  Sum_probs=102.8

Q ss_pred             EEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhc
Q 027064           42 LAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGE  119 (229)
Q Consensus        42 LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~  119 (229)
                      ++.+..-   .|..---+=..++.++|..+.++.-...  ...|.+.+.++-|+.-  +|+|.+-.|  .+-..+++.+.
T Consensus        48 l~~lF~e---pSTRTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~--~~~~~~~~a~~  120 (336)
T PRK03515         48 IALIFEK---DSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM--YDGIQYRGY--GQEIVETLAEY  120 (336)
T ss_pred             EEEEecC---CChhHHHHHHHHHHHcCCcEEEeCCccccCCCCCCHHHHHHHHHHh--CcEEEEEeC--ChHHHHHHHHh
Confidence            5554432   4666666777889999999888642210  1126677777777655  789999866  33333344333


Q ss_pred             CCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHH-hC-CCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEE
Q 027064          120 ISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SG-VTIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTI  196 (229)
Q Consensus       120 I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~-~~-~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv  196 (229)
                      .    .   +--+|.+       .....||=+.+=+--+++ .+ .+++|++++.||-. ..|.+.+..++...|+.+++
T Consensus       121 ~----~---vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~  186 (336)
T PRK03515        121 A----G---VPVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRL  186 (336)
T ss_pred             C----C---CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEE
Confidence            2    1   3334532       234679988776655544 44 36999999999975 34799999999999999999


Q ss_pred             EcCCC-------------------------CCHHhhhccCcEEEEe
Q 027064          197 VHSHT-------------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       197 ~~~~t-------------------------~~l~~~~~~aDivisA  217 (229)
                      |+-..                         .++.+.++.||+|.+-
T Consensus       187 ~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd  232 (336)
T PRK03515        187 VAPKACWPEAALVTECRALAQKNGGNITLTEDIAEGVKGADFIYTD  232 (336)
T ss_pred             ECCchhcCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence            85432                         2455778999999874

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.46  E-value=0.0068  Score=56.42  Aligned_cols=54  Identities=22%  Similarity=0.338  Sum_probs=45.6

Q ss_pred             CCeEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCC-CCHHhhhccCcEEEEecCCC
Q 027064          167 GKRAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHT-TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t-~~l~~~~~~aDivisA~g~p  221 (229)
                      .++|+||| .|. +|.+++..|.++|..|+++++.. .+..+.+++||+||.|++..
T Consensus        98 ~~~I~IiGG~Gl-mG~slA~~l~~~G~~V~~~d~~~~~~~~~~~~~aDlVilavP~~  153 (374)
T PRK11199         98 LRPVVIVGGKGQ-LGRLFAKMLTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIH  153 (374)
T ss_pred             cceEEEEcCCCh-hhHHHHHHHHHCCCeEEEeCCCcchhHHHHHhcCCEEEEeCcHH
Confidence            48999999 666 59999999999999999998754 35667789999999998743

>PLN02477 glutamate dehydrogenase

Probab=96.40  E-value=0.0083  Score=56.80  Aligned_cols=54  Identities=20%  Similarity=0.263  Sum_probs=45.4

Q ss_pred             cccCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcCC
Q 027064          146 FLPCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHSH  200 (229)
Q Consensus       146 ~~PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~~  200 (229)
                      --+.|++|+...++    +++.+++|++|+|.|.|+ ||+.++.+|.++|++|+ ++++.
T Consensus       181 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaIqGfGn-VG~~~A~~L~e~GakVVaVsD~~  239 (410)
T PLN02477        181 REAATGRGVVFATEALLAEHGKSIAGQTFVIQGFGN-VGSWAAQLIHEKGGKIVAVSDIT  239 (410)
T ss_pred             CCccchHHHHHHHHHHHHHcCCCccCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEECCC
Confidence            34678888776655    467899999999999999 59999999999999877 77775

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=96.39  E-value=0.0091  Score=54.55  Aligned_cols=54  Identities=20%  Similarity=0.319  Sum_probs=43.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CC-------------CHHhhhccCcEEEEecC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TT-------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~-------------~l~~~~~~aDivisA~g  219 (229)
                      ++||+|.|||.|.+ |.+++..|.+.|..|++..+. ..             +..+.+++||+|+.++.
T Consensus         1 l~~kkIgiIG~G~m-G~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVp   68 (314)
T TIGR00465         1 LKGKTVAIIGYGSQ-GHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLP   68 (314)
T ss_pred             CCcCEEEEEeEcHH-HHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCC
Confidence            57999999999996 999999999999887765332 11             34466889999999987

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.38  E-value=0.0058  Score=45.06  Aligned_cols=51  Identities=31%  Similarity=0.431  Sum_probs=39.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCC---CEEEEE-cCCCC----------------CHHhhhccCcEEEEecCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKAD---ATVTIV-HSHTT----------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~---atVtv~-~~~t~----------------~l~~~~~~aDivisA~g~  220 (229)
                      ++.+||.|.+ |..++.-|.+.|   .+|+++ +++..                +..+.+++||+||.|+.-
T Consensus         1 kI~iIG~G~m-g~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p   71 (96)
T PF03807_consen    1 KIGIIGAGNM-GSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKP   71 (96)
T ss_dssp             EEEEESTSHH-HHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-G
T ss_pred             CEEEECCCHH-HHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECH
Confidence            5889999996 999999999999   899965 55321                355778899999998753

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.37  E-value=0.011  Score=54.19  Aligned_cols=56  Identities=21%  Similarity=0.306  Sum_probs=48.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g  219 (229)
                      .++.||++-|||.|.+ |+.+|+.|..-|+.|...+++..            ++.+.+++||+|+...+
T Consensus       142 ~~l~gktvGIiG~GrI-G~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~P  209 (324)
T COG1052         142 FDLRGKTLGIIGLGRI-GQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCP  209 (324)
T ss_pred             cCCCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCC
Confidence            4789999999999996 99999999988999988876531            47789999999988765

>PRK14030 glutamate dehydrogenase; Provisional

Probab=96.37  E-value=0.04  Score=52.77  Aligned_cols=50  Identities=26%  Similarity=0.292  Sum_probs=42.3

Q ss_pred             cccCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEE
Q 027064          146 FLPCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTI  196 (229)
Q Consensus       146 ~~PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv  196 (229)
                      --+.|.+|++..++    +.+.+++|++|+|=|.|+ ||..+|.+|.+.||+|+.
T Consensus       203 r~~ATg~Gv~~~~~~~~~~~g~~l~g~~vaIQGfGn-VG~~aA~~L~e~GakvVa  256 (445)
T PRK14030        203 RPEATGFGALYFVHQMLETKGIDIKGKTVAISGFGN-VAWGAATKATELGAKVVT  256 (445)
T ss_pred             CCCccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEE
Confidence            34579988876554    567899999999999999 599999999999998766

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.35  E-value=0.0086  Score=53.29  Aligned_cols=52  Identities=17%  Similarity=0.329  Sum_probs=43.8

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      +|.|||.|.+ |.+++..|.+.|..|+++++..              .+..+.++++|+||.+++.+
T Consensus         1 ~IgvIG~G~m-G~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~   66 (291)
T TIGR01505         1 KVGFIGLGIM-GSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDS   66 (291)
T ss_pred             CEEEEEecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCH
Confidence            4789999996 9999999999999999998752              24557789999999998753

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.32  E-value=0.0042  Score=52.42  Aligned_cols=54  Identities=26%  Similarity=0.380  Sum_probs=36.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------------------------CHHhhhccCcE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------------------------DPESIVREADI  213 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------------------------~l~~~~~~aDi  213 (229)
                      ++|+|||-|- ||.|+|..|++.|.+|+.++....                                  +..+.+++||+
T Consensus         1 M~I~ViGlGy-vGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv   79 (185)
T PF03721_consen    1 MKIAVIGLGY-VGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV   79 (185)
T ss_dssp             -EEEEE--ST-THHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred             CEEEEECCCc-chHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence            4899999999 599999999999999999955321                                  23355889999


Q ss_pred             EEEecCCCC
Q 027064          214 VIAAAGQAM  222 (229)
Q Consensus       214 visA~g~p~  222 (229)
                      +|.++|-|-
T Consensus        80 ~~I~VpTP~   88 (185)
T PF03721_consen   80 VFICVPTPS   88 (185)
T ss_dssp             EEE----EB
T ss_pred             EEEecCCCc
Confidence            999998763

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK06398 aldose dehydrogenase; Validated

Probab=96.32  E-value=0.012  Score=50.87  Aligned_cols=59  Identities=25%  Similarity=0.253  Sum_probs=45.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------C------HHhhh-------ccCcEEEEecCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------D------PESIV-------READIVIAAAGQ  220 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~------l~~~~-------~~aDivisA~g~  220 (229)
                      +++||+++|.|.+.-+|+.++..|.++|++|+++.+...          |      +.+.+       ..-|++|...|.
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~   82 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGI   82 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            478999999999999999999999999999988755321          1      11112       246999999886


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      +.
T Consensus        83 ~~   84 (258)
T PRK06398         83 ES   84 (258)
T ss_pred             CC
Confidence            43

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.31  E-value=0.011  Score=51.23  Aligned_cols=54  Identities=30%  Similarity=0.318  Sum_probs=45.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------CHHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------~l~~~~~~aDivisA~g~p~  222 (229)
                      +.+.|+|+|++ |..++..|...|.+|++-+|+.+                 ...+..+.|||||.|++-+.
T Consensus         2 ~~~~i~GtGni-G~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a   72 (211)
T COG2085           2 MIIAIIGTGNI-GSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEA   72 (211)
T ss_pred             cEEEEeccChH-HHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHH
Confidence            57899999996 99999999999999999977654                 23467888999999987443

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.30  E-value=0.01  Score=52.90  Aligned_cols=52  Identities=31%  Similarity=0.366  Sum_probs=43.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC---------------------------------------CCCHHhhh
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH---------------------------------------TTDPESIV  208 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~---------------------------------------t~~l~~~~  208 (229)
                      ++|.|||.|.+ |..+|..|++.|..|++++..                                       |.++.+.+
T Consensus         4 ~kIaViGaG~m-G~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~   82 (287)
T PRK08293          4 KNVTVAGAGVL-GSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV   82 (287)
T ss_pred             cEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence            58999999996 999999999999999998542                                       23455667


Q ss_pred             ccCcEEEEecCC
Q 027064          209 READIVIAAAGQ  220 (229)
Q Consensus       209 ~~aDivisA~g~  220 (229)
                      +.||+||.|+..
T Consensus        83 ~~aDlVieavpe   94 (287)
T PRK08293         83 KDADLVIEAVPE   94 (287)
T ss_pred             cCCCEEEEeccC
Confidence            899999999873

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.27  E-value=0.0055  Score=59.53  Aligned_cols=48  Identities=17%  Similarity=0.177  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHhCC----------CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          151 PKGCLELLKRSGV----------TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       151 a~av~~lL~~~~~----------~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ..|+++-.++++.          ...|.+|+|+|.|.+ |...+..+...||.|++++.
T Consensus       139 y~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGaG~i-GL~Ai~~Ak~lGA~V~a~D~  196 (509)
T PRK09424        139 YRAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAAGSLGAIVRAFDT  196 (509)
T ss_pred             HHHHHHHHHHhcccCCCceeccCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEeC
Confidence            3778877777653          346899999999995 99999999999998887755

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.26  E-value=0.0085  Score=48.74  Aligned_cols=52  Identities=29%  Similarity=0.414  Sum_probs=42.6

Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------------CHHhhhccCcEEEEecCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------------~l~~~~~~aDivisA~g~p  221 (229)
                      |+|+|+++.+|+.++..|+++|+.|+..-|...                   .+.+.++.+|.||.+.|.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhhh
Confidence            789999888999999999999999988755422                   1346678899999998854

...

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.011  Score=51.09  Aligned_cols=37  Identities=27%  Similarity=0.384  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++|+.++|.|++..+|+.++..|+++|++|+++.+.
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~   38 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRN   38 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence            3578999999999999999999999999999988653

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.17  E-value=0.025  Score=53.23  Aligned_cols=77  Identities=23%  Similarity=0.351  Sum_probs=58.5

Q ss_pred             cCCHHHHHHHHHHhC---CCCCCCeEEEEccc----------------hhhhHHHHHHHhhCCCEEEEEcCCCC------
Q 027064          148 PCTPKGCLELLKRSG---VTIKGKRAVVVGRS----------------NIVGLPVSLLLLKADATVTIVHSHTT------  202 (229)
Q Consensus       148 PcTa~av~~lL~~~~---~~l~gk~v~ViG~s----------------~~VG~pla~~L~~~~atVtv~~~~t~------  202 (229)
                      ++++.-++..+.+.-   -+++||+|+|-|.+                +-.|..+|..|..+||+|+++++...      
T Consensus       163 ~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~  242 (390)
T TIGR00521       163 LAEPETIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPG  242 (390)
T ss_pred             CCCHHHHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCC
Confidence            778888877777542   46899999999983                34699999999999999999876421      


Q ss_pred             ----------CH-H----hhhccCcEEEEecCCCCCC
Q 027064          203 ----------DP-E----SIVREADIVIAAAGQAMMV  224 (229)
Q Consensus       203 ----------~l-~----~~~~~aDivisA~g~p~~i  224 (229)
                                ++ .    +...+.|++|.+.|...|-
T Consensus       243 ~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~  279 (390)
T TIGR00521       243 VKSIKVSTAEEMLEAALNELAKDFDIFISAAAVADFK  279 (390)
T ss_pred             cEEEEeccHHHHHHHHHHhhcccCCEEEEcccccccc
Confidence                      12 1    2234689999999988774

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated

Probab=96.17  E-value=0.99  Score=42.70  Aligned_cols=167  Identities=18%  Similarity=0.202  Sum_probs=103.1

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCC---CCCCCHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPL---PKHINEEK  115 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Pl---p~~i~~~~  115 (229)
                      ++++..+-+  .|..---+=.-++.++|..+.++.-..+  ...|-+.+.++-|+.-  +|+|.+-.|-   ..+-..++
T Consensus        60 ~~~~~lF~e--pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviR~~~~~g~~~~~~~e  135 (395)
T PRK07200         60 GLGISVFRD--NSTRTRFSYASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFM--ADVIGIRDDMYIGKGNAYMRE  135 (395)
T ss_pred             CeEEEEEcC--CCchhHHHHHHHHHHcCCCEEEcCCccccCCCCCCHHHHHHHHHHh--CCEEEEecCcccccccHHHHH
Confidence            444333332  5666666778899999999888753221  0115566666666655  7899998774   22222233


Q ss_pred             HHhcCCc--cCcc-cccCc-cchhhhhccCCCCCcccCCHHHHHHHH-HHhCC--CCCCCeEEEEc-------cchhhhH
Q 027064          116 VLGEISL--EKDV-DGFHP-LNIGKLAMKGRDPLFLPCTPKGCLELL-KRSGV--TIKGKRAVVVG-------RSNIVGL  181 (229)
Q Consensus       116 i~~~I~p--~KDV-Dg~~~-~N~g~l~~~~~~~~~~PcTa~av~~lL-~~~~~--~l~gk~v~ViG-------~s~~VG~  181 (229)
                      +.+...-  .++| ...-| +|.+    +   ....||=+.+=+--+ |+.|.  .++|++|+++|       ++..|.+
T Consensus       136 la~~~~~~~~~~~~~~~pPVINa~----~---~~~HPtQaLaDl~TI~E~~G~~~~l~g~kVaivg~~~~~~g~~~~Va~  208 (395)
T PRK07200        136 VGAAVDDGYKQGVLPQRPTLVNLQ----C---DIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQ  208 (395)
T ss_pred             HHHHhhhhcccccccCCCeEEECC----C---CCCCcHHHHHHHHHHHHHhCCCcccCCCEEEEEeccccccCCcchHHH
Confidence            3222210  0111 11222 5652    2   246699887765544 45553  28999999985       4557789


Q ss_pred             HHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          182 PVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       182 pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      .++.+|..-|++|++|+-..                         .|+.+.++.||+|.+-+
T Consensus       209 Sl~~~~~~lG~~v~~~~P~~~~~~~~i~~~a~~~~~~~G~~i~~~~d~~eav~~aDvVYtd~  270 (395)
T PRK07200        209 GIIGLMTRFGMDVTLAHPEGYDLMPEVVEVAKKNAKASGGSFRQVNSMEEAFKDADIVYPKS  270 (395)
T ss_pred             HHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence            99999999999999986432                         25567889999998763

>PRK04523 N-acetylornithine carbamoyltransferase; Reviewed

Probab=96.14  E-value=0.41  Score=44.19  Aligned_cols=191  Identities=16%  Similarity=0.138  Sum_probs=114.6

Q ss_pred             hcccHHHHHHHHHHHHHHHHHHHhcC----CCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC-------
Q 027064           11 IIDGKAVAQTIRSEIAEEVRLLSEKY----GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ-------   79 (229)
Q Consensus        11 il~G~~la~~i~~~i~~~~~~l~~~~----~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~-------   79 (229)
                      +|+-+.+.++=.+.+-+....++...    -....++.+..   ..|..---+=..++.++|-.+..+.-...       
T Consensus         6 ll~i~dl~~~ei~~ll~~A~~~k~~~~~~~L~gk~l~~lF~---epSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~~e~~   82 (335)
T PRK04523          6 FLNTQDWSRAELDALLTQAAAFKRNKLGSALKGKSIALVFF---NPSLRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFE   82 (335)
T ss_pred             cCchhhCCHHHHHHHHHHHHHHHhcccCccCCCCEEEEEEc---CCCchhHHHHHHHHHHcCCeEEEeCcccccchhhcc
Confidence            44545555444444545455554321    01124555443   34655556677889999999887754322       


Q ss_pred             -------CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCC-----HHHHHhcCCccCcccccCccchhhhhccCCCCCcc
Q 027064           80 -------VSEAELISKVHELNVMPDVHGILVQLPLPKHIN-----EEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFL  147 (229)
Q Consensus        80 -------~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~-----~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~  147 (229)
                             ...|.+.+.++-|+.-  +|+|.+-.|-. +.+     +...++.+...-+   +--+|.|       .. +.
T Consensus        83 ~g~~~~~~kgEsl~Dtarvls~~--~D~iv~R~~~~-g~~~~~~~~~~~~~~~a~~s~---vPVINa~-------~~-~H  148 (335)
T PRK04523         83 LGAVMDGETEEHIREVARVLSRY--VDLIGVRAFPK-FVDWSKDRQDQVLNSFAKYST---VPVINME-------TI-TH  148 (335)
T ss_pred             cccccCCCCCcCHHHHHHHHHHh--CcEEEEeCCcc-ccccccchhHHHHHHHHHhCC---CCEEECC-------CC-CC
Confidence                   1235666666666655  78999986522 111     0112222222112   3344542       23 77


Q ss_pred             cCCHHHHHHHHHHhCCCC-CCCeEEEEccc------hhhhHHHHHHHhhCCCEEEEEcC-CC------------------
Q 027064          148 PCTPKGCLELLKRSGVTI-KGKRAVVVGRS------NIVGLPVSLLLLKADATVTIVHS-HT------------------  201 (229)
Q Consensus       148 PcTa~av~~lL~~~~~~l-~gk~v~ViG~s------~~VG~pla~~L~~~~atVtv~~~-~t------------------  201 (229)
                      ||=+.+=+--+++.-.++ +|++++|++.|      ..|.+.++.+|..-|++|++|+- ..                  
T Consensus       149 PtQaLaDl~Ti~e~~g~~~~g~ki~i~~~gd~~~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~  228 (335)
T PRK04523        149 PCQELAHALALQEHFGTTLRGKKYVLTWTYHPKPLNTAVANSALLIATRLGMDVTLLCPTPDYILDERYMDWAEQNAAES  228 (335)
T ss_pred             hHHHHHHHHHHHHHhCCccCCCEEEEEEeccCcccccHHHHHHHHHHHHcCCEEEEECCchhhCCCHHHHHHHHHHHHHc
Confidence            998888777776554568 89999886532      24688999999999999999876 22                  


Q ss_pred             -------CCHHhhhccCcEEEEec
Q 027064          202 -------TDPESIVREADIVIAAA  218 (229)
Q Consensus       202 -------~~l~~~~~~aDivisA~  218 (229)
                             .++.+.++.||+|..-.
T Consensus       229 g~~~~~~~d~~ea~~~aDvvy~~~  252 (335)
T PRK04523        229 GGSLTVSHDIDSAYAGADVVYAKS  252 (335)
T ss_pred             CCeEEEEcCHHHHhCCCCEEEece
Confidence                   24567799999998754

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.013  Score=50.07  Aligned_cols=38  Identities=29%  Similarity=0.449  Sum_probs=34.0

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++.||+++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~   42 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRR   42 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45789999999999989999999999999999988653

>PRK10637 cysG siroheme synthase; Provisional

Probab=96.13  E-value=0.0082  Score=57.36  Aligned_cols=59  Identities=20%  Similarity=0.284  Sum_probs=45.5

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CCCHH-----------------hhhccCcEEEEecCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TTDPE-----------------SIVREADIVIAAAGQAM  222 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~~l~-----------------~~~~~aDivisA~g~p~  222 (229)
                      ++++||+|+|||.|.+ +.-=+..|++.||.||++-.. ++++.                 +.+..+++||.||+-+.
T Consensus         8 ~~l~~~~vlvvGgG~v-A~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~   84 (457)
T PRK10637          8 CQLRDRDCLLVGGGDV-AERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDA   84 (457)
T ss_pred             EEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHH
Confidence            5789999999999995 777677888899999998432 22221                 34678999999998654

>PRK08192 aspartate carbamoyltransferase; Provisional

Probab=96.13  E-value=0.59  Score=43.24  Aligned_cols=151  Identities=17%  Similarity=0.071  Sum_probs=95.9

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG  128 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg  128 (229)
                      .|..---+=..++.++|..+.++.=+.+.   ..|-+.+.++-|+.=  +|+|++--|  .+-...++.+..       .
T Consensus        54 pSTRTR~SFe~A~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y--~D~IviR~~--~~~~~~~~a~~~-------~  122 (338)
T PRK08192         54 PSTRTRVSFGCAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTY--SDVIAMRHP--DAGSVKEFAEGS-------R  122 (338)
T ss_pred             CCcchHHHHHHHHHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHc--CCEEEEeCC--chhHHHHHHHhC-------C
Confidence            45555556778899999998764212221   125566666666555  789999865  333223333321       1


Q ss_pred             cCccchhhhhccCCCCCcccCCHHHHHHHHHHh----CCCCCCCeEEEEccc--hhhhHHHHHHHhhC-CCEEEEEcCCC
Q 027064          129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS----GVTIKGKRAVVVGRS--NIVGLPVSLLLLKA-DATVTIVHSHT  201 (229)
Q Consensus       129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~----~~~l~gk~v~ViG~s--~~VG~pla~~L~~~-~atVtv~~~~t  201 (229)
                      +--+|.|-      .....||=+.+=+--+++.    |.+++|++|++||-+  +-|...++..|... |+.|++|+-..
T Consensus       123 vPVINa~~------g~~~HPtQaLaDl~Ti~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~  196 (338)
T PRK08192        123 VPVINGGD------GSNEHPTQALLDLFTIQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKE  196 (338)
T ss_pred             CCEEECCC------CCCCCcHHHHHHHHHHHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCcc
Confidence            33455431      1356799888866666543    347899999999996  44678877766644 88988885432


Q ss_pred             ---------------------CCHHhhhccCcEEEEecC
Q 027064          202 ---------------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       202 ---------------------~~l~~~~~~aDivisA~g  219 (229)
                                           .|+.+.++.||+|.+-.+
T Consensus       197 ~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~~  235 (338)
T PRK08192        197 LAMPDYVISDIENAGHKITITDQLEGNLDKADILYLTRI  235 (338)
T ss_pred             ccCCHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEEcCc
Confidence                                 356688999999998543

>PRK11891 aspartate carbamoyltransferase; Provisional

Probab=96.12  E-value=0.55  Score=44.87  Aligned_cols=151  Identities=17%  Similarity=0.102  Sum_probs=98.4

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCCCC---HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQVS---EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG  128 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~---~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg  128 (229)
                      .|..---+=..++.++|..+.++.-+.+.+   .|-+.+..+-|+.=  +|+|++-.|  .+-...++.+..       .
T Consensus       136 pSTRTR~SFE~A~~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y--~D~IviR~~--~~~~~~e~A~~s-------~  204 (429)
T PRK11891        136 ASTRTRVSFGAAFCRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGY--VDALVIRHP--EQGSVAEFARAT-------N  204 (429)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHh--CCEEEEeCC--chhHHHHHHHhC-------C
Confidence            365555677788999999988774222111   24455555555544  788988865  333334443332       1


Q ss_pred             cCccchhhhhccCCCCCcccCCHHHHHHHHH-HhC--C-CCCCCeEEEEccc--hhhhHHHHHHHhhC-CCEEEEEcCCC
Q 027064          129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLK-RSG--V-TIKGKRAVVVGRS--NIVGLPVSLLLLKA-DATVTIVHSHT  201 (229)
Q Consensus       129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~-~~~--~-~l~gk~v~ViG~s--~~VG~pla~~L~~~-~atVtv~~~~t  201 (229)
                      +--+|.|     + ...+.||=+.+=+--++ +.+  . .++|++|++||-.  +-|...++.+|... |+.|++|.-..
T Consensus       205 vPVINAg-----d-g~~~HPtQaLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~  278 (429)
T PRK11891        205 LPVINGG-----D-GPGEHPSQALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPT  278 (429)
T ss_pred             CCEEECC-----C-CCCCCcHHHHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCc
Confidence            3445543     1 14567998877655554 443  2 4899999999996  45689998888775 99999885432


Q ss_pred             ---------------------CCHHhhhccCcEEEEecC
Q 027064          202 ---------------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       202 ---------------------~~l~~~~~~aDivisA~g  219 (229)
                                           .|+.+.++.||+|.+..+
T Consensus       279 ~~~~~~~~~~~~~~G~~v~~~~d~~eav~~ADVVYt~~~  317 (429)
T PRK11891        279 LEMPAYIVEQISRNGHVIEQTDDLAAGLRGADVVYATRI  317 (429)
T ss_pred             cccCHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcCc
Confidence                                 356688999999998554

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.10  E-value=0.016  Score=51.96  Aligned_cols=54  Identities=19%  Similarity=0.315  Sum_probs=44.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      ++|.|||.|.+ |.+++..|++.|..|+++++..              .+..+..+++|+||.++..+.
T Consensus         2 ~~Ig~IGlG~m-G~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~   69 (296)
T PRK15461          2 AAIAFIGLGQM-GSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGD   69 (296)
T ss_pred             CeEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHH
Confidence            37999999996 9999999999999999997742              245567889999999987653

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.10  E-value=0.015  Score=55.24  Aligned_cols=56  Identities=23%  Similarity=0.332  Sum_probs=43.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------CH-------------HhhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------DP-------------ESIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------~l-------------~~~~~~aDivisA~g~p  221 (229)
                      +.||+|.|+|.|.. |++++.+|.++|++|++++....        .+             .+.+..+|.||...|.|
T Consensus        12 ~~~~~i~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi~   88 (458)
T PRK01710         12 IKNKKVAVVGIGVS-NIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSMR   88 (458)
T ss_pred             hcCCeEEEEcccHH-HHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCCC
Confidence            46899999999997 99999999999999999986421        11             12346789888876654

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.08  E-value=0.013  Score=52.65  Aligned_cols=53  Identities=19%  Similarity=0.354  Sum_probs=42.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------------------------CCHHhhhccCcEE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------------------------TDPESIVREADIV  214 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------------------------~~l~~~~~~aDiv  214 (229)
                      ++|.|||.|.+ |.+++..|++.|..|++++...                                 .+..+.++++|+|
T Consensus         5 ~~I~vIGaG~m-G~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV   83 (311)
T PRK06130          5 QNLAIIGAGTM-GSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV   83 (311)
T ss_pred             cEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence            68999999996 9999999999999999986421                                 2344557889999


Q ss_pred             EEecCCC
Q 027064          215 IAAAGQA  221 (229)
Q Consensus       215 isA~g~p  221 (229)
                      |.|+...
T Consensus        84 i~av~~~   90 (311)
T PRK06130         84 IEAVPEK   90 (311)
T ss_pred             EEeccCc
Confidence            9998643

>TIGR03316 ygeW probable carbamoyltransferase YgeW

Probab=96.08  E-value=0.64  Score=43.35  Aligned_cols=157  Identities=17%  Similarity=0.156  Sum_probs=99.4

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCCCC---HHHHHHHHHHhcCCCCCcEEEEeCCCC---CCCCHHHHHhcC-CccC
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQVS---EAELISKVHELNVMPDVHGILVQLPLP---KHINEEKVLGEI-SLEK  124 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~---~~el~~~I~~lN~d~~v~GIlvq~Plp---~~i~~~~i~~~I-~p~K  124 (229)
                      .|..---+=..++.++|..+..+.- .+.+   .|-+.+.++-|+.-  +|+|.+-.|-.   .+-..+++.+.. ..-|
T Consensus        52 pSTRTR~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~~~~~~~~~l~~~a~~~~~~~~  128 (357)
T TIGR03316        52 NSTRTRFSFASAMNLLGLHAQDLDE-GKSQIGHGETVRETAEMISFF--ADGIGIRDDMYIGVGNAYMREVAKYVQEGYK  128 (357)
T ss_pred             CCcchHHHHHHHHHHcCCcEEEeCC-ccccCCCCCCHHHHHHHHHHh--CcEEEEeCCCccccccHHHHHHHHhhhhccc
Confidence            4555555677889999999988863 2221   25566666666554  78999987642   222112333331 1122


Q ss_pred             c-c--cccCccchhhhhccCCCCCcccCCHHHHHHHHH-HhCC--CCCCCeEEEEcc-------chhhhHHHHHHHhhCC
Q 027064          125 D-V--DGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK-RSGV--TIKGKRAVVVGR-------SNIVGLPVSLLLLKAD  191 (229)
Q Consensus       125 D-V--Dg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~-~~~~--~l~gk~v~ViG~-------s~~VG~pla~~L~~~~  191 (229)
                      | |  -.+--+|.|       ...+.||=+.+=+--++ +.|.  .++|++|+++|.       ...|.+.++.++..-|
T Consensus       129 ~~~~~s~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~G~~~~l~g~kvai~~~~d~~~gr~~~v~~Sl~~~~~~~G  201 (357)
T TIGR03316       129 DGVLEQRPPLVNLQ-------CDIDHPTQAMADIMTLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVPQGIIGLMTRFG  201 (357)
T ss_pred             cccccCCCCEEECC-------CCCCCchHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcC
Confidence            2 0  113345543       13477998888666664 4553  378999999963       4466788888888899


Q ss_pred             CEEEEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          192 ATVTIVHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       192 atVtv~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      ++|++|+-..                         .++.+.++.||+|.+-+
T Consensus       202 ~~v~~~~P~~~~~~~~~~~~a~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~  253 (357)
T TIGR03316       202 MDVTLAHPEGYHLLPEVIEVAKKNAAENGGKFNIVNSMDEAFKDADIVYPKS  253 (357)
T ss_pred             CEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEECC
Confidence            9999996542                         24457789999998763

Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.07  E-value=0.018  Score=52.45  Aligned_cols=56  Identities=23%  Similarity=0.388  Sum_probs=43.7

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-----------------------CHHhhhccCcEEEEecCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-----------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-----------------------~l~~~~~~aDivisA~g~  220 (229)
                      +|++|.|||+|. ||..+|.+|..+|.  .+.+.+....                       +..+.+++|||||.+.|.
T Consensus         5 ~~~ki~iiGaG~-vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~   83 (315)
T PRK00066          5 QHNKVVLVGDGA-VGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGA   83 (315)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCC
Confidence            678999999977 69999999998877  4676665221                       112558899999999998


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      |.
T Consensus        84 ~~   85 (315)
T PRK00066         84 PQ   85 (315)
T ss_pred             CC
Confidence            74

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.04  E-value=0.011  Score=51.34  Aligned_cols=52  Identities=27%  Similarity=0.447  Sum_probs=41.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------C---HHh-hhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------D---PES-IVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------~---l~~-~~~~aDivisA~g~  220 (229)
                      ++++|+|.|. ||.++|..|...|.+|++......                    +   |.+ .+.+||++|.+||.
T Consensus         1 m~iiIiG~G~-vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIGAGR-VGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             CEEEEECCcH-HHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence            5799999999 499999999999999998866321                    0   222 27888999999985

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.01  E-value=0.014  Score=55.99  Aligned_cols=57  Identities=18%  Similarity=0.233  Sum_probs=45.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH----------------HhhhccCcEEEEecCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP----------------ESIVREADIVIAAAGQAM  222 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l----------------~~~~~~aDivisA~g~p~  222 (229)
                      +.|++|+|+|.|.. |..++.+|.++|++|++++.....+                .+.++.+|+||.+.|.|.
T Consensus        10 ~~~~~v~V~G~G~s-G~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~~   82 (488)
T PRK03369         10 LPGAPVLVAGAGVT-GRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFRP   82 (488)
T ss_pred             cCCCeEEEEcCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCCC
Confidence            36899999999997 9999999999999999998642111                133567899999999774

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=95.98  E-value=0.015  Score=52.51  Aligned_cols=53  Identities=28%  Similarity=0.417  Sum_probs=44.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~l~~~~~~aDivisA~g~p  221 (229)
                      .+|..||-|.+ |.|+|..|.++|..|++.+++-.               +..+..+.||+||+..+.+
T Consensus         1 ~kIafIGLG~M-G~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~   68 (286)
T COG2084           1 MKIAFIGLGIM-GSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDD   68 (286)
T ss_pred             CeEEEEcCchh-hHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCH
Confidence            37899999997 99999999999999999988622               3447899999999997754

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=95.96  E-value=0.012  Score=55.37  Aligned_cols=53  Identities=26%  Similarity=0.364  Sum_probs=43.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC------------------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      ++|+|||+|. ||+++|..|++++ ..|++..+.-.                        .+.+++++.|+||++.+-+
T Consensus         2 ~~ilviGaG~-Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           2 MKILVIGAGG-VGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CcEEEECCch-hHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            6899999988 5999999999988 78999866411                        2447788999999997643

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.96  E-value=0.011  Score=49.46  Aligned_cols=31  Identities=23%  Similarity=0.430  Sum_probs=26.8

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|.|||+|.+ |+.+|.+++..|+.|++++..
T Consensus         1 ~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~   31 (180)
T PF02737_consen    1 KVAVIGAGTM-GRGIAALFARAGYEVTLYDRS   31 (180)
T ss_dssp             EEEEES-SHH-HHHHHHHHHHTTSEEEEE-SS
T ss_pred             CEEEEcCCHH-HHHHHHHHHhCCCcEEEEECC
Confidence            6899999996 999999999999999999764

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=95.91  E-value=0.0056  Score=56.13  Aligned_cols=62  Identities=29%  Similarity=0.366  Sum_probs=49.5

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------------CCHHhhhccCcEEEEecC-----
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------------TDPESIVREADIVIAAAG-----  219 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------------~~l~~~~~~aDivisA~g-----  219 (229)
                      ..-+|+|||.|. ||.-.|++....||+||+.+..-                     .++++.+++||+||.|+=     
T Consensus       167 ~~~kv~iiGGGv-vgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgak  245 (371)
T COG0686         167 LPAKVVVLGGGV-VGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAK  245 (371)
T ss_pred             CCccEEEECCcc-ccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCC
Confidence            447899999988 59999999999999999986541                     146688999999999964     


Q ss_pred             CCCCCCCCC
Q 027064          220 QAMMVTMGI  228 (229)
Q Consensus       220 ~p~~i~~~~  228 (229)
                      .|.+++.+|
T Consensus       246 aPkLvt~e~  254 (371)
T COG0686         246 APKLVTREM  254 (371)
T ss_pred             CceehhHHH
Confidence            455666554

>PRK12828 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.013  Score=49.00  Aligned_cols=37  Identities=19%  Similarity=0.293  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||.++|.|+++.+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~   40 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRG   40 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCC
Confidence            3679999999999999999999999999999888764

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=95.89  E-value=0.023  Score=50.57  Aligned_cols=53  Identities=19%  Similarity=0.370  Sum_probs=44.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ++|.|||.|.+ |.+++..|.+.|..|+++++..              .+..+.++++|+||.+++.+
T Consensus         3 ~~IgviG~G~m-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~   69 (296)
T PRK11559          3 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNS   69 (296)
T ss_pred             ceEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCH
Confidence            57999999996 9999999999999999887642              24567788999999998743

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.016  Score=49.61  Aligned_cols=37  Identities=24%  Similarity=0.403  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~   39 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR   39 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999887553

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=95.87  E-value=0.022  Score=52.56  Aligned_cols=56  Identities=25%  Similarity=0.445  Sum_probs=45.3

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g  219 (229)
                      +.+++||+|.|+|.|.+ |+.+|..|..-|+ .+..|++++              +..+.+.+||+||++..
T Consensus       157 g~~~~gK~vgilG~G~I-G~~ia~rL~~Fg~-~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~p  226 (336)
T KOG0069|consen  157 GYDLEGKTVGILGLGRI-GKAIAKRLKPFGC-VILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCP  226 (336)
T ss_pred             cccccCCEEEEecCcHH-HHHHHHhhhhccc-eeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecC
Confidence            45789999999999997 9999999999884 444555432              56688999999998854

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.86  E-value=0.019  Score=48.79  Aligned_cols=36  Identities=39%  Similarity=0.563  Sum_probs=32.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++||+++|.|.|..+|+.++..|+++|++|.++.+.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~   37 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLN   37 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            578999999999999999999999999999887654

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.86  E-value=0.019  Score=54.85  Aligned_cols=57  Identities=16%  Similarity=0.244  Sum_probs=44.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH-----------------hhhccCcEEEEecCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE-----------------SIVREADIVIAAAGQA  221 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~-----------------~~~~~aDivisA~g~p  221 (229)
                      .+++|+|+|+|.|.. |++++.+|.++|+.|+++++......                 +.+..+|.||...|.|
T Consensus        12 ~~~~~~v~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~   85 (473)
T PRK00141         12 QELSGRVLVAGAGVS-GRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQLDSFSLVVTSPGWR   85 (473)
T ss_pred             cccCCeEEEEccCHH-HHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHhcCCCEEEeCCCCC
Confidence            468999999999997 99999999999999999986421111                 1234578888877765

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.85  E-value=0.004  Score=51.36  Aligned_cols=63  Identities=22%  Similarity=0.288  Sum_probs=43.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------------------------------CH
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------------------------------DP  204 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------------------------------~l  204 (229)
                      +...+|+|+|.|. ||+.++.+|...|+.|++.+....                                        .+
T Consensus        18 ~~p~~vvv~G~G~-vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f   96 (168)
T PF01262_consen   18 VPPAKVVVTGAGR-VGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF   96 (168)
T ss_dssp             E-T-EEEEESTSH-HHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred             CCCeEEEEECCCH-HHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence            4568999999999 599999999999999999855210                                        23


Q ss_pred             HhhhccCcEEEEec-----CCCCCCCCCC
Q 027064          205 ESIVREADIVIAAA-----GQAMMVTMGI  228 (229)
Q Consensus       205 ~~~~~~aDivisA~-----g~p~~i~~~~  228 (229)
                      .+.++.+|+||.+.     ..|.+|+.+|
T Consensus        97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~  125 (168)
T PF01262_consen   97 AEFIAPADIVIGNGLYWGKRAPRLVTEEM  125 (168)
T ss_dssp             HHHHHH-SEEEEHHHBTTSS---SBEHHH
T ss_pred             HHHHhhCcEEeeecccCCCCCCEEEEhHH
Confidence            46788999999753     4667776654

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.022  Score=48.79  Aligned_cols=37  Identities=32%  Similarity=0.431  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|.++|++|.++.+.
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~   42 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS   42 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999998887653

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.82  E-value=0.029  Score=47.21  Aligned_cols=58  Identities=26%  Similarity=0.307  Sum_probs=45.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CH----Hh---hhccCcEEEEecCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DP----ES---IVREADIVIAAAGQA  221 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l----~~---~~~~aDivisA~g~p  221 (229)
                      ++.||+++|.|++.-+|+.++..|.++|++|+++.+...            |+    .+   .....|++|...|..
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~   78 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGIL   78 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCC
Confidence            468999999999999999999999999999988866421            22    11   133569999998853

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.013  Score=50.19  Aligned_cols=37  Identities=16%  Similarity=0.309  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.|.-+|+.++..|.++|++|.++.+.
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~   38 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQD   38 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence            4789999999999999999999999999999988653

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.77  E-value=0.018  Score=54.42  Aligned_cols=53  Identities=23%  Similarity=0.294  Sum_probs=42.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------CHHhh---------------hccCcEEEEe
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------DPESI---------------VREADIVIAA  217 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~l~~~---------------~~~aDivisA  217 (229)
                      ++|.|||.|.+ |.|+|..|+++|.+|+.+++...               ++.+.               ...||+||.+
T Consensus         4 ~kI~VIGlG~~-G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~   82 (415)
T PRK11064          4 ETISVIGLGYI-GLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA   82 (415)
T ss_pred             cEEEEECcchh-hHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence            68999999995 99999999999999999976432               12222               2379999999


Q ss_pred             cCCC
Q 027064          218 AGQA  221 (229)
Q Consensus       218 ~g~p  221 (229)
                      ++.|
T Consensus        83 vptp   86 (415)
T PRK11064         83 VPTP   86 (415)
T ss_pred             cCCC
Confidence            9987

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=95.77  E-value=0.02  Score=53.72  Aligned_cols=53  Identities=30%  Similarity=0.491  Sum_probs=43.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------------------------CHHhhhccCcEE
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------------------------DPESIVREADIV  214 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------------------------~l~~~~~~aDiv  214 (229)
                      +|.|||.|.+ |.|+|..|.+.|.+|+++++...                                  +..+.++++|+|
T Consensus         2 kI~vIGlG~~-G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advv   80 (411)
T TIGR03026         2 KIAVIGLGYV-GLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVI   80 (411)
T ss_pred             EEEEECCCch-hHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEE
Confidence            6899999995 99999999999999999866321                                  223457789999


Q ss_pred             EEecCCCC
Q 027064          215 IAAAGQAM  222 (229)
Q Consensus       215 isA~g~p~  222 (229)
                      |.+++.|.
T Consensus        81 ii~vpt~~   88 (411)
T TIGR03026        81 IICVPTPL   88 (411)
T ss_pred             EEEeCCCC
Confidence            99999874

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.76  E-value=0.027  Score=51.62  Aligned_cols=51  Identities=22%  Similarity=0.180  Sum_probs=42.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC----------------------------------CCCHHhhhccCcE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH----------------------------------TTDPESIVREADI  213 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~----------------------------------t~~l~~~~~~aDi  213 (229)
                      ++|.|||.|.+ |.++|..|+..|..|++.+..                                  +.++++.+..||+
T Consensus         8 ~~VaVIGaG~M-G~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl   86 (321)
T PRK07066          8 KTFAAIGSGVI-GSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF   86 (321)
T ss_pred             CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence            78999999996 999999999999999988652                                  1245567889999


Q ss_pred             EEEecC
Q 027064          214 VIAAAG  219 (229)
Q Consensus       214 visA~g  219 (229)
                      ||-++.
T Consensus        87 ViEavp   92 (321)
T PRK07066         87 IQESAP   92 (321)
T ss_pred             EEECCc
Confidence            998865

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.75  E-value=0.012  Score=50.34  Aligned_cols=37  Identities=30%  Similarity=0.418  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|.+.-+|+.++..|+++|++|.++++.
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~   43 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRD   43 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence            4789999999999999999999999999999987664

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.74  E-value=0.013  Score=50.13  Aligned_cols=38  Identities=24%  Similarity=0.357  Sum_probs=34.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..++||+++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~   44 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRN   44 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCC
Confidence            45789999999999999999999999999999988664

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.73  E-value=0.035  Score=50.59  Aligned_cols=57  Identities=23%  Similarity=0.459  Sum_probs=44.6

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCC--------------------------CCHHhhhccCcEEEEe
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHT--------------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t--------------------------~~l~~~~~~aDivisA  217 (229)
                      ++.++|+|||+|. ||..++.+|...| +++.+++...                          .+. +.++.||+||.+
T Consensus         3 ~~~~KI~IIGaG~-vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~~l~~ADiVVit   80 (319)
T PTZ00117          3 VKRKKISMIGAGQ-IGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY-EDIKDSDVVVIT   80 (319)
T ss_pred             CCCcEEEEECCCH-HHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH-HHhCCCCEEEEC
Confidence            4578999999977 6999999999888 6777775421                          133 368999999999


Q ss_pred             cCCCCC
Q 027064          218 AGQAMM  223 (229)
Q Consensus       218 ~g~p~~  223 (229)
                      .|.|..
T Consensus        81 ag~~~~   86 (319)
T PTZ00117         81 AGVQRK   86 (319)
T ss_pred             CCCCCC
Confidence            988754

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=95.72  E-value=0.028  Score=53.90  Aligned_cols=53  Identities=26%  Similarity=0.272  Sum_probs=45.0

Q ss_pred             ccCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcCC
Q 027064          147 LPCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHSH  200 (229)
Q Consensus       147 ~PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~~  200 (229)
                      -+.|.+|++..++    +.+.+++||+|+|=|.|+ ||..++..|.+.||+|+ ++++.
T Consensus       213 ~eATG~Gv~~~~~~~l~~~~~~l~Gk~VaVqG~Gn-Vg~~aa~~L~e~GakVVavSD~~  270 (454)
T PTZ00079        213 PEATGYGLVYFVLEVLKKLNDSLEGKTVVVSGSGN-VAQYAVEKLLQLGAKVLTMSDSD  270 (454)
T ss_pred             CcccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEcCC
Confidence            3579888876655    457889999999999999 59999999999999876 88775

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.70  E-value=0.11  Score=51.66  Aligned_cols=121  Identities=19%  Similarity=0.305  Sum_probs=69.6

Q ss_pred             HHHHHHHHHcC-CeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCcc----------Ccc
Q 027064           58 SMKRKACAEVG-IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLE----------KDV  126 (229)
Q Consensus        58 ~~k~k~a~~~G-i~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~----------KDV  126 (229)
                      ......|-.+| ..+-...=|.+.+-.++++.|.+=|-+....=|.-..|||.      +...|=|.          ...
T Consensus       204 ~~ea~rC~~C~~~~~C~~~CP~~~~i~~~~~~~~~g~~~~a~~~~~~~np~p~------~~grvCp~~~~Ce~~C~~~~~  277 (639)
T PRK12809        204 TYESDRCVYCAEKANCNWHCPLHNAIPDYIRLVQEGKIIEAAELCHQTSSLPE------ICGRVCPQDRLCEGACTLKDH  277 (639)
T ss_pred             HHHHHHHhCCCCCCcccccCCCCCcHHHHHHHHHCCCHHHHHHHHHHhCCcch------hhcccCCCCCChHHhccCCCc
Confidence            34556666666 43444455666666666666655444444444455567772      33334331          122


Q ss_pred             cccCccchhhhhccCCCCCcccCCHHHHHHHHHHhC-------CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          127 DGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSG-------VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       127 Dg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~-------~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      |  .|++.+.|-             +.+.+.....+       ....||+|+|||+|.. |...|..|.++|+.|+++.+
T Consensus       278 ~--~~v~i~~l~-------------r~~~d~~~~~~~~~~~~~~~~~~kkVaIIG~Gpa-Gl~aA~~L~~~G~~Vtv~e~  341 (639)
T PRK12809        278 S--GAVSIGNLE-------------RYITDTALAMGWRPDVSKVVPRSEKVAVIGAGPA-GLGCADILARAGVQVDVFDR  341 (639)
T ss_pred             C--CCcChhHHH-------------HHHHHHHHHhCCCCCCCcccCCCCEEEEECcCHH-HHHHHHHHHHcCCcEEEEeC
Confidence            2  144444432             11111111111       1236999999999997 99999999999999999965


Q ss_pred             C
Q 027064          200 H  200 (229)
Q Consensus       200 ~  200 (229)
                      .
T Consensus       342 ~  342 (639)
T PRK12809        342 H  342 (639)
T ss_pred             C
Confidence            4

>PLN02712 arogenate dehydrogenase

Probab=95.70  E-value=0.027  Score=56.42  Aligned_cols=57  Identities=14%  Similarity=0.212  Sum_probs=45.7

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhc-cCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVR-EADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~-~aDivisA~g  219 (229)
                      +.++++++|.|||.|.+ |..++..|.+.|.+|+++++...             ++.+.+. .+|+||.|+.
T Consensus       364 ~~~~~~~kIgIIGlG~m-G~slA~~L~~~G~~V~~~dr~~~~~~a~~~Gv~~~~~~~el~~~~aDvVILavP  434 (667)
T PLN02712        364 VNDGSKLKIAIVGFGNF-GQFLAKTMVKQGHTVLAYSRSDYSDEAQKLGVSYFSDADDLCEEHPEVILLCTS  434 (667)
T ss_pred             cCCCCCCEEEEEecCHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHcCCeEeCCHHHHHhcCCCEEEECCC
Confidence            45678899999999995 99999999999999998876532             2334454 4899999987

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.022  Score=49.58  Aligned_cols=58  Identities=21%  Similarity=0.270  Sum_probs=44.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C---------------------CHHhhhccCcEEEEecCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T---------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~---------------------~l~~~~~~aDivisA~g~p  221 (229)
                      .++||.++|.|+|.-+|+.++..|+++|++|+++.+.. .                     ++.+...+-|++|..+|..
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~   90 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN   90 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence            36899999999999899999999999999998775432 1                     1123345679999988863

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.69  E-value=0.025  Score=50.97  Aligned_cols=32  Identities=16%  Similarity=0.321  Sum_probs=28.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.|||.|.+ |.++|..|+++|..|+++++.
T Consensus         3 ~~V~VIG~G~m-G~~iA~~la~~G~~V~v~d~~   34 (308)
T PRK06129          3 GSVAIIGAGLI-GRAWAIVFARAGHEVRLWDAD   34 (308)
T ss_pred             cEEEEECccHH-HHHHHHHHHHCCCeeEEEeCC
Confidence            47999998885 999999999999999999764

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.68  E-value=0.028  Score=52.75  Aligned_cols=35  Identities=29%  Similarity=0.428  Sum_probs=32.3

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++||+++|+|.|. .|+.+|..|+++|++|++++..
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~   37 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGK   37 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCC
Confidence            5799999999999 6999999999999999999764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.65  E-value=0.016  Score=49.66  Aligned_cols=37  Identities=19%  Similarity=0.319  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|+|.-+|+.++..|+++|++|.++.+.
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~   42 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDIT   42 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC
Confidence            4789999999999999999999999999999988764

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.62  E-value=0.017  Score=48.94  Aligned_cols=38  Identities=24%  Similarity=0.358  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||+++|+|++.-+|+.++..|+++|++|++..+..
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~   39 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE   39 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence            36789999999999999999999999999999887653

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=95.60  E-value=0.02  Score=51.14  Aligned_cols=32  Identities=28%  Similarity=0.367  Sum_probs=29.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.|||.|.+ |.++|..|+..|..|++++..
T Consensus         5 ~~V~vIG~G~m-G~~iA~~l~~~G~~V~~~d~~   36 (295)
T PLN02545          5 KKVGVVGAGQM-GSGIAQLAAAAGMDVWLLDSD   36 (295)
T ss_pred             CEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCC
Confidence            68999999996 999999999999999998753

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.59  E-value=0.025  Score=48.21  Aligned_cols=36  Identities=25%  Similarity=0.512  Sum_probs=31.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      .+++++|+|||.|++ |..++..|...|. ++++++..
T Consensus        18 kl~~~~VlviG~Ggl-Gs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIGAGGL-GSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEecCC
Confidence            468899999999995 9999999999998 78888654

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.58  E-value=0.022  Score=50.79  Aligned_cols=32  Identities=28%  Similarity=0.348  Sum_probs=29.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.|||.|.+ |.++|..|++.|..|++++..
T Consensus         4 ~~I~ViGaG~m-G~~iA~~la~~G~~V~l~d~~   35 (291)
T PRK06035          4 KVIGVVGSGVM-GQGIAQVFARTGYDVTIVDVS   35 (291)
T ss_pred             cEEEEECccHH-HHHHHHHHHhcCCeEEEEeCC
Confidence            68999999996 999999999999999998653

>PLN02688 pyrroline-5-carboxylate reductase

Probab=95.56  E-value=0.027  Score=49.20  Aligned_cols=53  Identities=15%  Similarity=0.340  Sum_probs=41.8

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC----EEEEE-cCCC--------------CCHHhhhccCcEEEEecCCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA----TVTIV-HSHT--------------TDPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a----tVtv~-~~~t--------------~~l~~~~~~aDivisA~g~p~~  223 (229)
                      +|.+||.|.+ |.+++..|.+.|.    +|+++ ++..              .+..+.++++|+||.++ .|..
T Consensus         2 kI~~IG~G~m-G~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v-~~~~   73 (266)
T PLN02688          2 RVGFIGAGKM-AEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAV-KPQV   73 (266)
T ss_pred             eEEEECCcHH-HHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEE-CcHH
Confidence            6899999996 9999999999887    88888 5532              13445678899999999 4543

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=95.54  E-value=0.04  Score=53.70  Aligned_cols=106  Identities=20%  Similarity=0.218  Sum_probs=65.3

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHH
Q 027064           76 LPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCL  155 (229)
Q Consensus        76 l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~  155 (229)
                      =|.+++..+++..|.+=|-.....=|.-..|||.      +...+=|.   .+-...+.+..        -.|++-.++-
T Consensus        53 CP~~~~i~~~~~~~~~g~~~~a~~~~~~~np~~~------~~grvc~~---~ce~~C~r~~~--------~~~v~i~~l~  115 (564)
T PRK12771         53 CPAGEDIRGWLALVRGGDYEYAWRRLTKDNPFPA------VMGRVCYH---PCESGCNRGQV--------DDAVGINAVE  115 (564)
T ss_pred             CCCCCcHHHHHHHHHCCCHHHHHHHHHHhCCcch------HhhCcCCc---hhHHhccCCCC--------CCCcCHHHHH
Confidence            3556666677776665554444444555567873      44444443   23333333211        1255556544


Q ss_pred             HHHHHh----C------CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          156 ELLKRS----G------VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       156 ~lL~~~----~------~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +..-.+    +      ..-.|++|+|||+|.+ |..+|..|..+|++|+++.+
T Consensus       116 r~~~~~~~~~~~~~~~~~~~~g~~V~VIGaGpa-GL~aA~~l~~~G~~V~v~e~  168 (564)
T PRK12771        116 RFLGDYAIANGWKFPAPAPDTGKRVAVIGGGPA-GLSAAYHLRRMGHAVTIFEA  168 (564)
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEec
Confidence            432111    1      1346999999999996 99999999999999999974

>PLN02256 arogenate dehydrogenase

Probab=95.54  E-value=0.051  Score=49.34  Aligned_cols=56  Identities=20%  Similarity=0.297  Sum_probs=43.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhh-ccCcEEEEecCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIV-READIVIAAAGQ  220 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~-~~aDivisA~g~  220 (229)
                      +-+++++.|||.|.+ |..++..|.+.|.+|+++++...             +..+.+ ..+|+||.|++.
T Consensus        33 ~~~~~kI~IIG~G~m-G~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~  102 (304)
T PLN02256         33 KSRKLKIGIVGFGNF-GQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSFFRDPDDFCEEHPDVVLLCTSI  102 (304)
T ss_pred             cCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECccHHHHHHHcCCeeeCCHHHHhhCCCCEEEEecCH
Confidence            457889999999986 99999999999988888765431             233344 368999999873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.54  E-value=0.023  Score=48.32  Aligned_cols=36  Identities=25%  Similarity=0.340  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||+++|.|++.-+|+.++..|.++|++|+++.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r   37 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGR   37 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            478999999999988999999999999999887755

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.52  E-value=0.021  Score=50.73  Aligned_cols=51  Identities=27%  Similarity=0.268  Sum_probs=41.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---------------HHhhhccCcEEEEecCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---------------PESIVREADIVIAAAGQ  220 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---------------l~~~~~~aDivisA~g~  220 (229)
                      +|.|||.|.+ |..++..|.++|..|+.+++....               ..+.+++||+||.|++.
T Consensus         2 ~I~IIG~G~m-G~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~   67 (279)
T PRK07417          2 KIGIVGLGLI-GGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPI   67 (279)
T ss_pred             eEEEEeecHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCH
Confidence            6899999995 999999999999999999764211               11357889999999873

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.51  E-value=0.027  Score=49.45  Aligned_cols=35  Identities=26%  Similarity=0.443  Sum_probs=30.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .+++++|+|+|.|++ |.+++.+|...|. ++++++.
T Consensus        21 ~L~~~~VlvvG~Ggl-Gs~va~~La~~Gvg~i~lvD~   56 (240)
T TIGR02355        21 ALKASRVLIVGLGGL-GCAASQYLAAAGVGNLTLLDF   56 (240)
T ss_pred             HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEEeC
Confidence            467899999999995 9999999999987 6888754

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.46  E-value=0.033  Score=52.65  Aligned_cols=60  Identities=25%  Similarity=0.388  Sum_probs=46.6

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC------------------------HHhhhccCcEEEEe
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD------------------------PESIVREADIVIAA  217 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~------------------------l~~~~~~aDivisA  217 (229)
                      ..+++||+++|.|+|.-+|+.++..|.++|++|+++.++...                        +.+.+.+.|++|..
T Consensus       173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn  252 (406)
T PRK07424        173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN  252 (406)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence            346789999999999999999999999999999988654321                        11234567999987


Q ss_pred             cCCC
Q 027064          218 AGQA  221 (229)
Q Consensus       218 ~g~p  221 (229)
                      .|..
T Consensus       253 AGi~  256 (406)
T PRK07424        253 HGIN  256 (406)
T ss_pred             CCcC
Confidence            7753

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.034  Score=49.42  Aligned_cols=39  Identities=28%  Similarity=0.378  Sum_probs=34.5

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ...+.||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~   73 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARR   73 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            456789999999998889999999999999999988654

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.022  Score=49.12  Aligned_cols=38  Identities=39%  Similarity=0.566  Sum_probs=34.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|+|.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~   41 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRD   41 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            35789999999999999999999999999999988664

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=95.42  E-value=0.04  Score=52.25  Aligned_cols=57  Identities=21%  Similarity=0.256  Sum_probs=44.6

Q ss_pred             CCCCeEEEEccchhhhHH-HHHHHhhCCCEEEEEcCCCCC----HH------------hhhccCcEEEEecCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLP-VSLLLLKADATVTIVHSHTTD----PE------------SIVREADIVIAAAGQAM  222 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~p-la~~L~~~~atVtv~~~~t~~----l~------------~~~~~aDivisA~g~p~  222 (229)
                      .++|++.|+|.|.. |.. +|.+|.++|++|++++.+...    +.            +.+..+|.||..-|.|.
T Consensus         5 ~~~~~v~viG~G~s-G~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~d~vv~spgi~~   78 (461)
T PRK00421          5 RRIKRIHFVGIGGI-GMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFIGHDAENIKDADVVVYSSAIPD   78 (461)
T ss_pred             CCCCEEEEEEEchh-hHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeCCCCHHHCCCCCEEEECCCCCC
Confidence            46899999999997 999 799999999999999875321    11            12346898988888764

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.41  E-value=0.031  Score=47.95  Aligned_cols=37  Identities=24%  Similarity=0.440  Sum_probs=32.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+.||.++|.|++.-+|+.++..|.++|++|.++.++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~   40 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS   40 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4679999999999999999999999999998876443

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.021  Score=48.89  Aligned_cols=37  Identities=38%  Similarity=0.581  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~   42 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARH   42 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            4789999999998889999999999999999988664

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.38  E-value=0.042  Score=49.36  Aligned_cols=54  Identities=19%  Similarity=0.233  Sum_probs=42.9

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC----------------CCHHhhhccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT----------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t----------------~~l~~~~~~aDivisA~g~p  221 (229)
                      .++|+|||.|.+ |..++..|.+.|.  .|+++++..                .+..+.+.++|+||.|++.+
T Consensus         6 ~~~I~IIG~G~m-G~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~   77 (307)
T PRK07502          6 FDRVALIGIGLI-GSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVG   77 (307)
T ss_pred             CcEEEEEeeCHH-HHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHH
Confidence            368999999985 9999999998885  788886631                24456678999999999753

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.022  Score=48.31  Aligned_cols=37  Identities=22%  Similarity=0.407  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|.+..+|+.++..|+++|++|+++.++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~   38 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD   38 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence            3689999999999999999999999999998887554

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.37  E-value=0.023  Score=49.02  Aligned_cols=37  Identities=19%  Similarity=0.337  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~   38 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKS   38 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            3679999999999989999999999999999988654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.37  E-value=0.036  Score=51.12  Aligned_cols=37  Identities=24%  Similarity=0.398  Sum_probs=32.1

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      -.+++++|+|||.|. +|.+++.+|...|. .+++++..
T Consensus        20 ~~L~~~~VlIiG~Gg-lGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         20 RKIREKHVLIVGAGA-LGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             HhhcCCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEcCC
Confidence            357889999999999 59999999999998 78888653

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=95.37  E-value=0.047  Score=47.02  Aligned_cols=37  Identities=32%  Similarity=0.442  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~   42 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH   42 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999889999999999999999887553

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.022  Score=48.90  Aligned_cols=36  Identities=22%  Similarity=0.393  Sum_probs=33.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .++||.++|.|.+.-+|+.++..|+++|++|+++.+
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r   39 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADL   39 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            468999999999999999999999999999988865

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.36  E-value=0.039  Score=47.61  Aligned_cols=57  Identities=25%  Similarity=0.281  Sum_probs=42.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------C-------C-------HHhhh-ccCcEEEEec
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------T-------D-------PESIV-READIVIAAA  218 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------~-------~-------l~~~~-~~aDivisA~  218 (229)
                      ...+++++|+|+++.+|+.++..|+++|++|+.+.+..          .       |       +.+.+ ...|+||.++
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~   93 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT   93 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence            35689999999988899999999999999987653310          0       1       12334 5789999988


Q ss_pred             CC
Q 027064          219 GQ  220 (229)
Q Consensus       219 g~  220 (229)
                      |.
T Consensus        94 g~   95 (251)
T PLN00141         94 GF   95 (251)
T ss_pred             CC
Confidence            75

>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.35  E-value=0.042  Score=52.51  Aligned_cols=56  Identities=14%  Similarity=0.196  Sum_probs=43.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-C------HH------------hhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-D------PE------------SIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-~------l~------------~~~~~aDivisA~g~p  221 (229)
                      ++||+|+|+|.|.. |++++.+|.++|+.|++.+.+.. +      +.            +.+...|.||..-|.|
T Consensus         6 ~~~~~v~v~G~G~s-G~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~vV~SpgI~   80 (468)
T PRK04690          6 LEGRRVALWGWGRE-GRAAYRALRAHLPAQALTLFCNAVEAREVGALADAALLVETEASAQRLAAFDVVVKSPGIS   80 (468)
T ss_pred             cCCCEEEEEccchh-hHHHHHHHHHcCCEEEEEcCCCcccchHHHHHhhcCEEEeCCCChHHccCCCEEEECCCCC
Confidence            46999999999997 99999999999999999886431 1      11            2244678888877766

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.33  E-value=0.032  Score=47.94  Aligned_cols=37  Identities=30%  Similarity=0.409  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.||+|+|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~   48 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG   48 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999887553

>PRK12829 short chain dehydrogenase; Provisional

Probab=95.33  E-value=0.025  Score=48.34  Aligned_cols=37  Identities=22%  Similarity=0.372  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++|+++|.|++..+|+.++..|+++|++|+++.+.
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~   44 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS   44 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            3689999999999999999999999999999888653

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.02  Score=49.78  Aligned_cols=37  Identities=27%  Similarity=0.403  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~   41 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRN   41 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999888999999999999999988653

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.32  E-value=0.021  Score=48.99  Aligned_cols=37  Identities=32%  Similarity=0.419  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|.+..+|..++..|.++|++|+++.+.
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~   45 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK   45 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            4789999999999999999999999999999988764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.32  E-value=0.048  Score=49.34  Aligned_cols=35  Identities=31%  Similarity=0.351  Sum_probs=31.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++||+|+|.|+++.+|..++..|+++|+.|+.+.+
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r   36 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSL   36 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeC
Confidence            46899999999999999999999999999988754

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=95.32  E-value=0.048  Score=48.70  Aligned_cols=52  Identities=21%  Similarity=0.384  Sum_probs=41.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------CCHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------~~l~~~~~~aDivisA~g  219 (229)
                      .+|.|||.|.+ |.+++..|++.|..|+++++..                            .+..+.++.+|+||.++.
T Consensus         2 mkI~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~   80 (325)
T PRK00094          2 MKIAVLGAGSW-GTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP   80 (325)
T ss_pred             CEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence            37999999995 9999999999999999986631                            133345678999999887


Q ss_pred             C
Q 027064          220 Q  220 (229)
Q Consensus       220 ~  220 (229)
                      .
T Consensus        81 ~   81 (325)
T PRK00094         81 S   81 (325)
T ss_pred             H
Confidence            5

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=95.31  E-value=0.03  Score=47.58  Aligned_cols=52  Identities=19%  Similarity=0.229  Sum_probs=43.3

Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------------CHHhhhccCcEEEEecCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------------~l~~~~~~aDivisA~g~p  221 (229)
                      |+|+|+++.+|++++..|+..+.+|+.+.|...                       .+.+.++.+|.||.+++..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~   75 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPS   75 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence            689999888999999999999999999877531                       2446688999999999864

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.30  E-value=0.046  Score=48.69  Aligned_cols=32  Identities=19%  Similarity=0.234  Sum_probs=29.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.|||.|.+ |.++|..|+..|.+|++.++.
T Consensus         5 ~kI~vIGaG~m-G~~iA~~la~~G~~V~l~d~~   36 (292)
T PRK07530          5 KKVGVIGAGQM-GNGIAHVCALAGYDVLLNDVS   36 (292)
T ss_pred             CEEEEECCcHH-HHHHHHHHHHCCCeEEEEeCC
Confidence            68999999996 999999999999999998653

>PRK06057 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.024  Score=48.66  Aligned_cols=37  Identities=27%  Similarity=0.372  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||+++|+|++.-+|+.++..|.++|++|+++.+.
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~   40 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDID   40 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            3689999999999999999999999999999888654

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.028  Score=48.62  Aligned_cols=37  Identities=35%  Similarity=0.527  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDID   39 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999998889999999999999999988664

>PRK06182 short chain dehydrogenase; Validated

Probab=95.28  E-value=0.043  Score=47.63  Aligned_cols=35  Identities=26%  Similarity=0.171  Sum_probs=31.4

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.++|.|.+.-+|+.++..|+++|++|+.+.+.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~   36 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR   36 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            57999999998889999999999999999987653

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.021  Score=48.69  Aligned_cols=35  Identities=29%  Similarity=0.369  Sum_probs=32.2

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++||+++|.|.+.-+|+.++..|+++|++|+++.+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r   37 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAAR   37 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence            57899999999999999999999999999988755

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=95.28  E-value=0.042  Score=52.97  Aligned_cols=53  Identities=21%  Similarity=0.238  Sum_probs=43.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------------CCHHhhhccCcE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------------TDPESIVREADI  213 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------------~~l~~~~~~aDi  213 (229)
                      ++|.|||.|.+ |.++|..|++.|..|++++...                                  .++.+.+++||+
T Consensus         5 ~kIavIG~G~M-G~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~   83 (495)
T PRK07531          5 MKAACIGGGVI-GGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW   83 (495)
T ss_pred             CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence            58999999996 9999999999999999986531                                  234466789999


Q ss_pred             EEEecCCC
Q 027064          214 VIAAAGQA  221 (229)
Q Consensus       214 visA~g~p  221 (229)
                      ||.++...
T Consensus        84 Vieavpe~   91 (495)
T PRK07531         84 IQESVPER   91 (495)
T ss_pred             EEEcCcCC
Confidence            99887643

>PRK05717 oxidoreductase; Validated

Probab=95.27  E-value=0.032  Score=47.81  Aligned_cols=38  Identities=21%  Similarity=0.316  Sum_probs=34.1

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ..+++||.++|.|.+..+|+.++..|+++|++|.++.+
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~   42 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADL   42 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC
Confidence            35689999999999999999999999999999988743

>PLN02253 xanthoxin dehydrogenase

Probab=95.24  E-value=0.046  Score=47.51  Aligned_cols=36  Identities=33%  Similarity=0.404  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+.||.++|.|.+.-+|+.++..|+++|++|.++.+
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~   50 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL   50 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC
Confidence            467999999999999999999999999999988754

>PRK08223 hypothetical protein; Validated

Probab=95.23  E-value=0.044  Score=49.65  Aligned_cols=35  Identities=20%  Similarity=0.272  Sum_probs=30.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .|+.++|+|||.|++ |-+++.+|...|. ++++++.
T Consensus        24 kL~~s~VlIvG~GGL-Gs~va~~LA~aGVG~i~lvD~   59 (287)
T PRK08223         24 RLRNSRVAIAGLGGV-GGIHLLTLARLGIGKFTIADF   59 (287)
T ss_pred             HHhcCCEEEECCCHH-HHHHHHHHHHhCCCeEEEEeC
Confidence            467899999999995 9999999999998 7888754

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.23  E-value=0.026  Score=48.23  Aligned_cols=37  Identities=27%  Similarity=0.415  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||+++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~   40 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRD   40 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            4689999999999999999999999999998888654

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.033  Score=47.67  Aligned_cols=37  Identities=27%  Similarity=0.378  Sum_probs=33.5

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+++||.++|.|++.-+|+.++..|+++|+.|+++.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r   39 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGR   39 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcC
Confidence            5789999999999999999999999999999887754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.19  E-value=0.03  Score=48.37  Aligned_cols=36  Identities=17%  Similarity=0.345  Sum_probs=33.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||.++|.|+|.-+|+.++..|+++|++|+++.+
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~   40 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN   40 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            578999999999999999999999999999988754

>PRK12743 oxidoreductase; Provisional

Probab=95.19  E-value=0.06  Score=46.26  Aligned_cols=34  Identities=21%  Similarity=0.282  Sum_probs=30.9

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+|+++|.|++.-+|+.++..|+++|++|.++.+
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~   34 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWH   34 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            3689999999999999999999999999988754

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.18  E-value=0.043  Score=47.36  Aligned_cols=35  Identities=26%  Similarity=0.209  Sum_probs=31.5

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++.++|.|++.-+|+.++..|.++|++|+.+.+.
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~   37 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN   37 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999999999999887654

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.18  E-value=0.057  Score=47.88  Aligned_cols=54  Identities=17%  Similarity=0.262  Sum_probs=42.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCC----CEEEEEcCCCC----------------CHHhhhccCcEEEEecCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKAD----ATVTIVHSHTT----------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~----atVtv~~~~t~----------------~l~~~~~~aDivisA~g~  220 (229)
                      ++.++.+||.|.+ |.+++..|.+.|    ..|+++++...                +..+...+||+||.++.-
T Consensus         2 ~~mkI~~IG~G~m-G~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p   75 (279)
T PRK07679          2 SIQNISFLGAGSI-AEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKP   75 (279)
T ss_pred             CCCEEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCH
Confidence            3568999999996 999999999887    57888876321                233557789999999863

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.17  E-value=0.039  Score=47.08  Aligned_cols=36  Identities=17%  Similarity=0.320  Sum_probs=31.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      .|+.++|+|+|.|.+ |..++..|...|. ++++++..
T Consensus        18 ~L~~~~V~IvG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGLGGL-GSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEECCC
Confidence            467899999999995 9999999999998 79988654

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.17  E-value=0.049  Score=49.34  Aligned_cols=54  Identities=24%  Similarity=0.390  Sum_probs=43.1

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------CCHHhhhccCcEEEEec
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------~~l~~~~~~aDivisA~  218 (229)
                      ..+|.|||.|.+ |.+++..|.+.|..|++.++..                            .++.+.++.+|+||.++
T Consensus         4 ~m~I~iIG~G~m-G~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v   82 (328)
T PRK14618          4 GMRVAVLGAGAW-GTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV   82 (328)
T ss_pred             CCeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence            358999999996 9999999999999999987631                            13445567899999987


Q ss_pred             CCC
Q 027064          219 GQA  221 (229)
Q Consensus       219 g~p  221 (229)
                      ...
T Consensus        83 ~~~   85 (328)
T PRK14618         83 PSK   85 (328)
T ss_pred             chH
Confidence            654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.14  E-value=0.07  Score=45.83  Aligned_cols=36  Identities=28%  Similarity=0.362  Sum_probs=32.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||.++|.|.+.-+|+.++..|.++|++|..+++
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~   42 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINI   42 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecC
Confidence            478999999999999999999999999999887644

>PRK09186 flagellin modification protein A; Provisional

Probab=95.13  E-value=0.032  Score=47.50  Aligned_cols=35  Identities=23%  Similarity=0.437  Sum_probs=31.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++||+++|.|++.-+|+.++..|.++|++|+++.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r   36 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADI   36 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec
Confidence            57899999999999999999999999999888754

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.037  Score=47.22  Aligned_cols=37  Identities=27%  Similarity=0.428  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.||+++|.|++.-+|..++..|+++|++|+++.+.
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~   48 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS   48 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999887653

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.12  E-value=0.041  Score=48.36  Aligned_cols=35  Identities=34%  Similarity=0.470  Sum_probs=30.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .|+.++|+|||.|++ |-+++.+|...|. ++++++.
T Consensus        29 ~L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD~   64 (245)
T PRK05690         29 KLKAARVLVVGLGGL-GCAASQYLAAAGVGTLTLVDF   64 (245)
T ss_pred             HhcCCeEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence            468899999999995 9999999999987 7888754

>PRK05225 ketol-acid reductoisomerase; Validated

Probab=95.11  E-value=0.03  Score=53.86  Aligned_cols=55  Identities=25%  Similarity=0.380  Sum_probs=45.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------CCHHhhhccCcEEEEecC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------~~l~~~~~~aDivisA~g  219 (229)
                      .++||+|+|||.|.. |+.-|..|...|.+|++.-+..                   .++.+.++.||+|+..++
T Consensus        33 ~LkgKtIaIIGyGSq-G~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlP  106 (487)
T PRK05225         33 YLKGKKIVIVGCGAQ-GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTP  106 (487)
T ss_pred             HhCCCEEEEEccCHH-HHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCC
Confidence            368999999999996 9999999998999998554331                   146688999999999876

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.10  E-value=0.059  Score=46.15  Aligned_cols=52  Identities=27%  Similarity=0.346  Sum_probs=40.0

Q ss_pred             eEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ++.||| .|. +|..++..|.+.|..|++.++..                         .+..+.+..+|+||.|+..+
T Consensus         2 kI~IIGG~G~-mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~   79 (219)
T TIGR01915         2 KIAVLGGTGD-QGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWD   79 (219)
T ss_pred             EEEEEcCCCH-HHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHH
Confidence            689998 677 59999999999999998875532                         12334577899999998744

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=95.08  E-value=0.049  Score=47.36  Aligned_cols=54  Identities=22%  Similarity=0.291  Sum_probs=43.2

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC------HHhhhccC--cEEEEecCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD------PESIVREA--DIVIAAAGQAM  222 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~------l~~~~~~a--DivisA~g~p~  222 (229)
                      +|+|+|+++.+|+.++..|+++|..|+.+.+...|      +.+.+...  |+||...|.+.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~   62 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAYTD   62 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCcccc
Confidence            58999999999999999999999999988775433      33456655  99999888643

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.06  E-value=0.032  Score=48.22  Aligned_cols=38  Identities=29%  Similarity=0.427  Sum_probs=34.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||+++|.|.+.-+|+.++..|+.+|++|.++.+.
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~   43 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDIN   43 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            46789999999999999999999999999998887654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.06  E-value=0.05  Score=46.13  Aligned_cols=34  Identities=35%  Similarity=0.498  Sum_probs=31.0

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ||+++|.|+++.+|+.++..|+++|++|+++.+.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~   34 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLG   34 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999988764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=95.05  E-value=0.055  Score=48.78  Aligned_cols=57  Identities=19%  Similarity=0.229  Sum_probs=43.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCCC-------------------------CHHhhhccCcEEEEe
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHTT-------------------------DPESIVREADIVIAA  217 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t~-------------------------~l~~~~~~aDivisA  217 (229)
                      ++||+++|.|+++.+|+.++..|+++|  +.|+++.+...                         ++.+.++..|+||..
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~   81 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA   81 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence            478999999999999999999999886  68887754211                         122445678999998


Q ss_pred             cCCC
Q 027064          218 AGQA  221 (229)
Q Consensus       218 ~g~p  221 (229)
                      .|..
T Consensus        82 Ag~~   85 (324)
T TIGR03589        82 AALK   85 (324)
T ss_pred             cccC
Confidence            8754

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=95.05  E-value=0.07  Score=48.39  Aligned_cols=53  Identities=21%  Similarity=0.337  Sum_probs=41.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------------CHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------------~l~~~~~~aDivisA~g~  220 (229)
                      ++|.|||.|. ||..+|..|+.+|. .|.+++....                          +..+ +++||+||.+.|.
T Consensus         2 ~KV~VIGaG~-vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~   79 (305)
T TIGR01763         2 KKISVIGAGF-VGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL   79 (305)
T ss_pred             CEEEEECcCH-HHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence            4799999988 69999999998875 7888865211                          2323 7899999999998


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      |.
T Consensus        80 p~   81 (305)
T TIGR01763        80 PR   81 (305)
T ss_pred             CC
Confidence            75

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.05  E-value=0.11  Score=47.41  Aligned_cols=51  Identities=24%  Similarity=0.246  Sum_probs=38.4

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      ++|....++..+...+..-.|.+|+|.|.|. ||..+++++...|++|+++.
T Consensus       164 l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~vi~~~  214 (360)
T PLN02586        164 LLCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVIS  214 (360)
T ss_pred             hhcchHHHHHHHHHhcccCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEe
Confidence            4555555566666555434799999999876 69999999999999877653

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=95.04  E-value=0.055  Score=45.83  Aligned_cols=60  Identities=25%  Similarity=0.404  Sum_probs=40.3

Q ss_pred             CCCCeEEEEcc----------------chhhhHHHHHHHhhCCCEEEEEcCCCC--------------------CHHhhh
Q 027064          165 IKGKRAVVVGR----------------SNIVGLPVSLLLLKADATVTIVHSHTT--------------------DPESIV  208 (229)
Q Consensus       165 l~gk~v~ViG~----------------s~~VG~pla~~L~~~~atVtv~~~~t~--------------------~l~~~~  208 (229)
                      |+||+|+|-+.                |+-.|..+|..+..+||.|+..|..+.                    -+.+.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~   80 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL   80 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence            46777777653                455699999999999999999988742                    122557


Q ss_pred             ccCcEEEEecCCCCCC
Q 027064          209 READIVIAAAGQAMMV  224 (229)
Q Consensus       209 ~~aDivisA~g~p~~i  224 (229)
                      +++|++|.|.-...|-
T Consensus        81 ~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   81 PSADIIIMAAAVSDFR   96 (185)
T ss_dssp             GGGSEEEE-SB--SEE
T ss_pred             CcceeEEEecchhhee
Confidence            7899999998877764

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.04  E-value=0.056  Score=48.93  Aligned_cols=54  Identities=24%  Similarity=0.378  Sum_probs=42.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCCC-------CHH----------------hhhccCcEEEEecCCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHTT-------DPE----------------SIVREADIVIAAAGQAMM  223 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t~-------~l~----------------~~~~~aDivisA~g~p~~  223 (229)
                      +|.|||.|. ||.+++..|+.+|  ..|.++++...       ++.                +.++.||+||.++|.|.-
T Consensus         2 kI~IIGaG~-VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~~~   80 (308)
T cd05292           2 KVAIVGAGF-VGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGANQK   80 (308)
T ss_pred             EEEEECCCH-HHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCCCC
Confidence            699999987 6999999999998  36888876431       111                447899999999998753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.03  E-value=0.04  Score=46.76  Aligned_cols=37  Identities=22%  Similarity=0.315  Sum_probs=33.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|++..+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~   39 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN   39 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999998889999999999999999988764

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.02  E-value=0.046  Score=48.95  Aligned_cols=52  Identities=13%  Similarity=0.179  Sum_probs=42.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~  220 (229)
                      +|+|.|+++.+|+.++..|+++|.+|+...+...                     ++.+.++.+|+||.+++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence            7999999999999999999999999988755321                     134567888999998763

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.97  E-value=0.074  Score=47.76  Aligned_cols=52  Identities=12%  Similarity=0.119  Sum_probs=42.3

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhcc---CcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVRE---ADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~---aDivisA~g~p  221 (229)
                      ++.+||.|.+ |.+++..|.+.|.+|++++++.              .+..+..++   +|+||.++..+
T Consensus         2 ~Ig~IGlG~m-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~   70 (299)
T PRK12490          2 KLGLIGLGKM-GGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAG   70 (299)
T ss_pred             EEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCc
Confidence            6899999996 9999999999999999998742              244455555   69999998865

>PRK06545 prephenate dehydrogenase; Validated

Probab=94.97  E-value=0.056  Score=49.92  Aligned_cols=53  Identities=25%  Similarity=0.344  Sum_probs=41.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------------CCHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ++|.|||.|.+ |..++..|.+.|..|.+..+..                  .++.+.+++||+||.|++..
T Consensus         1 ~~I~iIG~Gli-G~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~   71 (359)
T PRK06545          1 RTVLIVGLGLI-GGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVD   71 (359)
T ss_pred             CeEEEEEeCHH-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHH
Confidence            47999999996 9999999999998777764421                  12345578999999998743

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=94.95  E-value=0.076  Score=48.24  Aligned_cols=37  Identities=22%  Similarity=0.257  Sum_probs=33.1

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .-+++|+|+|.|+++.+|..++..|+++|.+|+.+.+
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~   47 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDN   47 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence            4578899999999999999999999999999887754

>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.93  E-value=0.064  Score=50.76  Aligned_cols=56  Identities=18%  Similarity=0.228  Sum_probs=44.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---HH-----------hhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---PE-----------SIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---l~-----------~~~~~aDivisA~g~p  221 (229)
                      ++||+|.|+|-|.. |+++|.+|.++|++|++++.....   +.           +.+..+|+||-.-|.|
T Consensus         7 ~~~~~i~viG~G~~-G~~~a~~l~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~~~d~vv~sp~i~   76 (460)
T PRK01390          7 FAGKTVAVFGLGGS-GLATARALVAGGAEVIAWDDNPASRAKAAAAGITTADLRTADWSGFAALVLSPGVP   76 (460)
T ss_pred             cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEECCChhhHHHHHhcCccccCCChhHHcCCCEEEECCCCC
Confidence            57999999999997 999999999999999999864211   11           1245689998777765

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=94.92  E-value=0.077  Score=47.24  Aligned_cols=33  Identities=27%  Similarity=0.243  Sum_probs=29.9

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      .||+++|.|+++.+|+.++..|+++|+.|+++.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~   36 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATV   36 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEE
Confidence            489999999999999999999999999987653

>PRK09242 tropinone reductase; Provisional

Probab=94.92  E-value=0.033  Score=47.77  Aligned_cols=36  Identities=31%  Similarity=0.470  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .++||.++|.|++.-+|+.++..|.++|++|+++.+
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r   41 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVAR   41 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC
Confidence            578999999999988999999999999999988754

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.033  Score=47.87  Aligned_cols=37  Identities=19%  Similarity=0.361  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~   40 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD   40 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            4689999999998889999999999999999988653

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.91  E-value=0.05  Score=48.76  Aligned_cols=32  Identities=22%  Similarity=0.375  Sum_probs=28.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.|||.|.+ |.++|..|+..|..|++.+..
T Consensus         6 ~~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~   37 (286)
T PRK07819          6 QRVGVVGAGQM-GAGIAEVCARAGVDVLVFETT   37 (286)
T ss_pred             cEEEEEcccHH-HHHHHHHHHhCCCEEEEEECC
Confidence            48999999986 999999999999999998653

>PRK07035 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.034  Score=47.43  Aligned_cols=37  Identities=30%  Similarity=0.421  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++++|.|+|.|.|.-+|+.++..|.++|++|.++.+.
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~   41 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRK   41 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999888664

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=94.90  E-value=0.033  Score=47.98  Aligned_cols=36  Identities=19%  Similarity=0.368  Sum_probs=32.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERS   39 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            679999999999989999999999999999888664

>PRK09291 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.056  Score=46.05  Aligned_cols=33  Identities=21%  Similarity=0.228  Sum_probs=30.1

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +|+++|.|+++-+|+.++..|+++|++|+.+.+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r   34 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQ   34 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            688999999999999999999999999887755

>PRK05872 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.032  Score=49.46  Aligned_cols=37  Identities=24%  Similarity=0.353  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|.++|++|.++.+.
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~   42 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLE   42 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999887653

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=94.89  E-value=0.087  Score=48.17  Aligned_cols=55  Identities=20%  Similarity=0.358  Sum_probs=43.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC--------------------------CCHHhhhccCcEEEEec
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT--------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t--------------------------~~l~~~~~~aDivisA~  218 (229)
                      +.++|+|||+|. ||..++..|+..|. ++.+.+...                          .+. +.++.||+||.+.
T Consensus         5 ~~~KI~IIGaG~-vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~ta   82 (321)
T PTZ00082          5 KRRKISLIGSGN-IGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVTA   82 (321)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEECC
Confidence            447999999988 59999999998884 777765422                          133 5689999999999


Q ss_pred             CCCC
Q 027064          219 GQAM  222 (229)
Q Consensus       219 g~p~  222 (229)
                      |.|.
T Consensus        83 g~~~   86 (321)
T PTZ00082         83 GLTK   86 (321)
T ss_pred             CCCC
Confidence            9875

>PRK07060 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.035  Score=46.87  Aligned_cols=37  Identities=24%  Similarity=0.353  Sum_probs=33.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|.+..+|+.++..|+++|++|+++.+.
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~   42 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARN   42 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999998889999999999999999888653

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=94.88  E-value=0.063  Score=48.31  Aligned_cols=54  Identities=24%  Similarity=0.268  Sum_probs=43.0

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------------CH-HhhhccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------------DP-ESIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------------~l-~~~~~~aDivisA~g~p  221 (229)
                      -++|+|+|.|.+ |+.++..|..+|..|.++.+.-.                  +. .+....||+||.|++.+
T Consensus         3 ~~~v~IvG~Gli-G~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~   75 (279)
T COG0287           3 SMKVGIVGLGLM-GGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIE   75 (279)
T ss_pred             CcEEEEECCchH-HHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHH
Confidence            368999999996 99999999999999988865321                  11 45577789999999843

>PRK06194 hypothetical protein; Provisional

Probab=94.88  E-value=0.041  Score=47.97  Aligned_cols=37  Identities=19%  Similarity=0.283  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~   39 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ   39 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3578999999999999999999999999999887653

>PRK08264 short chain dehydrogenase; Validated

Probab=94.87  E-value=0.043  Score=46.31  Aligned_cols=57  Identities=25%  Similarity=0.308  Sum_probs=44.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCCC--------------------HHhhh---ccCcEEEEecC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTTD--------------------PESIV---READIVIAAAG  219 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~~--------------------l~~~~---~~aDivisA~g  219 (229)
                      ++.+|+++|.|.+.-+|+.++..|.++|+ +|+++.+....                    +.+.+   ...|+||.+.|
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   82 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG   82 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            35789999999999999999999999999 99988764321                    11222   24699999998


Q ss_pred             C
Q 027064          220 Q  220 (229)
Q Consensus       220 ~  220 (229)
                      .
T Consensus        83 ~   83 (238)
T PRK08264         83 I   83 (238)
T ss_pred             c
Confidence            7

>PRK08703 short chain dehydrogenase; Provisional

Probab=94.87  E-value=0.042  Score=46.60  Aligned_cols=37  Identities=35%  Similarity=0.395  Sum_probs=33.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|.+..+|+.++..|+++|++|+++.+.
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~   39 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARH   39 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence            4789999999999999999999999999999887654

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=94.86  E-value=0.064  Score=48.20  Aligned_cols=52  Identities=13%  Similarity=0.299  Sum_probs=42.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~p  221 (229)
                      +|.+||-|.+ |.+++..|.+.|..|+++++..             .+..+..++||+||.++..+
T Consensus         2 ~Ig~IGlG~M-G~~ma~~L~~~G~~v~v~~~~~~~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~   66 (292)
T PRK15059          2 KLGFIGLGIM-GTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDT   66 (292)
T ss_pred             eEEEEccCHH-HHHHHHHHHHCCCeEEEEeCCHhHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCh
Confidence            5899999996 9999999999999999887632             13446678999999998754

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=94.84  E-value=0.048  Score=46.93  Aligned_cols=36  Identities=28%  Similarity=0.349  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||+++|.|.+.-+|+.++..|.++|+.|.++.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~   39 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYR   39 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            478999999999999999999999999999887755

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.82  E-value=0.051  Score=42.87  Aligned_cols=32  Identities=25%  Similarity=0.514  Sum_probs=27.9

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .++|+|+|.|.+ |-.++..|...|. .+++++.
T Consensus         2 ~~~v~iiG~G~v-Gs~va~~L~~~Gv~~i~lvD~   34 (135)
T PF00899_consen    2 NKRVLIIGAGGV-GSEVAKNLARSGVGKITLVDD   34 (135)
T ss_dssp             T-EEEEESTSHH-HHHHHHHHHHHTTSEEEEEES
T ss_pred             CCEEEEECcCHH-HHHHHHHHHHhCCCceeecCC
Confidence            579999999995 9999999999999 7888865

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.81  E-value=0.05  Score=47.05  Aligned_cols=35  Identities=29%  Similarity=0.501  Sum_probs=30.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .++.++|+|+|.|++ |-.++..|...|. ++++++.
T Consensus        18 ~L~~~~VlivG~Ggl-Gs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          18 KLKNARVLVVGAGGL-GSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             HHhCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence            467899999999995 9999999999998 6777743

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.80  E-value=0.036  Score=48.67  Aligned_cols=37  Identities=22%  Similarity=0.342  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~   39 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVD   39 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            3689999999999999999999999999999887653

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.79  E-value=0.084  Score=47.34  Aligned_cols=53  Identities=25%  Similarity=0.372  Sum_probs=41.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------------CHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------------~l~~~~~~aDivisA~g~  220 (229)
                      ++|.|||+|. ||..++..|...|. +|.+.+....                          +. +.++.||+||.+.|.
T Consensus         3 ~KI~VIGaG~-vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~   80 (307)
T PRK06223          3 KKISIIGAGN-VGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV   80 (307)
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence            5899999977 59999999998764 8888865221                          22 447899999999998


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      |.
T Consensus        81 p~   82 (307)
T PRK06223         81 PR   82 (307)
T ss_pred             CC
Confidence            75

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=94.79  E-value=0.075  Score=46.78  Aligned_cols=54  Identities=26%  Similarity=0.393  Sum_probs=41.6

Q ss_pred             EEEEccchhhhHHHHHHHhhCC----CEEEEEcCC-------------------------CCCHHhhhccCcEEEEecCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKAD----ATVTIVHSH-------------------------TTDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~----atVtv~~~~-------------------------t~~l~~~~~~aDivisA~g~  220 (229)
                      ++|||+|+.+|..++..|+..+    ..+.+.+..                         |.|+++.+++||+||.+.|.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799995568999999998888    467776542                         12446778999999999998


Q ss_pred             CCC
Q 027064          221 AMM  223 (229)
Q Consensus       221 p~~  223 (229)
                      |..
T Consensus        81 ~~~   83 (263)
T cd00650          81 GRK   83 (263)
T ss_pred             CCC
Confidence            765

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.79  E-value=0.04  Score=48.82  Aligned_cols=31  Identities=19%  Similarity=0.283  Sum_probs=28.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++|.|||.|.+ |.+++..|+..|..|++++.
T Consensus         4 ~kI~VIG~G~m-G~~ia~~la~~g~~V~~~d~   34 (282)
T PRK05808          4 QKIGVIGAGTM-GNGIAQVCAVAGYDVVMVDI   34 (282)
T ss_pred             cEEEEEccCHH-HHHHHHHHHHCCCceEEEeC
Confidence            58999999995 99999999999999999873

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.78  E-value=0.087  Score=50.53  Aligned_cols=56  Identities=16%  Similarity=0.361  Sum_probs=43.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C-C---HH---------------hhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T-D---PE---------------SIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~-~---l~---------------~~~~~aDivisA~g~p  221 (229)
                      +.+|+|.|+|-|.. |+++|.+|.++|+.|+..++.. . .   +.               +.+..+|+||...|.|
T Consensus         5 ~~~~~i~v~G~G~s-G~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~d~vv~sp~I~   80 (498)
T PRK02006          5 LQGPMVLVLGLGES-GLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFVGGPFDPALLDGVDLVALSPGLS   80 (498)
T ss_pred             cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEEeCCCchhHhcCCCEEEECCCCC
Confidence            46899999999997 9999999999999999998642 1 1   21               1234688888877755

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.76  E-value=0.039  Score=46.60  Aligned_cols=36  Identities=25%  Similarity=0.413  Sum_probs=32.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.+|+++|.|++..+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~   39 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC   39 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            578999999999999999999999999999887654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.75  E-value=0.047  Score=45.96  Aligned_cols=37  Identities=35%  Similarity=0.464  Sum_probs=32.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE-cCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV-HSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~-~~~  200 (229)
                      ++.+|+++|+|.+.-+|+.++..|+++|++|++. .+.
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~   39 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDIN   39 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            4678999999999889999999999999998887 553

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.75  E-value=0.1  Score=46.48  Aligned_cols=34  Identities=29%  Similarity=0.201  Sum_probs=30.6

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      ..||+|+|.|+++.+|..++..|+++|++|+.+.
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~   36 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATV   36 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            3689999999999999999999999999988653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.74  E-value=0.051  Score=46.77  Aligned_cols=36  Identities=28%  Similarity=0.354  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||.++|.|++.-+|+.++..|.++|++|.++.+
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~   40 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGV   40 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence            478999999999999999999999999999988755

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.73  E-value=0.052  Score=45.46  Aligned_cols=36  Identities=36%  Similarity=0.502  Sum_probs=32.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.+|+++|.|+++-+|+.++..|.++|++|+++.+.
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~   38 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSN   38 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            568999999999999999999999999999888764

>PRK08589 short chain dehydrogenase; Validated

Probab=94.73  E-value=0.046  Score=47.65  Aligned_cols=37  Identities=27%  Similarity=0.326  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~   39 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA   39 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence            3679999999999989999999999999999988654

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.72  E-value=0.11  Score=45.62  Aligned_cols=49  Identities=29%  Similarity=0.478  Sum_probs=36.6

Q ss_pred             cCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEc
Q 027064          148 PCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVH  198 (229)
Q Consensus       148 PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~  198 (229)
                      +|....++..+++.+. ..|.+|+|+|.|. +|..+++++...|++ |+++.
T Consensus       103 ~~~~~ta~~al~~~~~-~~g~~VlV~G~G~-vG~~~~~~ak~~G~~~Vi~~~  152 (280)
T TIGR03366       103 GCATATVMAALEAAGD-LKGRRVLVVGAGM-LGLTAAAAAAAAGAARVVAAD  152 (280)
T ss_pred             hhHHHHHHHHHHhccC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEC
Confidence            4444444555555543 3799999999976 699999999999997 77764

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=94.72  E-value=0.086  Score=47.77  Aligned_cols=60  Identities=22%  Similarity=0.173  Sum_probs=46.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------C------HHhhhccCcEEEE
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------D------PESIVREADIVIA  216 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------~------l~~~~~~aDivis  216 (229)
                      .+-++++|+|.|.++.+|+.++..|+++|++|+++.+...                    |      +.+.++..|+||.
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   85 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFH   85 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            3457899999999999999999999999999987644211                    1      2234566899999


Q ss_pred             ecCCCC
Q 027064          217 AAGQAM  222 (229)
Q Consensus       217 A~g~p~  222 (229)
                      .++.++
T Consensus        86 ~A~~~~   91 (353)
T PLN02896         86 VAASME   91 (353)
T ss_pred             CCcccc
Confidence            988654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.70  E-value=0.042  Score=46.45  Aligned_cols=36  Identities=25%  Similarity=0.465  Sum_probs=32.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.++.++|.|.+..+|+.++..|+++|++|+++++.
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~   40 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLART   40 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            568999999999999999999999999999988764

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=94.68  E-value=0.11  Score=46.04  Aligned_cols=34  Identities=29%  Similarity=0.290  Sum_probs=30.3

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .||+|+|.|+++.+|+.++..|+++|.+|+++.+
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r   36 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVR   36 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEc
Confidence            4799999999999999999999999999876543

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.68  E-value=0.098  Score=52.01  Aligned_cols=34  Identities=24%  Similarity=0.403  Sum_probs=31.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      -.||+|+|||+|.. |...|..|.+.|+.|+++.+
T Consensus       325 ~~~~~VaIIGaGpA-GLsaA~~L~~~G~~V~V~E~  358 (654)
T PRK12769        325 KSDKRVAIIGAGPA-GLACADVLARNGVAVTVYDR  358 (654)
T ss_pred             cCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEec
Confidence            36999999999997 99999999999999999965

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.65  E-value=0.044  Score=47.63  Aligned_cols=38  Identities=32%  Similarity=0.506  Sum_probs=33.9

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~   43 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN   43 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999998889999999999999999988664

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=94.65  E-value=0.046  Score=46.85  Aligned_cols=36  Identities=28%  Similarity=0.380  Sum_probs=32.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.+|.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~   39 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIK   39 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCC
Confidence            678999999999999999999999999999887654

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=94.64  E-value=0.094  Score=45.09  Aligned_cols=54  Identities=20%  Similarity=0.272  Sum_probs=40.2

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCC---CE-EEEEcCCC----------------CCHHhhhccCcEEEEecCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKAD---AT-VTIVHSHT----------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~---at-Vtv~~~~t----------------~~l~~~~~~aDivisA~g~  220 (229)
                      +..+|.|||.|.+ |..++..|.+.+   .+ ++++++..                .+..+.+.++|+||.++..
T Consensus         3 ~~~kI~iIG~G~m-g~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~   76 (245)
T PRK07634          3 KKHRILFIGAGRM-AEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPP   76 (245)
T ss_pred             CCCeEEEECcCHH-HHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCH
Confidence            4578999999996 999999998775   23 66665421                1344667889999999874

>PRK05854 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.042  Score=49.32  Aligned_cols=36  Identities=39%  Similarity=0.469  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R   46 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVR   46 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            578999999999999999999999999999998765

>PRK07576 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.058  Score=46.81  Aligned_cols=37  Identities=27%  Similarity=0.427  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|..++..|+++|++|+++.+.
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~   42 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS   42 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999999999999999999999998763

>PRK06114 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.065  Score=45.97  Aligned_cols=37  Identities=24%  Similarity=0.388  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|.++|++|.++.+.
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~   41 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLR   41 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999988664

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.60  E-value=0.1  Score=49.11  Aligned_cols=56  Identities=20%  Similarity=0.279  Sum_probs=43.6

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C----CHHh---------------hhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T----DPES---------------IVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~----~l~~---------------~~~~aDivisA~g~p  221 (229)
                      +.||+++|+|.|.. |..+|.+|.++|+.|++.+... .    .+.+               .....|.||...|.|
T Consensus         3 ~~~~~~~v~G~g~~-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~~~~~~~d~vv~spgi~   78 (445)
T PRK04308          3 FQNKKILVAGLGGT-GISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKDALDNGFDILALSPGIS   78 (445)
T ss_pred             CCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCHHHHhCCCEEEECCCCC
Confidence            56899999999986 9999999999999999987542 1    1111               124689999988876

>PRK07478 short chain dehydrogenase; Provisional

Probab=94.58  E-value=0.048  Score=46.64  Aligned_cols=36  Identities=25%  Similarity=0.405  Sum_probs=32.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||.++|.|.|.-+|+.++..|.++|++|.++.+
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r   38 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR   38 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            367999999999999999999999999999888755

>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A

Probab=94.58  E-value=0.061  Score=44.29  Aligned_cols=36  Identities=42%  Similarity=0.580  Sum_probs=31.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+|+|||.|.. +--++..|++.|.+|+++.|+
T Consensus       164 ~~~~k~V~VVG~G~S-A~d~a~~l~~~g~~V~~~~R~  199 (203)
T PF13738_consen  164 DFKGKRVVVVGGGNS-AVDIAYALAKAGKSVTLVTRS  199 (203)
T ss_dssp             GCTTSEEEEE--SHH-HHHHHHHHTTTCSEEEEEESS
T ss_pred             hcCCCcEEEEcChHH-HHHHHHHHHhhCCEEEEEecC
Confidence            578999999999997 999999999999999999875

...

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.57  E-value=0.054  Score=46.18  Aligned_cols=36  Identities=36%  Similarity=0.522  Sum_probs=32.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||.++|.|.+..+|+.++..|+++|++|.++.+
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r   39 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADL   39 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC
Confidence            367999999999999999999999999999887754

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.56  E-value=0.11  Score=40.28  Aligned_cols=51  Identities=25%  Similarity=0.322  Sum_probs=35.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCC-CE-EEEEcCCC---CCHH-------------------hhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKAD-AT-VTIVHSHT---TDPE-------------------SIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~-at-Vtv~~~~t---~~l~-------------------~~~~~aDivisA~g  219 (229)
                      ||.|||+++.+|+-+..+|+++- +. +.++-++.   +.+.                   +.+.++|+||.|++
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCc
Confidence            68999988889999999999853 34 34443332   1111                   33688999999987

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=94.56  E-value=0.051  Score=49.33  Aligned_cols=59  Identities=31%  Similarity=0.471  Sum_probs=44.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEE----------------EcCCCC----------CHHhhhccCcEEEEe
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTI----------------VHSHTT----------DPESIVREADIVIAA  217 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv----------------~~~~t~----------~l~~~~~~aDivisA  217 (229)
                      .-.+.+|.|+|+++=+|.|++.+|. .+.-|+-                .|-.|+          .|++.++.||+||-.
T Consensus        25 ~~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP  103 (345)
T KOG1494|consen   25 SQRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP  103 (345)
T ss_pred             ccCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence            3468999999999999999998775 3333332                233332          588999999999999


Q ss_pred             cCCCCC
Q 027064          218 AGQAMM  223 (229)
Q Consensus       218 ~g~p~~  223 (229)
                      .|.|.-
T Consensus       104 AGVPRK  109 (345)
T KOG1494|consen  104 AGVPRK  109 (345)
T ss_pred             CCCCCC
Confidence            997764

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.56  E-value=0.071  Score=45.89  Aligned_cols=36  Identities=14%  Similarity=0.360  Sum_probs=31.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      .++.++|+|||.|++ |-+++..|...|. ++++++..
T Consensus        25 ~L~~~~V~ViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGAGGL-GSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence            467899999999995 9999999999998 58888554

>PRK07814 short chain dehydrogenase; Provisional

Probab=94.55  E-value=0.047  Score=47.19  Aligned_cols=37  Identities=27%  Similarity=0.365  Sum_probs=33.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|+.+|++|.++.+.
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~   43 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART   43 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999999999999999999999888653

>PRK06196 oxidoreductase; Provisional

Probab=94.55  E-value=0.048  Score=48.69  Aligned_cols=39  Identities=31%  Similarity=0.417  Sum_probs=34.9

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..++.||.|+|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~   59 (315)
T PRK06196         21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR   59 (315)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            456889999999999999999999999999999987654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.53  E-value=0.13  Score=43.60  Aligned_cols=34  Identities=26%  Similarity=0.372  Sum_probs=30.6

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      +.+++++|.|.+..+|+.++..|+++|+.|++..
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~   37 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNA   37 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence            5689999999999999999999999999987654

>PRK06500 short chain dehydrogenase; Provisional

Probab=94.53  E-value=0.052  Score=45.96  Aligned_cols=35  Identities=29%  Similarity=0.472  Sum_probs=31.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +.||+++|.|++.-+|+.++..|+++|++|++..+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r   38 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGR   38 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence            57899999999999999999999999999887754

>PRK07825 short chain dehydrogenase; Provisional

Probab=94.52  E-value=0.045  Score=47.43  Aligned_cols=36  Identities=25%  Similarity=0.347  Sum_probs=32.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++|+.++|.|+|.-+|+.++..|.++|++|.++.+
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r   37 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDL   37 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEEC
Confidence            467999999999999999999999999999988755

>PLN00198 anthocyanidin reductase; Provisional

Probab=94.50  E-value=0.16  Score=45.67  Aligned_cols=35  Identities=23%  Similarity=0.272  Sum_probs=31.5

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      .+.++++|+|.|+++.+|+.++..|+++|++|+++
T Consensus         5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~   39 (338)
T PLN00198          5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTT   39 (338)
T ss_pred             cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEE
Confidence            35679999999999999999999999999998755

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.49  E-value=0.088  Score=49.07  Aligned_cols=39  Identities=23%  Similarity=0.226  Sum_probs=33.8

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .....|++|+|+|+++.+|+.++..|+++|+.|+.+.+.
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~   93 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE   93 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence            345689999999999999999999999999998877553

>PRK12939 short chain dehydrogenase; Provisional

Probab=94.49  E-value=0.054  Score=45.78  Aligned_cols=36  Identities=33%  Similarity=0.442  Sum_probs=32.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .++||+++|.|++.-+|+.++..|.++|++|.++.+
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r   39 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDG   39 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeC
Confidence            357899999999888999999999999999887754

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=94.47  E-value=0.083  Score=47.79  Aligned_cols=31  Identities=32%  Similarity=0.379  Sum_probs=28.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+|+|||.|.+ |.++|..|.+.|.+|+++.+
T Consensus         3 mkI~IiG~G~m-G~~~A~~L~~~G~~V~~~~r   33 (341)
T PRK08229          3 ARICVLGAGSI-GCYLGGRLAAAGADVTLIGR   33 (341)
T ss_pred             ceEEEECCCHH-HHHHHHHHHhcCCcEEEEec
Confidence            47999999995 99999999999999999866

>PRK10423 transcriptional repressor RbsR; Provisional

Probab=94.47  E-value=1.2  Score=39.17  Aligned_cols=89  Identities=17%  Similarity=0.264  Sum_probs=58.1

Q ss_pred             hhcccHH-HHHHHHHHHHHHHHHHHhcCCCCC-------------eEEEEEEC-CCcccHHHHHHHHHHHHHcCCeeeee
Q 027064           10 TIIDGKA-VAQTIRSEIAEEVRLLSEKYGKVP-------------GLAVVIVG-GRKDSQSYVSMKRKACAEVGIKSFDI   74 (229)
Q Consensus        10 ~il~G~~-la~~i~~~i~~~~~~l~~~~~~~P-------------~LaiI~vg-~~~~s~~Y~~~k~k~a~~~Gi~~~~~   74 (229)
                      +.|+|+. ++++.++++.+.++++    |..|             .+++|.-. +++--..+.+...+.|++.|..+.+.
T Consensus        17 rvLn~~~~vs~~tr~rV~~~a~~l----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~   92 (327)
T PRK10423         17 HVINKDRFVSEAITAKVEAAIKEL----NYAPSALARSLKLNQTRTIGMLITASTNPFYSELVRGVERSCFERGYSLVLC   92 (327)
T ss_pred             HHhCCCCCCCHHHHHHHHHHHHHH----CCCccHHHHHHhhCCCCeEEEEeCCCCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence            5788775 7777777777766655    4444             45555432 23444556778889999999987765


Q ss_pred             cCCCCCCHHHHHHHHHHhcCCCCCcEEEEeC
Q 027064           75 DLPEQVSEAELISKVHELNVMPDVHGILVQL  105 (229)
Q Consensus        75 ~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~  105 (229)
                      ...  -+.++..+.++.+... +|+|+++.-
T Consensus        93 ~~~--~~~~~~~~~~~~l~~~-~vdGiI~~~  120 (327)
T PRK10423         93 NTE--GDEQRMNRNLETLMQK-RVDGLLLLC  120 (327)
T ss_pred             eCC--CCHHHHHHHHHHHHHc-CCCEEEEeC
Confidence            433  2344445666666543 699999963

>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.44  E-value=0.11  Score=49.52  Aligned_cols=54  Identities=17%  Similarity=0.215  Sum_probs=42.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH----------------hhhccCcEEEEecCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE----------------SIVREADIVIAAAGQA  221 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~----------------~~~~~aDivisA~g~p  221 (229)
                      .||+|+|+|.|.. |+.++.+|. +|+.|++.+.+.....                +.+.++|.||..-|.|
T Consensus         5 ~~~~v~v~G~G~s-G~a~~~~L~-~g~~v~v~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vV~SPgI~   74 (454)
T PRK01368          5 TKQKIGVFGLGKT-GISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNAIAALSDSRWQNLDKIVLSPGIP   74 (454)
T ss_pred             CCCEEEEEeecHH-HHHHHHHHh-CCCEEEEECCCCCchHHHHhhhcCceeccCChhHhhCCCEEEECCCCC
Confidence            5899999999997 999999999 5999999986532211                2244689888887766

>PRK12742 oxidoreductase; Provisional

Probab=94.44  E-value=0.075  Score=44.70  Aligned_cols=35  Identities=23%  Similarity=0.382  Sum_probs=31.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      ++.||+++|.|++.-+|+.++..|+++|++|.++.
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~   37 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTY   37 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEec
Confidence            36799999999988899999999999999987653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.43  E-value=0.076  Score=44.52  Aligned_cols=37  Identities=30%  Similarity=0.371  Sum_probs=32.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++|+++|.|.++-+|+.++..|+++|++|+++-++
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~   38 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS   38 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4678999999999999999999999999998776443

>PLN02427 UDP-apiose/xylose synthase

Probab=94.43  E-value=0.11  Score=47.74  Aligned_cols=60  Identities=20%  Similarity=0.289  Sum_probs=45.4

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCCCC----------------------------CHHhhhccCc
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSHTT----------------------------DPESIVREAD  212 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~t~----------------------------~l~~~~~~aD  212 (229)
                      +.+++.++|+|.|+++.+|+.++..|+++ |..|..+.+...                            .+.+.++.+|
T Consensus         9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d   88 (386)
T PLN02427          9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD   88 (386)
T ss_pred             CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence            45567789999999999999999999998 588887764211                            1234566789


Q ss_pred             EEEEecCCC
Q 027064          213 IVIAAAGQA  221 (229)
Q Consensus       213 ivisA~g~p  221 (229)
                      +||...+.+
T Consensus        89 ~ViHlAa~~   97 (386)
T PLN02427         89 LTINLAAIC   97 (386)
T ss_pred             EEEEccccc
Confidence            999887743

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.41  E-value=0.054  Score=45.76  Aligned_cols=36  Identities=19%  Similarity=0.340  Sum_probs=32.2

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|++++|.|.+.-+|..++..|.++|++|+++.+.
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~   38 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN   38 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            679999999998888999999999999998887653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.40  E-value=0.053  Score=45.63  Aligned_cols=37  Identities=32%  Similarity=0.515  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.||+++|.|.+.-+|..++..|.++|++|+...+.
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~   38 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRN   38 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            3679999999999999999999999999999887653

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=94.40  E-value=0.19  Score=46.54  Aligned_cols=78  Identities=24%  Similarity=0.315  Sum_probs=54.5

Q ss_pred             cccCCHHHHHHHHHHhC------CCCCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCC-C----------------
Q 027064          146 FLPCTPKGCLELLKRSG------VTIKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSH-T----------------  201 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~------~~l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~-t----------------  201 (229)
                      -+|+++.-.++-|-+..      ---.|+.|+|.|+|.-||..+.+++...| +.|+.+-|. +                
T Consensus       131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~  210 (347)
T KOG1198|consen  131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYK  210 (347)
T ss_pred             cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCC
Confidence            34665555555555554      34479999999999999999999999999 555444332 2                


Q ss_pred             -CCHHhhhcc-----CcEEEEecCCCCC
Q 027064          202 -TDPESIVRE-----ADIVIAAAGQAMM  223 (229)
Q Consensus       202 -~~l~~~~~~-----aDivisA~g~p~~  223 (229)
                       .+..+.++.     -|+|+.++|.+.+
T Consensus       211 ~~~~~e~~kk~~~~~~DvVlD~vg~~~~  238 (347)
T KOG1198|consen  211 DENVVELIKKYTGKGVDVVLDCVGGSTL  238 (347)
T ss_pred             CHHHHHHHHhhcCCCccEEEECCCCCcc
Confidence             133344555     7999999998754

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=94.37  E-value=0.07  Score=45.72  Aligned_cols=37  Identities=30%  Similarity=0.359  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||.++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~   41 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS   41 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence            3689999999999999999999999999999988653

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.37  E-value=0.059  Score=48.05  Aligned_cols=39  Identities=38%  Similarity=0.472  Sum_probs=35.7

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ..+.||.++|-|+|.-+|+.+|.+|.+.||+|++|.++.
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~   42 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSE   42 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence            358999999999999999999999999999999997754

>PRK12937 short chain dehydrogenase; Provisional

Probab=94.36  E-value=0.078  Score=44.73  Aligned_cols=36  Identities=25%  Similarity=0.305  Sum_probs=32.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+.||+++|.|.+.-+|+.++..|.++|++|+++.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~   37 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYA   37 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence            467999999999999999999999999999887654

>PRK08818 prephenate dehydrogenase; Provisional

Probab=94.34  E-value=0.14  Score=48.00  Aligned_cols=56  Identities=20%  Similarity=0.229  Sum_probs=44.5

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCC---CCCHHhhhccCcEEEEecCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSH---TTDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~---t~~l~~~~~~aDivisA~g~p  221 (229)
                      .-.+|+|||-++.+|..++..|.++ +.+|+.+++.   +.+..+.+++||+||.|++..
T Consensus         3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~~~~~~~~v~~aDlVilavPv~   62 (370)
T PRK08818          3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPGSLDPATLLQRADVLIFSAPIR   62 (370)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccccCCHHHHhcCCCEEEEeCCHH
Confidence            3468999999444699999999975 7789888653   345677899999999999843

>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional

Probab=94.33  E-value=0.097  Score=54.50  Aligned_cols=35  Identities=26%  Similarity=0.245  Sum_probs=32.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -.||+|+|||+|.. |...|..|.++|..||+..+.
T Consensus       304 ~~gkkVaVIGsGPA-GLsaA~~Lar~G~~VtVfE~~  338 (944)
T PRK12779        304 AVKPPIAVVGSGPS-GLINAYLLAVEGFPVTVFEAF  338 (944)
T ss_pred             CCCCeEEEECCCHH-HHHHHHHHHHCCCeEEEEeeC
Confidence            36999999999998 999999999999999999663

>PRK12827 short chain dehydrogenase; Provisional

Probab=94.31  E-value=0.082  Score=44.54  Aligned_cols=36  Identities=19%  Similarity=0.395  Sum_probs=31.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++.+|+++|.|++..+|+.++..|.++|++|++..+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~   38 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI   38 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence            357899999999999999999999999999887543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=94.31  E-value=0.099  Score=48.19  Aligned_cols=56  Identities=13%  Similarity=0.141  Sum_probs=43.8

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------C------HHhhhccCcEEEEecCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------D------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~------l~~~~~~aDivisA~g~p  221 (229)
                      ++|+|+|.|.++.||+.++..|.++|..|+.+.+...               |      +...++.+|+||...+..
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~   96 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADM   96 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccccc
Confidence            6799999999999999999999999999988764211               1      123356789999988644

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.31  E-value=0.068  Score=49.72  Aligned_cols=36  Identities=28%  Similarity=0.500  Sum_probs=31.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      .+++++|+|+|.|++ |.+++..|...|. ++++++..
T Consensus       132 ~l~~~~VlvvG~GG~-Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIGAGGL-GSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEECCCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence            467899999999995 9999999999998 78888664

>PRK09135 pteridine reductase; Provisional

Probab=94.30  E-value=0.077  Score=44.69  Aligned_cols=36  Identities=22%  Similarity=0.237  Sum_probs=32.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..+++++|.|++..+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~   39 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR   39 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            467999999999999999999999999999988654

>PRK06139 short chain dehydrogenase; Provisional

Probab=94.27  E-value=0.049  Score=49.65  Aligned_cols=37  Identities=16%  Similarity=0.305  Sum_probs=33.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.+|.++|.|+|.-+|+.++..|.++|++|.++.+.
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~   40 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARD   40 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4679999999999889999999999999999988653

>PRK08643 acetoin reductase; Validated

Probab=94.25  E-value=0.062  Score=45.93  Aligned_cols=34  Identities=26%  Similarity=0.387  Sum_probs=31.1

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~   35 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN   35 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            7899999999999999999999999999887653

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.22  E-value=0.06  Score=46.63  Aligned_cols=36  Identities=28%  Similarity=0.338  Sum_probs=32.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++++|+++|.|.+.-+|+.++..|.++|++|+++.+
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r   39 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGR   39 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC
Confidence            468999999999888999999999999999988755

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=94.22  E-value=0.071  Score=51.74  Aligned_cols=32  Identities=16%  Similarity=0.252  Sum_probs=29.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.|||.|.+ |.++|..|+..|..|++.++.
T Consensus         6 ~kV~VIGaG~M-G~gIA~~la~aG~~V~l~d~~   37 (503)
T TIGR02279         6 VTVAVIGAGAM-GAGIAQVAASAGHQVLLYDIR   37 (503)
T ss_pred             cEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence            68999999996 999999999999999998764

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.22  E-value=0.081  Score=44.78  Aligned_cols=35  Identities=23%  Similarity=0.300  Sum_probs=31.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++||+++|.|++..+|+.++..|+++|++|.+..+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r   35 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL   35 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC
Confidence            46899999999999999999999999999987754

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.21  E-value=0.088  Score=48.75  Aligned_cols=36  Identities=25%  Similarity=0.463  Sum_probs=31.0

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      -.+++++|+|||.|++ |-+++..|...|. ++++++.
T Consensus        24 ~~L~~~~VlivG~GGl-Gs~~a~~La~~Gvg~i~lvD~   60 (355)
T PRK05597         24 QSLFDAKVAVIGAGGL-GSPALLYLAGAGVGHITIIDD   60 (355)
T ss_pred             HHHhCCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence            3467899999999995 9999999999988 7888755

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.20  E-value=0.085  Score=49.24  Aligned_cols=36  Identities=25%  Similarity=0.483  Sum_probs=31.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      -.+++++|+|||.|++ |.+++..|...|. ++++++.
T Consensus        37 ~~l~~~~VliiG~Ggl-G~~v~~~La~~Gvg~i~ivD~   73 (370)
T PRK05600         37 ERLHNARVLVIGAGGL-GCPAMQSLASAGVGTITLIDD   73 (370)
T ss_pred             HHhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEeC
Confidence            3578899999999995 9999999999997 8888855

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.20  E-value=0.14  Score=46.72  Aligned_cols=55  Identities=22%  Similarity=0.375  Sum_probs=40.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      .+|.|||+|. ||..+|..|..+|.  .+.+++....                        .-.+.++.|||||.+.|.|
T Consensus         4 ~Ki~IiGaG~-VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvitaG~~   82 (312)
T cd05293           4 NKVTVVGVGQ-VGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVTAGAR   82 (312)
T ss_pred             CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEECCCCC
Confidence            5899999977 69999999988776  4666654221                        1124589999999999986


Q ss_pred             CC
Q 027064          222 MM  223 (229)
Q Consensus       222 ~~  223 (229)
                      .-
T Consensus        83 ~k   84 (312)
T cd05293          83 QN   84 (312)
T ss_pred             CC
Confidence            53

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08226 short chain dehydrogenase; Provisional

Probab=94.18  E-value=0.084  Score=45.28  Aligned_cols=36  Identities=17%  Similarity=0.361  Sum_probs=32.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.||+++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~   39 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDIS   39 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence            578999999999999999999999999999888654

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=94.17  E-value=0.075  Score=51.58  Aligned_cols=32  Identities=19%  Similarity=0.336  Sum_probs=29.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.|||.|.+ |.++|..|+..|..|++.++.
T Consensus         8 ~~V~VIGaG~M-G~gIA~~la~aG~~V~l~D~~   39 (507)
T PRK08268          8 ATVAVIGAGAM-GAGIAQVAAQAGHTVLLYDAR   39 (507)
T ss_pred             CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence            78999999986 999999999999999998763

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=94.17  E-value=0.12  Score=47.08  Aligned_cols=54  Identities=22%  Similarity=0.346  Sum_probs=39.9

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-------------------------CHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      +|.|||+|. ||.++|.+|+.++.  .+.+.+....                         +-.+.++.|||||.+.|.|
T Consensus         1 Ki~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~~   79 (307)
T cd05290           1 KLVVIGAGH-VGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPS   79 (307)
T ss_pred             CEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCCC
Confidence            589999988 69999999987765  4555543210                         1236699999999999986


Q ss_pred             CC
Q 027064          222 MM  223 (229)
Q Consensus       222 ~~  223 (229)
                      .-
T Consensus        80 ~k   81 (307)
T cd05290          80 ID   81 (307)
T ss_pred             CC
Confidence            43

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=94.16  E-value=0.11  Score=44.50  Aligned_cols=54  Identities=26%  Similarity=0.282  Sum_probs=42.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C------------C------HHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T------------D------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~------------~------l~~~~~~aDivisA~g~p  221 (229)
                      +++.|||+|+-+|.-++.-+..||..||-.-+.. +            |      +.+.+..-|+||+|.|.+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~   73 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG   73 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence            4789999999999999999999999988764421 1            1      224567779999998865

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=94.15  E-value=0.14  Score=46.37  Aligned_cols=132  Identities=17%  Similarity=0.186  Sum_probs=83.3

Q ss_pred             CCcEEEEeCCCCC-CC------CHHHHHhcCCcc----CcccccCccch--hhhhccC----------CCCCcccCCHHH
Q 027064           97 DVHGILVQLPLPK-HI------NEEKVLGEISLE----KDVDGFHPLNI--GKLAMKG----------RDPLFLPCTPKG  153 (229)
Q Consensus        97 ~v~GIlvq~Plp~-~i------~~~~i~~~I~p~----KDVDg~~~~N~--g~l~~~~----------~~~~~~PcTa~a  153 (229)
                      -+.|+++..||-+ .+      -.++++++..-.    -||-|+.....  |++-.+.          .-..+-.-|+++
T Consensus        70 vieg~l~~~pllpe~~~s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFssIVgn~~~n~q~~~~e~t~~~~ttgns~Taya  149 (351)
T COG5322          70 VIEGYLVESPLLPEMLRSRPKAATRRVLNAMALAQKLGADVTGLGGFSSIVGNLGQNVQVRNVELTFTRFTTGNSHTAYA  149 (351)
T ss_pred             EEEEEEEccccCHHHHhhCHHHHHHHHHHHHHHHHHcCCeEEeecchhhhhccccccccccceEEEEEecccCCccchHH
Confidence            3788999998742 11      234555555442    36666654331  1111110          001222346665


Q ss_pred             HHH----HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhh
Q 027064          154 CLE----LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIV  208 (229)
Q Consensus       154 v~~----lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~  208 (229)
                      +.+    -.++.|++++...|.|+|+-+.+|-.++..|..+++...+.++.+.                     .-.+++
T Consensus       150 a~r~Vl~~~~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~  229 (351)
T COG5322         150 ACRQVLKHFAQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALP  229 (351)
T ss_pred             HHHHHHHHHHHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeecccccc
Confidence            443    3445699999999999999999999999999999998888886431                     112556


Q ss_pred             ccCcEEEEecCCCCC-CCCCC
Q 027064          209 READIVIAAAGQAMM-VTMGI  228 (229)
Q Consensus       209 ~~aDivisA~g~p~~-i~~~~  228 (229)
                      ..+|+|.+|+-.++. |.+.+
T Consensus       230 ~e~i~v~vAs~~~g~~I~pq~  250 (351)
T COG5322         230 QEDILVWVASMPKGVEIFPQH  250 (351)
T ss_pred             ccceEEEEeecCCCceechhh
Confidence            677888888877766 44443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.11  E-value=0.089  Score=44.61  Aligned_cols=35  Identities=20%  Similarity=0.283  Sum_probs=31.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +.+|+++|.|++.-+|+.++..|+++|++|.++.+
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~   37 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH   37 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence            57899999999999999999999999999887643

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.11  E-value=0.085  Score=47.12  Aligned_cols=39  Identities=31%  Similarity=0.331  Sum_probs=34.9

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..+++||.++|.|.|.-+|+.++..|.++|++|.++.+.
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~   45 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA   45 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence            357899999999999999999999999999999887653

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.09  E-value=0.086  Score=46.03  Aligned_cols=37  Identities=24%  Similarity=0.444  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.||+++|.|++.-+|+.++..|.++|++|.++.+.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKT   39 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            3679999999999999999999999999999887653

>cd00704 MDH Malate dehydrogenase

Probab=94.08  E-value=0.15  Score=46.77  Aligned_cols=55  Identities=16%  Similarity=0.379  Sum_probs=40.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC-------EEEEEcCCC--------------------------CCHHhhhccCcEEE
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA-------TVTIVHSHT--------------------------TDPESIVREADIVI  215 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a-------tVtv~~~~t--------------------------~~l~~~~~~aDivi  215 (229)
                      +|+|+|+++.||..++..|...+.       .+.+.+...                          .+..+.++.||+||
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV   81 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI   81 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence            799999966689999999987553       255554322                          12346789999999


Q ss_pred             EecCCCCC
Q 027064          216 AAAGQAMM  223 (229)
Q Consensus       216 sA~g~p~~  223 (229)
                      .+.|.|.-
T Consensus        82 itAG~~~~   89 (323)
T cd00704          82 LVGAFPRK   89 (323)
T ss_pred             EeCCCCCC
Confidence            99998753

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06198 short chain dehydrogenase; Provisional

Probab=94.08  E-value=0.068  Score=45.68  Aligned_cols=37  Identities=22%  Similarity=0.362  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~  200 (229)
                      .+++|+++|.|++.-+|+.++..|.++|+. |+++.+.
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~   40 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRN   40 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCC
Confidence            368999999999999999999999999998 8888664

>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.07  E-value=0.15  Score=47.84  Aligned_cols=54  Identities=22%  Similarity=0.285  Sum_probs=42.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH--------------HhhhccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP--------------ESIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l--------------~~~~~~aDivisA~g~p  221 (229)
                      .++|+|||-|.+ |..+|.+|.++|++|+.++.....+              ......+|++|...|.+
T Consensus         3 ~~~i~iiGlG~~-G~slA~~l~~~G~~V~g~D~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvV~s~gi~   70 (418)
T PRK00683          3 LQRVVVLGLGVT-GKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAEEFPEQVDLVVRSPGIK   70 (418)
T ss_pred             CCeEEEEEECHH-HHHHHHHHHHCCCEEEEEeCCccccchhHHHhhhhcCCcHHHhcCCCEEEECCCCC
Confidence            478999999997 9999999999999999987643211              11235689999888866

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.07  E-value=0.13  Score=44.74  Aligned_cols=35  Identities=17%  Similarity=0.072  Sum_probs=31.4

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .||.++|.|++.-+|+.++..|.++|+.|+++.+.
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~   36 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARD   36 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            47899999999999999999999999999887653

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=94.06  E-value=0.11  Score=37.10  Aligned_cols=32  Identities=28%  Similarity=0.455  Sum_probs=29.3

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++|||.|.+ |--+|..|.+.|..|+++++..
T Consensus         1 ~vvViGgG~i-g~E~A~~l~~~g~~vtli~~~~   32 (80)
T PF00070_consen    1 RVVVIGGGFI-GIELAEALAELGKEVTLIERSD   32 (80)
T ss_dssp             EEEEESSSHH-HHHHHHHHHHTTSEEEEEESSS
T ss_pred             CEEEECcCHH-HHHHHHHHHHhCcEEEEEeccc
Confidence            6899999995 9999999999999999998864

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.06  E-value=0.14  Score=48.72  Aligned_cols=51  Identities=20%  Similarity=0.287  Sum_probs=40.7

Q ss_pred             eEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCCC---------------CHHhhhccCcEEEEecCC
Q 027064          169 RAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHTT---------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       169 ~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~l~~~~~~aDivisA~g~  220 (229)
                      ++.||| .|. +|..++..|.+.|..|+++.+...               +..+.+.+||+||.|++.
T Consensus         2 kI~IIGG~G~-mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~   68 (437)
T PRK08655          2 KISIIGGTGG-LGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPI   68 (437)
T ss_pred             EEEEEecCCH-HHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCH
Confidence            689998 466 599999999999999998876421               344567889999999874

>PLN02778 3,5-epimerase/4-reductase

Probab=94.06  E-value=0.18  Score=45.04  Aligned_cols=56  Identities=14%  Similarity=0.144  Sum_probs=42.4

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---HHhhhc--cCcEEEEecCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---PESIVR--EADIVIAAAGQAM  222 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---l~~~~~--~aDivisA~g~p~  222 (229)
                      .++|+|.|+++.+|..++..|.++|.+|+.....-.+   +...++  +.|+||.++|..+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~   69 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTG   69 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            5899999999999999999999999998765433222   222333  5799998887543

>PRK07326 short chain dehydrogenase; Provisional

Probab=94.04  E-value=0.094  Score=44.10  Aligned_cols=35  Identities=31%  Similarity=0.477  Sum_probs=31.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +.|+.++|+|+++-+|+.++..|+++|++|+++.+
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r   38 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITAR   38 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeC
Confidence            46899999999999999999999999999998865

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=94.04  E-value=0.12  Score=45.58  Aligned_cols=54  Identities=22%  Similarity=0.302  Sum_probs=42.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~p  221 (229)
                      ++++|.|.++.+|+.++..|.++|++|+.+.+...                     ++.+.++..|+||...+..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            47999999999999999999999999988765421                     1234566789999887643

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02214 cinnamoyl-CoA reductase

Probab=94.03  E-value=0.16  Score=46.20  Aligned_cols=35  Identities=23%  Similarity=0.205  Sum_probs=31.2

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++|+|+|.|+++.+|+.++..|+++|+.|+.+.+
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r   42 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVR   42 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            57899999999999999999999999999877644

>PRK07806 short chain dehydrogenase; Provisional

Probab=93.99  E-value=0.099  Score=44.35  Aligned_cols=36  Identities=31%  Similarity=0.397  Sum_probs=32.2

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~   39 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ   39 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            679999999998889999999999999999887553

>PRK07577 short chain dehydrogenase; Provisional

Probab=93.99  E-value=0.1  Score=43.75  Aligned_cols=35  Identities=23%  Similarity=0.323  Sum_probs=32.0

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .||+++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~   36 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS   36 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            57999999999999999999999999999888664

>PRK06181 short chain dehydrogenase; Provisional

Probab=93.96  E-value=0.13  Score=44.16  Aligned_cols=34  Identities=24%  Similarity=0.435  Sum_probs=30.4

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~   34 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARN   34 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999988664

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=93.95  E-value=0.13  Score=43.00  Aligned_cols=52  Identities=23%  Similarity=0.399  Sum_probs=40.1

Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC----------------------HHhhhccC--cEEEEecCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD----------------------PESIVREA--DIVIAAAGQA  221 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~----------------------l~~~~~~a--DivisA~g~p  221 (229)
                      |+|+|+++.||..++..|+++|.+|+...+.+..                      +.+.++..  |.||-+.+.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence            7899999999999999999999998766554321                      22445555  8888888765

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.91  E-value=0.093  Score=45.27  Aligned_cols=35  Identities=23%  Similarity=0.315  Sum_probs=30.9

Q ss_pred             CCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++||.++|.|+|  .-+|+.++..|+++|++|+++.+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r   41 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQ   41 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecC
Confidence            689999999997  34699999999999999998854

>PRK09620 hypothetical protein; Provisional

Probab=93.89  E-value=0.19  Score=43.84  Aligned_cols=60  Identities=28%  Similarity=0.398  Sum_probs=45.1

Q ss_pred             CCCCeEEEEccc----------------hhhhHHHHHHHhhCCCEEEEEcCCCC-------------------CH----H
Q 027064          165 IKGKRAVVVGRS----------------NIVGLPVSLLLLKADATVTIVHSHTT-------------------DP----E  205 (229)
Q Consensus       165 l~gk~v~ViG~s----------------~~VG~pla~~L~~~~atVtv~~~~t~-------------------~l----~  205 (229)
                      ++||+|+|-+.+                +.+|..+|..|..+|++|++++..+.                   ++    .
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~   80 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMK   80 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHH
Confidence            478999998664                77899999999999999998875321                   11    1


Q ss_pred             hhh--ccCcEEEEecCCCCCC
Q 027064          206 SIV--READIVIAAAGQAMMV  224 (229)
Q Consensus       206 ~~~--~~aDivisA~g~p~~i  224 (229)
                      +.+  ..+|+||-+...+.|-
T Consensus        81 ~~~~~~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         81 SIITHEKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHhcccCCCEEEECcccccee
Confidence            224  2579999999888774

>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]

Probab=93.88  E-value=0.36  Score=44.11  Aligned_cols=155  Identities=22%  Similarity=0.225  Sum_probs=101.8

Q ss_pred             CeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCC-----CCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHH
Q 027064           40 PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLP-----EQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEE  114 (229)
Q Consensus        40 P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~-----~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~  114 (229)
                      ..||.|. .  ..|..---+=.-++..+|-...++.=.     ..-+-+|--..+.++     +|||.+--.  +|-+.+
T Consensus        45 k~laliF-e--K~STRTR~SFeva~~qlGg~~~~l~~~~~Qlgr~Esi~DTArVLsr~-----~D~I~~R~~--~~~~ve  114 (310)
T COG0078          45 KNLALIF-E--KTSTRTRVSFEVAATQLGGHAIYLGPGDSQLGRGESIKDTARVLSRM-----VDAIMIRGF--SHETLE  114 (310)
T ss_pred             ceEEEEe-c--CCCchhhhhHHHHHHHcCCCeEEeCCCccccCCCCcHHHHHHHHHhh-----hheEEEecc--cHHHHH
Confidence            3455555 3  234444444556788899988776422     122234444455444     899998654  444333


Q ss_pred             HHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEE
Q 027064          115 KVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATV  194 (229)
Q Consensus       115 ~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atV  194 (229)
                      ++.++    -.|.         +++| ....+.||-..|=+--++++...++|++++=+|-++.|+..+...-...|..|
T Consensus       115 ~lA~~----s~VP---------ViNg-LtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv  180 (310)
T COG0078         115 ELAKY----SGVP---------VING-LTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDV  180 (310)
T ss_pred             HHHHh----CCCc---------eEcc-cccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeE
Confidence            33331    1111         1222 23457799999988878777767999999999999999999988888889999


Q ss_pred             EEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          195 TIVHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       195 tv~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      +++.-+.                         .|..+..+.||+|.+-+
T Consensus       181 ~ia~Pk~~~p~~~~~~~a~~~a~~~g~~i~~t~d~~eAv~gADvvyTDv  229 (310)
T COG0078         181 RIATPKGYEPDPEVVEKAKENAKESGGKITLTEDPEEAVKGADVVYTDV  229 (310)
T ss_pred             EEECCCcCCcCHHHHHHHHHHHHhcCCeEEEecCHHHHhCCCCEEEecC
Confidence            9884432                         26667899999998764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=93.88  E-value=0.085  Score=45.19  Aligned_cols=36  Identities=22%  Similarity=0.419  Sum_probs=32.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+.||.|+|.|.+.-+|+.++..|.++|++|.++.+
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r   43 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI   43 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            367999999999999999999999999999877654

>PRK06701 short chain dehydrogenase; Provisional

Probab=93.86  E-value=0.11  Score=45.97  Aligned_cols=38  Identities=32%  Similarity=0.459  Sum_probs=34.0

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||+++|.|++.-+|..++..|+++|++|+++.+.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~   79 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD   79 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999999999999999999999999888554

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.86  E-value=0.12  Score=44.78  Aligned_cols=36  Identities=22%  Similarity=0.338  Sum_probs=30.9

Q ss_pred             CCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||.++|.|++  .-+|+.++..|.++|++|+++.+
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r   41 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA   41 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC
Confidence            4789999999985  33599999999999999998754

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=93.84  E-value=0.2  Score=47.84  Aligned_cols=35  Identities=31%  Similarity=0.526  Sum_probs=31.3

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -.|++|+|||+|.+ |...|..|.++|+.|++..+.
T Consensus       139 ~~~~~V~IIG~Gpa-Gl~aA~~l~~~G~~V~i~e~~  173 (467)
T TIGR01318       139 PTGKRVAVIGAGPA-GLACADILARAGVQVVVFDRH  173 (467)
T ss_pred             CCCCeEEEECCCHH-HHHHHHHHHHcCCeEEEEecC
Confidence            36899999999997 999999999999999998653

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=93.84  E-value=0.093  Score=44.18  Aligned_cols=36  Identities=28%  Similarity=0.423  Sum_probs=31.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++++|+++|.|++..+|+.++..|.++|+.|++..+
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~   38 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGT   38 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC
Confidence            467999999999999999999999999998877644

>PRK05993 short chain dehydrogenase; Provisional

Probab=93.82  E-value=0.083  Score=46.14  Aligned_cols=35  Identities=14%  Similarity=0.080  Sum_probs=31.5

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .||.++|.|++.-+|+.++..|.++|++|+++.+.
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~   37 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRK   37 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            37899999998889999999999999999988664

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=93.81  E-value=0.15  Score=44.15  Aligned_cols=54  Identities=24%  Similarity=0.378  Sum_probs=42.6

Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------CHHhhhccCcEEEEecCCCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------DPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~l~~~~~~aDivisA~g~p~~  223 (229)
                      |+|.|+++.+|..++..|+++|++|+...+.-.                ...+.+...|+||..+|.+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~   70 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEPIA   70 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCCcc
Confidence            589999999999999999999999998876422                112346678999999987653

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=93.81  E-value=0.19  Score=45.11  Aligned_cols=52  Identities=15%  Similarity=0.188  Sum_probs=41.5

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhcc---CcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVRE---ADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~---aDivisA~g~p  221 (229)
                      +|.+||.|.+ |.+++..|++.|..|+++++..              .+..+....   +|+||+++..+
T Consensus         2 ~Ig~IGlG~M-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~   70 (301)
T PRK09599          2 QLGMIGLGRM-GGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAG   70 (301)
T ss_pred             EEEEEcccHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCC
Confidence            6899999996 9999999999999999998742              134444554   69999988765

>PRK06914 short chain dehydrogenase; Provisional

Probab=93.80  E-value=0.091  Score=45.58  Aligned_cols=34  Identities=32%  Similarity=0.274  Sum_probs=30.7

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .||.++|.|++..+|+.++..|+++|+.|+++.+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r   35 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMR   35 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeC
Confidence            5789999999999999999999999999887744

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.80  E-value=0.11  Score=45.02  Aligned_cols=38  Identities=18%  Similarity=0.301  Sum_probs=31.9

Q ss_pred             CCCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|+|  .-+|+.++..|+++|++|.++.+.
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~   45 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLN   45 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence            35789999999987  235999999999999999887553

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=93.80  E-value=0.19  Score=39.37  Aligned_cols=50  Identities=30%  Similarity=0.420  Sum_probs=37.4

Q ss_pred             eEEEEccchhhhHHHHHHHhh-CCCE-EEEEcCCC----------------------CCHHhhhccCcEEEEec
Q 027064          169 RAVVVGRSNIVGLPVSLLLLK-ADAT-VTIVHSHT----------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~-~~at-Vtv~~~~t----------------------~~l~~~~~~aDivisA~  218 (229)
                      +|.|+|.++-+|+.++.++.+ .+.+ |-.+.+..                      .++++.+..+|++|..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT   75 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT   75 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcC
Confidence            789999944469999999998 6766 44444443                      46788899999999987

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK11303 DNA-binding transcriptional regulator FruR; Provisional

Probab=93.80  E-value=2.3  Score=37.52  Aligned_cols=93  Identities=14%  Similarity=0.187  Sum_probs=56.8

Q ss_pred             hhcccHH----HHHHHHHHHHHHHHHHHh---------cCCCCCeEEEEEEC-CCcccHHHHHHHHHHHHHcCCeeeeec
Q 027064           10 TIIDGKA----VAQTIRSEIAEEVRLLSE---------KYGKVPGLAVVIVG-GRKDSQSYVSMKRKACAEVGIKSFDID   75 (229)
Q Consensus        10 ~il~G~~----la~~i~~~i~~~~~~l~~---------~~~~~P~LaiI~vg-~~~~s~~Y~~~k~k~a~~~Gi~~~~~~   75 (229)
                      ++|+|+.    ++++.++++.+.+++|.=         +.+....++++.-. +++--....+...+.|++.|..+.+..
T Consensus        19 rvLn~~~~~~~Vs~~tr~rV~~~a~elgY~pn~~a~~l~~~~~~~Igvv~~~~~~~~~~~l~~gi~~~~~~~g~~~~~~~   98 (328)
T PRK11303         19 YVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLIIPDLENTSYARIAKYLERQARQRGYQLLIAC   98 (328)
T ss_pred             HHHcCCCCCCCcCHHHHHHHHHHHHHhCCCCCHHHHHhhcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEe
Confidence            6789985    888888888887776620         00123345555422 223333345678888999999987764


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCcEEEEeC
Q 027064           76 LPEQVSEAELISKVHELNVMPDVHGILVQL  105 (229)
Q Consensus        76 l~~~~~~~el~~~I~~lN~d~~v~GIlvq~  105 (229)
                      ...  +.+...+.++.+... +++||++.-
T Consensus        99 ~~~--~~~~~~~~~~~l~~~-~vdgiIi~~  125 (328)
T PRK11303         99 SDD--QPDNEMRCAEHLLQR-QVDALIVST  125 (328)
T ss_pred             CCC--CHHHHHHHHHHHHHc-CCCEEEEcC
Confidence            332  233334555555433 699999953

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=93.78  E-value=0.14  Score=46.86  Aligned_cols=51  Identities=25%  Similarity=0.159  Sum_probs=37.6

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      +|++..-++.+|..+.---.|.+|+|.|+++-||..+.+++...|+++.+.
T Consensus       123 l~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~  173 (326)
T COG0604         123 LPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAV  173 (326)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEE
Confidence            466666666666664322239999999988889999999999999654443

>PRK08507 prephenate dehydrogenase; Validated

Probab=93.78  E-value=0.18  Score=44.48  Aligned_cols=51  Identities=16%  Similarity=0.206  Sum_probs=38.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC---------------CCHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT---------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t---------------~~l~~~~~~aDivisA~g~p  221 (229)
                      +|.|||.|.+ |.+++..|.+.|.  +|+.+++..               .+..+ +.++|+||.|++..
T Consensus         2 ~I~iIG~G~m-G~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~-~~~aD~Vilavp~~   69 (275)
T PRK08507          2 KIGIIGLGLM-GGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEE-LKKCDVIFLAIPVD   69 (275)
T ss_pred             EEEEEccCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHH-HhcCCEEEEeCcHH
Confidence            6899999985 9999999998885  688776531               13334 34599999998743

>PRK07677 short chain dehydrogenase; Provisional

Probab=93.77  E-value=0.084  Score=45.17  Aligned_cols=34  Identities=21%  Similarity=0.259  Sum_probs=31.0

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ||.++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~   34 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRT   34 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            6899999999999999999999999999888653

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=93.77  E-value=0.17  Score=44.58  Aligned_cols=30  Identities=27%  Similarity=0.358  Sum_probs=27.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++|||.|.+ |..++..|.+.|..|+++.+
T Consensus         2 ~I~IiG~G~~-G~~~a~~L~~~g~~V~~~~r   31 (304)
T PRK06522          2 KIAILGAGAI-GGLFGAALAQAGHDVTLVAR   31 (304)
T ss_pred             EEEEECCCHH-HHHHHHHHHhCCCeEEEEEC
Confidence            6899999985 99999999999999998865

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=93.77  E-value=0.33  Score=42.81  Aligned_cols=52  Identities=19%  Similarity=0.037  Sum_probs=39.0

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      +|+.+..++..|.+...--.|.+|+|.|+++.||..+..++...|++|+.+.
T Consensus       124 ~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~  175 (329)
T cd08294         124 LGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCA  175 (329)
T ss_pred             cccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEe
Confidence            3555555666664444334799999999877789999999999999877654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08230 glucose_DH Glucose dehydrogenase

Probab=93.76  E-value=0.16  Score=45.91  Aligned_cols=57  Identities=28%  Similarity=0.410  Sum_probs=41.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC--CC-------------------CHHh--hhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH--TT-------------------DPES--IVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~--t~-------------------~l~~--~~~~aDivisA~g~p  221 (229)
                      ..|.+|+|+|.|. ||..+++++...|+.|+++.+.  +.                   +..+  ....+|+||.++|.+
T Consensus       171 ~~g~~vlI~G~G~-vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~  249 (355)
T cd08230         171 WNPRRALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVP  249 (355)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCH
Confidence            4799999999876 6999999999999998877652  11                   1100  123479999999976


Q ss_pred             C
Q 027064          222 M  222 (229)
Q Consensus       222 ~  222 (229)
                      .
T Consensus       250 ~  250 (355)
T cd08230         250 P  250 (355)
T ss_pred             H
Confidence            4

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=93.75  E-value=0.17  Score=45.92  Aligned_cols=55  Identities=33%  Similarity=0.442  Sum_probs=41.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC--C--------------------------CHHhhhccCcEEEEe
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT--T--------------------------DPESIVREADIVIAA  217 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t--~--------------------------~l~~~~~~aDivisA  217 (229)
                      .+|.|+|+++.||..++..|+..|.  .|+.+++..  .                          + .+.++.||+||.+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEe
Confidence            4799999955579999999998876  377765421  0                          1 2448999999999


Q ss_pred             cCCCCC
Q 027064          218 AGQAMM  223 (229)
Q Consensus       218 ~g~p~~  223 (229)
                      .|.|.-
T Consensus        80 ag~p~~   85 (309)
T cd05294          80 AGVPRK   85 (309)
T ss_pred             cCCCCC
Confidence            998864

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=93.75  E-value=0.13  Score=50.77  Aligned_cols=35  Identities=26%  Similarity=0.128  Sum_probs=31.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ..||.++|.|+++-+|+.++..|+++|++|+++.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~R  112 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVR  112 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeC
Confidence            47899999999988999999999999999987654

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=93.74  E-value=0.12  Score=48.59  Aligned_cols=51  Identities=25%  Similarity=0.393  Sum_probs=39.9

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------------------CHHhhhccCcEEEE
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------------------DPESIVREADIVIA  216 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------------------~l~~~~~~aDivis  216 (229)
                      +|.|||.|-+ |.|+|.+|. .|.+|+.++....                                +..+..+.||+||.
T Consensus         2 kI~VIGlGyv-Gl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii   79 (388)
T PRK15057          2 KITISGTGYV-GLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII   79 (388)
T ss_pred             EEEEECCCHH-HHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEE
Confidence            6899999995 999998777 4899999975211                                12344678999999


Q ss_pred             ecCCC
Q 027064          217 AAGQA  221 (229)
Q Consensus       217 A~g~p  221 (229)
                      +++-|
T Consensus        80 ~Vpt~   84 (388)
T PRK15057         80 ATPTD   84 (388)
T ss_pred             eCCCC
Confidence            99987

>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+))

Probab=93.74  E-value=0.13  Score=47.63  Aligned_cols=51  Identities=22%  Similarity=0.309  Sum_probs=40.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCC--------CEEEEEcCC---------------------------------CCCHHhh
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKAD--------ATVTIVHSH---------------------------------TTDPESI  207 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~--------atVtv~~~~---------------------------------t~~l~~~  207 (229)
                      +|+|||+|.. |..+|..|.+.|        .+|++..+.                                 |.|+.+.
T Consensus         1 kI~VIGaG~w-GtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea   79 (342)
T TIGR03376         1 RVAVVGSGNW-GTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA   79 (342)
T ss_pred             CEEEECcCHH-HHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence            5899999995 999999999888        778876430                                 1256678


Q ss_pred             hccCcEEEEecCC
Q 027064          208 VREADIVIAAAGQ  220 (229)
Q Consensus       208 ~~~aDivisA~g~  220 (229)
                      ++.||+||.|++.
T Consensus        80 l~~ADiIIlAVPs   92 (342)
T TIGR03376        80 AKGADILVFVIPH   92 (342)
T ss_pred             HhcCCEEEEECCh
Confidence            8999999999874

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.

>PRK06197 short chain dehydrogenase; Provisional

Probab=93.73  E-value=0.097  Score=46.40  Aligned_cols=36  Identities=25%  Similarity=0.302  Sum_probs=32.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||.|+|.|++.-+|+.++..|+++|++|+++.+
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r   48 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVR   48 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC
Confidence            468999999999988999999999999999887754

>PRK12744 short chain dehydrogenase; Provisional

Probab=93.69  E-value=0.12  Score=44.41  Aligned_cols=34  Identities=21%  Similarity=0.315  Sum_probs=30.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      .++||+++|.|.+.-+|+.++..|+++|++|.++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i   38 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAI   38 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEE
Confidence            4679999999999999999999999999985554

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=93.67  E-value=0.11  Score=48.62  Aligned_cols=35  Identities=34%  Similarity=0.531  Sum_probs=30.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .|+.++|+|||.|++ |-+++..|...|. ++++++.
T Consensus        39 ~L~~~~VlviG~GGl-Gs~va~~La~~Gvg~i~lvD~   74 (392)
T PRK07878         39 RLKNARVLVIGAGGL-GSPTLLYLAAAGVGTLGIVEF   74 (392)
T ss_pred             HHhcCCEEEECCCHH-HHHHHHHHHHcCCCeEEEECC
Confidence            357899999999995 9999999999988 7888854

>PLN02602 lactate dehydrogenase

Probab=93.65  E-value=0.2  Score=46.44  Aligned_cols=54  Identities=26%  Similarity=0.470  Sum_probs=40.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-------C-----------------HHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-------D-----------------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-------~-----------------l~~~~~~aDivisA~g~p  221 (229)
                      ++|.|||+|. ||..+|..|+.++.  .+.+++....       |                 -.+.+++|||||.+.|.|
T Consensus        38 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~~~~daDiVVitAG~~  116 (350)
T PLN02602         38 TKVSVVGVGN-VGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYAVTAGSDLCIVTAGAR  116 (350)
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHHHhCCCCEEEECCCCC
Confidence            7999999988 69999999988775  4666654211       0                 124489999999999987


Q ss_pred             C
Q 027064          222 M  222 (229)
Q Consensus       222 ~  222 (229)
                      .
T Consensus       117 ~  117 (350)
T PLN02602        117 Q  117 (350)
T ss_pred             C
Confidence            4

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=93.63  E-value=0.15  Score=45.19  Aligned_cols=30  Identities=33%  Similarity=0.377  Sum_probs=27.2

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +|+|+|.|.+ |..++..|.+.|..|+++.+
T Consensus         2 kI~IiG~G~i-G~~~a~~L~~~g~~V~~~~r   31 (305)
T PRK12921          2 RIAVVGAGAV-GGTFGGRLLEAGRDVTFLVR   31 (305)
T ss_pred             eEEEECCCHH-HHHHHHHHHHCCCceEEEec
Confidence            6899999995 99999999999999998766

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=93.61  E-value=0.16  Score=46.09  Aligned_cols=61  Identities=20%  Similarity=0.169  Sum_probs=31.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhh-CCC-EEEEEcCCC--------------------CCHHhhhccCcEEEEecCCCC---
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLK-ADA-TVTIVHSHT--------------------TDPESIVREADIVIAAAGQAM---  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~-~~a-tVtv~~~~t--------------------~~l~~~~~~aDivisA~g~p~---  222 (229)
                      +++.|||.|.- ++.-+..|.. ++. +|.+.+++.                    .+.++.++.|||||+||+...   
T Consensus       129 ~~l~viGaG~Q-A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~P  207 (313)
T PF02423_consen  129 RTLGVIGAGVQ-ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPAP  207 (313)
T ss_dssp             -EEEEE--SHH-HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEEE
T ss_pred             ceEEEECCCHH-HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCCc
Confidence            56666666664 5554444433 333 455554421                    146788999999999999888   


Q ss_pred             CCCCCCC
Q 027064          223 MVTMGIL  229 (229)
Q Consensus       223 ~i~~~~v  229 (229)
                      +++.+|+
T Consensus       208 ~~~~~~l  214 (313)
T PF02423_consen  208 VFDAEWL  214 (313)
T ss_dssp             SB-GGGS
T ss_pred             cccHHHc
Confidence            4687775

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>PRK07411 hypothetical protein; Validated

Probab=93.59  E-value=0.12  Score=48.39  Aligned_cols=35  Identities=26%  Similarity=0.452  Sum_probs=30.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .|+.++|+|||.|++ |-+++.+|...|. ++++++.
T Consensus        35 ~L~~~~VlivG~GGl-G~~va~~La~~Gvg~l~lvD~   70 (390)
T PRK07411         35 RLKAASVLCIGTGGL-GSPLLLYLAAAGIGRIGIVDF   70 (390)
T ss_pred             HHhcCcEEEECCCHH-HHHHHHHHHHcCCCEEEEECC
Confidence            467899999999995 9999999999998 7888855

>PRK07680 late competence protein ComER; Validated

Probab=93.56  E-value=0.19  Score=44.37  Aligned_cols=50  Identities=18%  Similarity=0.345  Sum_probs=39.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC----EEEEEcCCC----------------CCHHhhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA----TVTIVHSHT----------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a----tVtv~~~~t----------------~~l~~~~~~aDivisA~g  219 (229)
                      ++.|||.|.+ |..++..|.+.|.    +|+++++..                .+..+.+.++|+||.++.
T Consensus         2 ~I~iIG~G~m-G~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~   71 (273)
T PRK07680          2 NIGFIGTGNM-GTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVK   71 (273)
T ss_pred             EEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecC
Confidence            5899999996 9999999998873    788887742                134456788999999983

>PRK08267 short chain dehydrogenase; Provisional

Probab=93.53  E-value=0.087  Score=45.21  Aligned_cols=32  Identities=19%  Similarity=0.226  Sum_probs=29.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      |+++|.|++.-+|+.++..|+++|++|.++.+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r   33 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDI   33 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            78999999999999999999999999998865

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=93.53  E-value=0.14  Score=45.59  Aligned_cols=52  Identities=21%  Similarity=0.325  Sum_probs=37.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH------Hhhhc--cCcEEEEecCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP------ESIVR--EADIVIAAAGQ  220 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l------~~~~~--~aDivisA~g~  220 (229)
                      +++|+|+++.+|..+...|..+|..|..+.+..-|+      .+.+.  +.|+||.+.+-
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~   61 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAY   61 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEecccee
Confidence            799999999999999999999998888886654332      23443  36999999864

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK05086 malate dehydrogenase; Provisional

Probab=93.52  E-value=0.23  Score=45.17  Aligned_cols=56  Identities=25%  Similarity=0.411  Sum_probs=39.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhh-C--CCEEEEEcC--------------C---------CCCHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLK-A--DATVTIVHS--------------H---------TTDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~-~--~atVtv~~~--------------~---------t~~l~~~~~~aDivisA~g~p  221 (229)
                      ++++|||+++.||..++..|.. .  +..+++..+              .         +.++.+.++.+|+||.+.|.|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~   80 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA   80 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence            5899999966679999988843 2  224555432              1         124456788899999999987


Q ss_pred             CC
Q 027064          222 MM  223 (229)
Q Consensus       222 ~~  223 (229)
                      +-
T Consensus        81 ~~   82 (312)
T PRK05086         81 RK   82 (312)
T ss_pred             CC
Confidence            64

>PRK07109 short chain dehydrogenase; Provisional

Probab=93.52  E-value=0.089  Score=47.82  Aligned_cols=37  Identities=22%  Similarity=0.258  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++++|.++|.|+|.-+|+.++..|.++|++|+++.+.
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~   41 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARG   41 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4678999999999999999999999999999988663

>PRK07985 oxidoreductase; Provisional

Probab=93.52  E-value=0.12  Score=45.83  Aligned_cols=36  Identities=22%  Similarity=0.360  Sum_probs=32.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .++||+++|.|++.-+|+.++..|+++|++|+++.+
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~   81 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL   81 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence            478999999999999999999999999999988643

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=93.51  E-value=0.26  Score=45.01  Aligned_cols=63  Identities=16%  Similarity=0.181  Sum_probs=43.8

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhh--CCCEEEEEcCCC--------------------CCHHhhhccCcEEEEecCCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLK--ADATVTIVHSHT--------------------TDPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~--~~atVtv~~~~t--------------------~~l~~~~~~aDivisA~g~p~~  223 (229)
                      .-+++.|||.|.. |+..+..|..  ...+|.++++..                    .+..+.+++|||||+||+....
T Consensus       127 ~~~~lgiiG~G~q-A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P  205 (325)
T TIGR02371       127 DSSVLGIIGAGRQ-AWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKP  205 (325)
T ss_pred             CCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCc
Confidence            3588999999996 8875555443  334788876532                    2455778999999999987665


Q ss_pred             -CCCCCC
Q 027064          224 -VTMGIL  229 (229)
Q Consensus       224 -i~~~~v  229 (229)
                       +..+|+
T Consensus       206 ~~~~~~l  212 (325)
T TIGR02371       206 VVKADWV  212 (325)
T ss_pred             EecHHHc
Confidence             355553

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=93.51  E-value=0.19  Score=48.21  Aligned_cols=57  Identities=30%  Similarity=0.466  Sum_probs=45.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC-----H----H-----------hhhccCcEEEEecCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD-----P----E-----------SIVREADIVIAAAGQAM  222 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~-----l----~-----------~~~~~aDivisA~g~p~  222 (229)
                      +.||+|+|+|-|.. |+.++..|.++|+.|++++.+...     .    .           +....+|+||..=|.|.
T Consensus         5 ~~~~kv~V~GLG~s-G~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~~   81 (448)
T COG0771           5 FQGKKVLVLGLGKS-GLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGSHDDEDLAEFDLVVKSPGIPP   81 (448)
T ss_pred             ccCCEEEEEecccc-cHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCccchhccccCCEEEECCCCCC
Confidence            34899999999998 999999999999999999865322     0    0           23567899988777654

>PRK06128 oxidoreductase; Provisional

Probab=93.46  E-value=0.12  Score=45.76  Aligned_cols=35  Identities=14%  Similarity=0.429  Sum_probs=31.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      .++||+++|.|.+.-+|+.++..|+++|++|+++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~   86 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNY   86 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEe
Confidence            37899999999999999999999999999988764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=93.45  E-value=0.12  Score=43.93  Aligned_cols=37  Identities=22%  Similarity=0.323  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||+++|.|.+.-+|..++..|+++|++|+++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~   45 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRT   45 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence            3689999999999999999999999999999887653

>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]

Probab=93.44  E-value=0.1  Score=49.69  Aligned_cols=37  Identities=24%  Similarity=0.434  Sum_probs=33.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||+|+|||+|.. |--++-.|...|++||+.-|.
T Consensus       171 ~~~~GKrV~VIG~GaS-A~di~~~l~~~ga~vt~~qRs  207 (443)
T COG2072         171 EDLRGKRVLVIGAGAS-AVDIAPELAEVGASVTLSQRS  207 (443)
T ss_pred             cccCCCeEEEECCCcc-HHHHHHHHHhcCCeeEEEecC
Confidence            4789999999999998 999999999999999998664

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=93.42  E-value=0.13  Score=46.12  Aligned_cols=52  Identities=10%  Similarity=0.101  Sum_probs=40.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHH---hhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPE---SIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~---~~~~~aDivisA~g~p  221 (229)
                      +|.|||.|.+ |.+++..|.+.|.+|++.+++..              +..   +.+..+|+||.++...
T Consensus         2 ~Ig~IGlG~m-G~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~   70 (298)
T TIGR00872         2 QLGLIGLGRM-GANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG   70 (298)
T ss_pred             EEEEEcchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCch
Confidence            6899999996 99999999999999999877421              222   2345689999988754

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=93.40  E-value=0.14  Score=43.45  Aligned_cols=37  Identities=27%  Similarity=0.365  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.+|+++|.|.+.-+|+.++..|.++|+.|+++.+.
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~   41 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA   41 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            4789999999999989999999999999999887653

>PRK08303 short chain dehydrogenase; Provisional

Probab=93.40  E-value=0.13  Score=46.23  Aligned_cols=37  Identities=30%  Similarity=0.361  Sum_probs=33.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.|.-+|+.++..|+++|++|.++.+.
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            5789999999999888999999999999999887654

>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related

Probab=93.37  E-value=0.18  Score=44.44  Aligned_cols=50  Identities=28%  Similarity=0.334  Sum_probs=41.1

Q ss_pred             ccCCHHHHHHHHHH----hCCC-CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          147 LPCTPKGCLELLKR----SGVT-IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       147 ~PcTa~av~~lL~~----~~~~-l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      .++|.+|+...++.    ++.+ ++|++|+|=|.|. ||..++.+|++.|+.|..+
T Consensus         7 ~~aTg~GV~~~~~~~~~~~~~~~l~g~~v~IqGfG~-VG~~~a~~l~~~Ga~vv~v   61 (244)
T PF00208_consen    7 SEATGYGVAYAIEAALEHLGGDSLEGKRVAIQGFGN-VGSHAARFLAELGAKVVAV   61 (244)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCHSSTTCEEEEEESSH-HHHHHHHHHHHTTEEEEEE
T ss_pred             CcchHHHHHHHHHHHHHHcCCCCcCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEE
Confidence            47888888877665    3544 9999999999998 5999999999999986544

They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C ....

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=93.35  E-value=0.13  Score=46.16  Aligned_cols=35  Identities=20%  Similarity=0.140  Sum_probs=32.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      +++||+|+|.|+++.+|..++..|+++|++|+.+.
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~   37 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGII   37 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEe
Confidence            57899999999999999999999999999988763

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=93.34  E-value=0.16  Score=42.99  Aligned_cols=36  Identities=28%  Similarity=0.438  Sum_probs=32.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .++||+++|.|.+.-+|..++..|+++|++|++..+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~   38 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYN   38 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcC
Confidence            367999999999999999999999999999987644

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=93.33  E-value=0.17  Score=42.05  Aligned_cols=31  Identities=16%  Similarity=0.424  Sum_probs=26.3

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      +|+|||.|.+ |-.++..|...|. ++++++..
T Consensus         1 ~VlViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D   32 (174)
T cd01487           1 KVGIAGAGGL-GSNIAVLLARSGVGNLKLVDFD   32 (174)
T ss_pred             CEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence            5899999995 9999999999998 58888654

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PTZ00188 adrenodoxin reductase; Provisional

Probab=93.32  E-value=0.29  Score=47.70  Aligned_cols=57  Identities=19%  Similarity=0.212  Sum_probs=44.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHh-hCCCEEEEEcCCCC------------------------------------------
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLL-KADATVTIVHSHTT------------------------------------------  202 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~-~~~atVtv~~~~t~------------------------------------------  202 (229)
                      .+|+|+|||+|.. |-.+|..|+ +.|+.|+++.+...                                          
T Consensus        38 ~~krVAIVGaGPA-GlyaA~~Ll~~~g~~VtlfEk~p~pgGLvR~GVaPdh~~~k~v~~~f~~~~~~~~v~f~gnv~VG~  116 (506)
T PTZ00188         38 KPFKVGIIGAGPS-ALYCCKHLLKHERVKVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPVFLSPNYRFFGNVHVGV  116 (506)
T ss_pred             CCCEEEEECCcHH-HHHHHHHHHHhcCCeEEEEecCCCCccEEEEeCCCCCccHHHHHHHHHHHHhhCCeEEEeeeEecC
Confidence            5789999999998 999998654 67999999966321                                          


Q ss_pred             --CHHhhhccCcEEEEecCCCCC
Q 027064          203 --DPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       203 --~l~~~~~~aDivisA~g~p~~  223 (229)
                        .++++..+.|.||.|+|....
T Consensus       117 Dvt~eeL~~~YDAVIlAtGA~~l  139 (506)
T PTZ00188        117 DLKMEELRNHYNCVIFCCGASEV  139 (506)
T ss_pred             ccCHHHHHhcCCEEEEEcCCCCC
Confidence              233556778999999997654

>PRK10401 DNA-binding transcriptional regulator GalS; Provisional

Probab=93.31  E-value=1.9  Score=38.47  Aligned_cols=89  Identities=13%  Similarity=0.126  Sum_probs=53.7

Q ss_pred             hhcccHH-HHHHHHHHHHHHHHHHHhcCCCCC-------------eEEEEEEC-CCcccHHHHHHHHHHHHHcCCeeeee
Q 027064           10 TIIDGKA-VAQTIRSEIAEEVRLLSEKYGKVP-------------GLAVVIVG-GRKDSQSYVSMKRKACAEVGIKSFDI   74 (229)
Q Consensus        10 ~il~G~~-la~~i~~~i~~~~~~l~~~~~~~P-------------~LaiI~vg-~~~~s~~Y~~~k~k~a~~~Gi~~~~~   74 (229)
                      +.|+|+. ++++-++++.+.++++    |..|             .++++.-+ .++--...++...+.|++.|......
T Consensus        20 rvLn~~~~Vs~~tr~kV~~~a~el----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~f~~~l~~gi~~~~~~~gy~~~~~   95 (346)
T PRK10401         20 RVLNNSALVSADTREAVMKAVSEL----GYRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIG   95 (346)
T ss_pred             HHHCCCCCCCHHHHHHHHHHHHHH----CCCCCHHHHHhhcCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHCCCEEEEE
Confidence            5677753 6666666666555554    5555             46666532 12222334566788999999987765


Q ss_pred             cCCCCCCHHHHHHHHHHhcCCCCCcEEEEeC
Q 027064           75 DLPEQVSEAELISKVHELNVMPDVHGILVQL  105 (229)
Q Consensus        75 ~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~  105 (229)
                      ....  +.++..+.++.+.. .+++||++.-
T Consensus        96 ~~~~--~~~~~~~~i~~l~~-~~vdGiIi~~  123 (346)
T PRK10401         96 NSYH--EAEKERHAIEVLIR-QRCNALIVHS  123 (346)
T ss_pred             cCCC--ChHHHHHHHHHHHh-cCCCEEEEeC
Confidence            5442  33444556666644 3699999973

>PRK06720 hypothetical protein; Provisional

Probab=93.31  E-value=0.13  Score=42.51  Aligned_cols=36  Identities=33%  Similarity=0.432  Sum_probs=32.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .++||.++|.|++.-+|+.++..|.++|++|.++.+
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r   48 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDI   48 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEEC
Confidence            468999999999987899999999999999988754

>PLN02206 UDP-glucuronate decarboxylase

Probab=93.28  E-value=0.24  Score=47.14  Aligned_cols=37  Identities=30%  Similarity=0.416  Sum_probs=32.5

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ...++++|+|.|+++.||+.++..|+++|.+|+.+.+
T Consensus       115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~  151 (442)
T PLN02206        115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDN  151 (442)
T ss_pred             cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeC
Confidence            3446799999999999999999999999999988753

>PRK12746 short chain dehydrogenase; Provisional

Probab=93.26  E-value=0.16  Score=43.16  Aligned_cols=34  Identities=32%  Similarity=0.455  Sum_probs=31.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      ++.||+++|.|++.-+|..++..|+++|++|.++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~   36 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIH   36 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            3678999999999999999999999999998775

>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]

Probab=93.25  E-value=0.21  Score=45.78  Aligned_cols=54  Identities=24%  Similarity=0.345  Sum_probs=45.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g  219 (229)
                      |+||+|+|||.|.= |..=|..|...|.+|++--+.-.              ...+.+++||+|..-++
T Consensus        16 LkgK~iaIIGYGsQ-G~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~P   83 (338)
T COG0059          16 LKGKKVAIIGYGSQ-GHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLP   83 (338)
T ss_pred             hcCCeEEEEecChH-HHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCc
Confidence            68999999999996 99999999999999998766421              46688999999987654

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=93.24  E-value=0.22  Score=47.16  Aligned_cols=53  Identities=26%  Similarity=0.265  Sum_probs=43.8

Q ss_pred             cccCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          146 FLPCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      --+.|.+|+....+    +.+.+++|++|+|=|.|+ ||.-++..|.+.||.|..|.-
T Consensus       182 r~~aTg~Gv~~~~~~a~~~~g~~l~G~rVaVQG~GN-Vg~~aa~~l~~~GAkvva~sd  238 (411)
T COG0334         182 RSEATGYGVFYAIREALKALGDDLEGARVAVQGFGN-VGQYAAEKLHELGAKVVAVSD  238 (411)
T ss_pred             CCcccceehHHHHHHHHHHcCCCcCCCEEEEECccH-HHHHHHHHHHHcCCEEEEEEc
Confidence            44688888776554    567779999999999999 599999999999999887743

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=93.22  E-value=0.3  Score=44.44  Aligned_cols=52  Identities=23%  Similarity=0.279  Sum_probs=38.1

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +||....++..+...+....|.+++|.|.|. +|..++.++...|+.|+++.+
T Consensus       161 l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~-vG~~av~~Ak~~G~~vi~~~~  212 (357)
T PLN02514        161 LLCAGVTVYSPLSHFGLKQSGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISS  212 (357)
T ss_pred             hhhhHHHHHHHHHHcccCCCCCeEEEEcccH-HHHHHHHHHHHCCCeEEEEeC
Confidence            3454455555565555545799999999876 699999999999998766543

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=93.20  E-value=0.22  Score=45.52  Aligned_cols=59  Identities=24%  Similarity=0.331  Sum_probs=49.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecCCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g~p~~  223 (229)
                      .-+-+++=-||-|.+ |.+++..|.+.|++||+.+++-+              ...|..+.+|+||+.++.|.-
T Consensus        32 ~~s~~~iGFIGLG~M-G~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~  104 (327)
T KOG0409|consen   32 TPSKTRIGFIGLGNM-GSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPKD  104 (327)
T ss_pred             CcccceeeEEeeccc-hHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChHh
Confidence            335689999999997 99999999999999999987532              345889999999999987754

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=93.20  E-value=0.17  Score=45.15  Aligned_cols=51  Identities=16%  Similarity=0.298  Sum_probs=39.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC----EEEEEcCCCC---------------CHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA----TVTIVHSHTT---------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a----tVtv~~~~t~---------------~l~~~~~~aDivisA~g  219 (229)
                      +++.+||.|.+ |.+++..|.+.|.    .|+++++...               +..+.+++||+||.|+.
T Consensus         3 ~~IgfIG~G~M-G~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavk   72 (272)
T PRK12491          3 KQIGFIGCGNM-GIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIK   72 (272)
T ss_pred             CeEEEECccHH-HHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeC
Confidence            47999999996 9999999998774    5888875321               23345788999999987

>PRK09526 lacI lac repressor; Reviewed

Probab=93.16  E-value=0.85  Score=40.53  Aligned_cols=93  Identities=14%  Similarity=0.251  Sum_probs=57.9

Q ss_pred             hhcccHH-HHHHHHHHHHHHHHHHHhcCCCCC-------------eEEEEEECC-CcccHHHHHHHHHHHHHcCCeeeee
Q 027064           10 TIIDGKA-VAQTIRSEIAEEVRLLSEKYGKVP-------------GLAVVIVGG-RKDSQSYVSMKRKACAEVGIKSFDI   74 (229)
Q Consensus        10 ~il~G~~-la~~i~~~i~~~~~~l~~~~~~~P-------------~LaiI~vg~-~~~s~~Y~~~k~k~a~~~Gi~~~~~   74 (229)
                      ++|+|+. ++++.++++.+.+++|    |..|             .++++.-.- ++--....+...+.|++.|.++...
T Consensus        24 rvLn~~~~vs~~tr~rV~~~a~el----gY~pn~~a~~l~~~~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~i~   99 (342)
T PRK09526         24 RVLNQASHVSAKTREKVEAAMAEL----NYVPNRVAQQLAGKQSLTIGLATTSLALHAPSQIAAAIKSRADQLGYSVVIS   99 (342)
T ss_pred             HHhcCCCCCCHHHHHHHHHHHHHH----CCCcCHHHHHhhcCCCceEEEEeCCCCcccHHHHHHHHHHHHHHCCCEEEEE
Confidence            5678765 6666677766666555    4444             455554221 2222345677889999999998876


Q ss_pred             cCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCC
Q 027064           75 DLPEQVSEAELISKVHELNVMPDVHGILVQLPLP  108 (229)
Q Consensus        75 ~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp  108 (229)
                      ..+.+ +.++..+.++.+.. .++|||++..|..
T Consensus       100 ~~~~~-~~~~~~~~l~~l~~-~~vdGiii~~~~~  131 (342)
T PRK09526        100 MVERS-GVEACQAAVNELLA-QRVSGVIINVPLE  131 (342)
T ss_pred             eCCCC-hHHHHHHHHHHHHh-cCCCEEEEecCCC
Confidence            55432 22344456666644 4799999976654

>PRK07102 short chain dehydrogenase; Provisional

Probab=93.15  E-value=0.11  Score=44.15  Aligned_cols=34  Identities=12%  Similarity=0.177  Sum_probs=30.4

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~   34 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARD   34 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence            3789999999999999999999999999988653

>PLN00106 malate dehydrogenase

Probab=93.13  E-value=0.36  Score=44.33  Aligned_cols=58  Identities=24%  Similarity=0.355  Sum_probs=42.3

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcC-----------------------CCCCHHhhhccCcEEEEecCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHS-----------------------HTTDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~-----------------------~t~~l~~~~~~aDivisA~g~  220 (229)
                      ..++|+|||+.+.||..++..|..++.  .+.+++.                       .+.++.+.++.||+||.+.|.
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~   96 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV   96 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence            457999999934479999999985543  4444432                       123456789999999999998


Q ss_pred             CCC
Q 027064          221 AMM  223 (229)
Q Consensus       221 p~~  223 (229)
                      |..
T Consensus        97 ~~~   99 (323)
T PLN00106         97 PRK   99 (323)
T ss_pred             CCC
Confidence            754

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=93.13  E-value=0.26  Score=45.14  Aligned_cols=54  Identities=28%  Similarity=0.446  Sum_probs=40.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC---C----C------------------HHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT---T----D------------------PESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t---~----~------------------l~~~~~~aDivisA~g~  220 (229)
                      ++|+|||+|. ||.++|.+|..++.  .+.+.+...   +    |                  -.+.++.||+||-..|.
T Consensus         1 ~KVaviGaG~-VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvitAG~   79 (313)
T COG0039           1 MKVAVIGAGN-VGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVITAGV   79 (313)
T ss_pred             CeEEEECCCh-HHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEeCCC
Confidence            5899999977 69999999988765  455554431   1    1                  13669999999999997


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      |.
T Consensus        80 pr   81 (313)
T COG0039          80 PR   81 (313)
T ss_pred             CC
Confidence            74

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=93.11  E-value=0.13  Score=43.94  Aligned_cols=34  Identities=21%  Similarity=0.257  Sum_probs=30.8

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|.++|.|.+..+|+.++..|+++|++|.++.+.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~   35 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADIN   35 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            6899999999999999999999999999888653

>PRK07791 short chain dehydrogenase; Provisional

Probab=93.10  E-value=0.16  Score=44.90  Aligned_cols=35  Identities=20%  Similarity=0.333  Sum_probs=32.2

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++||.++|.|.|.-+|+.++..|+++|++|+++.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~   38 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI   38 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeC
Confidence            67999999999999999999999999999988754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.10  E-value=0.15  Score=44.74  Aligned_cols=35  Identities=20%  Similarity=0.392  Sum_probs=30.8

Q ss_pred             CCCCeEEEEccch--hhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSN--IVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~--~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++||.++|.|+|.  -+|+.+|..|+++|++|.++.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r   41 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQ   41 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecC
Confidence            6899999999983  3599999999999999998754

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=93.09  E-value=0.38  Score=44.42  Aligned_cols=75  Identities=21%  Similarity=0.234  Sum_probs=49.9

Q ss_pred             ccCCHHHHHHHHHHhCCC-CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---------------------H
Q 027064          147 LPCTPKGCLELLKRSGVT-IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---------------------P  204 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~-l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---------------------l  204 (229)
                      ++|....++..+...+.. ..|..|+|.|.|. ||..+++++...|++|+++.+....                     +
T Consensus       158 l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v  236 (375)
T PLN02178        158 LLCAGITVYSPMKYYGMTKESGKRLGVNGLGG-LGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKM  236 (375)
T ss_pred             hhccchHHHHHHHHhCCCCCCCCEEEEEcccH-HHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHH
Confidence            455555555556555432 3699999999876 6999999999999987776432111                     0


Q ss_pred             HhhhccCcEEEEecCCCC
Q 027064          205 ESIVREADIVIAAAGQAM  222 (229)
Q Consensus       205 ~~~~~~aDivisA~g~p~  222 (229)
                      .+.+..+|+|+.++|.+.
T Consensus       237 ~~~~~~~D~vid~~G~~~  254 (375)
T PLN02178        237 KEAVGTMDFIIDTVSAEH  254 (375)
T ss_pred             HHhhCCCcEEEECCCcHH
Confidence            111223699999988763

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=93.08  E-value=0.18  Score=46.46  Aligned_cols=53  Identities=23%  Similarity=0.335  Sum_probs=43.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC-------------C---------------CCCHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS-------------H---------------TTDPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~-------------~---------------t~~l~~~~~~aDivisA~g  219 (229)
                      ++|.|+|+|.- |..+|..|.+.|..|++--+             .               |.|+.+.+..||+|+.|++
T Consensus         2 ~kI~ViGaGsw-GTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP   80 (329)
T COG0240           2 MKIAVIGAGSW-GTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP   80 (329)
T ss_pred             ceEEEEcCChH-HHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence            58999999997 99999999999988877532             1               1267788889999999987


Q ss_pred             CC
Q 027064          220 QA  221 (229)
Q Consensus       220 ~p  221 (229)
                      .-
T Consensus        81 s~   82 (329)
T COG0240          81 SQ   82 (329)
T ss_pred             hH
Confidence            54

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=93.06  E-value=0.21  Score=43.61  Aligned_cols=52  Identities=23%  Similarity=0.332  Sum_probs=40.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC---CEEEEEcCCC---------------CCHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD---ATVTIVHSHT---------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~---atVtv~~~~t---------------~~l~~~~~~aDivisA~g~  220 (229)
                      .++.|||.|.+ |..++..|.+.|   ..|+++++..               .+..+.+.++|+||.++..
T Consensus         3 m~I~iIG~G~m-G~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~   72 (267)
T PRK11880          3 KKIGFIGGGNM-ASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP   72 (267)
T ss_pred             CEEEEEechHH-HHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH
Confidence            47999999996 999999999887   5788887642               1334557789999998853

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=93.02  E-value=0.34  Score=44.09  Aligned_cols=52  Identities=19%  Similarity=0.020  Sum_probs=38.8

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      +||....++..|......-.|.+|+|.|.++.||..+++++..+|++|+.+.
T Consensus       139 l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~  190 (348)
T PLN03154        139 LGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSA  190 (348)
T ss_pred             cccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEc
Confidence            3555555566665443334799999999977789999999999999877653

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=93.02  E-value=0.23  Score=45.35  Aligned_cols=54  Identities=24%  Similarity=0.399  Sum_probs=39.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcC-----------------------CCCCHHhhhccCcEEEEecCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHS-----------------------HTTDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~-----------------------~t~~l~~~~~~aDivisA~g~p~  222 (229)
                      +|+|||+++.||..+|..|..++.  .+.+++.                       .+.++.+.++.|||||.+.|.|.
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~   80 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR   80 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence            799999944479999999987764  3443321                       11223577999999999999874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06180 short chain dehydrogenase; Provisional

Probab=93.02  E-value=0.13  Score=44.80  Aligned_cols=35  Identities=20%  Similarity=0.092  Sum_probs=31.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+|.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   37 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS   37 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC
Confidence            47899999999999999999999999999988763

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=93.00  E-value=0.56  Score=41.15  Aligned_cols=51  Identities=25%  Similarity=0.249  Sum_probs=37.8

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      +|+.+..++..++...+ -.|..++|.|.++.+|..++.++...|++|+++.
T Consensus       121 ~~~~~~ta~~~~~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~  171 (324)
T cd08292         121 LIAMPLSALMLLDFLGV-KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLV  171 (324)
T ss_pred             ccccHHHHHHHHHhhCC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEe
Confidence            34555555555554333 3689999999988889999999999999877663

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=93.00  E-value=0.18  Score=42.62  Aligned_cols=33  Identities=21%  Similarity=0.175  Sum_probs=30.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      ++||.++|.|.+.-+|+.++..|.++|++|.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~   33 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAG   33 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEE
Confidence            468999999999999999999999999998774

>PRK07831 short chain dehydrogenase; Provisional

Probab=92.98  E-value=0.15  Score=43.87  Aligned_cols=37  Identities=24%  Similarity=0.299  Sum_probs=31.0

Q ss_pred             CCCCCeEEEEccch-hhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSN-IVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~-~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||.++|.|.++ -+|+.++..|.++|++|+++.+.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~   51 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIH   51 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCC
Confidence            35689999999853 36999999999999999987553

>PRK06823 ornithine cyclodeaminase; Validated

Probab=92.96  E-value=0.21  Score=45.55  Aligned_cols=27  Identities=7%  Similarity=0.215  Sum_probs=21.7

Q ss_pred             CHHhhhccCcEEEEecCCCCC-CCCCCC
Q 027064          203 DPESIVREADIVIAAAGQAMM-VTMGIL  229 (229)
Q Consensus       203 ~l~~~~~~aDivisA~g~p~~-i~~~~v  229 (229)
                      +.++.++.||||++||+.... +..+|+
T Consensus       185 ~~~~av~~ADIV~taT~s~~P~~~~~~l  212 (315)
T PRK06823        185 DAAEVAHAANLIVTTTPSREPLLQAEDI  212 (315)
T ss_pred             CHHHHhcCCCEEEEecCCCCceeCHHHc
Confidence            456788999999999998776 477764

>PRK07024 short chain dehydrogenase; Provisional

Probab=92.95  E-value=0.12  Score=44.48  Aligned_cols=34  Identities=18%  Similarity=0.257  Sum_probs=30.9

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+|+|.|.+.-+|+.++..|+++|++|+++.++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~   35 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARR   35 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5799999999999999999999999999988753

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=92.95  E-value=0.36  Score=43.23  Aligned_cols=52  Identities=19%  Similarity=0.027  Sum_probs=39.4

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      +||....++..|.+...--.|.+|+|.|+++.||..+++++..+|++|+.+.
T Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~  183 (338)
T cd08295         132 LGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSA  183 (338)
T ss_pred             cccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEe
Confidence            3555556666665544334799999999977789999999999999877643

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK08177 short chain dehydrogenase; Provisional

Probab=92.94  E-value=0.2  Score=42.09  Aligned_cols=33  Identities=27%  Similarity=0.293  Sum_probs=29.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      |+|+|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~   34 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRG   34 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCC
Confidence            689999999999999999999999999987654

>PRK08324 short chain dehydrogenase; Validated

Probab=92.90  E-value=0.18  Score=50.40  Aligned_cols=37  Identities=24%  Similarity=0.317  Sum_probs=32.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+.||.++|.|.++-+|+.++..|.++|++|+++.+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~  455 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLD  455 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence            4689999999987778999999999999999888653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=92.89  E-value=0.18  Score=42.52  Aligned_cols=34  Identities=18%  Similarity=0.294  Sum_probs=30.8

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|.++|.|++.-+|+.++..|.++|++|+++.+.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~   35 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRT   35 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence            5899999999989999999999999999888664

>PLN02780 ketoreductase/ oxidoreductase

Probab=92.88  E-value=0.1  Score=47.25  Aligned_cols=35  Identities=20%  Similarity=0.342  Sum_probs=31.8

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+.++|.|+|.-+|+.+|..|+++|++|.++.+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~   86 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARN   86 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECC
Confidence            69999999999989999999999999999887653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.86  E-value=0.17  Score=43.73  Aligned_cols=35  Identities=23%  Similarity=0.366  Sum_probs=30.2

Q ss_pred             CCCCeEEEEcc--chhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGR--SNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~--s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++||.++|.|+  |.-+|+.++..|+++|++|+++.+
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r   41 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGF   41 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecC
Confidence            67999999997  445699999999999999988753

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.79  E-value=0.19  Score=42.08  Aligned_cols=32  Identities=31%  Similarity=0.507  Sum_probs=29.3

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEE
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTI  196 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv  196 (229)
                      +..|+++|+|+++.+|+.++..|.++|++|++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~   35 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVV   35 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEE
Confidence            45789999999999999999999999999876

>PRK12747 short chain dehydrogenase; Provisional

Probab=92.76  E-value=0.2  Score=42.69  Aligned_cols=34  Identities=35%  Similarity=0.407  Sum_probs=31.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      ++||.++|.|.+.-+|+.++..|.++|++|.++.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~   35 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHY   35 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence            4689999999999999999999999999998863

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=92.74  E-value=0.39  Score=42.91  Aligned_cols=52  Identities=31%  Similarity=0.367  Sum_probs=38.5

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~  199 (229)
                      .++|....++..++..++ ..|.+|+|.|.|. +|..+++++...|+. |+++.+
T Consensus       144 ~l~~~~~ta~~~l~~~~~-~~g~~vlV~G~G~-vG~~~~~~ak~~G~~~vi~~~~  196 (339)
T cd08239         144 LLLCGIGTAYHALRRVGV-SGRDTVLVVGAGP-VGLGALMLARALGAEDVIGVDP  196 (339)
T ss_pred             hhcchHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECC
Confidence            345555555555665554 3599999999865 699999999999998 887654

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.69  E-value=0.37  Score=45.25  Aligned_cols=56  Identities=25%  Similarity=0.418  Sum_probs=42.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC-----HH------------hhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD-----PE------------SIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~-----l~------------~~~~~aDivisA~g~p  221 (229)
                      +.+|++.|+|-|.. |+..+.+|+++|+.|+.++.....     +.            +.++..|+||...|.|
T Consensus         4 ~~~~~i~v~G~G~s-G~s~~~~l~~~G~~v~~~D~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~d~vv~spgi~   76 (438)
T PRK03806          4 YQGKKVVIIGLGLT-GLSCVDFFLARGVTPRVIDTRITPPGLDKLPENVERHTGSLNDEWLLAADLIVASPGIA   76 (438)
T ss_pred             cCCCEEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCCCchhHHHHhcCCEEEeCCCCHHHhcCCCEEEECCCCC
Confidence            46899999999997 999999999999999999864211     11            1234578888777765

>PLN02240 UDP-glucose 4-epimerase

Probab=92.66  E-value=0.2  Score=44.96  Aligned_cols=35  Identities=26%  Similarity=0.449  Sum_probs=31.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      .+.+|+|+|.|+++.+|+.++..|.++|++|+++.
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~   36 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVID   36 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence            46789999999999999999999999999998874

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=92.63  E-value=0.44  Score=44.57  Aligned_cols=54  Identities=22%  Similarity=0.351  Sum_probs=43.2

Q ss_pred             CcccCCHHHHHHHHHHhC-CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          145 LFLPCTPKGCLELLKRSG-VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       145 ~~~PcTa~av~~lL~~~~-~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      -++=+++..+-++.+.++ .+...++++|+|.|.+ |+.++..|.+.|..|++...
T Consensus       208 l~v~g~~~~l~~~~~~~~~~~~~~~~iiIiG~G~~-g~~l~~~L~~~~~~v~vid~  262 (453)
T PRK09496        208 VYFIGAREHIRAVMSEFGRLEKPVKRVMIVGGGNI-GYYLAKLLEKEGYSVKLIER  262 (453)
T ss_pred             EEEEeCHHHHHHHHHHhCccCCCCCEEEEECCCHH-HHHHHHHHHhCCCeEEEEEC
Confidence            345577888877777665 3356799999999995 99999999999999888844

>PRK07454 short chain dehydrogenase; Provisional

Probab=92.61  E-value=0.2  Score=42.35  Aligned_cols=35  Identities=26%  Similarity=0.332  Sum_probs=31.5

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~   39 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARS   39 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57899999998889999999999999999988663

>TIGR02417 fruct_sucro_rep D-fructose-responsive transcription factor

Probab=92.61  E-value=1  Score=39.88  Aligned_cols=88  Identities=19%  Similarity=0.258  Sum_probs=58.3

Q ss_pred             hhcccHH----HHHHHHHHHHHHHHHHHhcCCCCC-------------eEEEEEEC-CCcccHHHHHHHHHHHHHcCCee
Q 027064           10 TIIDGKA----VAQTIRSEIAEEVRLLSEKYGKVP-------------GLAVVIVG-GRKDSQSYVSMKRKACAEVGIKS   71 (229)
Q Consensus        10 ~il~G~~----la~~i~~~i~~~~~~l~~~~~~~P-------------~LaiI~vg-~~~~s~~Y~~~k~k~a~~~Gi~~   71 (229)
                      ++|+|+.    ++++.++++.+.++++    |.+|             .++++.-. .++-.....+...+.|++.|..+
T Consensus        18 rvLn~~~~~~~vs~~tr~rV~~~a~~l----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~~i~~~~~~~gy~~   93 (327)
T TIGR02417        18 YVINGKAKEYRISQETVERVMAVVREQ----GYQPNIHAASLRAGRSRTIGLVIPDLENYSYARIAKELEQQCREAGYQL   93 (327)
T ss_pred             HHHcCCCCCCccCHHHHHHHHHHHHHh----CCCCCHHHHHhhcCCCceEEEEeCCCCCccHHHHHHHHHHHHHHCCCEE
Confidence            6789985    8888888888777765    3333             45555422 23333445678889999999998


Q ss_pred             eeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEe
Q 027064           72 FDIDLPEQVSEAELISKVHELNVMPDVHGILVQ  104 (229)
Q Consensus        72 ~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq  104 (229)
                      .......  +.++..+.++.+... +++||++.
T Consensus        94 ~i~~~~~--~~~~~~~~~~~l~~~-~vdgiIi~  123 (327)
T TIGR02417        94 LIACSDD--NPDQEKVVIENLLAR-QVDALIVA  123 (327)
T ss_pred             EEEeCCC--CHHHHHHHHHHHHHc-CCCEEEEe
Confidence            7765543  334445566665443 69999986

Members of this family belong the lacI helix-turn-helix family (pfam00356) of DNA-binding transcriptional regulators. All members are from the proteobacteria. Characterized members act as positive and negative transcriptional regulators of fructose and sucrose transport and metabolism. Sucrose is a disaccharide composed of fructose and glucose; D-fructose-1-phosphate rather than an intact sucrose moiety has been shown to act as the inducer.

>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional

Probab=92.59  E-value=0.44  Score=48.18  Aligned_cols=34  Identities=29%  Similarity=0.400  Sum_probs=31.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ..||+|+|||+|.. |..+|..|.++|..|+++..
T Consensus       429 ~~~~~V~IIGaGpA-Gl~aA~~l~~~G~~V~v~e~  462 (752)
T PRK12778        429 KNGKKVAVIGSGPA-GLSFAGDLAKRGYDVTVFEA  462 (752)
T ss_pred             CCCCEEEEECcCHH-HHHHHHHHHHCCCeEEEEec
Confidence            46999999999997 99999999999999999965

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.59  E-value=0.19  Score=42.53  Aligned_cols=33  Identities=27%  Similarity=0.418  Sum_probs=30.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      +.||+++|.|++.-+|+.++..|+++|++|.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~   34 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVN   34 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            468999999999999999999999999998764

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=92.57  E-value=0.61  Score=42.58  Aligned_cols=51  Identities=29%  Similarity=0.376  Sum_probs=34.5

Q ss_pred             ccCCHHHHHHHH-HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          147 LPCTPKGCLELL-KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       147 ~PcTa~av~~lL-~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      ++|.....+..+ +..++ -.|.+|+|.|.|. +|..+++++..+|+ .|+++.+
T Consensus       172 ~~~~~~ta~~~~~~~~~i-~~g~~VlV~G~G~-vG~~a~~lak~~G~~~Vi~~~~  224 (371)
T cd08281         172 FGCAVLTGVGAVVNTAGV-RPGQSVAVVGLGG-VGLSALLGAVAAGASQVVAVDL  224 (371)
T ss_pred             hcchHHHHHHHHHhccCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCcEEEEcC
Confidence            344433334333 33333 3689999999865 69999999999999 5776643

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=92.55  E-value=0.15  Score=45.55  Aligned_cols=35  Identities=23%  Similarity=0.179  Sum_probs=31.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ..||+++|.|++.-+|+.++..|+++|++|+++.+
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r   38 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACR   38 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC
Confidence            57899999999998999999999999999988754

>TIGR01087 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase

Probab=92.52  E-value=0.27  Score=46.03  Aligned_cols=52  Identities=23%  Similarity=0.371  Sum_probs=39.4

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----C----HH-------------hhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----D----PE-------------SIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----~----l~-------------~~~~~aDivisA~g~p  221 (229)
                      ++.|||-|.. |+++|.+|.++|++|++++....    .    +.             +.+..+|+||...|.|
T Consensus         1 ~~~~iG~G~~-G~a~a~~l~~~G~~V~~sD~~~~~~~~~~~~~~~~~~gi~~~~g~~~~~~~~~d~vv~sp~i~   73 (433)
T TIGR01087         1 KILILGLGKT-GRAVARFLHKKGAEVTVTDLKPNEELEPSMGQLRLNEGSVLHTGLHLEDLNNADLVVKSPGIP   73 (433)
T ss_pred             CEEEEEeCHh-HHHHHHHHHHCCCEEEEEeCCCCccchhHHHHHhhccCcEEEecCchHHhccCCEEEECCCCC
Confidence            4789999997 99999999999999999986421    1    11             1134578888877765

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=92.52  E-value=0.24  Score=42.06  Aligned_cols=39  Identities=26%  Similarity=0.402  Sum_probs=34.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      .+.+|.++|.|+|.-+|+.++..|.++|++|+++.+.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~   40 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSE   40 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence            467999999999988899999999999999888876643

>PRK05855 short chain dehydrogenase; Validated

Probab=92.49  E-value=0.26  Score=46.89  Aligned_cols=37  Identities=24%  Similarity=0.325  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+.+++++|+|+|.-+|+.++..|.++|++|+++.+.
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~  348 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDID  348 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4678999999999999999999999999999988664

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=92.48  E-value=0.38  Score=44.07  Aligned_cols=55  Identities=15%  Similarity=0.329  Sum_probs=40.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC-------EEEEEcCCC--------------------------CCHHhhhccCcEE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA-------TVTIVHSHT--------------------------TDPESIVREADIV  214 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a-------tVtv~~~~t--------------------------~~l~~~~~~aDiv  214 (229)
                      ++|.|||+++.||-.++..|..+|.       .+.+.+...                          .+..+.+++||||
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDiv   82 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADWA   82 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCEE
Confidence            5899999955579999999987654       355554411                          1233668999999


Q ss_pred             EEecCCCC
Q 027064          215 IAAAGQAM  222 (229)
Q Consensus       215 isA~g~p~  222 (229)
                      |.+.|.|.
T Consensus        83 vitaG~~~   90 (322)
T cd01338          83 LLVGAKPR   90 (322)
T ss_pred             EEeCCCCC
Confidence            99999874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02858 fructose-bisphosphate aldolase

Probab=92.47  E-value=0.25  Score=53.50  Aligned_cols=56  Identities=14%  Similarity=0.225  Sum_probs=47.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g~p~  222 (229)
                      ++++|-+||-|.+ |.|+|..|++.|.+|++.|+...              +..+..++||+||+....+.
T Consensus         3 ~~~~IGfIGLG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~   72 (1378)
T PLN02858          3 SAGVVGFVGLDSL-SFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPD   72 (1378)
T ss_pred             CCCeEEEEchhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChH
Confidence            4678999999996 99999999999999999987421              45577889999999976543

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=92.47  E-value=0.27  Score=47.49  Aligned_cols=54  Identities=28%  Similarity=0.336  Sum_probs=41.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCC---------------------------------CCHHhhhccCc
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHT---------------------------------TDPESIVREAD  212 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t---------------------------------~~l~~~~~~aD  212 (229)
                      .+|+|||.|- ||.|+|..|+.+|  .+|+.++...                                 .+..+.+++||
T Consensus         2 m~I~ViG~Gy-vGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~ad   80 (473)
T PLN02353          2 VKICCIGAGY-VGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEAD   80 (473)
T ss_pred             CEEEEECCCH-HHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcCC
Confidence            4799999999 5999999999885  6787774311                                 12234578899


Q ss_pred             EEEEecCCCC
Q 027064          213 IVIAAAGQAM  222 (229)
Q Consensus       213 ivisA~g~p~  222 (229)
                      ++|.++|-|-
T Consensus        81 vi~I~V~TP~   90 (473)
T PLN02353         81 IVFVSVNTPT   90 (473)
T ss_pred             EEEEEeCCCC
Confidence            9999999884

>PRK07074 short chain dehydrogenase; Provisional

Probab=92.46  E-value=0.17  Score=43.20  Aligned_cols=34  Identities=21%  Similarity=0.282  Sum_probs=30.6

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|.++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~   35 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDID   35 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5889999998889999999999999999888654

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=92.44  E-value=0.51  Score=44.24  Aligned_cols=61  Identities=21%  Similarity=0.303  Sum_probs=49.3

Q ss_pred             CCCCCeEEEEccc---------hhhhHHHHHHHhhCCCEEEEEcCCC-----------CCHHhhhccCcEEEEecCCCCC
Q 027064          164 TIKGKRAVVVGRS---------NIVGLPVSLLLLKADATVTIVHSHT-----------TDPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       164 ~l~gk~v~ViG~s---------~~VG~pla~~L~~~~atVtv~~~~t-----------~~l~~~~~~aDivisA~g~p~~  223 (229)
                      ++.|++|.|.|-+         +.-...++..|.++|+.|.+.+-..           .++.+.++.||.||.+|..+.|
T Consensus       310 ~~~~~~v~vlGlafK~~t~d~r~sp~~~~~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~ad~~v~~t~~~~~  389 (411)
T TIGR03026       310 PLKGKTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPLVPEEEVKGLPLIDDLEEALKGADALVILTDHDEF  389 (411)
T ss_pred             cccCCEEEEEeeEecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChhhhhhcccCCCHHHHHhCCCEEEEecCCHHH
Confidence            5799999999953         2236788999999999999886542           2566788999999999999887


Q ss_pred             C
Q 027064          224 V  224 (229)
Q Consensus       224 i  224 (229)
                      -
T Consensus       390 ~  390 (411)
T TIGR03026       390 K  390 (411)
T ss_pred             h
Confidence            4

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.43  E-value=0.21  Score=45.05  Aligned_cols=35  Identities=26%  Similarity=0.354  Sum_probs=30.5

Q ss_pred             CCCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEE
Q 027064          163 VTIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       163 ~~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~  197 (229)
                      +++.||.++|-|.|  .-+|+.+|..|+++||+|.++
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~   40 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVG   40 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence            56899999999994  335999999999999999885

>PLN02572 UDP-sulfoquinovose synthase

Probab=92.43  E-value=0.18  Score=47.82  Aligned_cols=35  Identities=31%  Similarity=0.432  Sum_probs=32.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      .+++|+|+|.|+++.+|+.++..|+++|++|++++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d   78 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVD   78 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEe
Confidence            57899999999999999999999999999999864

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=92.41  E-value=0.57  Score=42.23  Aligned_cols=65  Identities=17%  Similarity=0.263  Sum_probs=43.8

Q ss_pred             HHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC-------------------CCHHhhhc---cCc
Q 027064          156 ELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT-------------------TDPESIVR---EAD  212 (229)
Q Consensus       156 ~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t-------------------~~l~~~~~---~aD  212 (229)
                      ..+++.+. ..|.+|+|+|.|. ||..+++++...|+ .|+++.+..                   .+..+..+   ..|
T Consensus       160 ~al~~~~~-~~g~~VlV~G~G~-vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D  237 (343)
T PRK09880        160 HAAHQAGD-LQGKRVFVSGVGP-IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFD  237 (343)
T ss_pred             HHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCC
Confidence            33444443 3799999999876 69999999999999 566554321                   12222222   269


Q ss_pred             EEEEecCCCC
Q 027064          213 IVIAAAGQAM  222 (229)
Q Consensus       213 ivisA~g~p~  222 (229)
                      ++|.++|.+.
T Consensus       238 ~vid~~G~~~  247 (343)
T PRK09880        238 VSFEVSGHPS  247 (343)
T ss_pred             EEEECCCCHH
Confidence            9999999764

>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=92.41  E-value=0.3  Score=49.01  Aligned_cols=52  Identities=27%  Similarity=0.308  Sum_probs=41.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCC----------------CCHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHT----------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t----------------~~l~~~~~~aDivisA~g~  220 (229)
                      ++|.|||.|.+ |..++..|.+.|  ..|+++++..                .++.+.+.++|+||.|++.
T Consensus         4 ~~I~IIG~G~m-G~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~   73 (735)
T PRK14806          4 GRVVVIGLGLI-GGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPV   73 (735)
T ss_pred             cEEEEEeeCHH-HHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCH
Confidence            78999999995 999999999988  4788876542                2344557899999999873

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=92.39  E-value=0.3  Score=43.42  Aligned_cols=51  Identities=12%  Similarity=0.219  Sum_probs=39.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC----CEEEEEcCCC-----------------CCHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD----ATVTIVHSHT-----------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~----atVtv~~~~t-----------------~~l~~~~~~aDivisA~g  219 (229)
                      .++.|||.|.+ |..++..|.+.|    ..|++++++.                 .+..+..+++|+||.|+.
T Consensus         2 ~~I~iIG~G~m-G~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavp   73 (277)
T PRK06928          2 EKIGFIGYGSM-ADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVP   73 (277)
T ss_pred             CEEEEECccHH-HHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecC
Confidence            36899999996 999999999887    5677775532                 133455778999999987

>TIGR02415 23BDH acetoin reductases

Probab=92.35  E-value=0.16  Score=43.06  Aligned_cols=33  Identities=24%  Similarity=0.281  Sum_probs=29.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      |.++|.|.+..+|+.++..|+++|+.|+++.+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~   33 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLN   33 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            679999999989999999999999998877653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=92.35  E-value=0.61  Score=42.31  Aligned_cols=52  Identities=23%  Similarity=0.234  Sum_probs=34.5

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHS  199 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~  199 (229)
                      ++|...+.+..+.....--.|.+|+|.|.|. ||..++.++...|++ |+.+.+
T Consensus       157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~-vG~~a~~~ak~~G~~~Vi~~~~  209 (358)
T TIGR03451       157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGG-VGDAAIAGAALAGASKIIAVDI  209 (358)
T ss_pred             hcccchhhHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcC
Confidence            3444434343333222223699999999765 699999999999995 776643

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=92.35  E-value=0.45  Score=42.39  Aligned_cols=58  Identities=16%  Similarity=0.252  Sum_probs=40.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCCCCCHH-----------h-hhccCcEEEEecCCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSHTTDPE-----------S-IVREADIVIAAAGQAMM  223 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~t~~l~-----------~-~~~~aDivisA~g~p~~  223 (229)
                      ..|++++|+|.|. ||..+++++...|++ |.++......+.           + .-..+|+||.++|.+..
T Consensus       143 ~~~~~vlV~G~G~-vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~~~~g~Dvvid~~G~~~~  213 (308)
T TIGR01202       143 VKVLPDLIVGHGT-LGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDASGDPSL  213 (308)
T ss_pred             cCCCcEEEECCCH-HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhccCCCCCEEEECCCCHHH
Confidence            3689999999887 699999999999997 445533211111           0 11247999999998753

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.34  E-value=0.41  Score=44.26  Aligned_cols=72  Identities=22%  Similarity=0.344  Sum_probs=57.9

Q ss_pred             CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhc--cCcEEEEecCCCC
Q 027064          149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVR--EADIVIAAAGQAM  222 (229)
Q Consensus       149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~--~aDivisA~g~p~  222 (229)
                      |----+..-|++++.. .||++.|+|.|+ +|--..++-.+.|+.|++..+..+..+++++  -||..|.++.-|.
T Consensus       165 CaGITvYspLk~~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d  238 (360)
T KOG0023|consen  165 CAGITVYSPLKRSGLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPD  238 (360)
T ss_pred             hcceEEeehhHHcCCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHH
Confidence            4334456778999988 999999999999 7999999989999999999877666677766  4888887775443

>PRK04148 hypothetical protein; Provisional

Probab=92.32  E-value=0.45  Score=38.46  Aligned_cols=43  Identities=19%  Similarity=0.196  Sum_probs=34.0

Q ss_pred             HHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          156 ELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       156 ~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.|.++....+|+++++||-| . |..+|..|.+.|+.|+.++..
T Consensus         6 ~~l~~~~~~~~~~kileIG~G-f-G~~vA~~L~~~G~~ViaIDi~   48 (134)
T PRK04148          6 EFIAENYEKGKNKKIVELGIG-F-YFKVAKKLKESGFDVIVIDIN   48 (134)
T ss_pred             HHHHHhcccccCCEEEEEEec-C-CHHHHHHHHHCCCEEEEEECC
Confidence            344444344578999999999 4 999999999999999998764

>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional

Probab=92.30  E-value=0.39  Score=47.92  Aligned_cols=34  Identities=29%  Similarity=0.568  Sum_probs=31.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .||+|+|||+|.. |..+|..|..+|..|+++...
T Consensus       192 ~~k~VaIIGaGpA-Gl~aA~~La~~G~~Vtv~e~~  225 (652)
T PRK12814        192 SGKKVAIIGAGPA-GLTAAYYLLRKGHDVTIFDAN  225 (652)
T ss_pred             CCCEEEEECCCHH-HHHHHHHHHHCCCcEEEEecC
Confidence            6899999999997 999999999999999998653

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=92.28  E-value=0.31  Score=44.63  Aligned_cols=54  Identities=24%  Similarity=0.294  Sum_probs=38.1

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCE---EEEEcCCC---C------------CHH-hhhccCcEEEEecCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADAT---VTIVHSHT---T------------DPE-SIVREADIVIAAAGQ  220 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~at---Vtv~~~~t---~------------~l~-~~~~~aDivisA~g~  220 (229)
                      +.+|.|+|+++.+|+-+..+|.+++..   +....+..   +            ++. ..+..+|+||.|+|.
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~   73 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGG   73 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCCh
Confidence            468999999999999999999997653   34443321   0            111 223678999999874

>PLN02852 ferredoxin-NADP+ reductase

Probab=92.28  E-value=0.38  Score=46.67  Aligned_cols=35  Identities=29%  Similarity=0.295  Sum_probs=30.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhh--CCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLK--ADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~--~~atVtv~~~~  200 (229)
                      -.+|+|+|||+|.. |...|..|++  .|+.|+++.+.
T Consensus        24 ~~~~~VaIVGaGPA-Gl~AA~~L~~~~~g~~Vtv~E~~   60 (491)
T PLN02852         24 SEPLHVCVVGSGPA-GFYTADKLLKAHDGARVDIIERL   60 (491)
T ss_pred             CCCCcEEEECccHH-HHHHHHHHHhhCCCCeEEEEecC
Confidence            35799999999998 9999999986  79999999663

>PLN02583 cinnamoyl-CoA reductase

Probab=92.25  E-value=0.24  Score=43.96  Aligned_cols=36  Identities=25%  Similarity=0.181  Sum_probs=32.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +-++|+|+|.|+++.+|+.++..|+++|+.|+.+.+
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R   38 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQ   38 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence            346899999999999999999999999999987754

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional

Probab=92.23  E-value=0.36  Score=45.08  Aligned_cols=52  Identities=21%  Similarity=0.293  Sum_probs=41.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC-------CEEEEEcCC---------------------------------CCCHHhh
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD-------ATVTIVHSH---------------------------------TTDPESI  207 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~-------atVtv~~~~---------------------------------t~~l~~~  207 (229)
                      .+|+|||+|.. |-.+|..|.+.|       .+|++..+.                                 |.|+.+.
T Consensus        12 ~ki~ViGaG~w-GtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~ea   90 (365)
T PTZ00345         12 LKVSVIGSGNW-GSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKEA   90 (365)
T ss_pred             CeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHHH
Confidence            59999999997 999999999876       577764221                                 1256677


Q ss_pred             hccCcEEEEecCC
Q 027064          208 VREADIVIAAAGQ  220 (229)
Q Consensus       208 ~~~aDivisA~g~  220 (229)
                      ++.||+||.|++.
T Consensus        91 v~~aDiIvlAVPs  103 (365)
T PTZ00345         91 VEDADLLIFVIPH  103 (365)
T ss_pred             HhcCCEEEEEcCh
Confidence            8999999999874

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=92.22  E-value=0.29  Score=43.55  Aligned_cols=53  Identities=23%  Similarity=0.402  Sum_probs=40.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----C------HHhhhc--cCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----D------PESIVR--EADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----~------l~~~~~--~aDivisA~g~p  221 (229)
                      ++|+|.|+++.+|..++..|.++| .|+.+.+...    |      +.+.++  +.|+||.+.+..
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~   65 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRKIRPDVIVNAAAHT   65 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence            479999999999999999999999 7877765431    2      223444  479999887643

>PLN02858 fructose-bisphosphate aldolase

Probab=92.19  E-value=0.24  Score=53.54  Aligned_cols=55  Identities=18%  Similarity=0.343  Sum_probs=46.4

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      .++|.+||-|.+ |.|++..|++.|.+|+++++..              .+..+..+++|+||.++..|.
T Consensus       324 ~~~IGfIGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~  392 (1378)
T PLN02858        324 VKRIGFIGLGAM-GFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEV  392 (1378)
T ss_pred             CCeEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChH
Confidence            388999999996 9999999999999999997642              145577889999999988654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	229
4a26_A	300	The Crystal Structure Of Leishmania Major N5,N10- M		9e-62
4a5o_A	286	Crystal Structure Of Pseudomonas Aeruginosa N5, N10		1e-49
3l07_A	285	Methylenetetrahydrofolate DehydrogenaseMETHENYLTETR		2e-49
1b0a_A	288	5,10, Methylene-Tetrahydropholate DehydrogenaseCYCL		2e-49
1dia_A	306	Human Methylenetetrahydrofolate Dehydrogenase Cyclo		2e-47
1a4i_A	301	Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE		3e-47
3p2o_A	285	Crystal Structure Of Fold Bifunctional Protein From		2e-46
4b4u_A	303	Crystal Structure Of Acinetobacter Baumannii N5, N1		7e-46
2c2x_A	281	Three Dimensional Structure Of Bifunctional Methyle		6e-45
3ngl_A	276	Crystal Structure Of Bifunctional 5,10-Methylenetet		1e-21
1edz_A	320	Structure Of The Nad-Dependent 5,10- Methylenetetra		4e-09

>pdb|4A26|A Chain A, The Crystal Structure Of Leishmania Major N5,N10- Methylenetetrahydrofolate DehydrogenaseCYCLOHYDROLASE Length = 300

Iteration: 1
 Score =  233 bits (593), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 122/215 (56%), Positives = 156/215 (72%), Gaps = 3/215 (1%)
Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYG-KVPGLAVVIVGGRKDSQSYVSMKRKACAEV 67
           A IIDGKA+A  IRSE+ ++V  L E YG +VPGLA +IVG R DS+ YV +K KA AEV
Sbjct: 6   AQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEV 65
Query: 68  GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127
           G+ SF+++LPE +S+  L   V +LN  P+ HGI+VQLPLPKH+NE + + +I   KD D
Sbjct: 66  GMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDAD 125
Query: 128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLL 187
              P+N+G L  KGR+P F PCT KG + LLKR G+ + GKRAVV+GRSNIVG PV+ LL
Sbjct: 126 ALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALL 185
Query: 188 LKADATVTIVHSHTTDPESI--VREADIVIAAAGQ 220
           +K +ATVTIVHS T+  + I  +R ADIVIAA GQ
Sbjct: 186 MKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQ 220

>pdb|4A5O|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa N5, N10- Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase (Fold) Length = 286

Iteration: 1
 Score =  192 bits (488), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/216 (48%), Positives = 138/216 (63%), Gaps = 2/216 (0%)
Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A +IDGKA+A  +R +IA+ V    ++  +VPGLAV++VG    SQ YV+ KRK C EVG
Sbjct: 5   AQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVG 64
Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
             S   DLP + S+ +L++ +  LN  P + GILVQLPLP H++   +L  I  +KDVDG
Sbjct: 65  FLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDG 124
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP NIG+LA   R PL  PCTPKG + LL  +G  + G  AVVVG SNIVG P++L LL
Sbjct: 125 FHPYNIGRLAQ--RMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELL 182
Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
               TVT+ H  T D    V  AD+V+ AAG+  +V
Sbjct: 183 LGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLV 218

>pdb|3L07|A Chain A, Methylenetetrahydrofolate DehydrogenaseMETHENYLTETRAHYDROFOLATE Cyclohydrolase, Putative Bifunctional Protein Fold From Francisella Tularensis. Length = 285

Iteration: 1
 Score =  191 bits (486), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/215 (46%), Positives = 138/215 (64%), Gaps = 1/215 (0%)
Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           +IDGK++++ ++  +A +V+         P L  +IVG    S++YV+ K KACA+VGI 
Sbjct: 6   LIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGID 65
Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
           S  I LPE  +E+EL+  + +LN    VH ILVQLPLP HIN+  V+  I  EKDVDGFH
Sbjct: 66  SQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFH 125
Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
           P N+G+L ++ +  L   CTPKG + +L+  G+  +G  AVVVG SN+VG PVS LLL A
Sbjct: 126 PTNVGRLQLRDKKCLE-SCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA 184
Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
            ATVT  H  TTD +S   +ADI+I A G+   +T
Sbjct: 185 KATVTTCHRFTTDLKSHTTKADILIVAVGKPNFIT 219

>pdb|1B0A|A Chain A, 5,10, Methylene-Tetrahydropholate DehydrogenaseCYCLOHYDROLASE FROM E COLI Length = 288

Iteration: 1
 Score =  191 bits (486), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG    SQ YV+ KRKAC EVG
Sbjct: 3   AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVG 62
Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
             S   DLPE  SEAEL+  +  LN    + GILVQLPLP  I+  KVL  I  +KDVDG
Sbjct: 63  FVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG 122
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP N+G+L    R P   PCTP+G + LL+R  +   G  AVV+G SNIVG P+S+ LL
Sbjct: 123 FHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELL 180
Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQ 220
            A  T T+ H  T +    V  AD++I A G+
Sbjct: 181 LAGCTTTVTHRFTKNLRHHVENADLLIVAVGK 212

>pdb|1DIA|A Chain A, Human Methylenetetrahydrofolate Dehydrogenase Cyclohydrolase Complexed With Nadp And Inhibitor Ly249543 Length = 306

Iteration: 1
 Score =  184 bits (468), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/219 (46%), Positives = 138/219 (63%), Gaps = 3/219 (1%)
Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEV 67
           A I++GK ++  IR+ +  +V  L E+  G  P LA++ VG R DS  Y+++K KA  E+
Sbjct: 4   AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 63
Query: 68  GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPL--PKHINEEKVLGEISLEKD 125
           GIK+  I LP   +E+E++  +  LN    VHG LVQLPL     IN E+V+  I+ EKD
Sbjct: 64  GIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKD 123
Query: 126 VDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSL 185
           VDG   +N G+LA    +  F+PCTPKGCLEL+K +GV I G+ AVVVGRS IVG P+  
Sbjct: 124 VDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHD 183
Query: 186 LLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           LLL  +ATVT  HS T   +  V + DI++ A GQ  MV
Sbjct: 184 LLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMV 222

>pdb|1A4I|A Chain A, Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE Length = 301

Iteration: 1
 Score =  184 bits (468), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 102/219 (46%), Positives = 138/219 (63%), Gaps = 3/219 (1%)
Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEV 67
           A I++GK ++  IR+ +  +V  L E+  G  P LA++ VG R DS  Y+++K KA  E+
Sbjct: 4   AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 63
Query: 68  GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPL--PKHINEEKVLGEISLEKD 125
           GIK+  I LP   +E+E++  +  LN    VHG LVQLPL     IN E+V+  I+ EKD
Sbjct: 64  GIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKD 123
Query: 126 VDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSL 185
           VDG   +N G+LA    +  F+PCTPKGCLEL+K +GV I G+ AVVVGRS IVG P+  
Sbjct: 124 VDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHD 183
Query: 186 LLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           LLL  +ATVT  HS T   +  V + DI++ A GQ  MV
Sbjct: 184 LLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMV 222

>pdb|3P2O|A Chain A, Crystal Structure Of Fold Bifunctional Protein From Campylobacter Jejuni Length = 285

Iteration: 1
 Score =  182 bits (461), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/210 (47%), Positives = 136/210 (64%), Gaps = 2/210 (0%)
Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
           T++DGKA++  I+ E+ E+ + L  K G    LAV++VG    SQ+YV  K KAC E GI
Sbjct: 5   TLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGI 63
Query: 70  KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
           KS    L E +++ EL++ ++ LN    VHGILVQLPLP HI ++ +L  I   KDVDGF
Sbjct: 64  KSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGF 123
Query: 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK 189
           HP+N+G L + G +  FLPCTP G  +LLK   + ++GK AV++G SNIVG P +  LL 
Sbjct: 124 HPINVGYLNL-GLESGFLPCTPLGVXKLLKAYEIDLEGKDAVIIGASNIVGRPXATXLLN 182
Query: 190 ADATVTIVHSHTTDPESIVREADIVIAAAG 219
           A ATV++ H  T D     R+AD++I AAG
Sbjct: 183 AGATVSVCHIKTKDLSLYTRQADLIIVAAG 212

>pdb|4B4U|A Chain A, Crystal Structure Of Acinetobacter Baumannii N5, N10-Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase (Fold) Complexed With Nadp Cofactor Length = 303

Iteration: 1
 Score =  180 bits (456), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 91/216 (42%), Positives = 139/216 (64%), Gaps = 2/216 (0%)
Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A ++DG+A+A+ I   +   V  L  K G+ P LA ++VG    S +YV MK  AC  VG
Sbjct: 23  ALVLDGRALAKQIEENLLVRVEALKAKTGRTPILATILVGDDGASATYVRMKGNACRRVG 82
Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           + S  I+LP++ +  +L++++ +LN  PDVHGIL+Q P+P  I+E      ISL KDVDG
Sbjct: 83  MDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDG 142
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
              L  G++AM   +  +   TP G + +LK + + I GK AVVVGRS I+G P++++LL
Sbjct: 143 VTCLGFGRMAMG--EAAYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLL 200
Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMV 224
           +A+ATVTI HS T +   +V++ADI++ A G+A ++
Sbjct: 201 QANATVTICHSRTQNLPELVKQADIIVGAVGKAELI 236

>pdb|2C2X|A Chain A, Three Dimensional Structure Of Bifunctional Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase From Mycobacterium Tuberculosis Length = 281

Iteration: 1
 Score =  177 bits (448), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 95/219 (43%), Positives = 132/219 (60%), Gaps = 5/219 (2%)
Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A ++DGKA    I  ++ + V  L +  G+ PGL  ++VG    SQ+YV  K   CA+VG
Sbjct: 3   AIMLDGKATRDEIFGDLKQRVAAL-DAAGRTPGLGTILVGDDPGSQAYVRGKHADCAKVG 61
Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I S   DLP  +S A L   + ELN  PD  G +VQLPLPKH++E   L  +   KD DG
Sbjct: 62  ITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADG 121
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
            HP N+G+L +    P  LPCTP+G + LL+R  ++I G   VV+GR   VG P+ LLL 
Sbjct: 122 LHPTNLGRLVLG--TPAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLT 179
Query: 189 K--ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           +   +ATVT+ H+ T D  ++ R+ADIV+AA G A ++T
Sbjct: 180 RRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLT 218

>pdb|3NGL|A Chain A, Crystal Structure Of Bifunctional 5,10-Methylenetetrahydrofolate Dehydrogenase CYCLOHYDROLASE FROM THERMOPLASMA ACIDOPHILUM Length = 276

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 109/203 (53%), Gaps = 5/203 (2%)
Query: 18  AQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLP 77
            + I  + AE +  + E+ G  P L ++ +G  + +  Y   K +   ++GI + D++  
Sbjct: 6   GEEIAEKKAENLHGIIERSGLEPSLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKY 64
Query: 78  EQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKL 137
           + +S  +L+ ++ +L   P ++GI+++ PLPK  +  +++  I   KDVD   P N G +
Sbjct: 65  DDISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLI 124
Query: 138 AMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV 197
           A+       +P TP+  ++++   G         +V RS +VG P+S++LL  + TV++ 
Sbjct: 125 ALNRE--FLVPATPRAVIDIMDYYGY--HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVC 180
Query: 198 HSHTTDPESIVREADIVIAAAGQ 220
           HS T D  S+ R + IV+ A G+
Sbjct: 181 HSKTKDIGSMTRSSKIVVVAVGR 203

>pdb|1EDZ|A Chain A, Structure Of The Nad-Dependent 5,10- Methylenetetrahydrofolate Dehydrogenase From Saccharomyces Cerevisiae Length = 320

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 10  TIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           TI+  K VA+T  +EI   V    + + G+ P L   +      ++ Y +  +K    +G
Sbjct: 7   TILASK-VAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMG 65
Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
            + +D+ + E     E    + + N    V+GI+V  P+  +  ++ +   +  EKDV+G
Sbjct: 66  FR-YDLRVIEDKDFLE--EAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEG 122
Query: 129 FHPL-------NIGKLAMKGRDPLFLPCTPKGC---LELLK------RSGVTIKGKRAVV 172
            + +       N+  L  + R    LPCTP      LE LK        G  + GK+ +V
Sbjct: 123 LNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIV 182
Query: 173 VGRSNIVGLPVSLLLLKADATVTIV 197
           + RS IVG P++ LL    ATV  V
Sbjct: 183 INRSEIVGRPLAALLANDGATVYSV 207

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	229
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	1e-129
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	1e-128
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	1e-126
3l07_A	285	Bifunctional protein fold; structural genomics, ID	1e-126
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	1e-125
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	1e-125
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	1e-119
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	1e-115
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	2e-99

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} Length = 300

 Score =  364 bits (937), Expect = e-129
 Identities = 123/220 (55%), Positives = 155/220 (70%), Gaps = 3/220 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEV 67
           A IIDGKA+A  IRSE+ ++V  L E Y G+VPGLA +IVG R DS+ YV +K KA AEV
Sbjct: 6   AQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEV 65

Query: 68  GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127
           G+ SF+++LPE +S+  L   V +LN  P+ HGI+VQLPLPKH+NE + + +I   KD D
Sbjct: 66  GMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDAD 125

Query: 128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLL 187
              P+N+G L  KGR+P F PCT KG + LLKR G+ + GKRAVV+GRSNIVG PV+ LL
Sbjct: 126 ALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALL 185

Query: 188 LKADATVTIVHSH--TTDPESIVREADIVIAAAGQAMMVT 225
           +K +ATVTIVHS   T D    +R ADIVIAA GQ   V 
Sbjct: 186 MKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVK 225

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* Length = 301

 Score =  362 bits (932), Expect = e-128
 Identities = 102/220 (46%), Positives = 138/220 (62%), Gaps = 3/220 (1%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEV 67
           A I++GK ++  IR+ +  +V  L E+  G  P LA++ VG R DS  Y+++K KA  E+
Sbjct: 4   AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 63

Query: 68  GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKH--INEEKVLGEISLEKD 125
           GIK+  I LP   +E+E++  +  LN    VHG LVQLPL     IN E+V+  I+ EKD
Sbjct: 64  GIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKD 123

Query: 126 VDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSL 185
           VDG   +N G+LA    +  F+PCTPKGCLEL+K +GV I G+ AVVVGRS IVG P+  
Sbjct: 124 VDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHD 183

Query: 186 LLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           LLL  +ATVT  HS T   +  V + DI++ A GQ  MV 
Sbjct: 184 LLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVK 223

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} Length = 286

 Score =  357 bits (919), Expect = e-126
 Identities = 105/217 (48%), Positives = 138/217 (63%), Gaps = 2/217 (0%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A +IDGKA+A  +R +IA+ V    ++  +VPGLAV++VG    SQ YV+ KRK C EVG
Sbjct: 5   AQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVG 64

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
             S   DLP + S+ +L++ +  LN  P + GILVQLPLP H++   +L  I  +KDVDG
Sbjct: 65  FLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDG 124

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP NIG+LA   R PL  PCTPKG + LL  +G  + G  AVVVG SNIVG P++L LL
Sbjct: 125 FHPYNIGRLAQ--RMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELL 182

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
               TVT+ H  T D    V  AD+V+ AAG+  +V 
Sbjct: 183 LGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVK 219

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} Length = 285

 Score =  356 bits (917), Expect = e-126
 Identities = 99/217 (45%), Positives = 137/217 (63%), Gaps = 1/217 (0%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
             +IDGK++++ ++  +A +V+         P L  +IVG    S++YV+ K KACA+VG
Sbjct: 4   MILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVG 63

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I S  I LPE  +E+EL+  + +LN    VH ILVQLPLP HIN+  V+  I  EKDVDG
Sbjct: 64  IDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDG 123

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP N+G+L ++ +      CTPKG + +L+  G+  +G  AVVVG SN+VG PVS LLL
Sbjct: 124 FHPTNVGRLQLRDK-KCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLL 182

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
            A ATVT  H  TTD +S   +ADI+I A G+   +T
Sbjct: 183 NAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFIT 219

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 Length = 288

 Score =  355 bits (914), Expect = e-125
 Identities = 105/217 (48%), Positives = 134/217 (61%), Gaps = 2/217 (0%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG    SQ YV+ KRKAC EVG
Sbjct: 3   AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVG 62

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
             S   DLPE  SEAEL+  +  LN    + GILVQLPLP  I+  KVL  I  +KDVDG
Sbjct: 63  FVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG 122

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP N+G+L    R P   PCTP+G + LL+R  +   G  AVV+G SNIVG P+S+ LL
Sbjct: 123 FHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELL 180

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
            A  T T+ H  T +    V  AD++I A G+   + 
Sbjct: 181 LAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIP 217

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} Length = 285

 Score =  354 bits (910), Expect = e-125
 Identities = 99/217 (45%), Positives = 141/217 (64%), Gaps = 2/217 (0%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
            T++DGKA++  I+ E+ E+ + L  K G    LAV++VG    SQ+YV  K KAC E G
Sbjct: 4   MTLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECG 62

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           IKS    L E +++ EL++ ++ LN    VHGILVQLPLP HI ++ +L  I   KDVDG
Sbjct: 63  IKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDG 122

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP+N+G L + G +  FLPCTP G ++LLK   + ++GK AV++G SNIVG P++ +LL
Sbjct: 123 FHPINVGYLNL-GLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLL 181

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
            A ATV++ H  T D     R+AD++I AAG   ++ 
Sbjct: 182 NAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLR 218

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A Length = 281

 Score =  339 bits (872), Expect = e-119
 Identities = 95/219 (43%), Positives = 131/219 (59%), Gaps = 5/219 (2%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A ++DGKA    I  ++ + V  L    G+ PGL  ++VG    SQ+YV  K   CA+VG
Sbjct: 3   AIMLDGKATRDEIFGDLKQRVAALDAA-GRTPGLGTILVGDDPGSQAYVRGKHADCAKVG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
           I S   DLP  +S A L   + ELN  PD  G +VQLPLPKH++E   L  +   KD DG
Sbjct: 62  ITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADG 121

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
            HP N+G+L +    P  LPCTP+G + LL+R  ++I G   VV+GR   VG P+ LLL 
Sbjct: 122 LHPTNLGRLVL--GTPAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLT 179

Query: 189 K--ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           +   +ATVT+ H+ T D  ++ R+ADIV+AA G A ++T
Sbjct: 180 RRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLT 218

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A Length = 276

 Score =  329 bits (845), Expect = e-115
 Identities = 57/215 (26%), Positives = 111/215 (51%), Gaps = 9/215 (4%)

Query: 11  IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
           I+ G+ +A+     +   +    E+ G  P L ++ +G  + +  Y   K +   ++GI 
Sbjct: 3   ILRGEEIAEKKAENLHGII----ERSGLEPSLKLIQIGDNEAASIYARAKIRRGKKIGIA 58

Query: 71  SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
             D++  + +S  +L+ ++ +L   P ++GI+++ PLPK  +  +++  I   KDVD   
Sbjct: 59  V-DLEKYDDISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALS 117

Query: 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA 190
           P N G +A+       +P TP+  ++++   G         +V RS +VG P+S++LL  
Sbjct: 118 PYNQGLIAL--NREFLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR 173

Query: 191 DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
           + TV++ HS T D  S+ R + IV+ A G+   + 
Sbjct: 174 NYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLN 208

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* Length = 320

 Score =  291 bits (746), Expect = 2e-99
 Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 45/257 (17%)

Query: 7   QKATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACA 65
           +    I    VA+T  +EI   V    + + G+ P L   +      ++ Y +  +K   
Sbjct: 3   KPGRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSE 62

Query: 66  EVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKD 125
            +G +    DL     +  L   + + N    V+GI+V  P+  +  ++ +   +  EKD
Sbjct: 63  SMGFRY---DLRVIEDKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKD 119

Query: 126 VDGFHPLNIGKL-------AMKGRDPLFLPCTPKGCLELLKR---------SGVTIKGKR 169
           V+G + +    L         + R    LPCTP   +++L+           G  + GK+
Sbjct: 120 VEGLNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKK 179

Query: 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD-------------------------P 204
            +V+ RS IVG P++ LL    ATV  V  +                             
Sbjct: 180 CIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLL 239

Query: 205 ESIVREADIVIAAAGQA 221
           +    ++D+VI      
Sbjct: 240 KKCSLDSDVVITGVPSE 256

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	229
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	100.0
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	100.0
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	100.0
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	100.0
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	100.0
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	100.0
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	100.0
3l07_A	285	Bifunctional protein fold; structural genomics, ID	100.0
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	100.0
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	100.0
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	99.81
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	99.78
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	99.78
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	99.77
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	99.75
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	99.74
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	99.63
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	99.6
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	99.5
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	99.48
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	99.46
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	99.46
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	99.44
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	99.42
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	99.34
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	99.31
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	99.21
2dvm_A	439	Malic enzyme, 439AA long hypothetical malate oxido	99.15
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.73
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	98.7
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.64
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	98.55
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	98.44
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.39
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.29
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	98.23
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.98
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	97.95
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.94
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.9
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.9
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	97.86
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.85
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	97.8
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.77
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.75
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.73
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.71
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	97.7
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.66
3nv9_A	487	Malic enzyme; rossmann fold, oxidoreductase; 2.25A	97.65
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	97.61
3oet_A	381	Erythronate-4-phosphate dehydrogenase; structural	97.59
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.55
2o4c_A	380	Erythronate-4-phosphate dehydrogenase; erythronate	97.54
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.5
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	97.47
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	97.46
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	97.44
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	97.43
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	97.43
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	97.41
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	97.41
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	97.39
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	97.38
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	97.36
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	97.36
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	97.36
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	97.36
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.35
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	97.35
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	97.35
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	97.34
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	97.34
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	97.34
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	97.32
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	97.32
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.3
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	97.3
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	97.3
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.29
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	97.29
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	97.28
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.24
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.24
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	97.2
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	97.19
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.11
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.1
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	97.1
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	97.09
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.06
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.06
4f2g_A	309	Otcase 1, ornithine carbamoyltransferase 1; struct	97.05
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.04
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.04
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.02
3csu_A	310	Protein (aspartate carbamoyltransferase); transfer	97.0
3gd5_A	323	Otcase, ornithine carbamoyltransferase; structural	97.0
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.98
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.95
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.94
1ygy_A	529	PGDH, D-3-phosphoglycerate dehydrogenase; oxidored	96.93
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.93
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.89
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.88
1pg5_A	299	Aspartate carbamoyltransferase; 2.60A {Sulfolobus	96.87
3kb6_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	96.84
1gtm_A	419	Glutamate dehydrogenase; oxidoreductase, NAD, NADP	96.83
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	96.82
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.82
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.81
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.79
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.79
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.77
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.77
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.76
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.75
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.75
2ef0_A	301	Ornithine carbamoyltransferase; TTHA1199, thermus	96.74
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	96.74
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	96.74
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.73
2qrj_A	394	Saccharopine dehydrogenase, NAD+, L-lysine- formin	96.73
3tpf_A	307	Otcase, ornithine carbamoyltransferase; structural	96.73
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	96.72
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.72
3aog_A	440	Glutamate dehydrogenase; NAD(H), oxidoreducta; HET	96.71
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.71
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.7
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.7
1ml4_A	308	Aspartate transcarbamoylase; beta pleated sheet, p	96.7
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.69
3sds_A	353	Ornithine carbamoyltransferase, mitochondrial; str	96.69
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.68
3r7f_A	304	Aspartate carbamoyltransferase; aspartate transcar	96.67
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.65
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.65
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	96.63
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.62
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.61
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	96.61
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.61
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.61
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.59
3c85_A	183	Putative glutathione-regulated potassium-efflux S	96.58
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.58
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.58
4ep1_A	340	Otcase, ornithine carbamoyltransferase; structural	96.58
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.56
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	96.56
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.56
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.56
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.55
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.54
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.53
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.51
4a8t_A	339	Putrescine carbamoyltransferase; trabnsferase PALO	96.51
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.51
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.5
3grf_A	328	Ornithine carbamoyltransferase; ornithine transcar	96.5
2i6u_A	307	Otcase, ornithine carbamoyltransferase; X-RAY crys	96.5
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.48
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.48
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.47
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.47
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.47
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.47
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.47
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.46
1pvv_A	315	Otcase, ornithine carbamoyltransferase; dodecamer;	96.46
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.46
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	96.45
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.45
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.43
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.41
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.41
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.4
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.4
1vlv_A	325	Otcase, ornithine carbamoyltransferase; TM1097, st	96.4
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.37
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.36
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	96.36
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.36
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.36
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.36
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.36
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.35
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.34
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.34
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.34
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.33
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	95.32
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.32
4a8p_A	355	Putrescine carbamoyltransferase; ornithine agmatin	96.32
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.32
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	96.31
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.31
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.31
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.31
4ekn_B	306	Aspartate carbamoyltransferase; atcase, aspartate	96.29
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.29
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.28
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.27
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.27
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.26
3d6n_B	291	Aspartate carbamoyltransferase; reactor, chamber,	96.26
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.26
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.25
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.24
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.23
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.22
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.22
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.22
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.21
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	96.21
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	96.2
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.19
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.19
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.19
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.19
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.18
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.18
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.17
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.16
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.16
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	96.16
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.16
4amu_A	365	Ornithine carbamoyltransferase, catabolic; ornithi	96.15
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.15
1dxh_A	335	Ornithine carbamoyltransferase; transcarbamylase;	96.15
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.15
3fr7_A	525	Putative ketol-acid reductoisomerase (OS05G057370	96.14
1oth_A	321	Protein (ornithine transcarbamoylase); transferase	96.14
1o0s_A	605	NAD-ME, NAD-dependent malic enzyme; oxidoreductase	96.13
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.13
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.13
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.13
2w37_A	359	Ornithine carbamoyltransferase, catabolic; transca	96.12
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.12
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	96.12
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.12
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.11
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	96.11
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.1
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.1
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	96.1
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.09
1gq2_A	555	Malic enzyme; oxidoreductase, pigeon liver, NADP-d	96.08
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.08
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.08
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.08
2x5o_A	439	UDP-N-acetylmuramoylalanine--D-glutamate ligase; A	96.08
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.08
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.07
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	96.06
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.05
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	96.04
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	96.03
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.02
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.01
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.01
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.99
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	95.97
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	95.97
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.96
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	95.96
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	95.95
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	95.95
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	95.94
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.94
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	95.93
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.92
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.91
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.9
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.9
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	95.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	95.88
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	95.88
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.88
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	95.88
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	95.87
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	95.86
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.86
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.86
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.86
1duv_G	333	Octase-1, ornithine transcarbamoylase; enzyme-inhi	95.85
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	95.85
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	95.85
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	95.85
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.84
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.82
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.82
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	95.82
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	95.81
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.8
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.8
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.8
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	95.8
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.8
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	95.8
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	95.79
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.79
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	95.79
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	95.78
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	95.77
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	95.76
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.75
3tl2_A	315	Malate dehydrogenase; center for structural genomi	95.75
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.75
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	95.75
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.72
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	95.71
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	95.71
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.7
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	95.7
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.69
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.68
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.68
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.68
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	95.67
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	95.67
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	95.67
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	95.66
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	95.66
1pj3_A	564	NAD-dependent malic enzyme, mitochondrial; oxidati	95.65
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.65
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.64
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	95.63
2duw_A	145	Putative COA-binding protein; ligand binding prote	95.61
1v9l_A	421	Glutamate dehydrogenase; protein-NAD complex, oxid	95.6
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	95.6
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	95.59
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	95.59
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	95.59
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.58
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	95.58
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	95.58
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.57
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	95.57
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.56
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	95.55
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	95.55
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	95.55
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	95.55
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	95.54
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	95.53
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.53
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	95.52
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.52
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	95.52
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	95.52
2yfq_A	421	Padgh, NAD-GDH, NAD-specific glutamate dehydrogena	95.51
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	95.51
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	95.51
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	95.51
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	95.51
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	95.5
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	95.49
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.49
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.49
3rih_A	293	Short chain dehydrogenase or reductase; structural	95.48
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	95.48
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	95.48
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	95.48
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.48
3k92_A	424	NAD-GDH, NAD-specific glutamate dehydrogenase; ROC	95.48
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	95.48
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	95.46
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.43
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	95.43
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	95.42
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	95.41
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	95.41
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.4
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.4
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	95.38
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	95.38
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	95.37
3imf_A	257	Short chain dehydrogenase; structural genomics, in	95.37
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.36
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	95.35
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.35
3q98_A	399	Transcarbamylase; rossmann fold, transferase; 2.00	95.34
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	95.34
2tmg_A	415	Protein (glutamate dehydrogenase); metabolic role,	95.33
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	95.33
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	95.33
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	95.33
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	95.31
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	95.31
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	95.3
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	95.3
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.3
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	95.3
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.29
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	95.29
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	95.29
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	95.29
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	95.28
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	95.28
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.28
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	95.28
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	95.28
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	95.27
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.27
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	95.27
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.27
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	95.27
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	95.25
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	95.25
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	95.24
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	95.24
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.24
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	95.24
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	95.23
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.23
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.23
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	95.23
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	95.23
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.22
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	95.22
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.21
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	95.2
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	95.2
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	95.2
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	95.19
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.19
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	95.19
4f6c_A	427	AUSA reductase domain protein; thioester reductase	95.17
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	95.16
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.16
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	95.16
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	95.15
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.15
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	95.15
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	95.15
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	95.12
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	95.12
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	95.11
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.11
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	95.11
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.11
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	95.1
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	95.1
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.1
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.1
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	95.09
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	95.09
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	95.09
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.09
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.09
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	95.09
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	95.08
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	95.08
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	95.08
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.07
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	95.07
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.05
4h31_A	358	Otcase, ornithine carbamoyltransferase; structural	95.05
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	95.05
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.05
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	95.04
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.03
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	95.03
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	95.03
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.02
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	95.02
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	95.02
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.01
4hv4_A	494	UDP-N-acetylmuramate--L-alanine ligase; MURC, yers	95.01
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	95.01
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	95.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	95.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	95.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	94.99
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	94.99
1xq1_A	266	Putative tropinone reducatse; structural genomics,	94.99
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	94.98
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	94.98
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	94.97
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	94.95
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	94.95
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	94.95
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	94.93
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	94.93
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	94.92
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	94.91
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	94.89
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	94.88
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	94.88
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	94.87
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	94.87
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	94.86
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	94.85
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	94.85
2bma_A	470	Glutamate dehydrogenase (NADP+); malaria, drug des	94.85
4fcc_A	450	Glutamate dehydrogenase; protein complex, rossmann	94.85

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=100.00  E-value=3.7e-77  Score=533.32  Aligned_cols=222  Identities=41%  Similarity=0.723  Sum_probs=217.3

Q ss_pred             cchhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHH
Q 027064            6 DQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAEL   85 (229)
Q Consensus         6 ~~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el   85 (229)
                      ..||+|||||++|++|+++++++++.|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||
T Consensus        20 ~~Ma~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LavIlVG~dpaS~~Yv~~K~k~c~~vGi~s~~~~lp~~~se~el   99 (303)
T 4b4u_A           20 GHMALVLDGRALAKQIEENLLVRVEALKAKTGRTPILATILVGDDGASATYVRMKGNACRRVGMDSLKIELPQETTTEQL   99 (303)
T ss_dssp             --CCEECCHHHHHHHHHHHHHHHHHHHHHHHSCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHH
T ss_pred             CCCCEEeehHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEecCccCCHHHH
Confidence            35799999999999999999999999998889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCC
Q 027064           86 ISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTI  165 (229)
Q Consensus        86 ~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l  165 (229)
                      ++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||+.|+|+|+.|  .+.|+||||.||++||++|++++
T Consensus       100 l~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDG~hp~N~G~L~~g--~~~~~PcTp~gv~~lL~~~~i~l  177 (303)
T 4b4u_A          100 LAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMTILKENNIEI  177 (303)
T ss_dssp             HHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGCTTCCCHHHHHHHHTT--CCCCCCHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCcccccCccCcchHHHhcCC--CCcccCccHHHHHHHHHHHCCCC
Confidence            9999999999999999999999999999999999999999999999999999998  68999999999999999999999


Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +||+|+|||||++||||+|+||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus       178 ~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~~ADIvV~A~G~p~~i~~d~v  241 (303)
T 4b4u_A          178 AGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQKDWI  241 (303)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHHTCSEEEECSCSTTCBCGGGS
T ss_pred             CCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHhhcCCeEEeccCCCCccccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999997

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=100.00  E-value=5.9e-73  Score=504.04  Aligned_cols=221  Identities=47%  Similarity=0.717  Sum_probs=215.6

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      ||+++||||++|++|++++++++++|+++.+++|+||+|+||+||+|.+|+++|.|+|+++||+++.++||++++|+||+
T Consensus         1 ~ma~iidGk~ia~~i~~~~~~~v~~l~~~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell   80 (288)
T 1b0a_A            1 MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELL   80 (288)
T ss_dssp             -CCEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCHHHHH
T ss_pred             CCCeEecHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            67899999999999999999999999988557899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+||||||||.|.|+|+.|  .++|+||||.||+++|++|+++++
T Consensus        81 ~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g--~~~~~PcTp~gi~~ll~~~~i~l~  158 (288)
T 1b0a_A           81 ELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQR--APRLRPCTPRGIVTLLERYNIDTF  158 (288)
T ss_dssp             HHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCT
T ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchhHHhCC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999999999999999999999998  679999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||+|++||+|+|++|+++|||||+|||+|.++.+++++|||||+|+|+|+||+++|+
T Consensus       159 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~lI~~~~v  221 (288)
T 1b0a_A          159 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWI  221 (288)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHHHCSEEEECSCCTTCBCTTTS
T ss_pred             CCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhccCCEEEECCCCcCcCCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999996

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.1e-72  Score=501.96  Aligned_cols=221  Identities=47%  Similarity=0.738  Sum_probs=215.9

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI   86 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~   86 (229)
                      |++++||||++|++|++++++++++|+++++++|+||+|+||+||+|.+|+++|.|+|+++||++++++||++++|+||+
T Consensus         3 m~a~iidGk~ia~~i~~~~~~~v~~l~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell   82 (286)
T 4a5o_A            3 MTAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLL   82 (286)
T ss_dssp             -CCEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHH
T ss_pred             cccEEeeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHH
Confidence            56789999999999999999999999988778899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064           87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~  166 (229)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|+|+|+.|  .+.|+||||+||+++|++|+++++
T Consensus        83 ~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~g~l~~g--~~~~~PcTp~gv~~lL~~~~i~l~  160 (286)
T 4a5o_A           83 ALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGRLAQR--MPLLRPCTPKGIMTLLASTGADLY  160 (286)
T ss_dssp             HHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCT
T ss_pred             HHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcccccccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999999999999999999999999999998  689999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||++||+|+|++|+++|||||+|||+|+++.+++++|||||+|+|+|++|+.+|+
T Consensus       161 Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~~~~ADIVI~Avg~p~~I~~~~v  223 (286)
T 4a5o_A          161 GMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWI  223 (286)
T ss_dssp             TCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHTCSEEEECCCCTTCBCGGGS
T ss_pred             CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHHhccCCEEEECCCCCCCCCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999996

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=100.00  E-value=2.9e-72  Score=502.30  Aligned_cols=224  Identities=54%  Similarity=0.857  Sum_probs=216.8

Q ss_pred             cchhhhcccHHHHHHHHHHHHHHHHHHHhcCC-CCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHH
Q 027064            6 DQKATIIDGKAVAQTIRSEIAEEVRLLSEKYG-KVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAE   84 (229)
Q Consensus         6 ~~~~~il~G~~la~~i~~~i~~~~~~l~~~~~-~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~e   84 (229)
                      .||+++||||++|++|++++++++++|+++++ ++|+||+|+||+||+|..|+++|.|+|+++||++++++||++++|+|
T Consensus         3 ~~ma~iidGk~ia~~i~~~~~~~v~~l~~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~e   82 (300)
T 4a26_A            3 MPSAQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEV   82 (300)
T ss_dssp             --CCEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHH
T ss_pred             CcccEEeehHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHH
Confidence            45789999999999999999999999998877 99999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCC
Q 027064           85 LISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVT  164 (229)
Q Consensus        85 l~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~  164 (229)
                      |++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|+|+|+.|+..++|+||||+||+++|++|+++
T Consensus        83 ll~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~~PcTp~gv~~lL~~~~i~  162 (300)
T 4a26_A           83 LEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIE  162 (300)
T ss_dssp             HHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSCCCHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcccccccCCcceEEEeecCCCcCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999999998545889999999999999999999


Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH--hhhccCcEEEEecCCCCCCCCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE--SIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~--~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ++||+|+|||||++||+|+|++|+++|||||+||++|+++.  +++++|||||+|+|+|++|+.+|+
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l~~~~~~ADIVI~Avg~p~~I~~~~v  229 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWI  229 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHHHHHHHTCSEEEECSCCTTCBCGGGS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhhccCCEEEECCCCCCCCcHHhc
Confidence            99999999999999999999999999999999999999999  999999999999999999999986

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=100.00  E-value=6e-72  Score=500.19  Aligned_cols=223  Identities=46%  Similarity=0.728  Sum_probs=216.1

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcC-CCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAEL   85 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~-~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el   85 (229)
                      |++++||||.+|++|+++++++++.|++++ +++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||
T Consensus         2 m~a~iidGk~ia~~i~~~~~~~v~~l~~~~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~el   81 (301)
T 1a4i_A            2 APAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEV   81 (301)
T ss_dssp             CCCEECCHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHH
T ss_pred             CCCEEeeHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHH
Confidence            457899999999999999999999999885 4789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcEEEEeCCCCCC--CCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCC
Q 027064           86 ISKVHELNVMPDVHGILVQLPLPKH--INEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGV  163 (229)
Q Consensus        86 ~~~I~~lN~d~~v~GIlvq~Plp~~--i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~  163 (229)
                      ++.|++||+|++|||||||+|||+|  +|+++++++|+|+||||||||.|.|+|+.|+..++|+||||.||+++|++|++
T Consensus        82 l~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi~~ll~~~~i  161 (301)
T 1a4i_A           82 MKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGV  161 (301)
T ss_dssp             HHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHTTTC
T ss_pred             HHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHHHHHHHHcCC
Confidence            9999999999999999999999999  99999999999999999999999999999843478999999999999999999


Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +++||+|+|||||++||+|+|++|+++|||||+|||+|.++.+++++|||||+|+|+|+||+.+|+
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~v  227 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWI  227 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHHhccCCEEEECCCCcccCCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999999996

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=100.00  E-value=1.2e-71  Score=494.16  Aligned_cols=218  Identities=44%  Similarity=0.757  Sum_probs=213.6

Q ss_pred             hhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHH
Q 027064            9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISK   88 (229)
Q Consensus         9 ~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~   88 (229)
                      +++||||++|++|+++++++++.|+++ +++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus         3 a~iidGk~ia~~i~~~~~~~v~~l~~~-g~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~   81 (281)
T 2c2x_A            3 AIMLDGKATRDEIFGDLKQRVAALDAA-GRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNET   81 (281)
T ss_dssp             CEECCHHHHHHHHHHHHHHHHHHHHHT-TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHH
T ss_pred             CEEeeHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEEEeCCChhhHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence            578999999999999999999999987 7889999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Q 027064           89 VHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGK  168 (229)
Q Consensus        89 I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk  168 (229)
                      |++||+|++|||||||+|||+|+|+++++++|+|+||||||||+|.|+|+.|  .++|+||||+|++++|++|+++++||
T Consensus        82 i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g--~~~~~PcTp~gi~~ll~~~~i~l~gk  159 (281)
T 2c2x_A           82 IDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLG--TPAPLPCTPRGIVHLLRRYDISIAGA  159 (281)
T ss_dssp             HHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHHHHHT--CCCCCCHHHHHHHHHHHHTTCCCTTC
T ss_pred             HHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHHHHhCC--CCCCCCChHHHHHHHHHHcCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999998  67999999999999999999999999


Q ss_pred             eEEEEccchhhhHHHHHHHhhC--CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~--~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +|+|||||++||+|+|++|+++  |||||+|||+|.++.+++++|||||+|+|+|+||+.+|+
T Consensus       160 ~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~v  222 (281)
T 2c2x_A          160 HVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMV  222 (281)
T ss_dssp             EEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHHHHTTCSEEEECSCCTTCBCGGGS
T ss_pred             EEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHHHHhhCCEEEECCCCCcccCHHHc
Confidence            9999999999999999999999  999999999999999999999999999999999999996

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=100.00  E-value=1.7e-71  Score=494.22  Aligned_cols=219  Identities=45%  Similarity=0.731  Sum_probs=213.3

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      ++++||||++|++|++++++++++|+++ +.+|+||+|+||+||+|.+|+++|.|+|+++||++++++||++++|+||++
T Consensus         3 ~~~iidGk~~a~~i~~~~~~~v~~l~~~-~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~   81 (285)
T 3p2o_A            3 AMTLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLA   81 (285)
T ss_dssp             CCEECCHHHHHHHHHHHHHHHHHHHHTT-TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHH
T ss_pred             CCEEeehHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHH
Confidence            3578999999999999999999999877 569999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCC-cccCCHHHHHHHHHHhCCCCC
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPL-FLPCTPKGCLELLKRSGVTIK  166 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~-~~PcTa~av~~lL~~~~~~l~  166 (229)
                      .|++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|+|+|+.|  .+. |+||||+||+++|++|+++++
T Consensus        82 ~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDg~~~~N~g~l~~g--~~~g~~PcTp~gv~~lL~~~~i~l~  159 (285)
T 3p2o_A           82 LINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLG--LESGFLPCTPLGVMKLLKAYEIDLE  159 (285)
T ss_dssp             HHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTT--CCSSCCCHHHHHHHHHHHHTTCCCT
T ss_pred             HHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcccccccCCHhhhhhhhcC--CCCCCCCCCHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999999999999999999999999999998  566 999999999999999999999


Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ||+|+|||||++||+|+|++|+++|||||+|||+|+++.+++++|||||+|+|+|++|+++|+
T Consensus       160 Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~v  222 (285)
T 3p2o_A          160 GKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMV  222 (285)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHTTCSEEEECSSCTTCBCGGGS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHHHhhcCCEEEECCCCCCcCCHHHc
Confidence            999999999999999999999999999999999999999999999999999999999999996

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=100.00  E-value=2.2e-71  Score=493.53  Aligned_cols=220  Identities=45%  Similarity=0.725  Sum_probs=214.5

Q ss_pred             hhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHH
Q 027064            9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISK   88 (229)
Q Consensus         9 ~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~   88 (229)
                      +++||||++|++|++++++++++|+++++++|+||+|+||+||+|.+|+++|.|+|+++||++++++||++++|+||++.
T Consensus         4 ~~ildGk~ia~~i~~~~~~~v~~l~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~   83 (285)
T 3l07_A            4 MILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLEL   83 (285)
T ss_dssp             CEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHH
T ss_pred             CEEeehHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEECCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHH
Confidence            46899999999999999999999998878999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Q 027064           89 VHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGK  168 (229)
Q Consensus        89 I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk  168 (229)
                      |++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|+|+|+.|. .+.|+||||+||+++|++|+++++||
T Consensus        84 I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~-~~~~~PcTp~gv~~lL~~~~i~l~Gk  162 (285)
T 3l07_A           84 IDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGA  162 (285)
T ss_dssp             HHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHHTC-TTCCCCHHHHHHHHHHHHTTCCCTTC
T ss_pred             HHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcccccccCChhheeehhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999982 28999999999999999999999999


Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +|+|||||++||+|+|++|+++|||||+|||+|+++.+++++|||||+|+|+|++|+++|+
T Consensus       163 ~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~v  223 (285)
T 3l07_A          163 YAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMV  223 (285)
T ss_dssp             EEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGS
T ss_pred             EEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHhcccCCEEEECCCCCCCCCHHHc
Confidence            9999999999999999999999999999999999999999999999999999999999996

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=100.00  E-value=4.4e-70  Score=483.06  Aligned_cols=211  Identities=27%  Similarity=0.541  Sum_probs=206.9

Q ss_pred             hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064           10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV   89 (229)
Q Consensus        10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   89 (229)
                      ++||||++|++|++++++++++|    +++|+||+|+||+||+|.+|+++|.|+|+++|| ++.++||++++|+||++.|
T Consensus         2 ~ildGk~~a~~i~~~~~~~v~~l----~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I   76 (276)
T 3ngx_A            2 KILRGEEIAEKKAENLHGIIERS----GLEPSLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKRI   76 (276)
T ss_dssp             CBCCCHHHHHHHHHHHHHHHHHT----TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTC-EEEEEEESSCCHHHHHHHH
T ss_pred             EEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHCCe-EEEEECCCCCCHHHHHHHH
Confidence            38999999999999999999987    789999999999999999999999999999999 9999999999999999999


Q ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064           90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR  169 (229)
Q Consensus        90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~  169 (229)
                      ++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|.|+|+.|  .++|+||||+||+++|++|+  ++||+
T Consensus        77 ~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~KDVDG~~p~n~G~l~~g--~~~~~PcTp~gv~~lL~~~~--l~Gk~  152 (276)
T 3ngx_A           77 DDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALN--REFLVPATPRAVIDIMDYYG--YHENT  152 (276)
T ss_dssp             HHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGGGBTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHHT--CCSCE
T ss_pred             HHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCCCcccCCCccchhhhhcC--CCCCCCCcHHHHHHHHHHhC--cCCCE
Confidence            999999999999999999999999999999999999999999999999998  68999999999999999998  99999


Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      |+|||||++||+|+|++|+++|||||+|||+|.++.+++++|||||+|+|+|++|+.+|+
T Consensus       153 vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~v  212 (276)
T 3ngx_A          153 VTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMV  212 (276)
T ss_dssp             EEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHHSSEEEECSSCTTCBCGGGC
T ss_pred             EEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhhccCCEEEECCCCCccccHhhc
Confidence            999999999999999999999999999999999999999999999999999999999996

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=100.00  E-value=6.9e-65  Score=459.07  Aligned_cols=220  Identities=23%  Similarity=0.314  Sum_probs=207.1

Q ss_pred             chhhhcccHHHHHHHHHHHHHHHHHHHhcCC-CCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHH
Q 027064            7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYG-KVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAEL   85 (229)
Q Consensus         7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~-~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el   85 (229)
                      |++++|||+++|++|+++++++++.|+++++ ++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++   +||
T Consensus         3 ~~~~~idgk~ia~~i~~~~~~~v~~l~~~~~~~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~l~~~---~~l   79 (320)
T 1edz_A            3 KPGRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDLRVIEDK---DFL   79 (320)
T ss_dssp             CCCEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECCCCHHHHHHHHHHHHHHHHHTCEEEEEECSSG---GGH
T ss_pred             CCCEEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEEECCchhHHHHHHHHHHHHHHcCCEEEEEECCCh---HHH
Confidence            6688999999999999999999999998744 789999999999999999999999999999999999999975   679


Q ss_pred             HHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCC-------CCCcccCCHHHHHHHH
Q 027064           86 ISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGR-------DPLFLPCTPKGCLELL  158 (229)
Q Consensus        86 ~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~-------~~~~~PcTa~av~~lL  158 (229)
                      ++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||+.|.|+|+.|..       .++|+||||.|++++|
T Consensus        80 ~~~i~~lN~d~~v~GIlvqlPlp~~~~~~~i~~~I~p~KDVDG~~~~n~g~l~~~~~~l~~~~~~~~~~PcTp~a~v~ll  159 (320)
T 1edz_A           80 EEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEGLNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVKIL  159 (320)
T ss_dssp             HHHHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTBTTCCSHHHHHHHHTTCCBSSSSSCSBCCCCHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCcCChhhhHHHhcCCccccccccCCCcCCCcHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999998721       2689999999999999


Q ss_pred             HH---------hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC------------------C-----C--CCH
Q 027064          159 KR---------SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS------------------H-----T--TDP  204 (229)
Q Consensus       159 ~~---------~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~------------------~-----t--~~l  204 (229)
                      ++         |++++.||+|+|||+|++||+|+|.+|+++||+||+|++                  .     |  .++
T Consensus       160 ~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L  239 (320)
T 1edz_A          160 EFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLL  239 (320)
T ss_dssp             HHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHH
T ss_pred             HhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHH
Confidence            99         788999999999999999999999999999999999944                  3     3  688


Q ss_pred             HhhhccCcEEEEecCCCCC-CCCCCC
Q 027064          205 ESIVREADIVIAAAGQAMM-VTMGIL  229 (229)
Q Consensus       205 ~~~~~~aDivisA~g~p~~-i~~~~v  229 (229)
                      .+++++|||||+|||+|++ |+.+|+
T Consensus       240 ~e~l~~ADIVIsAtg~p~~vI~~e~v  265 (320)
T 1edz_A          240 KKCSLDSDVVITGVPSENYKFPTEYI  265 (320)
T ss_dssp             HHHHHHCSEEEECCCCTTCCBCTTTS
T ss_pred             HHHhccCCEEEECCCCCcceeCHHHc
Confidence            9999999999999999999 899996

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=99.81  E-value=8.4e-21  Score=166.28  Aligned_cols=163  Identities=18%  Similarity=0.217  Sum_probs=132.6

Q ss_pred             ECCCcccHHHHH-HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCcc-C
Q 027064           47 VGGRKDSQSYVS-MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLE-K  124 (229)
Q Consensus        47 vg~~~~s~~Y~~-~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~-K  124 (229)
                      +| +|-+++|-. ...++|+++|+++.|..|+  +++++|.+.|+.++ +++++|++||+|+|.++  -.+++.++|. |
T Consensus         7 iG-~pi~hS~Sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~-~~~~~G~nVT~P~K~~~--~~~ld~~~~~A~   80 (271)
T 1nyt_A            7 FG-NPIAHSKSPFIHQQFAQQLNIEHPYGRVL--APINDFINTLNAFF-SAGGKGANVTVPFKEEA--FARADELTERAA   80 (271)
T ss_dssp             EE-SSCTTCSHHHHHHHHHHHHTCCCCEEEEE--CCTTCHHHHHHHHH-HTTCCEEEECTTCHHHH--HHHCSEECHHHH
T ss_pred             EC-CCcccccCHHHHHHHHHHCCCCcEEEEEE--cCHHHHHHHHHHHH-hCCCCeEEEccCCHHHH--HHHHhhcCHHHH
Confidence            35 677888776 7889999999999999996  67889999999999 67899999999999654  3455566686 8


Q ss_pred             cccccCcc---chhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          125 DVDGFHPL---NIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       125 DVDg~~~~---N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ++.+++.+   +-|+++ |      .+|++.|+++.|++++++++||+++|+|+|+ +|++++..|.+.|++|++++++.
T Consensus        81 ~igavNti~~~~~g~l~-G------~ntD~~G~~~~L~~~~~~l~~k~vlViGaGg-~g~a~a~~L~~~G~~V~v~~R~~  152 (271)
T 1nyt_A           81 LAGAVNTLMRLEDGRLL-G------DNTDGVGLLSDLERLSFIRPGLRILLIGAGG-ASRGVLLPLLSLDCAVTITNRTV  152 (271)
T ss_dssp             HHTCCSEEEECTTSCEE-E------ECCHHHHHHHHHHHHTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSH
T ss_pred             HhCCceEEEEcCCCeEE-E------eCCCHHHHHHHHHhcCcCcCCCEEEEECCcH-HHHHHHHHHHHcCCEEEEEECCH
Confidence            88888875   445542 2      3789999999999999999999999999998 59999999999999999998863


Q ss_pred             C---CHHh--------------hh--ccCcEEEEecCCCCC
Q 027064          202 T---DPES--------------IV--READIVIAAAGQAMM  223 (229)
Q Consensus       202 ~---~l~~--------------~~--~~aDivisA~g~p~~  223 (229)
                      .   .+.+              .+  ..+|+||++||.+..
T Consensus       153 ~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          153 SRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGIS  193 (271)
T ss_dssp             HHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGG
T ss_pred             HHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCC
Confidence            2   1111              11  378999999997654

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=99.78  E-value=1.3e-19  Score=158.94  Aligned_cols=163  Identities=18%  Similarity=0.278  Sum_probs=135.8

Q ss_pred             EECCCcccHHHHHHH-HHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCcc-
Q 027064           46 IVGGRKDSQSYVSMK-RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLE-  123 (229)
Q Consensus        46 ~vg~~~~s~~Y~~~k-~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~-  123 (229)
                      ++| +|.+++|.... .++|+++|+++.|..|+  +++++|.+.++.++. ++++|++|+.|++.++  -..++.++|. 
T Consensus        17 liG-~pi~hs~sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~~-~~~~G~nvtiP~k~~i--~~~ld~l~~~A   90 (275)
T 2hk9_A           17 VIG-FPVKHSLSPVFQNALIRYAGLNAVYLAFE--INPEELKKAFEGFKA-LKVKGINVTVPFKEEI--IPLLDYVEDTA   90 (275)
T ss_dssp             EEE-SSCTTCSHHHHHHHHHHHHTCSEEEEEEE--CCGGGHHHHHHHHHH-HTCCEEEECTTSTTTT--GGGCSEECHHH
T ss_pred             EEC-CCcccccCHHHHHHHHHHcCCCcEEEEEE--CCHHHHHHHHHHHHh-CCCCEEEECccCHHHH--HHHHHHhhHHH
Confidence            457 99999999755 49999999999999996  778999999999984 5899999999999766  3455666775 


Q ss_pred             CcccccCcc--chhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          124 KDVDGFHPL--NIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       124 KDVDg~~~~--N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++.+++.+  +.|++. |      .++++.|++..|++++++++|++++|||.|.+ |++++..|.+.|++|+++++..
T Consensus        91 ~~~gavnti~~~~g~~~-g------~nTd~~G~~~~l~~~~~~~~~~~v~iiGaG~~-g~aia~~L~~~g~~V~v~~r~~  162 (275)
T 2hk9_A           91 KEIGAVNTVKFENGKAY-G------YNTDWIGFLKSLKSLIPEVKEKSILVLGAGGA-SRAVIYALVKEGAKVFLWNRTK  162 (275)
T ss_dssp             HHHTCCCEEEEETTEEE-E------ECCHHHHHHHHHHHHCTTGGGSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSSH
T ss_pred             HHhCCcceEEeeCCEEE-e------ecCCHHHHHHHHHHhCCCcCCCEEEEECchHH-HHHHHHHHHHcCCEEEEEECCH
Confidence            788888766  344442 2      37899999999999999999999999999985 9999999999999999998853


Q ss_pred             C---------------CHHhhhccCcEEEEecCCCC
Q 027064          202 T---------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       202 ~---------------~l~~~~~~aDivisA~g~p~  222 (229)
                      .               ++.+.++++|+||+||+.+.
T Consensus       163 ~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~  198 (275)
T 2hk9_A          163 EKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGL  198 (275)
T ss_dssp             HHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTS
T ss_pred             HHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCC
Confidence            1               55567889999999998664

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=99.78  E-value=1.2e-19  Score=160.01  Aligned_cols=162  Identities=19%  Similarity=0.253  Sum_probs=128.9

Q ss_pred             ECCCcccHHHHHHH-HHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064           47 VGGRKDSQSYVSMK-RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK  124 (229)
Q Consensus        47 vg~~~~s~~Y~~~k-~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K  124 (229)
                      +| +|.+++|-... .++|+++|+++.|..|+  +++++|.+.|+.+|++ +++|++||+|+|+++  -..++.++| .+
T Consensus        17 iG-~pi~hS~Sp~~h~~~~~~~gi~~~y~~~~--~~~~~l~~~i~~l~~~-~~~G~nVtiP~k~~i--~~~~d~~~~~a~   90 (287)
T 1nvt_A           17 IG-HPVEHSFSPIMHNAAFKDKGLNYVYVAFD--VLPENLKYVIDGAKAL-GIVGFNVTIPHKIEI--MKYLDEIDKDAQ   90 (287)
T ss_dssp             EE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEE--CCGGGGGGHHHHHHHH-TCCEEEECTTSTTGG--GGGCSEECHHHH
T ss_pred             EC-CCcccccCHHHHHHHHHHcCCCcEEEEEE--cCHHHHHHHHHHHHhC-CCCEEEEccCCHHHH--HHHHHhcCHHHH
Confidence            36 78999999888 89999999999999995  7789999999999965 899999999999876  223334445 35


Q ss_pred             cccccCcc--chhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          125 DVDGFHPL--NIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       125 DVDg~~~~--N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      ++..++..  +.|+++ |      .++|+.|+++.|++++++++||+++|+|+|+ +|++++..|++.| +|++++++..
T Consensus        91 ~igavnt~~~~~g~l~-g------~nTd~~G~~~~L~~~~~~l~~k~vlV~GaGg-iG~aia~~L~~~G-~V~v~~r~~~  161 (287)
T 1nvt_A           91 LIGAVNTIKIEDGKAI-G------YNTDGIGARMALEEEIGRVKDKNIVIYGAGG-AARAVAFELAKDN-NIIIANRTVE  161 (287)
T ss_dssp             HHTCCCEEEEETTEEE-E------ECCHHHHHHHHHHHHHCCCCSCEEEEECCSH-HHHHHHHHHTSSS-EEEEECSSHH
T ss_pred             HhCceeeEEeeCCEEE-E------ecCCHHHHHHHHHHhCCCcCCCEEEEECchH-HHHHHHHHHHHCC-CEEEEECCHH
Confidence            55555543  344443 2      2679999999999999999999999999996 5999999999999 9999988642


Q ss_pred             C---H---------------------HhhhccCcEEEEecCCCCC
Q 027064          203 D---P---------------------ESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       203 ~---l---------------------~~~~~~aDivisA~g~p~~  223 (229)
                      .   +                     .+.+.++|+||+++|.+..
T Consensus       162 ~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~~~~  206 (287)
T 1nvt_A          162 KAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMY  206 (287)
T ss_dssp             HHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTTCT
T ss_pred             HHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCCCCC
Confidence            1   1                     2234578999999997653

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=99.77  E-value=5.1e-19  Score=153.71  Aligned_cols=158  Identities=23%  Similarity=0.297  Sum_probs=134.9

Q ss_pred             ECCCcccHHHH-HHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064           47 VGGRKDSQSYV-SMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK  124 (229)
Q Consensus        47 vg~~~~s~~Y~-~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K  124 (229)
                      +| +|.+++|- ....+.|+++|+++.|..++  +++++|.+.++.++.+  ++|++||.|+|.++  ...++.++| .|
T Consensus         7 ~G-~pi~hs~sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~~~--~~G~~vt~P~k~~i--~~~~~~l~~~a~   79 (263)
T 2d5c_A            7 LG-HPVAHSLSPAMHAFALESLGLEGSYEAWD--TPLEALPGRLKEVRRA--FRGVNLTLPLKEAA--LAHLDWVSPEAQ   79 (263)
T ss_dssp             EE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEE--CCGGGHHHHHHHHHHH--CSEEEECTTCTTGG--GGGCSEECHHHH
T ss_pred             EC-CCcccccCHHHHHHHHHHcCCCCEEEEEe--CCHHHHHHHHHhcccc--CceEEEcccCHHHH--HHHHHHHhHHHH
Confidence            45 68888888 88999999999999999885  7788999999999987  99999999999877  445667788 89


Q ss_pred             cccccCcc--chhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          125 DVDGFHPL--NIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       125 DVDg~~~~--N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      +++|++..  +.|++...       +++..|++..|++++++++| +++|||.|.+ |++++..|.+.|++|++|+++..
T Consensus        80 ~~gavn~i~~~~g~~~g~-------ntd~~g~~~~l~~~~~~l~~-~v~iiG~G~~-g~~~a~~l~~~g~~v~v~~r~~~  150 (263)
T 2d5c_A           80 RIGAVNTVLQVEGRLFGF-------NTDAPGFLEALKAGGIPLKG-PALVLGAGGA-GRAVAFALREAGLEVWVWNRTPQ  150 (263)
T ss_dssp             HHTCCCEEEEETTEEEEE-------CCHHHHHHHHHHHTTCCCCS-CEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHH
T ss_pred             HhCCCCcEEccCCeEEEe-------CCCHHHHHHHHHHhCCCCCC-eEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHH
Confidence            99999988  77766422       44568999999999999999 9999999995 99999999999999999998632


Q ss_pred             --------------CHHhhhccCcEEEEecCCC
Q 027064          203 --------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       203 --------------~l~~~~~~aDivisA~g~p  221 (229)
                                    ++.+. +++|+||++|+.+
T Consensus       151 ~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~  182 (263)
T 2d5c_A          151 RALALAEEFGLRAVPLEKA-REARLLVNATRVG  182 (263)
T ss_dssp             HHHHHHHHHTCEECCGGGG-GGCSEEEECSSTT
T ss_pred             HHHHHHHHhccchhhHhhc-cCCCEEEEccCCC
Confidence                          23455 7899999999976

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=99.75  E-value=5.6e-19  Score=154.88  Aligned_cols=152  Identities=16%  Similarity=0.155  Sum_probs=123.6

Q ss_pred             HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCcc-CcccccCcc---ch
Q 027064           59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLE-KDVDGFHPL---NI  134 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~-KDVDg~~~~---N~  134 (229)
                      .-.++|+++|+++.|..|+  +++++|.+.++.++ +++++|++|++|+|.++  -.+++.++|. |++++++.+   +-
T Consensus        19 ~hn~~~~~~gl~~~y~~~~--~~~~~l~~~i~~~~-~~~~~G~nVT~P~K~~v--~~~ld~~~~~A~~igavNti~~~~~   93 (272)
T 1p77_A           19 IQNKLAAQTHQTMEYIAKL--GDLDAFEQQLLAFF-EEGAKGCNITSPFKERA--YQLADEYSQRAKLAEACNTLKKLDD   93 (272)
T ss_dssp             HHHHHHHHTTCCEEEEEEE--CCTTTHHHHHHHHH-HTTCCEEEECTTCHHHH--HHHCSEECHHHHHHTCCSEEEECTT
T ss_pred             HHHHHHHHCCcCeEEEEEE--cCHHHHHHHHHHHH-hCCCCEEEECcCCHHHH--HHHHhhcCHHHHHhCCceEEEEccC
Confidence            4578999999999999996  66789999999998 56899999999999655  4566778886 899999876   55


Q ss_pred             hhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---CHH------
Q 027064          135 GKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---DPE------  205 (229)
Q Consensus       135 g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---~l~------  205 (229)
                      |+++ |      .++++.|+++.|++++++++||+|+|+|+|++ |++++..|.+.|++|++++++..   .+.      
T Consensus        94 g~l~-g------~NTD~~G~~~~L~~~~~~~~~~~vlvlGaGg~-g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~  165 (272)
T 1p77_A           94 GKLY-A------DNTDGIGLVTDLQRLNWLRPNQHVLILGAGGA-TKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY  165 (272)
T ss_dssp             SCEE-E------ECCHHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CEEE-E------ecCCHHHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc
Confidence            5553 2      26789999999999999999999999999985 99999999999999999998642   111      


Q ss_pred             --------hhh-c-cCcEEEEecCCCCC
Q 027064          206 --------SIV-R-EADIVIAAAGQAMM  223 (229)
Q Consensus       206 --------~~~-~-~aDivisA~g~p~~  223 (229)
                              +.+ . ++|+||++||.+..
T Consensus       166 ~~~~~~~~~~~~~~~~DivIn~t~~~~~  193 (272)
T 1p77_A          166 GNIQAVSMDSIPLQTYDLVINATSAGLS  193 (272)
T ss_dssp             SCEEEEEGGGCCCSCCSEEEECCCC---
T ss_pred             CCeEEeeHHHhccCCCCEEEECCCCCCC
Confidence                    012 3 79999999997654

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=99.74  E-value=4.6e-18  Score=151.22  Aligned_cols=161  Identities=20%  Similarity=0.303  Sum_probs=134.0

Q ss_pred             CCCcccHHHHHHHH-HHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCcc-Cc
Q 027064           48 GGRKDSQSYVSMKR-KACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLE-KD  125 (229)
Q Consensus        48 g~~~~s~~Y~~~k~-k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~-KD  125 (229)
                      | +|.+++|...+. +.|+++|+++.|..|+  +++++|.+.++.++ +.++.|++|++|++.++  -..++.++|. |+
T Consensus        30 G-~pi~hS~Sp~~hn~~~~~~Gl~~~Y~~~~--~~~~~l~~~v~~l~-~~~~~G~nVTiP~K~~i--~~~ld~~~~~A~~  103 (297)
T 2egg_A           30 G-FPVEHSLSPLMHNDAFARLGIPARYHLFS--VEPGQVGAAIAGVR-ALGIAGVNVTIPHKLAV--IPFLDEVDEHARR  103 (297)
T ss_dssp             E-SSCTTCSHHHHHHHHHHHTTCCEEEEEEE--CCTTCHHHHHHHHH-HHTCCEEEECTTCTTTT--GGGCSEECHHHHH
T ss_pred             C-CCcccccCHHHHHHHHHHcCcCcEEEEEE--cCHHHHHHHHHHHh-hCCCCeEEECCcCHHHH--HHHHHHHhHHHHH
Confidence            5 688999988777 8999999999999996  66788888998888 44799999999999877  4567778885 89


Q ss_pred             ccccCcc--chhhhhccCCCCCcccCCHHHHHHHHHHhC-CCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC
Q 027064          126 VDGFHPL--NIGKLAMKGRDPLFLPCTPKGCLELLKRSG-VTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT  201 (229)
Q Consensus       126 VDg~~~~--N~g~l~~~~~~~~~~PcTa~av~~lL~~~~-~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t  201 (229)
                      +.+++.+  +.|+++-       .+++..|+++.|++++ +++.||+|+|+|+|++ |++++..|.+.|+ +|++++++.
T Consensus       104 iGavNti~~~~g~l~g-------~nTd~~G~~~~l~~~~~~~l~~~~vlVlGaGg~-g~aia~~L~~~G~~~V~v~nR~~  175 (297)
T 2egg_A          104 IGAVNTIINNDGRLVG-------YNTDGLGYVQALEEEMNITLDGKRILVIGAGGG-ARGIYFSLLSTAAERIDMANRTV  175 (297)
T ss_dssp             HTCCCEEEEETTEEEE-------ECCHHHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHTTTCSEEEEECSSH
T ss_pred             hCCCCeEECcCCeEee-------ccCCHHHHHHHHHHhCCCCCCCCEEEEECcHHH-HHHHHHHHHHCCCCEEEEEeCCH
Confidence            9888876  5666542       2567799999999998 8899999999999995 9999999999998 999998853


Q ss_pred             C--------------------CHHhhhccCcEEEEecCCCC
Q 027064          202 T--------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       202 ~--------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      .                    ++.+.+.++|+||++|+.+.
T Consensus       176 ~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          176 EKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM  216 (297)
T ss_dssp             HHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred             HHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence            1                    22345678999999999765

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=99.63  E-value=3.6e-16  Score=138.66  Aligned_cols=158  Identities=22%  Similarity=0.237  Sum_probs=120.3

Q ss_pred             CcccHHHHHHHH-HHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCcc-Cccc
Q 027064           50 RKDSQSYVSMKR-KACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLE-KDVD  127 (229)
Q Consensus        50 ~~~s~~Y~~~k~-k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~-KDVD  127 (229)
                      +|-++++--... ++|+++|+++.|..|+  +++++|.+.++.++. +++.|++|++|++..+  -.+++.++|. +.+.
T Consensus        13 ~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~v~~l~~-~~~~G~nVTiP~K~~v--~~~ld~ls~~A~~iG   87 (282)
T 3fbt_A           13 EKLGHSHSSYIHKLIFEKVGIKGIYNLFE--VPKEKLKESVDTFKI-IKCGGLNVTIPYKVEV--MKELYEISEKARKIG   87 (282)
T ss_dssp             SSCCCCHHHHHHHHHHHHHTCCEEEEEEE--CCGGGHHHHHHHHHH-TTCCEEEECTTCTTGG--GGGCSEECHHHHHHT
T ss_pred             CCccccchHHHHHHHHHHcCCCcEEEEEE--CCHHHHHHHHHHHhc-CCCCEEEEcCCCHHHH--HHHHHhcCHHHHHcC
Confidence            577777776655 7899999999999986  667899999988875 5799999999999422  3344455553 5554


Q ss_pred             ccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCCCH--
Q 027064          128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTTDP--  204 (229)
Q Consensus       128 g~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~~l--  204 (229)
                      +   +|+-..-.|  .-.-.+++..|+++.|++++++++||+|+|+|+|++ |++++..|.+.|+ +|++++|+....  
T Consensus        88 A---VNTv~~~~g--~l~G~NTD~~G~~~~L~~~~~~~~~k~vlvlGaGGa-araia~~L~~~G~~~v~v~nRt~~ka~~  161 (282)
T 3fbt_A           88 A---VNTLKFSRE--GISGFNTDYIGFGKMLSKFRVEIKNNICVVLGSGGA-ARAVLQYLKDNFAKDIYVVTRNPEKTSE  161 (282)
T ss_dssp             C---CCEEEECSS--CEEEECCHHHHHHHHHHHTTCCCTTSEEEEECSSTT-HHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             C---cceEEeeCC--EEEeeCCcHHHHHHHHHHcCCCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            4   444222111  112348889999999999999999999999999996 9999999999999 899999753211  


Q ss_pred             -------------HhhhccCcEEEEecCC
Q 027064          205 -------------ESIVREADIVIAAAGQ  220 (229)
Q Consensus       205 -------------~~~~~~aDivisA~g~  220 (229)
                                   .+ + ++|+||+||+.
T Consensus       162 La~~~~~~~~~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          162 IYGEFKVISYDELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             HCTTSEEEEHHHHTT-C-CCSEEEECSST
T ss_pred             HHHhcCcccHHHHHh-c-cCCEEEECCcc
Confidence                         12 3 79999999964

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=99.60  E-value=1.4e-15  Score=136.78  Aligned_cols=162  Identities=18%  Similarity=0.204  Sum_probs=122.4

Q ss_pred             CCCcccHHHHHHHHH-HHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcc
Q 027064           48 GGRKDSQSYVSMKRK-ACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDV  126 (229)
Q Consensus        48 g~~~~s~~Y~~~k~k-~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDV  126 (229)
                      | +|-++++--...+ +|+++|+++.|..|+  +++++|.+.++.+.. .++.|++|++|++..+  -.+++.++|  ..
T Consensus        44 G-~Pi~hS~SP~ihn~~f~~~Gl~~~Y~~~~--v~~~~l~~~~~~l~~-~~~~G~nVTiP~K~~v--~~~lD~ls~--~A  115 (315)
T 3tnl_A           44 A-TPIRHSLSPTMHNEAFAKLGLDYVYLAFE--VGDKELKDVVQGFRA-MNLRGWNVSMPNKTNI--HKYLDKLSP--AA  115 (315)
T ss_dssp             E-SSCTTCSHHHHHHHHHHHHTCCEEEEEEE--CCHHHHHHHHHHHHH-TTCCEEEECTTSTTTG--GGGCSEECH--HH
T ss_pred             C-CCccccccHHHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHhc-CCCCEEEEcCCChHHH--HHHHHhcCH--HH
Confidence            5 5777777666655 889999999999986  778899999988875 4799999999999432  233444444  33


Q ss_pred             cccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC---
Q 027064          127 DGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT---  202 (229)
Q Consensus       127 Dg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~---  202 (229)
                      .-+.++|+-..-.|  .-.-.+++..|+++.|++++++++||+|+|+|+|++ |++++..|.+.|+ +|++++|+..   
T Consensus       116 ~~iGAVNTi~~~~g--~l~G~NTD~~Gf~~~L~~~~~~l~gk~~lVlGaGG~-g~aia~~L~~~Ga~~V~i~nR~~~~~~  192 (315)
T 3tnl_A          116 ELVGAVNTVVNDDG--VLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGA-ATAICIQAALDGVKEISIFNRKDDFYA  192 (315)
T ss_dssp             HHHTCCSEEEEETT--EEEEECCHHHHHHHHHHHTTCCCTTSEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECSSTTHH
T ss_pred             HHhCccceEEecCC--EEEEeCCCHHHHHHHHHHcCCCccCCEEEEECCChH-HHHHHHHHHHCCCCEEEEEECCCchHH
Confidence            33456665332111  111248999999999999999999999999999986 9999999999999 8999988721   


Q ss_pred             --------------------------CHHhhhccCcEEEEecCC
Q 027064          203 --------------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       203 --------------------------~l~~~~~~aDivisA~g~  220 (229)
                                                ++.+.+.++|+||+||+.
T Consensus       193 ~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~  236 (315)
T 3tnl_A          193 NAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGV  236 (315)
T ss_dssp             HHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECSST
T ss_pred             HHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECccC
Confidence                                      022345689999999973

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=99.50  E-value=8.3e-15  Score=129.52  Aligned_cols=151  Identities=14%  Similarity=0.150  Sum_probs=115.4

Q ss_pred             HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhhh
Q 027064           59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGKL  137 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~l  137 (229)
                      .-...++++|++..|..|+  ++.++|.+.++.+... ++.|++|++|++.     .++..+|. .....-+.++|+-..
T Consensus        18 ~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVTiP~K~-----~v~~~~d~l~~~A~~iGAVNTv~~   89 (277)
T 3don_A           18 MHHANFQSLNLENTYEAIN--VPVNQFQDIKKIISEK-SIDGFNVTIPHKE-----RIIPYLDDINEQAKSVGAVNTVLV   89 (277)
T ss_dssp             HHHHHHHHTTCCCEEEEEE--CCGGGGGGHHHHHHHT-TCSEEEECTTCTT-----TTGGGCSEECHHHHHHTCCCEEEE
T ss_pred             HHHHHHHHcCcCcEEEEEE--cCHHHHHHHHHHHhhC-CCCEEEECcCCHH-----HHHHHhhhCCHHHHHhCceeEEEe
Confidence            3467889999999998887  5556666666666533 6999999999984     45555554 445566788887432


Q ss_pred             hccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------
Q 027064          138 AMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------  202 (229)
Q Consensus       138 ~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------  202 (229)
                      -.|  .-.-.+++..|+++.|++.+++++||+|+|+|+|++ |++++..|.+.|+ +|++++++..              
T Consensus        90 ~~g--~l~G~NTD~~G~~~~L~~~~~~l~~k~vlvlGaGg~-g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~  166 (277)
T 3don_A           90 KDG--KWIGYNTDGIGYVNGLKQIYEGIEDAYILILGAGGA-SKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINL  166 (277)
T ss_dssp             ETT--EEEEECCHHHHHHHHHHHHSTTGGGCCEEEECCSHH-HHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECH
T ss_pred             cCC--EEEEECChHHHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccH
Confidence            211  222348999999999999999999999999999996 9999999999999 8999988632              


Q ss_pred             -CHHhhhccCcEEEEecCC
Q 027064          203 -DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       203 -~l~~~~~~aDivisA~g~  220 (229)
                       ++.+.+.++|+||++|+.
T Consensus       167 ~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          167 SHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             HHHHHTGGGCSEEEECCC-
T ss_pred             hhHHHHhcCCCEEEECccC
Confidence             233557899999999975

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=99.48  E-value=3.2e-14  Score=125.90  Aligned_cols=153  Identities=14%  Similarity=0.117  Sum_probs=117.4

Q ss_pred             HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhhh
Q 027064           59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGKL  137 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~l  137 (229)
                      .-...++++|++..|..|+  ++.++|.+.++.+.. .++.|++|+.|++     +.++..+|- .....-+.++|+-..
T Consensus        26 ~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVTiP~K-----~~v~~~ld~l~~~A~~iGAVNTv~~   97 (281)
T 3o8q_A           26 IHTLFARQTQQSMIYTAQC--VPVDGFTEAAKHFFA-QGGRGCNVTVPFK-----EEAYRFADRLTERARLAGAVNTLKK   97 (281)
T ss_dssp             HHHHHHHHTTCCEEEEEEC--CCTTCHHHHHHHHHH-TTCCEEEECTTSH-----HHHHHHCSEECHHHHHHTCCSEEEE
T ss_pred             HHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHHh-CCCCEEEECCccH-----HHHHHHHhhcCHHHHhhCeeeEEEE
Confidence            4467789999999999887  445677777776653 4689999999998     577777764 555666788887432


Q ss_pred             hccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCCC---HH--------
Q 027064          138 AMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTTD---PE--------  205 (229)
Q Consensus       138 ~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~~---l~--------  205 (229)
                      ..++ .-.-.+++..|+++-|++.+++++||+++|+|+|++ |++++..|.+.|+ +|++++++...   +.        
T Consensus        98 ~~~g-~l~G~NTD~~G~~~~L~~~~~~l~~k~vlvlGaGg~-g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~  175 (281)
T 3o8q_A           98 LDDG-EILGDNTDGEGLVQDLLAQQVLLKGATILLIGAGGA-ARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGE  175 (281)
T ss_dssp             CTTS-CEEEECCHHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSC
T ss_pred             cCCC-cEEEEecHHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCC
Confidence            1121 222358999999999999999999999999999985 9999999999997 99999885321   11        


Q ss_pred             -------hhhccCcEEEEecCCC
Q 027064          206 -------SIVREADIVIAAAGQA  221 (229)
Q Consensus       206 -------~~~~~aDivisA~g~p  221 (229)
                             +....+|+||++|+..
T Consensus       176 ~~~~~~~~l~~~aDiIInaTp~g  198 (281)
T 3o8q_A          176 VKAQAFEQLKQSYDVIINSTSAS  198 (281)
T ss_dssp             EEEEEGGGCCSCEEEEEECSCCC
T ss_pred             eeEeeHHHhcCCCCEEEEcCcCC
Confidence                   1125789999999865

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=99.46  E-value=8.5e-14  Score=125.01  Aligned_cols=151  Identities=15%  Similarity=0.179  Sum_probs=117.9

Q ss_pred             HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhhh
Q 027064           59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGKL  137 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~l  137 (229)
                      .-..+++++|+++.|..|+  ++.++|.+.++.+.. .++.|++|++|++     +.++..+|- .....-+.++|+-..
T Consensus        49 ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVTiP~K-----~~v~~~lD~ls~~A~~iGAVNTi~~  120 (312)
T 3t4e_A           49 MQNKALEKAGLPYTYMAFE--VDNTTFASAIEGLKA-LKMRGTGVSMPNK-----QLACEYVDELTPAAKLVGAINTIVN  120 (312)
T ss_dssp             HHHHHHHHHTCSEEEEEEE--CCTTTHHHHHHHHHH-TTCCEEEECTTSH-----HHHGGGCSEECHHHHHHTCCSEEEE
T ss_pred             HHHHHHHHcCCCcEEEeEe--cCHHHHHHHHHHHhh-CCCCEEEECchhH-----HHHHHHhhhcCHHHHHhCceeEEEe
Confidence            4567889999999999887  445566666666654 3599999999998     678887775 556667788887542


Q ss_pred             hccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------
Q 027064          138 AMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------  202 (229)
Q Consensus       138 ~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------  202 (229)
                      -.|  .-.-.+++..|+++-|++.+++++||+|+|+|+|++ |+.++..|...|+ .|++++|+..              
T Consensus       121 ~~g--~l~G~NTD~~Gf~~~L~~~~~~l~gk~~lVlGAGGa-araia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~  197 (312)
T 3t4e_A          121 DDG--YLRGYNTDGTGHIRAIKESGFDMRGKTMVLLGAGGA-ATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNE  197 (312)
T ss_dssp             ETT--EEEEECHHHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHH
T ss_pred             cCC--EEEEeCCcHHHHHHHHHhcCCCcCCCEEEEECcCHH-HHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhh
Confidence            111  222358999999999999999999999999999996 9999999999999 8999998721              


Q ss_pred             ------------CH---HhhhccCcEEEEecCC
Q 027064          203 ------------DP---ESIVREADIVIAAAGQ  220 (229)
Q Consensus       203 ------------~l---~~~~~~aDivisA~g~  220 (229)
                                  ++   .+.+.++|+||+||+.
T Consensus       198 ~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~  230 (312)
T 3t4e_A          198 NTDCVVTVTDLADQHAFTEALASADILTNGTKV  230 (312)
T ss_dssp             HSSCEEEEEETTCHHHHHHHHHHCSEEEECSST
T ss_pred             ccCcceEEechHhhhhhHhhccCceEEEECCcC
Confidence                        11   3346789999999985

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=99.46  E-value=4.9e-14  Score=124.19  Aligned_cols=151  Identities=14%  Similarity=0.126  Sum_probs=115.1

Q ss_pred             HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhhh
Q 027064           59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGKL  137 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~l  137 (229)
                      .-...++++|++..|..++  ++.++|.+.++.+.. +++.|++|+.|++     +.++..+|- .....-+.++|+-..
T Consensus        20 ~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVTiP~K-----~~v~~~~d~l~~~A~~iGAvNTv~~   91 (272)
T 3pwz_A           20 IHGLFAQASNQQLEYGAIE--GSLDDFEAQVLQFRS-EGGKGMNITAPFK-----LRAFELADRRSERAQLARAANALKF   91 (272)
T ss_dssp             HHHHHHHHTTCCEEEEEEE--CCTTTHHHHHHHHHH-TTCCEEEECTTCH-----HHHHHHCSEECHHHHHHTCCSEEEE
T ss_pred             HHHHHHHHcCCCcEEEEEE--cCHHHHHHHHHHHhh-CCCCEEEECchhH-----HHHHHHHhhCCHHHHHhCccceEEc
Confidence            4456789999999999886  445677777776653 4689999999998     577777664 455666788887522


Q ss_pred             hccCCCCCcccCCHHHHHHH-HHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCCC---H--------
Q 027064          138 AMKGRDPLFLPCTPKGCLEL-LKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTTD---P--------  204 (229)
Q Consensus       138 ~~~~~~~~~~PcTa~av~~l-L~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~~---l--------  204 (229)
                       .++ .-.-.+++..|+++- |+..+++++||+++|+|+|++ |++++..|.+.|+ +|++++++...   +        
T Consensus        92 -~~g-~l~G~NTD~~G~~~~lL~~~~~~l~~k~~lvlGaGg~-~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~  168 (272)
T 3pwz_A           92 -EDG-RIVAENFDGIGLLRDIEENLGEPLRNRRVLLLGAGGA-VRGALLPFLQAGPSELVIANRDMAKALALRNELDHSR  168 (272)
T ss_dssp             -ETT-EEEEECCHHHHHHHHHHTTSCCCCTTSEEEEECCSHH-HHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTT
T ss_pred             -cCC-eEEEecCCHHHHHHHHHHHcCCCccCCEEEEECccHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCC
Confidence             221 222358999999995 999999999999999999996 9999999999997 99999885321   1        


Q ss_pred             ------Hhhh-ccCcEEEEecCC
Q 027064          205 ------ESIV-READIVIAAAGQ  220 (229)
Q Consensus       205 ------~~~~-~~aDivisA~g~  220 (229)
                            .+.- .++|+||+||+.
T Consensus       169 ~~~~~~~~l~~~~~DivInaTp~  191 (272)
T 3pwz_A          169 LRISRYEALEGQSFDIVVNATSA  191 (272)
T ss_dssp             EEEECSGGGTTCCCSEEEECSSG
T ss_pred             eeEeeHHHhcccCCCEEEECCCC
Confidence                  1111 679999999985

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=99.44  E-value=1.1e-13  Score=122.44  Aligned_cols=154  Identities=16%  Similarity=0.155  Sum_probs=114.6

Q ss_pred             HHHHHHHHcCCeeeeecCCC---CCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccch
Q 027064           59 MKRKACAEVGIKSFDIDLPE---QVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNI  134 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~---~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~  134 (229)
                      .-...++++|++..|..|+-   .++.++|.+.++.+.. .++.|++|+.|++.     .++..+|- .....-+.++|+
T Consensus        22 ~hn~~f~~~gl~~~Y~~~~~~~~~v~~~~l~~~~~~~~~-~~~~G~nVTiP~K~-----~v~~~lD~l~~~A~~iGAVNT   95 (283)
T 3jyo_A           22 MHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALY-LGFNGLNITHPYKQ-----AVLPLLDEVSEQATQLGAVNT   95 (283)
T ss_dssp             HHHHHHHHTTCCEEEEEEETTSTTTTTCCHHHHHHHHHH-TTCCEEEECTTCTT-----TTGGGSSEECHHHHHHTCCCE
T ss_pred             HHHHHHHHcCCCeEEEEEEccccCCCHHHHHHHHHHHhh-CCCCEEEECcccHH-----HHHHHhhhCCHHHHHhCcceE
Confidence            34567899999999998842   2445566666665543 46999999999994     44555553 445556778887


Q ss_pred             hhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-----------
Q 027064          135 GKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-----------  202 (229)
Q Consensus       135 g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-----------  202 (229)
                      -..-.++ .-.-.+++..|+++-|++.+.+++||+|+|+|+|++ |+.++..|...|+ +|++++++..           
T Consensus        96 v~~~~~g-~l~G~NTD~~G~~~~l~~~~~~l~~k~vlVlGaGG~-g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~  173 (283)
T 3jyo_A           96 VVIDATG-HTTGHNTDVSGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_dssp             EEECTTS-CEEEECHHHHHHHHHHHHHCTTCCCSEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEECCCC-eEEEecCCHHHHHHHHHHhCcCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh
Confidence            4322011 222358999999999999998999999999999996 9999999999999 7999987521           


Q ss_pred             -------------CHHhhhccCcEEEEecCC
Q 027064          203 -------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       203 -------------~l~~~~~~aDivisA~g~  220 (229)
                                   ++.+.+.++|+||+||+.
T Consensus       174 ~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~  204 (283)
T 3jyo_A          174 AVGREAVVGVDARGIEDVIAAADGVVNATPM  204 (283)
T ss_dssp             HHTSCCEEEECSTTHHHHHHHSSEEEECSST
T ss_pred             hcCCceEEEcCHHHHHHHHhcCCEEEECCCC
Confidence                         334556789999999974

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=99.34  E-value=6.7e-13  Score=115.70  Aligned_cols=143  Identities=14%  Similarity=0.175  Sum_probs=113.2

Q ss_pred             HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhh
Q 027064           59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLA  138 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~  138 (229)
                      .-...++++|++..|..++  ++.++|.+.++.+.  +++.|++|++|++     +.++..+|......-+.++|+-.. 
T Consensus        18 ~hn~~~~~~gl~~~Y~~~~--v~~~~l~~~~~~~~--~~~~G~nVT~P~K-----~~v~~~~d~~~~A~~iGAvNTi~~-   87 (253)
T 3u62_A           18 LYNEYFKRAGMNHSYGMEE--IPPESFDTEIRRIL--EEYDGFNATIPHK-----ERVMRYVEPSEDAQRIKAVNCVFR-   87 (253)
T ss_dssp             HHHHHHHHHTCCCEEEEEE--CCGGGHHHHHHHHH--HHCSEEEECTTCT-----TGGGGGSEECHHHHHHTCCCEEET-
T ss_pred             HHHHHHHHcCCCCEEEeEe--cCHHHHHHHHHHHh--hCCCceeecCChH-----HHHHHHhCCCHHHHHcCcceEeec-
Confidence            3457789999999999887  56678888888876  5799999999999     466666665344556788887422 


Q ss_pred             ccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC---------------
Q 027064          139 MKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT---------------  202 (229)
Q Consensus       139 ~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~---------------  202 (229)
                          + .-.+++..|+++.|++.  +++| +++|+|+|++ |++++..|.+.|+ .|++++++..               
T Consensus        88 ----~-~G~NTD~~G~~~~l~~~--~~~~-~vliiGaGg~-a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~  158 (253)
T 3u62_A           88 ----G-KGYNTDWVGVVKSLEGV--EVKE-PVVVVGAGGA-ARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLD  158 (253)
T ss_dssp             ----T-EEECCHHHHHHHHTTTC--CCCS-SEEEECCSHH-HHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGG
T ss_pred             ----C-EEEcchHHHHHHHHHhc--CCCC-eEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHH
Confidence                1 23489999999999876  5689 9999999996 9999999999999 8999988521               


Q ss_pred             CHHhhhccCcEEEEecCC
Q 027064          203 DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       203 ~l~~~~~~aDivisA~g~  220 (229)
                      ++.+.++++|+||+||+.
T Consensus       159 ~~~~~~~~aDiVInatp~  176 (253)
T 3u62_A          159 QLDEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             GHHHHHHTCSEEEECSST
T ss_pred             HHHhhhcCCCEEEECCCC
Confidence            234567889999999963

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=99.31  E-value=1.9e-12  Score=114.02  Aligned_cols=145  Identities=14%  Similarity=0.092  Sum_probs=106.8

Q ss_pred             HHHHH----HHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccch
Q 027064           60 KRKAC----AEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNI  134 (229)
Q Consensus        60 k~k~a----~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~  134 (229)
                      -...+    +++|++..|..++-    ++|.+.++.+.. .++.|++|+.|++     +.++..+|- .....-+.++|+
T Consensus        22 hn~~f~~~~~~~gl~~~Y~~~~v----~~l~~~~~~~~~-~~~~G~nVTiP~K-----~~v~~~~d~l~~~A~~iGAVNT   91 (269)
T 3phh_A           22 HNACFLTFQKELRFLGHYHPILL----PLESHIKSEFLH-LGLSGANVTLPFK-----ERAFQVCDKIKGIALECGAVNT   91 (269)
T ss_dssp             HHHHHHHHHHHHSSEEEEEEEEC----CSSSCHHHHHHH-TTEEEEEECTTCH-----HHHHHHSSEECGGGGGTTCCCE
T ss_pred             HHHHHHHHHHHcCCCCEEeeEEh----hhHHHHHHHHhh-CCCCEEEEccccH-----HHHHHHHhhcCHHHHHhCceeE
Confidence            34566    89999999988873    333334444433 4699999999998     677777776 556677889998


Q ss_pred             hhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhh-------
Q 027064          135 GKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESI-------  207 (229)
Q Consensus       135 g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~-------  207 (229)
                      -..-.|  .-.-.+++..|+++-|++.+    ||+|+|+|+|++ |++++..|.+.|+.|++++|+....++.       
T Consensus        92 i~~~~g--~l~G~NTD~~Gf~~~L~~~~----~k~vlvlGaGGa-araia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~  164 (269)
T 3phh_A           92 LVLEND--ELVGYNTDALGFYLSLKQKN----YQNALILGAGGS-AKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDC  164 (269)
T ss_dssp             EEEETT--EEEEECCHHHHHHHHCC-------CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEE
T ss_pred             EEeeCC--EEEEecChHHHHHHHHHHcC----CCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeE
Confidence            543211  22235999999999998754    999999999996 9999999999999999998875443322       


Q ss_pred             -----hccCcEEEEecCCC
Q 027064          208 -----VREADIVIAAAGQA  221 (229)
Q Consensus       208 -----~~~aDivisA~g~p  221 (229)
                           +..+|+||+||+..
T Consensus       165 ~~~~~l~~~DiVInaTp~G  183 (269)
T 3phh_A          165 FMEPPKSAFDLIINATSAS  183 (269)
T ss_dssp             ESSCCSSCCSEEEECCTTC
T ss_pred             ecHHHhccCCEEEEcccCC
Confidence                 23799999999854

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=99.21  E-value=3.4e-11  Score=105.84  Aligned_cols=161  Identities=12%  Similarity=0.147  Sum_probs=116.2

Q ss_pred             EECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064           46 IVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK  124 (229)
Q Consensus        46 ~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K  124 (229)
                      .+|+. .|.+=. .-...++++|+++.|..++ .-+-+++++.++.+    ++.|++|+.|++.     .++..++- ..
T Consensus        12 viG~P-hS~SP~-~hn~~~~~~gl~~~Y~~~~-~~~l~~~~~~~~~~----~~~G~nVTiP~K~-----~i~~~~d~~~~   79 (271)
T 1npy_A           12 LSGRP-SNFGTT-FHNYLYDKLGLNFIYKAFT-TQDIEHAIKGVRAL----GIRGCAVSMPFKE-----TCMPFLDEIHP   79 (271)
T ss_dssp             ECSSC-CSHHHH-HHHHHHHHHTCCEEEEEEC-CSCHHHHHHHHHHH----TCCEEEECTTCTT-----TTGGGCSEECH
T ss_pred             EECCC-CcccHH-HHHHHHHHcCCCcEEEeec-hhhHHHHHHHhccC----CCCeEEECcCCHH-----HHHHHHHHhhH
Confidence            45765 665544 4578999999999999888 33445566666554    4889999999995     44555553 44


Q ss_pred             cccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCCC
Q 027064          125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTTD  203 (229)
Q Consensus       125 DVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~~  203 (229)
                      ...-+..+|+-..-.|  .-.-.+++..|.+.-|++.+.+ .+++|+|+|+|++ |++++..|...|+ .|++++|+...
T Consensus        80 ~A~~iGAvNTi~~~~g--~l~g~NTD~~G~~~~l~~~~~~-~~~~vlvlGaGga-arav~~~L~~~G~~~i~v~nRt~~k  155 (271)
T 1npy_A           80 SAQAIESVNTIVNDNG--FLRAYNTDYIAIVKLIEKYHLN-KNAKVIVHGSGGM-AKAVVAAFKNSGFEKLKIYARNVKT  155 (271)
T ss_dssp             HHHTTTCCCEEEEETT--EEEEECHHHHHHHHHHHHTTCC-TTSCEEEECSSTT-HHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred             HHHHhCCCCceECcCC--EEEeecCCHHHHHHHHHHhCCC-CCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCHHH
Confidence            5556777887432111  1122488899999999988765 7899999999996 9999999999998 79999986321


Q ss_pred             ---HHh----------hhccCcEEEEecCCCC
Q 027064          204 ---PES----------IVREADIVIAAAGQAM  222 (229)
Q Consensus       204 ---l~~----------~~~~aDivisA~g~p~  222 (229)
                         +.+          ...++|+||++|+.+.
T Consensus       156 a~~la~~~~~~~~~~~~~~~~DivInaTp~gm  187 (271)
T 1npy_A          156 GQYLAALYGYAYINSLENQQADILVNVTSIGM  187 (271)
T ss_dssp             HHHHHHHHTCEEESCCTTCCCSEEEECSSTTC
T ss_pred             HHHHHHHcCCccchhhhcccCCEEEECCCCCc
Confidence               110          1357899999999654

>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*

Probab=99.15  E-value=2.3e-11  Score=113.87  Aligned_cols=170  Identities=22%  Similarity=0.264  Sum_probs=122.6

Q ss_pred             CCCeEEEEEECCC------cccHH---HHHHHHHHHHHc-CCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEE---e
Q 027064           38 KVPGLAVVIVGGR------KDSQS---YVSMKRKACAEV-GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILV---Q  104 (229)
Q Consensus        38 ~~P~LaiI~vg~~------~~s~~---Y~~~k~k~a~~~-Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlv---q  104 (229)
                      ....+++|.-|..      -+.++   -..+|.-.++.+ ||++.++.|+. .+.++|.+.++.+.  +++.|++|   +
T Consensus        62 ~~~~v~vvtdgt~ilGlG~iG~hS~sPvmh~ka~lf~~~gGid~~yi~ldv-~d~de~~~~v~~l~--~~f~GinvED~T  138 (439)
T 2dvm_A           62 KGNLVAVVSDGSRILGLGNIGPLAGLPVMEGKALLFKRFGGVDAFPIMIKE-QEPNKFIDIVKAIA--PTFGGINLEDIA  138 (439)
T ss_dssp             GGGEEEEEECSTTBTTTBCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECSC-CSHHHHHHHHHHTG--GGCSEEEECSCC
T ss_pred             cCcEEEEEECCCeEecccceeccccCHHHHHHHHHHHHhCCCCCeeeeeec-CCHHHHHHHHHHhC--ccCcEEEEEeCC
Confidence            4457777764432      22221   223455569999 89999999983 16799999999987  68999999   9


Q ss_pred             CCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHH
Q 027064          105 LPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVS  184 (229)
Q Consensus       105 ~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla  184 (229)
                      .|+.     .++++.++.        .+|+-. +.++ ..+.-+++..|++.-|+..+.++++++|+|+|+|++ |+.++
T Consensus       139 ~P~k-----~~il~~l~~--------avNt~v-f~dD-~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgA-g~aia  202 (439)
T 2dvm_A          139 SPKC-----FYILERLRE--------ELDIPV-FHDD-QQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAA-GFATL  202 (439)
T ss_dssp             TTHH-----HHHHHHHHH--------HCSSCE-EEHH-HHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHH-HHHHH
T ss_pred             CchH-----HHHHHHHHH--------hcCEEE-EeCC-CcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHH-HHHHH
Confidence            9987     456665543        223211 1110 111226667899999999999999999999999997 99999


Q ss_pred             HHHhhCCC---EEEEEc----CC----C-CC-----------------------HHhhhccCcEEEEecCCC-CCCCC
Q 027064          185 LLLLKADA---TVTIVH----SH----T-TD-----------------------PESIVREADIVIAAAGQA-MMVTM  226 (229)
Q Consensus       185 ~~L~~~~a---tVtv~~----~~----t-~~-----------------------l~~~~~~aDivisA~g~p-~~i~~  226 (229)
                      .+|...|+   .|++|+    |+    . .+                       +.+.++.+|++|++|+.| +.+++
T Consensus       203 ~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~aDVlInaT~~~~G~~~~  280 (439)
T 2dvm_A          203 RILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIKP  280 (439)
T ss_dssp             HHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTCSEEEECSCCCSSSSCH
T ss_pred             HHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhccCCEEEEcCCCccCCCCh
Confidence            99999998   799999    64    1 12                       335567899999999985 77654

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.73  E-value=6.3e-09  Score=98.80  Aligned_cols=150  Identities=15%  Similarity=0.160  Sum_probs=99.4

Q ss_pred             HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhhh
Q 027064           59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGKL  137 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~l  137 (229)
                      .-..+++++|++..|..++-+    ++.+.++.+. +.++.|++|++|++     +.++..++- .....-+..+|+-..
T Consensus       252 ~hn~~f~~~gl~~~Y~~~~~~----~l~~~~~~~~-~~~~~G~nVTiP~K-----~~i~~~ld~~~~~A~~iGAvNti~~  321 (523)
T 2o7s_A          252 VHNQAFKSVDFNGVYVHLLVD----NLVSFLQAYS-SSDFAGFSCTIPHK-----EAALQCCDEVDPLAKSIGAVNTILR  321 (523)
T ss_dssp             HHHHHHHHTTCSEEEEEEECS----CHHHHHHHTC-STTEEEEEECTTCH-----HHHHHHCSEECHHHHHHTCCSEEEE
T ss_pred             HHHHHHHHcCCCcEEEeEEcc----hHHHHHHHHh-cCCCCEEEECCCCH-----HHHHHHhcccCHHHHHhCCCeEEEE
Confidence            456789999999999988742    5666666654 34699999999998     566666654 333344566665311


Q ss_pred             hc-cCCCCCcccCCHHHHHHHHHHhC-------------CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC
Q 027064          138 AM-KGRDPLFLPCTPKGCLELLKRSG-------------VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD  203 (229)
Q Consensus       138 ~~-~~~~~~~~PcTa~av~~lL~~~~-------------~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~  203 (229)
                      -. ++ .-.-.+++..|.+..|+...             .+++||+++|+|+|++ |+.++..|.+.|++|++++++...
T Consensus       322 ~~~~g-k~~g~nTD~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGi-g~aia~~L~~~G~~V~i~~R~~~~  399 (523)
T 2o7s_A          322 RKSDG-KLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGA-GKALAYGAKEKGAKVVIANRTYER  399 (523)
T ss_dssp             CTTTC-CEEEECCHHHHHHHHHHHHC-------------------CEEEECCSHH-HHHHHHHHHHHCC-CEEEESSHHH
T ss_pred             ecCCC-eEEEEcCCHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHH
Confidence            10 11 11224788889999888651             3578999999999985 999999999999999999875221


Q ss_pred             -----------------HHh-hhccCcEEEEecCC
Q 027064          204 -----------------PES-IVREADIVIAAAGQ  220 (229)
Q Consensus       204 -----------------l~~-~~~~aDivisA~g~  220 (229)
                                       +.+ .....|++|+++|.
T Consensus       400 a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~agv  434 (523)
T 2o7s_A          400 ALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSM  434 (523)
T ss_dssp             HHHHHHHTTC-CEETTTTTTC--CCSEEEEECSST
T ss_pred             HHHHHHHcCCceeeHHHhhhccccCceEEEECCCC
Confidence                             111 11237999999985

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=98.70  E-value=3e-08  Score=91.31  Aligned_cols=174  Identities=24%  Similarity=0.252  Sum_probs=119.0

Q ss_pred             CCeEEEEEECCCc---ccHHHH------HHHHHHHHH-cCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCC
Q 027064           39 VPGLAVVIVGGRK---DSQSYV------SMKRKACAE-VGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLP  108 (229)
Q Consensus        39 ~P~LaiI~vg~~~---~s~~Y~------~~k~k~a~~-~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp  108 (229)
                      ...++++.=|+.-   ++.-|.      ..|...++. .||++..+.++.. +.+|+++.++.+-  |.+.||.+.- + 
T Consensus        69 ~~~V~VvTdg~~vLGlGD~G~~ag~pI~egK~~Lf~~~agid~~pi~ldv~-~~dE~v~~vk~~~--p~f~~i~lED-~-  143 (388)
T 1vl6_A           69 WNTVAVVSDGSAVLGLGNIGPYGALPVMEGKAFLFKAFADIDAFPICLSES-EEEKIISIVKSLE--PSFGGINLED-I-  143 (388)
T ss_dssp             GGEEEEEECSTTBTTTBSCCHHHHHHHHHHHHHHHHHHHCCEEEEEECSCC-CHHHHHHHHHHTG--GGCSEEEECS-C-
T ss_pred             CCeEEEEECCccccCCCccccccCCcchhCHHHHHHhccCCceEeEEeCCC-CHHHHHHHHHHcC--CcceEeCHhh-c-
Confidence            3466666655432   223332      456666654 6999988988865 5899999999876  5566764421 1 


Q ss_pred             CCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHh
Q 027064          109 KHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL  188 (229)
Q Consensus       109 ~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~  188 (229)
                      +.-+--++.+...-+-|+.-||....|          -...+..|++.-++-.+.++++.+|+|+|+|.+ |..++.+|.
T Consensus       144 ~~p~af~il~r~r~~~~Ipvf~DDiqG----------TasV~lAal~~A~~i~g~~l~~~kVVv~GAGaA-G~~iAkll~  212 (388)
T 1vl6_A          144 GAPKCFRILQRLSEEMNIPVFHDDQQG----------TAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAA-GYNIVKFLL  212 (388)
T ss_dssp             CTTHHHHHHHHHHHHCSSCEEEHHHHH----------HHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHH-HHHHHHHHH
T ss_pred             CCHHHHHHHHHhhhhcCcceecccccc----------HHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHH-HHHHHHHHH
Confidence            111111222333223344444433333          223445677777777888999999999999996 999999999


Q ss_pred             hCCC-EEEEEcCC----C------------------------CCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          189 KADA-TVTIVHSH----T------------------------TDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       189 ~~~a-tVtv~~~~----t------------------------~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      ..|+ .|++|+++    .                        .+|.+.++.||++|.+++ |++|+.|||
T Consensus       213 ~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~Sa-p~l~t~emV  281 (388)
T 1vl6_A          213 DLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFIGVSR-GNILKPEWI  281 (388)
T ss_dssp             HHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEECSC-SSCSCHHHH
T ss_pred             hCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEEEeCC-CCccCHHHH
Confidence            9999 89999986    2                        247789999999999999 999998874

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.64  E-value=1.4e-08  Score=88.65  Aligned_cols=150  Identities=17%  Similarity=0.112  Sum_probs=109.5

Q ss_pred             HHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCC
Q 027064           63 ACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGR  142 (229)
Q Consensus        63 ~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~  142 (229)
                      .+.+.|++..|..++  ++.++|.+.++.+--.....|+.++.|+..+.+...+....+--+ .--+.++|+..+ .+  
T Consensus        21 ~~~~~g~~~~y~~~~--v~~~~~~~~~~~~~~~~~~~g~~~t~~~~~G~~~~~~~~~~~~~~-~~~~gavnt~~~-~~--   94 (287)
T 1lu9_A           21 VGYDGGADHITGYGN--VTPDNVGAYVDGTIYTRGGKEKQSTAIFVGGGDMAAGERVFEAVK-KRFFGPFRVSCM-LD--   94 (287)
T ss_dssp             HHHHTTCSEEEEESS--CCTTTHHHHHHHHHSSCCGGGGGGEEEEEECSCHHHHHHHHHHHH-HHCBTTBCCEEE-EC--
T ss_pred             eeeccCcceEeccCC--cCHHHHHhhhcceEEecCccccccceEEEccchHHHHHHHHHHHH-HhcCCCeEEEEe-cC--
Confidence            344799999888875  677889999998744456788888888766666655554443211 222466676522 22  


Q ss_pred             CCCcccCCHHHHHHHHHHh-CCCCCCCeEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCCC------------------
Q 027064          143 DPLFLPCTPKGCLELLKRS-GVTIKGKRAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHTT------------------  202 (229)
Q Consensus       143 ~~~~~PcTa~av~~lL~~~-~~~l~gk~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t~------------------  202 (229)
                       +.-.+++..|.++.|++. +.+++||+++|+| .|+ +|+.++..|.++|++|++++++..                  
T Consensus        95 -~~G~nTd~~g~~~~l~~~~~~~l~gk~vlVtGaaGG-iG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~  172 (287)
T 1lu9_A           95 -SNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGP-VGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVT  172 (287)
T ss_dssp             -STTHHHHHHHHHHHHHHHTTSCCTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCE
T ss_pred             -CCcCCchHHHHHHHHHHhhccCCCCCEEEEECCCcH-HHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEE
Confidence             233478999999999988 7889999999999 555 699999999999999999877421                  


Q ss_pred             --C------HHhhhccCcEEEEecCC
Q 027064          203 --D------PESIVREADIVIAAAGQ  220 (229)
Q Consensus       203 --~------l~~~~~~aDivisA~g~  220 (229)
                        |      +.+.+...|+||+++|.
T Consensus       173 ~~D~~~~~~~~~~~~~~DvlVn~ag~  198 (287)
T 1lu9_A          173 AAETADDASRAEAVKGAHFVFTAGAI  198 (287)
T ss_dssp             EEECCSHHHHHHHTTTCSEEEECCCT
T ss_pred             EecCCCHHHHHHHHHhCCEEEECCCc
Confidence              1      22445668999999974

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=98.55  E-value=1.2e-07  Score=88.60  Aligned_cols=83  Identities=23%  Similarity=0.309  Sum_probs=70.1

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCc
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREAD  212 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aD  212 (229)
                      +++|+...+-.+.+..+..+.||+|+|+|.|.+ |+++|..|...|++|+++++..             .++.+.+++||
T Consensus       190 ~~Gt~~slldgi~ratg~~L~GktVgIiG~G~I-G~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~AD  268 (436)
T 3h9u_A          190 LYGCRESLVDGIKRATDVMIAGKTACVCGYGDV-GKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAH  268 (436)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCS
T ss_pred             cccchHHHHHHHHHhcCCcccCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCC
Confidence            345666666666667889999999999999996 9999999999999999998732             26788999999


Q ss_pred             EEEEecCCCCCCCCCCC
Q 027064          213 IVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       213 ivisA~g~p~~i~~~~v  229 (229)
                      |||.++|.+++|+.+++
T Consensus       269 VVilt~gt~~iI~~e~l  285 (436)
T 3h9u_A          269 IFVTTTGNDDIITSEHF  285 (436)
T ss_dssp             EEEECSSCSCSBCTTTG
T ss_pred             EEEECCCCcCccCHHHH
Confidence            99999999999987653

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=98.44  E-value=2.1e-07  Score=87.30  Aligned_cols=79  Identities=25%  Similarity=0.348  Sum_probs=64.4

Q ss_pred             cCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-------------CCCHHhhhccCcEE
Q 027064          148 PCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-------------TTDPESIVREADIV  214 (229)
Q Consensus       148 PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-------------t~~l~~~~~~aDiv  214 (229)
                      .|.-..+-.+.+.++..+.||+|+|+|.|. +|+.+|..|...|++|+++++.             ..++.+.+++||||
T Consensus       228 G~~eslvdgI~Ratg~~L~GKTVgVIG~G~-IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIV  306 (464)
T 3n58_A          228 GCKESLVDGIRRGTDVMMAGKVAVVCGYGD-VGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIV  306 (464)
T ss_dssp             HHHHHHHHHHHHHHCCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEE
T ss_pred             cchHHHHHHHHHhcCCcccCCEEEEECcCH-HHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEE
Confidence            343334444455678999999999999999 5999999999999999999652             23678899999999


Q ss_pred             EEecCCCCCCCCC
Q 027064          215 IAAAGQAMMVTMG  227 (229)
Q Consensus       215 isA~g~p~~i~~~  227 (229)
                      +.++|.+++|+.+
T Consensus       307 v~atgt~~lI~~e  319 (464)
T 3n58_A          307 VTTTGNKDVITID  319 (464)
T ss_dssp             EECCSSSSSBCHH
T ss_pred             EECCCCccccCHH
Confidence            9999999998754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.39  E-value=3.2e-07  Score=71.81  Aligned_cols=76  Identities=17%  Similarity=0.357  Sum_probs=61.0

Q ss_pred             cCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-----------------CCHHhhhcc
Q 027064          148 PCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-----------------TDPESIVRE  210 (229)
Q Consensus       148 PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-----------------~~l~~~~~~  210 (229)
                      .+++...++.++...    |++|+|||.|.+ |+.++..|...|++|+++++..                 .++.+.+..
T Consensus         6 ~sv~~~a~~~~~~~~----~~~v~iiG~G~i-G~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~   80 (144)
T 3oj0_A            6 VSIPSIVYDIVRKNG----GNKILLVGNGML-ASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKN   80 (144)
T ss_dssp             CSHHHHHHHHHHHHC----CCEEEEECCSHH-HHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHT
T ss_pred             ccHHHHHHHHHHhcc----CCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcC
Confidence            356777888888774    899999999885 9999999999999999887642                 245567889


Q ss_pred             CcEEEEecCCCCC-CCCCC
Q 027064          211 ADIVIAAAGQAMM-VTMGI  228 (229)
Q Consensus       211 aDivisA~g~p~~-i~~~~  228 (229)
                      +|+||++||.++. ++.+|
T Consensus        81 ~Divi~at~~~~~~~~~~~   99 (144)
T 3oj0_A           81 NDVIITATSSKTPIVEERS   99 (144)
T ss_dssp             CSEEEECSCCSSCSBCGGG
T ss_pred             CCEEEEeCCCCCcEeeHHH
Confidence            9999999998876 34444

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.29  E-value=8.2e-07  Score=82.83  Aligned_cols=77  Identities=23%  Similarity=0.355  Sum_probs=63.1

Q ss_pred             CHHHHHHHH-HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-------------CCCHHhhhccCcEEE
Q 027064          150 TPKGCLELL-KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-------------TTDPESIVREADIVI  215 (229)
Q Consensus       150 Ta~av~~lL-~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-------------t~~l~~~~~~aDivi  215 (229)
                      |...++.-+ +..+..+.||+|+|+|.|.+ |+.++..|...|++|+++++.             ..++.+.++.||+||
T Consensus       202 t~~s~~~gi~rat~~~L~GktV~ViG~G~I-Gk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi  280 (435)
T 3gvp_A          202 CRESILDGLKRTTDMMFGGKQVVVCGYGEV-GKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVI  280 (435)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEE
T ss_pred             hHHHHHHHHHHhhCceecCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEE
Confidence            344444433 34678899999999999995 999999999999999999753             236778899999999


Q ss_pred             EecCCCCCCCCC
Q 027064          216 AAAGQAMMVTMG  227 (229)
Q Consensus       216 sA~g~p~~i~~~  227 (229)
                      .++|.+++|+.+
T Consensus       281 ~atgt~~lI~~e  292 (435)
T 3gvp_A          281 TCTGNKNVVTRE  292 (435)
T ss_dssp             ECSSCSCSBCHH
T ss_pred             ECCCCcccCCHH
Confidence            999999998744

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=98.23  E-value=1.1e-06  Score=81.06  Aligned_cols=171  Identities=23%  Similarity=0.257  Sum_probs=119.2

Q ss_pred             CCeEEEEEECCCc---ccHHHH------HHHHHHHHH-cCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCC
Q 027064           39 VPGLAVVIVGGRK---DSQSYV------SMKRKACAE-VGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLP  108 (229)
Q Consensus        39 ~P~LaiI~vg~~~---~s~~Y~------~~k~k~a~~-~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp  108 (229)
                      ...++++.=|+.-   ++.-|.      ..|...+.. .||++..+.++.. +.+||++.++.+-  |.+.||.+.    
T Consensus        65 ~~~V~VvTdG~~iLGLGD~G~~aG~pI~eGK~~Lf~~~agid~~pi~Ldv~-~~dEfv~~v~~~~--p~F~~I~lE----  137 (398)
T 2a9f_A           65 KNTVAVISDGTAVLGLGDIGPEAAMPVMEGKAALFKAFAGVDAIPIVLDTK-DTEEIISIVKALA--PTFGGINLE----  137 (398)
T ss_dssp             GTEEEEEECSSSCTTSCCCCHHHHHHHHHHHHHHHHHHSSCEEEEEECCCC-CHHHHHHHHHHHG--GGCSEEEEC----
T ss_pred             CCEEEEEECCccccCCCCcccccCCcchhCHHHHHHhccCCceeeeEeCCC-CHHHHHHHHHHcC--CceeEeccc----
Confidence            3466666654432   223332      456666654 7899999999865 5899999999986  667777664    


Q ss_pred             CCCCHHH---HHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHH
Q 027064          109 KHINEEK---VLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSL  185 (229)
Q Consensus       109 ~~i~~~~---i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~  185 (229)
                       .+...+   +++.....-|+.-||..-.|.          .-.+..|.+.-++-.+.+++.-+|||+|+|.. |..++.
T Consensus       138 -D~~~p~~f~il~~~r~~~~ipvf~DDiqGT----------a~V~lAall~al~l~g~~l~d~kVVi~GAGaA-G~~iA~  205 (398)
T 2a9f_A          138 -DISAPRCFEIEQRLIKECHIPVFHDDQHGT----------AIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSA-GLSITR  205 (398)
T ss_dssp             -SCCTTHHHHHHHHHHHHCSSCEEEHHHHHH----------HHHHHHHHHHHHHTTTCCTTSCEEEEECCSHH-HHHHHH
T ss_pred             -cCCChHHHHHHHHhhhcCCcceecchhhhH----------HHHHHHHHHHHHHHhCCCCCccEEEEECCCHH-HHHHHH
Confidence             222222   222222222344455433332          23445677777888888999999999999996 999999


Q ss_pred             HHhhCCC-EEEEEcCC--------C-------------------CCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064          186 LLLKADA-TVTIVHSH--------T-------------------TDPESIVREADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       186 ~L~~~~a-tVtv~~~~--------t-------------------~~l~~~~~~aDivisA~g~p~~i~~~~v  229 (229)
                      +|...|+ .|++|+++        +                   .+|.+.++.||++|-+.+ |+++|+|||
T Consensus       206 ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~Sa-pgl~T~EmV  276 (398)
T 2a9f_A          206 KLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVSA-PGVLKAEWI  276 (398)
T ss_dssp             HHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECCS-TTCCCHHHH
T ss_pred             HHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecCC-CCCCCHHHH
Confidence            9999999 99999885        1                   136688999999999988 999998874

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.98  E-value=6.1e-06  Score=78.20  Aligned_cols=67  Identities=28%  Similarity=0.333  Sum_probs=57.9

Q ss_pred             HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCCCCCCCC
Q 027064          160 RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQAMMVTM  226 (229)
Q Consensus       160 ~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~p~~i~~  226 (229)
                      ..+..+.||+|+|||.|.+ |+.+|..|...|++|+++++..             .++.+.+++||+||.+++.+++|+.
T Consensus       270 ~~g~~L~GktVgIIG~G~I-G~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~~t~~lI~~  348 (494)
T 3d64_A          270 ATDVMIAGKIAVVAGYGDV-GKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINH  348 (494)
T ss_dssp             HHCCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECSSSSCSBCH
T ss_pred             ccccccCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECCCcccccCH
Confidence            3567899999999999995 9999999999999999997642             2567889999999999998988864


Q ss_pred             C
Q 027064          227 G  227 (229)
Q Consensus       227 ~  227 (229)
                      +
T Consensus       349 ~  349 (494)
T 3d64_A          349 D  349 (494)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=97.95  E-value=0.00014  Score=65.94  Aligned_cols=58  Identities=16%  Similarity=0.202  Sum_probs=50.8

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~  220 (229)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.+++..              .++.+.+++||+|+.+++-
T Consensus       159 ~~~l~gktvGIIG~G~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Pl  230 (351)
T 3jtm_A          159 AYDLEGKTIGTVGAGRI-GKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPL  230 (351)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCC
T ss_pred             cccccCCEEeEEEeCHH-HHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCC
Confidence            45799999999999996 9999999999999999987642              2677889999999999873

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.94  E-value=1.6e-05  Score=75.13  Aligned_cols=70  Identities=31%  Similarity=0.462  Sum_probs=58.4

Q ss_pred             HHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCCCC
Q 027064          156 ELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       156 ~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      .+.+..+..+.||+|+|+|.|. +|+.+|..|...||+|+++++..             .++.+....+|+++.++|.++
T Consensus       254 gi~r~tg~~L~GKtVvVtGaGg-IG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~  332 (488)
T 3ond_A          254 GLMRATDVMIAGKVAVVAGYGD-VGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKD  332 (488)
T ss_dssp             HHHHHHCCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSC
T ss_pred             HHHHHcCCcccCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChh
Confidence            3445567889999999999996 59999999999999999997642             245677889999999999998


Q ss_pred             CCCC
Q 027064          223 MVTM  226 (229)
Q Consensus       223 ~i~~  226 (229)
                      ++..
T Consensus       333 vl~~  336 (488)
T 3ond_A          333 IIML  336 (488)
T ss_dssp             SBCH
T ss_pred             hhhH
Confidence            8753

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.90  E-value=1e-05  Score=76.36  Aligned_cols=65  Identities=22%  Similarity=0.345  Sum_probs=56.9

Q ss_pred             hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCCCCCCCC
Q 027064          161 SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQAMMVTM  226 (229)
Q Consensus       161 ~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~p~~i~~  226 (229)
                      .+..+.||+|+|||.|.+ |+.+|..|...|++|+++++..             .++.+.+++||+||.+++.+++|+.
T Consensus       251 ~~~~l~GktVgIIG~G~I-G~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~~t~~lI~~  328 (479)
T 1v8b_A          251 TDFLISGKIVVICGYGDV-GKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKL  328 (479)
T ss_dssp             HCCCCTTSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSSSSBCH
T ss_pred             cccccCCCEEEEEeeCHH-HHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECCChhhhcCH
Confidence            466899999999999995 9999999999999999997642             2567889999999999999998864

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.90  E-value=2.6e-05  Score=68.25  Aligned_cols=73  Identities=21%  Similarity=0.387  Sum_probs=57.6

Q ss_pred             CHHHHHH-HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------CHHhhhccCc
Q 027064          150 TPKGCLE-LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------DPESIVREAD  212 (229)
Q Consensus       150 Ta~av~~-lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~l~~~~~~aD  212 (229)
                      ++..++. +|...+.++.||+|.|||.|.+ |+.++..|...|++|+++++...                ++.+.++++|
T Consensus       137 vae~a~~~~l~~~~~~l~g~~v~IiG~G~i-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aD  215 (293)
T 3d4o_A          137 TAEGTIMMAIQHTDFTIHGANVAVLGLGRV-GMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVD  215 (293)
T ss_dssp             HHHHHHHHHHHHCSSCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCS
T ss_pred             HHHHHHHHHHHhcCCCCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCC
Confidence            3444554 4566678899999999999995 99999999999999999987421                3456688999


Q ss_pred             EEEEecCCCCCC
Q 027064          213 IVIAAAGQAMMV  224 (229)
Q Consensus       213 ivisA~g~p~~i  224 (229)
                      +||.+++. +++
T Consensus       216 vVi~~~p~-~~i  226 (293)
T 3d4o_A          216 VCINTIPA-LVV  226 (293)
T ss_dssp             EEEECCSS-CCB
T ss_pred             EEEECCCh-HHh
Confidence            99999964 444

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=97.86  E-value=0.00069  Score=61.23  Aligned_cols=58  Identities=19%  Similarity=0.296  Sum_probs=51.0

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------CCHHhhhccCcEEEEecCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------~~l~~~~~~aDivisA~g~  220 (229)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.+++..            .++.+.+++||+|+.+++-
T Consensus       168 g~~l~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Pl  237 (345)
T 4g2n_A          168 GMGLTGRRLGIFGMGRI-GRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPG  237 (345)
T ss_dssp             BCCCTTCEEEEESCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCC
T ss_pred             ccccCCCEEEEEEeChh-HHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCC
Confidence            45789999999999996 9999999999999999987752            2677889999999999874

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.85  E-value=2.1e-05  Score=72.18  Aligned_cols=74  Identities=20%  Similarity=0.297  Sum_probs=56.7

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-----------------CHHhhhccC
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-----------------DPESIVREA  211 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-----------------~l~~~~~~a  211 (229)
                      +++..+++.+....++.|++|+|||.|.+ |+.++..|...|+ .|+++++...                 ++.+.+..+
T Consensus       150 ~a~~av~~a~~~~~~l~g~~VlIiGaG~i-G~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~a  228 (404)
T 1gpj_A          150 IGSAAVELAERELGSLHDKTVLVVGAGEM-GKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARS  228 (404)
T ss_dssp             HHHHHHHHHHHHHSCCTTCEEEEESCCHH-HHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTC
T ss_pred             HHHHHHHHHHHHhccccCCEEEEEChHHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCC
Confidence            45555565553222578999999999995 9999999999999 8999987421                 233556789


Q ss_pred             cEEEEecCCCCCC
Q 027064          212 DIVIAAAGQAMMV  224 (229)
Q Consensus       212 DivisA~g~p~~i  224 (229)
                      |+||++||.+..+
T Consensus       229 DvVi~at~~~~~~  241 (404)
T 1gpj_A          229 DVVVSATAAPHPV  241 (404)
T ss_dssp             SEEEECCSSSSCC
T ss_pred             CEEEEccCCCCce
Confidence            9999999988764

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=97.80  E-value=0.00097  Score=61.82  Aligned_cols=58  Identities=22%  Similarity=0.311  Sum_probs=50.8

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------CCHHhhhccCcEEEEecCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------~~l~~~~~~aDivisA~g~  220 (229)
                      +.++.||++.|||-|.+ |+++|..|...|++|+.+++..          .++.+.+++||+|+.+++-
T Consensus       151 ~~el~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPl  218 (416)
T 3k5p_A          151 SREVRGKTLGIVGYGNI-GSQVGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPS  218 (416)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC
T ss_pred             CccCCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCC
Confidence            45789999999999996 9999999999999999997642          2688899999999999874

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.77  E-value=6.1e-05  Score=66.03  Aligned_cols=65  Identities=20%  Similarity=0.367  Sum_probs=53.6

Q ss_pred             HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------CCHHhhhccCcEEEEecCCCC
Q 027064          159 KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       159 ~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      +..+.++.|+++.|||.|.+ |+.++..|...|++|+++++..                .++.+.+++||+||.+++. +
T Consensus       149 ~~~~~~l~g~~v~IiG~G~i-G~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~  226 (300)
T 2rir_A          149 QHTDYTIHGSQVAVLGLGRT-GMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-M  226 (300)
T ss_dssp             HTCSSCSTTSEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-C
T ss_pred             HhcCCCCCCCEEEEEcccHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-h
Confidence            34567899999999999995 9999999999999999998742                1355678899999999985 5


Q ss_pred             CCC
Q 027064          223 MVT  225 (229)
Q Consensus       223 ~i~  225 (229)
                      ++.
T Consensus       227 ~i~  229 (300)
T 2rir_A          227 ILN  229 (300)
T ss_dssp             CBC
T ss_pred             hhC
Confidence            543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.75  E-value=1.4e-05  Score=72.11  Aligned_cols=131  Identities=19%  Similarity=0.198  Sum_probs=83.1

Q ss_pred             HHcCC-eeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEE-eCCCCCCCCHHHHHhcCCccCcccc-c----Cccchhhh
Q 027064           65 AEVGI-KSFDIDLPEQVSEAELISKVHELNVMPDVHGILV-QLPLPKHINEEKVLGEISLEKDVDG-F----HPLNIGKL  137 (229)
Q Consensus        65 ~~~Gi-~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlv-q~Plp~~i~~~~i~~~I~p~KDVDg-~----~~~N~g~l  137 (229)
                      .+.|. .+.+.+++.  + .++.+.+.+.    ++.|+.+ ..|++.+     .+..++|...+-| +    ...|+.+.
T Consensus        84 ~~~g~~~~~y~~~~~--~-~~l~~~l~~~----gi~~~~~etvp~k~~-----~~~~l~~~s~~Ag~~a~~~gA~nt~~~  151 (361)
T 1pjc_A           84 MQKDQLLFTYLHLAA--A-RELTEQLMRV----GLTAIAYETVELPNR-----SLPLLTPMSIIAGRLSVQFGARFLERQ  151 (361)
T ss_dssp             CCTTCEEEECCCGGG--C-HHHHHHHHHH----TCEEEEGGGCCCTTS-----CCTTTHHHHHHHHHHHHHHHHHHTSGG
T ss_pred             hcCCCEEEEEecccc--C-HHHHHHHHHc----CCeEEEEeeeEcccC-----CccccCcchHHHHHHHHHHHHHHHhhc
Confidence            34674 666666653  3 4677777766    5789887 7887632     2233444333333 1    34454444


Q ss_pred             hccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------
Q 027064          138 AMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------  202 (229)
Q Consensus       138 ~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------  202 (229)
                      ..|   .+|.          +... ..+.+++|+|+|+|. +|+.++..|...|++|+++++...               
T Consensus       152 ~~g---~G~~----------l~~l-~~l~~~~VlViGaGg-vG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~  216 (361)
T 1pjc_A          152 QGG---RGVL----------LGGV-PGVKPGKVVILGGGV-VGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL  216 (361)
T ss_dssp             GTS---CCCC----------TTCB-TTBCCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE
T ss_pred             cCC---Ccee----------ccCC-CCCCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEe
Confidence            322   1232          1101 136789999999987 599999999999999999977421               


Q ss_pred             ------CHHhhhccCcEEEEecCCCC
Q 027064          203 ------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       203 ------~l~~~~~~aDivisA~g~p~  222 (229)
                            ++.+.++.+|+||+++|.|.
T Consensus       217 ~~~~~~~~~~~~~~~DvVI~~~~~~~  242 (361)
T 1pjc_A          217 LYSNSAEIETAVAEADLLIGAVLVPG  242 (361)
T ss_dssp             EECCHHHHHHHHHTCSEEEECCCCTT
T ss_pred             eeCCHHHHHHHHcCCCEEEECCCcCC
Confidence                  12244668999999998876

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.73  E-value=3.2e-05  Score=66.10  Aligned_cols=59  Identities=19%  Similarity=0.304  Sum_probs=48.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-CH-----------------HhhhccCcEEEEecCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-DP-----------------ESIVREADIVIAAAGQAM  222 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-~l-----------------~~~~~~aDivisA~g~p~  222 (229)
                      .+++||+|+|||.|. ||...+.+|++.||.|+++..... .+                 .+.+..+|+||+|||.|.
T Consensus        27 l~L~gk~VLVVGgG~-va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~  103 (223)
T 3dfz_A           27 LDLKGRSVLVVGGGT-IATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQA  103 (223)
T ss_dssp             ECCTTCCEEEECCSH-HHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTH
T ss_pred             EEcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHH
Confidence            478999999999999 599999999999999999865421 11                 134678999999999874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.71  E-value=3e-05  Score=71.25  Aligned_cols=63  Identities=25%  Similarity=0.222  Sum_probs=50.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------------------------CHH
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------------------------DPE  205 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------------------------~l~  205 (229)
                      +.+++|+|+|.|.+ |..++.+|...||.|++++++..                                       ++.
T Consensus       182 v~~~kV~ViG~G~i-G~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          182 VKPASALVLGVGVA-GLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             ECCCEEEEESCSHH-HHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             cCCCEEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            47899999999985 99999999999999999977521                                       244


Q ss_pred             hhhccCcEEEEecCCC-----CCCCCCC
Q 027064          206 SIVREADIVIAAAGQA-----MMVTMGI  228 (229)
Q Consensus       206 ~~~~~aDivisA~g~p-----~~i~~~~  228 (229)
                      +.+++|||||+++..|     ++|+.+|
T Consensus       261 e~l~~aDIVI~tv~iPg~~ap~Lvt~em  288 (381)
T 3p2y_A          261 DAITKFDIVITTALVPGRPAPRLVTAAA  288 (381)
T ss_dssp             HHHTTCSEEEECCCCTTSCCCCCBCHHH
T ss_pred             HHHhcCCEEEECCCCCCcccceeecHHH
Confidence            6789999999987544     5676554

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=97.70  E-value=8.8e-05  Score=67.63  Aligned_cols=77  Identities=19%  Similarity=0.244  Sum_probs=55.4

Q ss_pred             cCCHHHHHHH----HHH-hCC-CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH--------------Hhh
Q 027064          148 PCTPKGCLEL----LKR-SGV-TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP--------------ESI  207 (229)
Q Consensus       148 PcTa~av~~l----L~~-~~~-~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l--------------~~~  207 (229)
                      +.|++++...    +++ ++. +++||+|+|+|.|.+ |..+|..|.+.|++|+++++.-..+              .+.
T Consensus       148 ~aTg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~V-G~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~l  226 (364)
T 1leh_A          148 PVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNV-AKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAI  226 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGT
T ss_pred             cchhhHHHHHHHHHHHhhccccCCCcCEEEEECchHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHH
Confidence            5677766654    454 365 799999999999995 9999999999999999887642211              122


Q ss_pred             h-ccCcEEEEecCCCCCCCC
Q 027064          208 V-READIVIAAAGQAMMVTM  226 (229)
Q Consensus       208 ~-~~aDivisA~g~p~~i~~  226 (229)
                      + .++||++.+. ..+.|+.
T Consensus       227 l~~~~DIvip~a-~~~~I~~  245 (364)
T 1leh_A          227 YGVTCDIFAPCA-LGAVLND  245 (364)
T ss_dssp             TTCCCSEEEECS-CSCCBST
T ss_pred             hccCCcEeeccc-hHHHhCH
Confidence            2 2789999875 4445543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.66  E-value=7.2e-05  Score=68.05  Aligned_cols=36  Identities=22%  Similarity=0.224  Sum_probs=32.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+.|++|+|+|.|.+ |+.++.++...|+.|+++++.
T Consensus       169 ~l~g~~V~ViGaG~i-G~~aa~~a~~~Ga~V~~~d~~  204 (384)
T 1l7d_A          169 TVPPARVLVFGVGVA-GLQAIATAKRLGAVVMATDVR  204 (384)
T ss_dssp             EECCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCC
Confidence            578999999999985 999999999999999999764

>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}

Probab=97.65  E-value=6.4e-05  Score=70.54  Aligned_cols=177  Identities=18%  Similarity=0.141  Sum_probs=123.5

Q ss_pred             CCCeEEEEEECCCc---------ccHHHHHHHHHHHHHc-CCeeeeecCCCCC-----CHHHHHHHHHHhcCCCCCcEEE
Q 027064           38 KVPGLAVVIVGGRK---------DSQSYVSMKRKACAEV-GIKSFDIDLPEQV-----SEAELISKVHELNVMPDVHGIL  102 (229)
Q Consensus        38 ~~P~LaiI~vg~~~---------~s~~Y~~~k~k~a~~~-Gi~~~~~~l~~~~-----~~~el~~~I~~lN~d~~v~GIl  102 (229)
                      +.+.++||.=|+.-         ++.-=...|.-.+..+ ||++..+.|+...     +.++|.+.++.+-  |++-||.
T Consensus        89 kgn~VaVVTDG~aILGLGDiG~~agmpImeGKl~Lyk~~aGId~lPI~LD~gt~~~~~d~defve~v~~~~--P~fG~In  166 (487)
T 3nv9_A           89 RGNFVGVVSDSTRVLGDGDVTPPGGLGVMEGKALLMKYLGGIDAVPICIDSKNKEGKNDPDAVIEFVQRIQ--HTFGAIN  166 (487)
T ss_dssp             GGGEEEEEECSSSBGGGBCCCGGGGHHHHHHHHHHHHHHHCCEEEEEECCCBCTTSCBCHHHHHHHHHHHG--GGCSEEE
T ss_pred             cCCEEEEEEcCceeeeccccccccCCchhhhHHHHHHhcCCCceeeeEEeCCCccccCCHHHHHHHHHHhC--CCCCeec
Confidence            44577777766541         2334445677777665 8999999998641     4799999999986  5576765


Q ss_pred             EeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHH
Q 027064          103 VQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLP  182 (229)
Q Consensus       103 vq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~p  182 (229)
                      +.  -.+.-+--++.+....+=|+.-||.-          ..+-.-+|..|++.-|+-.+.+++.-++|+.|+|.. |-.
T Consensus       167 lE--Df~ap~af~il~ryr~~~~ipvFnDD----------~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaA-Gig  233 (487)
T 3nv9_A          167 LE--DISQPNCYKILDVLRESCDIPVWHDD----------QQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSS-NTT  233 (487)
T ss_dssp             EC--SCCTTHHHHHHHHHHHHCSSCEEETT----------THHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHH-HHH
T ss_pred             Hh--hcCCchHHHHHHHHHhhccCCccccc----------cchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHH
Confidence            42  11111222333333222244444432          334445677899999999999999999999999998 999


Q ss_pred             HHHHHhhCCC---EEEEEcCC---C---------------------------CCHHhhhccCcEEEEecCC-CCCCCCCC
Q 027064          183 VSLLLLKADA---TVTIVHSH---T---------------------------TDPESIVREADIVIAAAGQ-AMMVTMGI  228 (229)
Q Consensus       183 la~~L~~~~a---tVtv~~~~---t---------------------------~~l~~~~~~aDivisA~g~-p~~i~~~~  228 (229)
                      ++.+|...|.   .+++|+++   +                           .+|.+.++.+|++|-.++. |+.+++||
T Consensus       234 ia~ll~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S~~~pg~ft~e~  313 (487)
T 3nv9_A          234 CLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLSTPGPGVVKAEW  313 (487)
T ss_dssp             HHHHHHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECCCSSCCCCCHHH
T ss_pred             HHHHHHHcCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEecccCCCCCCHHH
Confidence            9999999998   69999774   1                           1355778889999988844 89999877


Q ss_pred             C
Q 027064          229 L  229 (229)
Q Consensus       229 v  229 (229)
                      |
T Consensus       314 V  314 (487)
T 3nv9_A          314 I  314 (487)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=97.61  E-value=8.9e-05  Score=70.18  Aligned_cols=63  Identities=24%  Similarity=0.398  Sum_probs=54.0

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCCCCCCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQAMMVT  225 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~p~~i~  225 (229)
                      +..+.|++|+|+|.|. ||+.+++.|...|++|+++++..             .++.+.++.+|+||.++|.++++.
T Consensus       269 ~~~l~GktV~IiG~G~-IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atgt~~~i~  344 (494)
T 3ce6_A          269 DALIGGKKVLICGYGD-VGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIM  344 (494)
T ss_dssp             CCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSSSSCSBC
T ss_pred             CCCCCcCEEEEEccCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCCCHHHHH
Confidence            4568999999999998 49999999999999999997642             245577889999999999999875

>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}

Probab=97.59  E-value=0.00012  Score=67.27  Aligned_cols=64  Identities=20%  Similarity=0.317  Sum_probs=55.3

Q ss_pred             HHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC---------CCCHHhhhccCcEEEEecC
Q 027064          155 LELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH---------TTDPESIVREADIVIAAAG  219 (229)
Q Consensus       155 ~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~---------t~~l~~~~~~aDivisA~g  219 (229)
                      +.+.++.+.++.||++.|||.|.+ |+++|..|...|++|+.+++.         ..++.+.+++||+|+.+++
T Consensus       107 L~l~r~~g~~l~gktvGIIGlG~I-G~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~P  179 (381)
T 3oet_A          107 LMLAERDGFSLRDRTIGIVGVGNV-GSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTP  179 (381)
T ss_dssp             HHHHHHTTCCGGGCEEEEECCSHH-HHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCC
T ss_pred             HHHHHhcCCccCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCc
Confidence            345566788999999999999996 999999999999999999652         2368899999999999987

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.55  E-value=9e-05  Score=68.55  Aligned_cols=64  Identities=22%  Similarity=0.242  Sum_probs=50.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------------------------------
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------------------------------  202 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------------------------------  202 (229)
                      .+.+.+|+|+|.|. +|..++.+|...||.|+++++...                                         
T Consensus       187 ~v~~~kV~ViG~G~-iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~  265 (405)
T 4dio_A          187 TVPAAKIFVMGAGV-AGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ  265 (405)
T ss_dssp             EECCCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHH
T ss_pred             CcCCCEEEEECCcH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhh
Confidence            35789999999998 599999999999999999976421                                         


Q ss_pred             --CHHhhhccCcEEEEecC-----CCCCCCCCC
Q 027064          203 --DPESIVREADIVIAAAG-----QAMMVTMGI  228 (229)
Q Consensus       203 --~l~~~~~~aDivisA~g-----~p~~i~~~~  228 (229)
                        ++.+.++.|||||.++.     .|++|+.+|
T Consensus       266 ~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~em  298 (405)
T 4dio_A          266 AALVAEHIAKQDIVITTALIPGRPAPRLVTREM  298 (405)
T ss_dssp             HHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHH
T ss_pred             HhHHHHHhcCCCEEEECCcCCCCCCCEEecHHH
Confidence              23456789999999865     445677654

>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}

Probab=97.54  E-value=0.00017  Score=66.16  Aligned_cols=65  Identities=18%  Similarity=0.222  Sum_probs=55.0

Q ss_pred             HHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC---------CCCHHhhhccCcEEEEecC
Q 027064          154 CLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH---------TTDPESIVREADIVIAAAG  219 (229)
Q Consensus       154 v~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~---------t~~l~~~~~~aDivisA~g  219 (229)
                      ++.+.++.+.++.||++.|||.|.+ |+++|..|...|++|+.+++.         ..++.+.+++||+|+.+++
T Consensus       103 lL~l~r~~~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~P  176 (380)
T 2o4c_A          103 LLAMAEVRGADLAERTYGVVGAGQV-GGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTP  176 (380)
T ss_dssp             HHHHHHHHTCCGGGCEEEEECCSHH-HHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCC
T ss_pred             HHHHHhhhhcccCCCEEEEEeCCHH-HHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEecc
Confidence            3455566788999999999999996 999999999999999998642         2367788999999999986

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.50  E-value=5.1e-05  Score=69.76  Aligned_cols=35  Identities=17%  Similarity=0.192  Sum_probs=32.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.|++|+|+|.|.+ |..++.++...|+.|++++++
T Consensus       170 l~g~~V~ViGaG~i-G~~aa~~a~~~Ga~V~v~D~~  204 (401)
T 1x13_A          170 VPPAKVMVIGAGVA-GLAAIGAANSLGAIVRAFDTR  204 (401)
T ss_dssp             ECCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSC
T ss_pred             cCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCC
Confidence            67999999999985 999999999999999999864

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=97.47  E-value=0.00025  Score=63.04  Aligned_cols=57  Identities=23%  Similarity=0.258  Sum_probs=50.0

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------CCHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------~~l~~~~~~aDivisA~g~  220 (229)
                      .++.||++.|||.|.+ |+.+|..|...|++|+.+++..       .++.+.+++||+|+.+++.
T Consensus       140 ~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~l~ell~~aDvV~l~~p~  203 (311)
T 2cuk_A          140 LDLQGLTLGLVGMGRI-GQAVAKRALAFGMRVVYHARTPKPLPYPFLSLEELLKEADVVSLHTPL  203 (311)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSSSCBCCHHHHHHHCSEEEECCCC
T ss_pred             cCCCCCEEEEEEECHH-HHHHHHHHHHCCCEEEEECCCCcccccccCCHHHHHhhCCEEEEeCCC
Confidence            4789999999999996 9999999999999999987653       2577889999999999764

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=97.46  E-value=0.00026  Score=63.85  Aligned_cols=56  Identities=23%  Similarity=0.323  Sum_probs=49.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g  219 (229)
                      .++.||++.|||.|.+ |+.+|..|...|++|+.+++..         .++.+.+++||+|+.+++
T Consensus       167 ~~l~gktiGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP  231 (340)
T 4dgs_A          167 HSPKGKRIGVLGLGQI-GRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVA  231 (340)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC-
T ss_pred             ccccCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCC
Confidence            5789999999999996 9999999999999999987653         267889999999999987

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=97.44  E-value=0.00021  Score=63.99  Aligned_cols=57  Identities=16%  Similarity=0.239  Sum_probs=49.5

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g  219 (229)
                      +.++.||++.|||.|.+ |+++|..|...|++|+.+++...            ++.+.+++||+|+.+++
T Consensus       132 ~~~l~gktvGIiGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lP  200 (324)
T 3evt_A          132 TSTLTGQQLLIYGTGQI-GQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALP  200 (324)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCC
T ss_pred             CccccCCeEEEECcCHH-HHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCC
Confidence            56789999999999996 99999999999999999876421            46688999999999986

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=97.43  E-value=0.00028  Score=63.25  Aligned_cols=57  Identities=16%  Similarity=0.235  Sum_probs=49.8

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------CCHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------~~l~~~~~~aDivisA~g  219 (229)
                      +.++.||++.|||.|.+ |+++|..|...|++|+.+++..            .++.+.+++||+|+.+++
T Consensus       135 ~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lP  203 (324)
T 3hg7_A          135 YQGLKGRTLLILGTGSI-GQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLP  203 (324)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCC
T ss_pred             CcccccceEEEEEECHH-HHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCC
Confidence            45789999999999996 9999999999999999987642            146788999999999987

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=97.43  E-value=0.00026  Score=63.64  Aligned_cols=58  Identities=21%  Similarity=0.307  Sum_probs=50.3

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g~  220 (229)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+++++..         .++.+.+++||+|+.+++-
T Consensus       159 ~~~l~g~~vgIIG~G~i-G~~vA~~l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~  225 (333)
T 3ba1_A          159 TTKFSGKRVGIIGLGRI-GLAVAERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPL  225 (333)
T ss_dssp             CCCCTTCCEEEECCSHH-HHHHHHHHHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCC
T ss_pred             ccccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCchhccCceecCCHHHHHhcCCEEEEecCC
Confidence            35789999999999996 9999999999999999987642         2577889999999999874

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=97.41  E-value=0.00028  Score=63.01  Aligned_cols=58  Identities=10%  Similarity=0.197  Sum_probs=49.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g~p  221 (229)
                      .++.|+++.|||.|.+ |+++|..|...|++|+++++...             ++.+.+++||+|+.+++-+
T Consensus       151 ~~l~g~~vgIIG~G~i-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~  221 (330)
T 2gcg_A          151 YGLTQSTVGIIGLGRI-GQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLT  221 (330)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCC
T ss_pred             cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCC
Confidence            4689999999999996 99999999999999999876432             4667789999999999754

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=97.41  E-value=0.00024  Score=62.78  Aligned_cols=56  Identities=23%  Similarity=0.311  Sum_probs=49.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g~  220 (229)
                      ++.||++.|||.|.+ |+++|..|...|++|+.+++..         .++.+.+++||+|+.+++-
T Consensus       119 ~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~  183 (290)
T 3gvx_A          119 LLYGKALGILGYGGI-GRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPL  183 (290)
T ss_dssp             CCTTCEEEEECCSHH-HHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCC
T ss_pred             eeecchheeeccCch-hHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeec
Confidence            589999999999996 9999999999999999997643         2678899999999999874

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=97.39  E-value=0.00023  Score=63.55  Aligned_cols=57  Identities=11%  Similarity=0.079  Sum_probs=49.3

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g  219 (229)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.+++...            ++.+.+++||+|+.+++
T Consensus       134 ~~~l~g~tvGIiG~G~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~P  202 (315)
T 3pp8_A          134 EYTREEFSVGIMGAGVL-GAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLP  202 (315)
T ss_dssp             CCCSTTCCEEEECCSHH-HHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCC
T ss_pred             CCCcCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecC
Confidence            34789999999999996 99999999999999999876422            46788999999999976

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=97.38  E-value=0.00038  Score=61.79  Aligned_cols=58  Identities=19%  Similarity=0.296  Sum_probs=50.2

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g~  220 (229)
                      +.++.|+++.|||.|.+ |+++|..|...|++|+++++...            ++.+.+++||+|+.+++.
T Consensus       137 ~~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~  206 (313)
T 2ekl_A          137 GLELAGKTIGIVGFGRI-GTKVGIIANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTV  206 (313)
T ss_dssp             CCCCTTCEEEEESCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCC
T ss_pred             CCCCCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccC
Confidence            45799999999999996 99999999999999999876432            466788999999999873

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=97.36  E-value=0.00037  Score=61.70  Aligned_cols=56  Identities=27%  Similarity=0.331  Sum_probs=49.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------CCHHhhhccCcEEEEecCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------~~l~~~~~~aDivisA~g~  220 (229)
                      ++.||++.|||.|.+ |+.+|..|...|++|+.+++..        .++.+.+++||+|+.+++-
T Consensus       121 ~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~~l~ell~~aDvV~l~~P~  184 (303)
T 1qp8_A          121 LIQGEKVAVLGLGEI-GTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPL  184 (303)
T ss_dssp             CCTTCEEEEESCSTH-HHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCC
T ss_pred             CCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCccccCcccCCCHHHHHhhCCEEEEeCcC
Confidence            689999999999996 9999999999999999987642        2577889999999999864

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=97.36  E-value=0.00031  Score=62.88  Aligned_cols=57  Identities=19%  Similarity=0.205  Sum_probs=49.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------CHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~l~~~~~~aDivisA~g~  220 (229)
                      .++.||++.|||.|.+ |+.+|..|...|++|+++++...          ++.+.+++||+|+.+++-
T Consensus       142 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~  208 (331)
T 1xdw_A          142 KEVRNCTVGVVGLGRI-GRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPY  208 (331)
T ss_dssp             CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCC
T ss_pred             cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCC
Confidence            4688999999999996 99999999999999999876432          567889999999998774

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=97.36  E-value=0.00044  Score=61.89  Aligned_cols=58  Identities=22%  Similarity=0.347  Sum_probs=50.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g~p  221 (229)
                      .++.||++.|||.|.+ |+.+|..|...|++|+.+++...            ++.+.+++||+|+.+++..
T Consensus       142 ~~l~g~~vgIIG~G~i-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~  211 (333)
T 2d0i_A          142 ESLYGKKVGILGMGAI-GKAIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLT  211 (333)
T ss_dssp             CCSTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCC
T ss_pred             CCCCcCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCC
Confidence            5799999999999996 99999999999999999876432            4567789999999999865

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=97.36  E-value=0.0003  Score=63.53  Aligned_cols=57  Identities=23%  Similarity=0.252  Sum_probs=50.1

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------CHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~l~~~~~~aDivisA~g~  220 (229)
                      .++.||++.|||-|.+ |+++|..|...|++|+.+++...          ++.+.+++||+|+.+++-
T Consensus       144 ~~l~gktvgIiGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Pl  210 (343)
T 2yq5_A          144 NEIYNLTVGLIGVGHI-GSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPL  210 (343)
T ss_dssp             CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCC
T ss_pred             cccCCCeEEEEecCHH-HHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCC
Confidence            4678999999999996 99999999999999999977532          577889999999999884

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.35  E-value=0.00042  Score=61.34  Aligned_cols=57  Identities=19%  Similarity=0.356  Sum_probs=49.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g~  220 (229)
                      .++.|+++.|||.|.+ |+++|..|...|++|+.+++...            ++.+.+++||+|+.+++.
T Consensus       138 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~  206 (307)
T 1wwk_A          138 IELEGKTIGIIGFGRI-GYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPL  206 (307)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCC
T ss_pred             cccCCceEEEEccCHH-HHHHHHHHHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCC
Confidence            5789999999999996 99999999999999999876532            466788999999999873

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=97.35  E-value=0.0004  Score=62.24  Aligned_cols=58  Identities=17%  Similarity=0.208  Sum_probs=50.1

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g~  220 (229)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.+++...             ++.+.+++||+|+.+++-
T Consensus       140 ~~~l~g~tvGIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~  210 (330)
T 4e5n_A          140 GTGLDNATVGFLGMGAI-GLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPL  210 (330)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCC
T ss_pred             CCccCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCC
Confidence            35689999999999996 99999999999999999977531             466889999999999873

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=97.35  E-value=0.00043  Score=62.34  Aligned_cols=58  Identities=14%  Similarity=0.114  Sum_probs=50.0

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHh-hCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLL-KADATVTIVHSHTT--------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~-~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g~  220 (229)
                      +.++.||++.|||.|.+ |+.+|..|. ..|++|+.+++...              ++.+.+++||+|+.+++-
T Consensus       158 ~~~l~g~~vgIIG~G~I-G~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~  230 (348)
T 2w2k_A          158 AHNPRGHVLGAVGLGAI-QKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPY  230 (348)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             CcCCCCCEEEEEEECHH-HHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCC
Confidence            46799999999999996 999999999 99999999876532              566778999999999874

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=97.34  E-value=0.0005  Score=61.49  Aligned_cols=59  Identities=19%  Similarity=0.250  Sum_probs=50.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g~p~  222 (229)
                      .++.|+++.|||.|.+ |+++|..|...|++|+.+++...            ++.+.+++||+|+.+++.+.
T Consensus       146 ~~l~g~~vgIIG~G~i-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~  216 (334)
T 2dbq_A          146 YDVYGKTIGIIGLGRI-GQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTR  216 (334)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCT
T ss_pred             cCCCCCEEEEEccCHH-HHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCCh
Confidence            4789999999999996 99999999999999999876432            46677899999999998553

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=97.34  E-value=0.00045  Score=62.93  Aligned_cols=57  Identities=18%  Similarity=0.300  Sum_probs=49.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------CCHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------~~l~~~~~~aDivisA~g~  220 (229)
                      .++.||++.|||-|.+ |+++|..|...|++|+.+++..            .++.+.+++||+|+.+++-
T Consensus       172 ~~l~gktvGIIGlG~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Pl  240 (365)
T 4hy3_A          172 RLIAGSEIGIVGFGDL-GKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAV  240 (365)
T ss_dssp             CCSSSSEEEEECCSHH-HHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCS
T ss_pred             cccCCCEEEEecCCcc-cHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcC
Confidence            4688999999999996 9999999999999999987642            1577889999999998763

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=97.32  E-value=0.00036  Score=62.51  Aligned_cols=57  Identities=16%  Similarity=0.170  Sum_probs=49.7

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------CHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~l~~~~~~aDivisA~g~  220 (229)
                      .++.||++.|||.|.+ |+.+|..|...|++|+.+++...          ++.+.+++||+|+.+++.
T Consensus       141 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~  207 (333)
T 1dxy_A          141 KELGQQTVGVMGTGHI-GQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPG  207 (333)
T ss_dssp             CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCC
T ss_pred             cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCC
Confidence            5789999999999996 99999999999999999876432          577889999999999874

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=97.32  E-value=0.00055  Score=61.53  Aligned_cols=59  Identities=17%  Similarity=0.164  Sum_probs=50.7

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecCCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g~p  221 (229)
                      +.++.||++.|||-|.+ |+++|..|...|++|+.+++...            ++.+.+++||+|+.+++..
T Consensus       160 ~~~l~g~tvgIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t  230 (335)
T 2g76_A          160 GTELNGKTLGILGLGRI-GREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLL  230 (335)
T ss_dssp             BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCC
T ss_pred             CcCCCcCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCC
Confidence            35799999999999996 99999999999999999876431            5678899999999998754

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.30  E-value=0.00024  Score=52.04  Aligned_cols=53  Identities=25%  Similarity=0.270  Sum_probs=42.4

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC---------------------CHHhhhccCcEEEEecC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT---------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~---------------------~l~~~~~~aDivisA~g  219 (229)
                      .+++++|+|.|. +|+.++..|.+.| +.|+++.+...                     ++.+.++.+|+||.++|
T Consensus         4 ~~~~v~I~G~G~-iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~   78 (118)
T 3ic5_A            4 MRWNICVVGAGK-IGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP   78 (118)
T ss_dssp             TCEEEEEECCSH-HHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred             CcCeEEEECCCH-HHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence            478999999966 6999999999999 78998876421                     12345678999999986

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=97.30  E-value=0.00039  Score=57.78  Aligned_cols=53  Identities=23%  Similarity=0.290  Sum_probs=41.4

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g  219 (229)
                      +..+.++++.|||.|.+ |..++..|.+.|.+|+++++...    .+++||+||.+++
T Consensus        14 ~~~~~~~~I~iiG~G~m-G~~la~~l~~~g~~V~~~~~~~~----~~~~aD~vi~av~   66 (209)
T 2raf_A           14 NLYFQGMEITIFGKGNM-GQAIGHNFEIAGHEVTYYGSKDQ----ATTLGEIVIMAVP   66 (209)
T ss_dssp             ------CEEEEECCSHH-HHHHHHHHHHTTCEEEEECTTCC----CSSCCSEEEECSC
T ss_pred             ccccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCHH----HhccCCEEEEcCC
Confidence            45678999999999985 99999999999999999976533    5778999999986

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=97.30  E-value=0.00052  Score=61.12  Aligned_cols=57  Identities=12%  Similarity=0.147  Sum_probs=49.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC-CC-------------CCHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS-HT-------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~-~t-------------~~l~~~~~~aDivisA~g~  220 (229)
                      .++.|+++.|||.|.+ |+.+|..|...|++|+++++ ..             .++.+.+++||+|+.+++.
T Consensus       142 ~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~  212 (320)
T 1gdh_A          142 EKLDNKTLGIYGFGSI-GQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPS  212 (320)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccC
Confidence            4689999999999996 99999999999999999987 32             1567888999999999874

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.29  E-value=0.00047  Score=57.08  Aligned_cols=59  Identities=22%  Similarity=0.193  Sum_probs=46.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------CHHhhhccCcEEEEecCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      +++||+|+|.|+++.+|+.++..|+++|++|+++.+...                    .+.+.+...|+||.+.|...
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~   96 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSGP   96 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCCT
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCCC
Confidence            578999999999988999999999999999999876532                    12345667899999988643

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=97.29  E-value=0.00049  Score=62.13  Aligned_cols=57  Identities=18%  Similarity=0.244  Sum_probs=49.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~  220 (229)
                      .++.||++.|||.|.+ |+++|..|...|++|+.+++..             .++.+.+++||+|+.+++-
T Consensus       164 ~~l~g~tvGIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~  233 (347)
T 1mx3_A          164 ARIRGETLGIIGLGRV-GQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGL  233 (347)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             cCCCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCC
Confidence            4789999999999996 9999999999999999987642             1567889999999999874

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=97.28  E-value=0.00042  Score=62.06  Aligned_cols=57  Identities=16%  Similarity=0.221  Sum_probs=49.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------CHHhhhccCcEEEEecCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------~l~~~~~~aDivisA~g~  220 (229)
                      .++.|+++.|||.|.+ |+.+|..|...|++|+.+++...           ++.+.+++||+|+.+++.
T Consensus       142 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~  209 (333)
T 1j4a_A          142 REVRDQVVGVVGTGHI-GQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPD  209 (333)
T ss_dssp             CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCC
T ss_pred             ccCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCC
Confidence            4689999999999996 99999999999999999876431           677889999999999873

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.24  E-value=0.0003  Score=63.91  Aligned_cols=58  Identities=26%  Similarity=0.322  Sum_probs=47.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      .+.|++|+|+|.|. +|+.++..+...|++|+++++...                     ++.+.++.+|+||.++|.|.
T Consensus       165 ~l~g~~V~ViG~G~-iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~  243 (377)
T 2vhw_A          165 GVEPADVVVIGAGT-AGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG  243 (377)
T ss_dssp             TBCCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC
Confidence            47899999999988 599999999999999999876321                     23355778999999998775

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.24  E-value=0.00026  Score=60.08  Aligned_cols=62  Identities=19%  Similarity=0.284  Sum_probs=45.2

Q ss_pred             HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------------------CHHhhhc
Q 027064          159 KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------------------DPESIVR  209 (229)
Q Consensus       159 ~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------------------~l~~~~~  209 (229)
                      ++...++.+++|.|||.|.+ |.+++..|.+.|.+|+++++...                             +..+.++
T Consensus        11 ~~~~~~~~~~kIgiIG~G~m-G~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~   89 (245)
T 3dtt_A           11 HHENLYFQGMKIAVLGTGTV-GRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAA   89 (245)
T ss_dssp             --------CCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHH
T ss_pred             cccccccCCCeEEEECCCHH-HHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHh
Confidence            34456788999999999996 99999999999999999976421                             1235678


Q ss_pred             cCcEEEEecCCC
Q 027064          210 EADIVIAAAGQA  221 (229)
Q Consensus       210 ~aDivisA~g~p  221 (229)
                      +||+||.|+..+
T Consensus        90 ~aDvVilavp~~  101 (245)
T 3dtt_A           90 GAELVVNATEGA  101 (245)
T ss_dssp             HCSEEEECSCGG
T ss_pred             cCCEEEEccCcH
Confidence            899999998754

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=97.20  E-value=0.00036  Score=63.22  Aligned_cols=57  Identities=16%  Similarity=0.219  Sum_probs=49.9

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g  219 (229)
                      +.++.||++.|||.|.+ |+++|..|...|++|+.+++..             .++.+.+++||+|+.+++
T Consensus       155 ~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~P  224 (352)
T 3gg9_A          155 GRVLKGQTLGIFGYGKI-GQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLR  224 (352)
T ss_dssp             BCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCC
T ss_pred             CccCCCCEEEEEeECHH-HHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEecc
Confidence            35789999999999996 9999999999999999987631             267889999999999986

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=97.19  E-value=0.00066  Score=61.61  Aligned_cols=59  Identities=25%  Similarity=0.321  Sum_probs=50.6

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      +.++.||++.|||.|.+ |+.+|..|...|++ |+.+++..              .++.+.+++||+|+.+++-.
T Consensus       159 ~~~l~g~tvgIIG~G~I-G~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t  232 (364)
T 2j6i_A          159 AYDIEGKTIATIGAGRI-GYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLH  232 (364)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCS
T ss_pred             cccCCCCEEEEECcCHH-HHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCC
Confidence            45799999999999996 99999999999997 99987542              25778899999999998754

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.11  E-value=0.0016  Score=59.24  Aligned_cols=78  Identities=19%  Similarity=0.313  Sum_probs=57.7

Q ss_pred             cccCCHHHHHHHH----HHhCC-CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhh
Q 027064          146 FLPCTPKGCLELL----KRSGV-TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESI  207 (229)
Q Consensus       146 ~~PcTa~av~~lL----~~~~~-~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~  207 (229)
                      ..+.|.+|++..+    ++.+. +++||+|+|+|.|.+ |+.++..|...|++|.++++...             +..+.
T Consensus       149 ~~~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnV-G~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~el  227 (355)
T 1c1d_A          149 SAFTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAV-GGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDV  227 (355)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGG
T ss_pred             chhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHh
Confidence            3468988887665    45677 899999999999995 99999999999999997765311             22344


Q ss_pred             hc-cCcEEEEecCCCCCCC
Q 027064          208 VR-EADIVIAAAGQAMMVT  225 (229)
Q Consensus       208 ~~-~aDivisA~g~p~~i~  225 (229)
                      +. .+||++-+ ...+.|+
T Consensus       228 l~~~~DIliP~-A~~~~I~  245 (355)
T 1c1d_A          228 LSTPCDVFAPC-AMGGVIT  245 (355)
T ss_dssp             GGCCCSEEEEC-SCSCCBC
T ss_pred             hcCccceecHh-HHHhhcC
Confidence            44 78998765 3455554

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=97.10  E-value=0.0011  Score=61.14  Aligned_cols=59  Identities=15%  Similarity=0.253  Sum_probs=51.1

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------CCHHhhhccCcEEEEecCCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------~~l~~~~~~aDivisA~g~p  221 (229)
                      +.++.||++.|||-|.+ |+++|..|...|++|+.+++..          .++.+.+++||+|+.+++..
T Consensus       140 ~~el~gktlGiIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t  208 (404)
T 1sc6_A          140 SFEARGKKLGIIGYGHI-GTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPEN  208 (404)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSS
T ss_pred             ccccCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCC
Confidence            45799999999999996 9999999999999999987632          26778899999999998753

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=97.09  E-value=0.0012  Score=60.66  Aligned_cols=58  Identities=19%  Similarity=0.210  Sum_probs=50.0

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~  220 (229)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.+++..              .++.+.+++||+|+.+++-
T Consensus       186 ~~~l~gktvGIIGlG~I-G~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Pl  257 (393)
T 2nac_A          186 AYDLEAMHVGTVAAGRI-GLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPL  257 (393)
T ss_dssp             CCCCTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCC
T ss_pred             CccCCCCEEEEEeECHH-HHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCC
Confidence            45789999999999996 9999999999999999987642              2567889999999999873

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.06  E-value=0.00075  Score=58.24  Aligned_cols=53  Identities=21%  Similarity=0.310  Sum_probs=45.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ++|.|||.|.+ |.+++..|.+.|.+|+++++..              .++.+.+++||+||.+++.|
T Consensus         2 ~~i~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGLGIM-GSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSH
T ss_pred             CEEEEEeecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCH
Confidence            68999999995 9999999999999999997753              25667788999999999854

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.06  E-value=0.0005  Score=62.03  Aligned_cols=58  Identities=24%  Similarity=0.310  Sum_probs=45.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      .+.|++|+|+|.|. +|+.++..|...|++|+++++...                     ++.+.++.+|+||.++|.|.
T Consensus       163 ~l~~~~V~ViGaG~-iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~  241 (369)
T 2eez_A          163 GVAPASVVILGGGT-VGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG  241 (369)
T ss_dssp             BBCCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence            37899999999977 599999999999999999876421                     13355678999999999764

>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.05  E-value=0.02  Score=51.06  Aligned_cols=156  Identities=14%  Similarity=0.085  Sum_probs=102.9

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCC---HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVS---EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVL  117 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~---~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~  117 (229)
                      .++.+...   .|..---+=..++.++|.++..+.-. +.+   -|-+.+.++-|+.-  +|+|.+--|-  +-..+++.
T Consensus        47 ~la~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvls~~--~D~iviR~~~--~~~~~~lA  118 (309)
T 4f2g_A           47 TLAMIFEK---SSTRTRLSFEAGIFQLGGHAVFMSTR-DTQLGRGEPVEDSAQVISRM--VDIIMIRTFE--QDIIQRFA  118 (309)
T ss_dssp             EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECCS-SCEETBEECHHHHHHHHHHH--CSEEEEECSC--HHHHHHHH
T ss_pred             eEEEEecC---CChhhHhhHHHHHHHcCCeEEEcCcc-cccCCCCCCHHHHHHHHHHh--CCEEEEecCC--HHHHHHHH
Confidence            45555533   46665666778899999998877522 211   13344444444433  6799998663  22223333


Q ss_pred             hcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          118 GEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       118 ~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      +..       ++--+|.|    +   ....||=+.+=+--+++...+++|++|++||-+.-|.+.++..|..-|++|++|
T Consensus       119 ~~~-------~vPVINag----~---~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~  184 (309)
T 4f2g_A          119 ENS-------RVPVINGL----T---NEYHPCQVLADIFTYYEHRGPIRGKTVAWVGDANNMLYTWIQAARILDFKLQLS  184 (309)
T ss_dssp             HTC-------SSCEEEEE----C---SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEE
T ss_pred             HhC-------CCCEEECC----C---CccCcHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEE
Confidence            322       23455654    1   346699888855444444447999999999999999999999999999999988


Q ss_pred             cCC-------------------CCCHHhhhccCcEEEEec
Q 027064          198 HSH-------------------TTDPESIVREADIVIAAA  218 (229)
Q Consensus       198 ~~~-------------------t~~l~~~~~~aDivisA~  218 (229)
                      .-.                   +.++.+.++.||+|.+-+
T Consensus       185 ~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~  224 (309)
T 4f2g_A          185 TPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDV  224 (309)
T ss_dssp             CCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECC
T ss_pred             CCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecc
Confidence            432                   236778899999998754

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.04  E-value=0.00084  Score=58.83  Aligned_cols=57  Identities=16%  Similarity=0.140  Sum_probs=48.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ....++|.|||.|.+ |.+++..|.+.|.+|+++++..              .++.+.+++||+||.+++.+
T Consensus         6 ~~~~~~IgiIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~   76 (306)
T 3l6d_A            6 ESFEFDVSVIGLGAM-GTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDN   76 (306)
T ss_dssp             CCCSCSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSH
T ss_pred             ccCCCeEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCH
Confidence            345689999999996 9999999999999999998742              35667889999999999865

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.04  E-value=0.00048  Score=52.11  Aligned_cols=56  Identities=27%  Similarity=0.331  Sum_probs=41.6

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------------C---HHhh-hccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------------D---PESI-VREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------------~---l~~~-~~~aDivisA~g~p  221 (229)
                      +.+++++|+|.|. +|+.++..|.+.|+.|+++.+...                  +   +.+. +..+|+||.++|.+
T Consensus         4 ~~~~~v~I~G~G~-iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A            4 IKNKQFAVIGLGR-FGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN   81 (144)
T ss_dssp             --CCSEEEECCSH-HHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred             CcCCcEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence            4678999999977 599999999999999888755210                  1   1111 56799999999865

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.02  E-value=0.0008  Score=59.02  Aligned_cols=55  Identities=20%  Similarity=0.286  Sum_probs=47.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      +-++|.|||.|.+ |.+++..|.+.|..|+++++..              .++.+.++.||+||.+++.|
T Consensus        20 ~m~~I~iIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~   88 (310)
T 3doj_A           20 HMMEVGFLGLGIM-GKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDP   88 (310)
T ss_dssp             CSCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSH
T ss_pred             cCCEEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCH
Confidence            3479999999995 9999999999999999998752              25667788999999999865

>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...

Probab=97.00  E-value=0.044  Score=48.77  Aligned_cols=190  Identities=12%  Similarity=0.060  Sum_probs=124.2

Q ss_pred             hcccHHHHHHHHHHHHHHHHHHHhcCC---CC-CeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC----CCH
Q 027064           11 IIDGKAVAQTIRSEIAEEVRLLSEKYG---KV-PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ----VSE   82 (229)
Q Consensus        11 il~G~~la~~i~~~i~~~~~~l~~~~~---~~-P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~----~~~   82 (229)
                      +|+-..+.++=.+.+-+....+++...   .+ ..++.+...   .|..---+=.-++.++|..+..+.-...    -.-
T Consensus         9 ~ls~~dls~~ei~~ll~~A~~lk~~~~~~~L~gk~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~~S~~~kg   85 (310)
T 3csu_A            9 IISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFE---ASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKG   85 (310)
T ss_dssp             BCCGGGCCHHHHHHHHHHHHHHHHSCCTTTTTTCEEEEEESS---CCHHHHHHHHHHHHTTTCEEEEESCC-----CCSH
T ss_pred             ccchhhCCHHHHHHHHHHHHHHHhcccccccCCCEEEEEecC---CCccHHHHHHHHHHHhCCeEEEeCCCccchhhccC
Confidence            444444443333444444455554211   12 255655543   4666666778899999999888865443    134


Q ss_pred             HHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhC
Q 027064           83 AELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSG  162 (229)
Q Consensus        83 ~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~  162 (229)
                      |-+.+.++-|+.-  +|+|.+--|-  +-..+.+.+..      .++--+|.|-   |   ..+.||-+.+=+--+++..
T Consensus        86 Esl~DTarvls~~--~D~iviR~~~--~~~~~~la~~~------~~vPVINag~---G---~~~HPtQaLaDl~Ti~e~~  149 (310)
T 3csu_A           86 ETLADTISVISTY--VDAIVMRHPQ--EGAARLATEFS------GNVPVLNAGD---G---SNQHPTQTLLDLFTIQETQ  149 (310)
T ss_dssp             HHHHHHHHHHTTT--CSEEEEEESS--TTHHHHHHHHC------TTCCEEEEEE---T---TSCCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHh--CCEEEEECCC--hhHHHHHHHhc------CCCCEEcCcc---C---CCCCchHHHHHHHHHHHHh
Confidence            7888899988877  7899998773  33334444332      0233455431   1   3567998888766666665


Q ss_pred             CCCCCCeEEEEccc--hhhhHHHHHHHhhC-CCEEEEEcCC---------------------CCCHHhhhccCcEEEEec
Q 027064          163 VTIKGKRAVVVGRS--NIVGLPVSLLLLKA-DATVTIVHSH---------------------TTDPESIVREADIVIAAA  218 (229)
Q Consensus       163 ~~l~gk~v~ViG~s--~~VG~pla~~L~~~-~atVtv~~~~---------------------t~~l~~~~~~aDivisA~  218 (229)
                      .+++|++|++||-+  +-|.+.++..|..- |++|++|.-.                     +.++.+.++.||+|.+-.
T Consensus       150 g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~  229 (310)
T 3csu_A          150 GRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTR  229 (310)
T ss_dssp             SCSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC
T ss_pred             CCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECC
Confidence            68999999999996  34799999999999 9999998532                     235667899999998764


Q ss_pred             C
Q 027064          219 G  219 (229)
Q Consensus       219 g  219 (229)
                      -
T Consensus       230 ~  230 (310)
T 3csu_A          230 V  230 (310)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}

Probab=97.00  E-value=0.015  Score=52.18  Aligned_cols=186  Identities=15%  Similarity=0.124  Sum_probs=115.3

Q ss_pred             hcccHHHHHHHHHHHHHHHHHHHhcC---CCC-CeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHH
Q 027064           11 IIDGKAVAQTIRSEIAEEVRLLSEKY---GKV-PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEA   83 (229)
Q Consensus        11 il~G~~la~~i~~~i~~~~~~l~~~~---~~~-P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~   83 (229)
                      +|+-..+..+=...+-+....+++..   ..+ ..++.+...   .|..---+=..++.++|..+..+.- .+.   .-|
T Consensus        16 llsi~dls~~ei~~ll~~A~~lk~~~~~~~L~gk~la~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgE   91 (323)
T 3gd5_A           16 LLSLDDLDEAQLHALLTLAHQLKRGERVANLHGKVLGLVFLK---ASTRTRVSFTVAMYQLGGQVIDLSP-SNTQVGRGE   91 (323)
T ss_dssp             BSSGGGSCHHHHHHHHHHHHHHHHTSSCCCCTTCEEEEEESS---CCHHHHHHHHHHHHHTTCEEEEC-----------C
T ss_pred             ccchHhCCHHHHHHHHHHHHHHHhcccccccCCCEEEEEecC---CCcchHhhHHHHHHHcCCeEEEeCc-ccccCCCCC
Confidence            44444444333333434444554421   112 245555533   4666666677889999999887642 211   125


Q ss_pred             HHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCC
Q 027064           84 ELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGV  163 (229)
Q Consensus        84 el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~  163 (229)
                      -+.+.++-|+.-  +|+|.+--|-.  -..+++.+..       ++--+|.|       ...+-||=+.+=+--+++...
T Consensus        92 sl~DTarvLs~~--~D~iviR~~~~--~~~~~lA~~~-------~vPVINag-------~~~~HPtQaLaDl~Ti~e~~g  153 (323)
T 3gd5_A           92 PVRDTARVLGRY--VDGLAIRTFAQ--TELEEYAHYA-------GIPVINAL-------TDHEHPCQVVADLLTIRENFG  153 (323)
T ss_dssp             CHHHHHHHHTTT--CSEEEEECSSH--HHHHHHHHHH-------CSCEEEEE-------CSSCCHHHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHh--CCEEEEecCCh--hHHHHHHHhC-------CCCEEeCC-------CCCCCcHHHHHHHHHHHHHhC
Confidence            577788888766  78999986632  2222232221       23345654       135679988885544444434


Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      +++|++|++||-++-|.+.++..|...|++|++|.-.+                         .++.+.++.||+|.+-.
T Consensus       154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~  233 (323)
T 3gd5_A          154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV  233 (323)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence            79999999999998899999999998999999885432                         25567789999998754

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.98  E-value=0.00085  Score=59.19  Aligned_cols=56  Identities=20%  Similarity=0.377  Sum_probs=47.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ...++|.|||.|.+ |.+++..|.+.|..|+++++..              .++.+.+++||+||.+++.|
T Consensus        29 ~~~~~I~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~   98 (320)
T 4dll_A           29 PYARKITFLGTGSM-GLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENG   98 (320)
T ss_dssp             CCCSEEEEECCTTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSH
T ss_pred             cCCCEEEEECccHH-HHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCH
Confidence            35689999999996 9999999999999999998742              25667789999999999854

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.95  E-value=0.0016  Score=51.98  Aligned_cols=57  Identities=23%  Similarity=0.297  Sum_probs=45.7

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      ++++|+|.|+++.+|+.++..|+++|++|+++.+...                     ++.+.++.+|+||.++|...
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~   79 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN   79 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCC
Confidence            3589999999888999999999999999998865311                     13355778899999998654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.94  E-value=0.0016  Score=56.67  Aligned_cols=32  Identities=22%  Similarity=0.351  Sum_probs=29.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.|||.|.+ |.++|..|++.|..|+++++.
T Consensus        16 ~~I~VIG~G~m-G~~iA~~la~~G~~V~~~d~~   47 (302)
T 1f0y_A           16 KHVTVIGGGLM-GAGIAQVAAATGHTVVLVDQT   47 (302)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEECCCHH-HHHHHHHHHhCCCeEEEEECC
Confidence            68999999995 999999999999999998763

>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*

Probab=96.93  E-value=0.0017  Score=61.58  Aligned_cols=59  Identities=24%  Similarity=0.272  Sum_probs=50.4

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecCCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g~p  221 (229)
                      +.++.||++.|||.|.+ |+++|..|...|++|+.+++...            ++.+.+++||+|+.+++..
T Consensus       137 ~~~l~g~~vgIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~  207 (529)
T 1ygy_A          137 GTEIFGKTVGVVGLGRI-GQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKT  207 (529)
T ss_dssp             BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCS
T ss_pred             ccccCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCc
Confidence            45789999999999996 99999999999999999976421            4667889999999999754

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.93  E-value=0.0013  Score=51.61  Aligned_cols=58  Identities=22%  Similarity=0.298  Sum_probs=43.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------C------HHhh-hccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------D------PESI-VREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~------l~~~-~~~aDivisA~g  219 (229)
                      ....+++|+|+|.|. +|..++..|...|+.|+++.+...                +      +.+. +..+|+||.++|
T Consensus        15 ~~~~~~~v~IiG~G~-iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           15 KKQKSKYIVIFGCGR-LGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             --CCCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred             cccCCCcEEEECCCH-HHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence            356789999999988 599999999999999999865211                1      1111 567899999988


Q ss_pred             CC
Q 027064          220 QA  221 (229)
Q Consensus       220 ~p  221 (229)
                      .+
T Consensus        94 ~~   95 (155)
T 2g1u_A           94 DD   95 (155)
T ss_dssp             CH
T ss_pred             Cc
Confidence            64

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.89  E-value=0.0017  Score=56.19  Aligned_cols=52  Identities=25%  Similarity=0.326  Sum_probs=43.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------------------------------CCHHhhh
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------------------------------TDPESIV  208 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------------------------------~~l~~~~  208 (229)
                      ++|.|||.|.+ |.++|..|++.|++|+++++..                                       .++.+.+
T Consensus         5 ~kV~VIGaG~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~   83 (283)
T 4e12_A            5 TNVTVLGTGVL-GSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV   83 (283)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred             CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence            78999999995 9999999999999999997642                                       2334567


Q ss_pred             ccCcEEEEecCC
Q 027064          209 READIVIAAAGQ  220 (229)
Q Consensus       209 ~~aDivisA~g~  220 (229)
                      ++||+||.|++.
T Consensus        84 ~~aDlVi~av~~   95 (283)
T 4e12_A           84 KDADLVIEAVPE   95 (283)
T ss_dssp             TTCSEEEECCCS
T ss_pred             ccCCEEEEeccC
Confidence            899999999864

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.88  E-value=0.0011  Score=57.86  Aligned_cols=54  Identities=13%  Similarity=0.131  Sum_probs=45.7

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC---------------CCCHHhhhccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH---------------TTDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~---------------t~~l~~~~~~aDivisA~g~p  221 (229)
                      .++|.|||.|.+ |.+++..|.+.|.+|+++++.               +.++.+.++.||+||.+++.+
T Consensus         7 ~~~I~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~   75 (303)
T 3g0o_A            7 DFHVGIVGLGSM-GMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNA   75 (303)
T ss_dssp             CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSH
T ss_pred             CCeEEEECCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCH
Confidence            468999999995 999999999999999999774               234556778999999999864

>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*

Probab=96.87  E-value=0.06  Score=47.64  Aligned_cols=156  Identities=13%  Similarity=0.107  Sum_probs=105.8

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC------CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV------SEAELISKVHELNVMPDVHGILVQLPLPKHINEE  114 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~------~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~  114 (229)
                      .++.+...   .|..---+=..++.++|..+..+.-+...      +-.|-...+..+     +|+|.+--|-  +-..+
T Consensus        40 ~~~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~-----~D~iviR~~~--~~~~~  109 (299)
T 1pg5_A           40 TISIAFFE---PSTRTYLSFQKAIINLGGDVIGFSGEESTSVAKGENLADTIRMLNNY-----SDGIVMRHKY--DGASR  109 (299)
T ss_dssp             EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEEECC-------CCCHHHHHHHHHHH-----CSEEEEEESS--BTHHH
T ss_pred             EEEEEecC---CCcchHHhHHHHHHHhCCEEEEeCCCCcccccCCCCHHHHHHHHHHh-----CCEEEEeCCC--hhHHH
Confidence            45555543   46666667788999999998888644311      234444455554     5799998763  33334


Q ss_pred             HHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc--hhhhHHHHHHHhhC-C
Q 027064          115 KVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS--NIVGLPVSLLLLKA-D  191 (229)
Q Consensus       115 ~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s--~~VG~pla~~L~~~-~  191 (229)
                      .+.+..       ++--+|.|.      ...+.||-+.+=+--+++...+++|+++++||-+  +-|.+.++..|..- |
T Consensus       110 ~la~~~-------~vPVINaG~------g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g  176 (299)
T 1pg5_A          110 FASEIS-------DIPVINAGD------GKHEHPTQAVIDIYTINKHFNTIDGLVFALLGDLKYARTVNSLLRILTRFRP  176 (299)
T ss_dssp             HHHHHC-------SSCEEEEEE------TTTBCHHHHHHHHHHHHHHHSCSTTCEEEEEECCSSCHHHHHHHHHGGGSCC
T ss_pred             HHHHhC-------CCCEEeCCC------CCCcCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHhCCC
Confidence            444332       233455431      2456799888876666665568999999999996  45799999999999 9


Q ss_pred             CEEEEEcCCC------------------CCHHhhhccCcEEEEecC
Q 027064          192 ATVTIVHSHT------------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       192 atVtv~~~~t------------------~~l~~~~~~aDivisA~g  219 (229)
                      ++|++|.-.+                  .++.+.++.||+|.+-.-
T Consensus       177 ~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~  222 (299)
T 1pg5_A          177 KLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRI  222 (299)
T ss_dssp             SEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECC
T ss_pred             CEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCc
Confidence            9999984321                  356788999999987654

>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}

Probab=96.84  E-value=0.0019  Score=57.95  Aligned_cols=57  Identities=16%  Similarity=0.207  Sum_probs=49.4

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------CHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------DPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------~l~~~~~~aDivisA~g  219 (229)
                      +.++.||++-|||.|.+ |+.+|..+..-|++|..+++..+           ++.+.+++||||+..++
T Consensus       136 ~~~l~g~tvGIiG~G~I-G~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~P  203 (334)
T 3kb6_A          136 ARELNRLTLGVIGTGRI-GSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVP  203 (334)
T ss_dssp             BCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCC
T ss_pred             cceecCcEEEEECcchH-HHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCC
Confidence            35788999999999996 99999999999999998876432           57789999999998875

>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A

Probab=96.83  E-value=0.0051  Score=56.94  Aligned_cols=53  Identities=21%  Similarity=0.264  Sum_probs=45.2

Q ss_pred             CCcccCCHHHHHHHHH----HhCCC-CCCCeEEEEccchhhhHHHHHHHhh-CCCEEEEE
Q 027064          144 PLFLPCTPKGCLELLK----RSGVT-IKGKRAVVVGRSNIVGLPVSLLLLK-ADATVTIV  197 (229)
Q Consensus       144 ~~~~PcTa~av~~lL~----~~~~~-l~gk~v~ViG~s~~VG~pla~~L~~-~~atVtv~  197 (229)
                      ....++|++|++..++    +.+.+ ++||+|.|+|.|.+ |+.++.+|.. .|++|..+
T Consensus       184 ~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~V-G~~vA~~l~~~~G~kVv~~  242 (419)
T 1gtm_A          184 LGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNA-GYYLAKIMSEDFGMKVVAV  242 (419)
T ss_dssp             TTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHH-HHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHH-HHHHHHHHHHhcCCEEEEE
Confidence            3455799999887655    46888 99999999999995 9999999999 99998866

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=96.82  E-value=0.0011  Score=58.18  Aligned_cols=36  Identities=28%  Similarity=0.472  Sum_probs=32.5

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+++||+|+|||.|. ||...+..|+..||.|+++..
T Consensus         9 ~~l~~k~VLVVGgG~-va~rka~~Ll~~Ga~VtViap   44 (274)
T 1kyq_A            9 HQLKDKRILLIGGGE-VGLTRLYKLMPTGCKLTLVSP   44 (274)
T ss_dssp             ECCTTCEEEEEEESH-HHHHHHHHHGGGTCEEEEEEE
T ss_pred             EEcCCCEEEEECCcH-HHHHHHHHHHhCCCEEEEEcC
Confidence            468999999999999 599999999999999998743

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.82  E-value=0.00098  Score=57.50  Aligned_cols=53  Identities=23%  Similarity=0.342  Sum_probs=45.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ++|.|||.|.+ |.+++..|.+.|.+|+++++..              .++.+.+++||+||.+++.+
T Consensus         2 ~~I~iiG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~   68 (287)
T 3pdu_A            2 TTYGFLGLGIM-GGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADP   68 (287)
T ss_dssp             CCEEEECCSTT-HHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSH
T ss_pred             CeEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCH
Confidence            47999999995 9999999999999999998753              25667788999999999865

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.81  E-value=0.0015  Score=53.91  Aligned_cols=57  Identities=19%  Similarity=0.281  Sum_probs=46.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC---------------------CHHhhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT---------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~---------------------~l~~~~~~aDivisA~g~p  221 (229)
                      +.||+|+|.|+++-+|+.++..|+++|+  +|+++.+...                     ++.+.++..|+||.+.|..
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~   95 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   95 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence            4689999999988899999999999999  9998866431                     1224466789999998853

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.79  E-value=0.0023  Score=55.64  Aligned_cols=60  Identities=15%  Similarity=0.081  Sum_probs=45.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------CHHhhhccCcEEEEecCCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------DPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~l~~~~~~aDivisA~g~p~~  223 (229)
                      +..+|+|+|.|+++.+|+.++..|+++|++|+.+.+...               .+.+.+...|+||...|....
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~   90 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSW   90 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcccCc
Confidence            568999999999999999999999999999998876531               134667889999998875543

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.79  E-value=0.0015  Score=57.29  Aligned_cols=53  Identities=17%  Similarity=0.379  Sum_probs=43.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g~p  221 (229)
                      +||-+||-|.+ |.|+|..|++.|.+|+++++...              +..+..+.+|+||+..+.+
T Consensus         6 ~kIgfIGLG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~   72 (297)
T 4gbj_A            6 EKIAFLGLGNL-GTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADD   72 (297)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSH
T ss_pred             CcEEEEecHHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccch
Confidence            68999999996 99999999999999999987532              4668889999999988754

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.77  E-value=0.0017  Score=56.69  Aligned_cols=54  Identities=24%  Similarity=0.323  Sum_probs=45.8

Q ss_pred             CCeEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCC-CCHHhhhccCcEEEEecCCC
Q 027064          167 GKRAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHT-TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t-~~l~~~~~~aDivisA~g~p  221 (229)
                      .++|.||| .|.+ |..++..|.+.|..|+++++.. .+..+.++.||+||.|++.+
T Consensus        21 ~~~I~iIGg~G~m-G~~la~~l~~~G~~V~~~~~~~~~~~~~~~~~aDvVilavp~~   76 (298)
T 2pv7_A           21 IHKIVIVGGYGKL-GGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPIN   76 (298)
T ss_dssp             CCCEEEETTTSHH-HHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGG
T ss_pred             CCEEEEEcCCCHH-HHHHHHHHHhCCCeEEEEECCcccCHHHHhcCCCEEEEeCCHH
Confidence            47899999 8885 9999999999999999997653 35667889999999998743

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.77  E-value=0.00089  Score=62.73  Aligned_cols=58  Identities=22%  Similarity=0.281  Sum_probs=42.7

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCCCC----------------------CHHhhhccCcEEEEec
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSHTT----------------------DPESIVREADIVIAAA  218 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~t~----------------------~l~~~~~~aDivisA~  218 (229)
                      +.++.+++|+|+|+|. +|++++..|.+. ++.|+++++...                      ++.+.++.+|+||+++
T Consensus        18 ~~~l~~k~VlIiGAGg-iG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~t   96 (467)
T 2axq_A           18 EGRHMGKNVLLLGSGF-VAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLI   96 (467)
T ss_dssp             -----CEEEEEECCST-THHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred             ccCCCCCEEEEECChH-HHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECC
Confidence            4577899999999977 599999999988 679999977421                      1234567899999999


Q ss_pred             CC
Q 027064          219 GQ  220 (229)
Q Consensus       219 g~  220 (229)
                      |.
T Consensus        97 p~   98 (467)
T 2axq_A           97 PY   98 (467)
T ss_dssp             CG
T ss_pred             ch
Confidence            84

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.75  E-value=0.002  Score=56.04  Aligned_cols=52  Identities=15%  Similarity=0.222  Sum_probs=44.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g~p  221 (229)
                      ++|.|||.|.+ |.+++..|.+.|.+|+++++...              ++.+..+ ||+||.+++.|
T Consensus        16 ~~I~vIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~   81 (296)
T 3qha_A           16 LKLGYIGLGNM-GAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDD   81 (296)
T ss_dssp             CCEEEECCSTT-HHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSH
T ss_pred             CeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCCh
Confidence            68999999995 99999999999999999987532              4566777 99999999854

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.75  E-value=0.0022  Score=56.32  Aligned_cols=55  Identities=11%  Similarity=0.166  Sum_probs=46.7

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC----------------CCHHhhhccCcEEEEecCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT----------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t----------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      -++|.|||.|.+ |.+++..|.+.|. .|+++++..                .++.+.+++||+||.+++.+.
T Consensus        24 ~~~I~iIG~G~m-G~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~   95 (312)
T 3qsg_A           24 AMKLGFIGFGEA-ASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQA   95 (312)
T ss_dssp             -CEEEEECCSHH-HHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTT
T ss_pred             CCEEEEECccHH-HHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchh
Confidence            479999999996 9999999999999 999998841                256677899999999998664

>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}

Probab=96.74  E-value=0.033  Score=49.41  Aligned_cols=156  Identities=17%  Similarity=0.085  Sum_probs=107.7

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC--CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHh
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV--SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLG  118 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~  118 (229)
                      .++.+...   .|..---+=.-++.++|.++..+.-..+.  .-|-+.+.++-|+.-  +|+|.+--|-  +-..+.+.+
T Consensus        47 ~~~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~--~~~~~~la~  119 (301)
T 2ef0_A           47 VLALLFEK---PSLRTRTTLEVAMVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERF--VEGIAARVFR--HETVEALAR  119 (301)
T ss_dssp             EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEEEGGGSCTTTCCCHHHHHHHHTTT--CSEEEEECSS--HHHHHHHHH
T ss_pred             EEEEEecc---CCcchHHHHHHHHHHcCCeEEEECCcccccCCCCchHHHHHHHHHh--CCEEEEecCC--hHHHHHHHH
Confidence            45555532   56666667788999999998888632111  114577777777666  6899998663  222233333


Q ss_pred             cCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          119 EISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       119 ~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      ..       ++--+|.|       .....||=+.+=+--+++...+++|++|++||-++-|.+.++..|..-|++|++|.
T Consensus       120 ~~-------~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~  185 (301)
T 2ef0_A          120 HA-------KVPVVNAL-------SDRAHPLQALADLLTLKEVFGGLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVAT  185 (301)
T ss_dssp             HC-------SSCEEEEE-------CSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEEC
T ss_pred             HC-------CCCEEeCC-------CCccCchHHHHHHHHHHHHhCCcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEEC
Confidence            22       23445643       23567998888766666655589999999999977789999999999999999985


Q ss_pred             CCC----------------CCHHhhhccCcEEEEe
Q 027064          199 SHT----------------TDPESIVREADIVIAA  217 (229)
Q Consensus       199 ~~t----------------~~l~~~~~~aDivisA  217 (229)
                      -.+                .++.+.++.||+|..-
T Consensus       186 P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~  220 (301)
T 2ef0_A          186 PKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTD  220 (301)
T ss_dssp             CTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEEC
T ss_pred             CchhcCCHHHHhhceeEEECCHHHHhcCCCEEEec
Confidence            533                3566889999999874

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=96.74  E-value=0.0013  Score=61.28  Aligned_cols=58  Identities=22%  Similarity=0.319  Sum_probs=46.9

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-CCH-----------------HhhhccCcEEEEecCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-TDP-----------------ESIVREADIVIAAAGQA  221 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~~l-----------------~~~~~~aDivisA~g~p  221 (229)
                      .+++||+|+|||.|. +|...+.+|++.||.|+++.... ..+                 .+.+..+|+||.|||.|
T Consensus         8 ~~l~~~~vlVvGgG~-va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~   83 (457)
T 1pjq_A            8 CQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDD   83 (457)
T ss_dssp             ECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCH
T ss_pred             EECCCCEEEEECCCH-HHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCH
Confidence            468899999999999 59999999999999999986532 111                 13456789999999976

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=96.74  E-value=0.0017  Score=57.99  Aligned_cols=55  Identities=24%  Similarity=0.349  Sum_probs=45.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g~  220 (229)
                      +++++|.|||.|.+ |..++..|.+.|..|+++++...              ++.+.+++||+||.|++.
T Consensus        14 l~~~~I~IIG~G~m-G~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~   82 (338)
T 1np3_A           14 IQGKKVAIIGYGSQ-GHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPD   82 (338)
T ss_dssp             HHTSCEEEECCSHH-HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCH
T ss_pred             hcCCEEEEECchHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCc
Confidence            45789999999996 99999999999999998877532              344668899999999863

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.73  E-value=0.0021  Score=51.90  Aligned_cols=54  Identities=17%  Similarity=0.181  Sum_probs=43.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHH----hhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPE----SIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~----~~~~~aDivisA~g~p  221 (229)
                      .+|+|.|+++.+|+.++..|+++|++|+++.+...              |+.    +.+...|+||.++|.+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~   72 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGIS   72 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence            37999999888999999999999999999876532              111    4567889999999875

>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*

Probab=96.73  E-value=0.00046  Score=63.57  Aligned_cols=64  Identities=20%  Similarity=0.179  Sum_probs=51.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC---CCHHhhhccCcEEEEecC----CCCCCCCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT---TDPESIVREADIVIAAAG----QAMMVTMGIL  229 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t---~~l~~~~~~aDivisA~g----~p~~i~~~~v  229 (229)
                      ..-+|+|||.++.||+.++.++...||   .|++.+...   ....+.++++||||+++-    .|.||+.||+
T Consensus       213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~~~i~~aDivIn~vlig~~aP~Lvt~e~v  286 (394)
T 2qrj_A          213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPFDEIPQADIFINCIYLSKPIAPFTNMEKL  286 (394)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCCTHHHHSSEEEECCCCCSSCCCSCCHHHH
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCchhhHhhCCEEEECcCcCCCCCcccCHHHH
Confidence            467999999956689999999999998   899997642   122256889999999987    4899987763

>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}

Probab=96.73  E-value=0.099  Score=46.45  Aligned_cols=156  Identities=15%  Similarity=0.121  Sum_probs=103.8

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCC---HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVS---EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVL  117 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~---~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~  117 (229)
                      .++.+...   .|..---+=..++.++|.++..+.- .+.+   -|-+.+.++-|+.-  +|+|.+--|-  +-..+++.
T Consensus        38 ~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvls~~--~D~iviR~~~--~~~~~~lA  109 (307)
T 3tpf_A           38 TLAMIFEK---NSTRTRMAFELAITELGGKALFLSS-NDLQLSRGEPVKDTARVIGAM--VDFVMMRVNK--HETLLEFA  109 (307)
T ss_dssp             EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECT-TTCCTTTSSCHHHHHHHHHHH--SSEEEEECSC--HHHHHHHH
T ss_pred             EEEEEecC---CCcchHHhHHHHHHHcCCeEEEcCc-ccccCCCCCCHHHHHHHHHHh--CCEEEEecCC--hHHHHHHH
Confidence            45555533   4666666677889999999888752 2211   13444555444443  6899998663  22222333


Q ss_pred             hcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC-CCeEEEEccchhhhHHHHHHHhhCCCEEEE
Q 027064          118 GEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK-GKRAVVVGRSNIVGLPVSLLLLKADATVTI  196 (229)
Q Consensus       118 ~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~-gk~v~ViG~s~~VG~pla~~L~~~~atVtv  196 (229)
                      +..       ++--+|.|       .....||=+.+=+--+++...+++ |++|++||-+.-|.+.++..|..-|++|++
T Consensus       110 ~~~-------~vPVINag-------~~~~HPtQaLaDl~Ti~e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~  175 (307)
T 3tpf_A          110 RYS-------KAPVINAL-------SELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISI  175 (307)
T ss_dssp             HHC-------SSCEEEEE-------CSSCCHHHHHHHHHHHHHTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEE
T ss_pred             HhC-------CCCEEeCC-------CCCcCcHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEE
Confidence            222       23345653       125679988886655555555899 999999999999999999999999999998


Q ss_pred             EcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          197 VHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       197 ~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      |.-.+                         .++.+.++.||+|.+-+
T Consensus       176 ~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~  222 (307)
T 3tpf_A          176 AMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDT  222 (307)
T ss_dssp             ECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred             ECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecC
Confidence            85432                         24557789999998754

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=96.72  E-value=0.0056  Score=54.34  Aligned_cols=62  Identities=18%  Similarity=0.193  Sum_probs=47.9

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhh-CCC-EEEEEcCCCC-------------------CHHhhhccCcEEEEecCCCCC-
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLK-ADA-TVTIVHSHTT-------------------DPESIVREADIVIAAAGQAMM-  223 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~-~~a-tVtv~~~~t~-------------------~l~~~~~~aDivisA~g~p~~-  223 (229)
                      ..++++|||.|.+ |+..+..|.. ++. +|+++++. +                   ++.+.+++|||||+||+.+.. 
T Consensus       120 ~~~~v~iIGaG~~-a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~~pv  197 (313)
T 3hdj_A          120 RSSVLGLFGAGTQ-GAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRSTTPL  197 (313)
T ss_dssp             TCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCSSCS
T ss_pred             CCcEEEEECccHH-HHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCCCcc
Confidence            5799999999996 9999988875 344 79999886 3                   334557789999999997655 


Q ss_pred             CCCCCC
Q 027064          224 VTMGIL  229 (229)
Q Consensus       224 i~~~~v  229 (229)
                      +..+|+
T Consensus       198 l~~~~l  203 (313)
T 3hdj_A          198 FAGQAL  203 (313)
T ss_dssp             SCGGGC
T ss_pred             cCHHHc
Confidence            455553

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.72  E-value=0.0022  Score=52.30  Aligned_cols=54  Identities=31%  Similarity=0.364  Sum_probs=44.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------C------HHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------D------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~------l~~~~~~aDivisA~g~p  221 (229)
                      ++|+|.|+++.+|+.++..|+++|++|+++.+...              |      +.+.++..|+||.++|..
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~   78 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG   78 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence            78999999999999999999999999999876421              1      335677899999998753

>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A

Probab=96.71  E-value=0.0066  Score=56.65  Aligned_cols=53  Identities=21%  Similarity=0.309  Sum_probs=44.9

Q ss_pred             cccCCHHHHHHH----HHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcC
Q 027064          146 FLPCTPKGCLEL----LKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~l----L~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~  199 (229)
                      ..+.|.+|++..    +++.+.+++||+|+|.|.|+ ||..++.+|.+.|++|+ ++++
T Consensus       210 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGn-VG~~~a~~L~e~GakvVavsD~  267 (440)
T 3aog_A          210 RRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGN-VGNAAARAFHDHGARVVAVQDH  267 (440)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEECS
T ss_pred             CCcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCH-HHHHHHHHHHHCCCEEEEEEcC
Confidence            447899988765    45578899999999999999 59999999999999866 7766

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.71  E-value=0.004  Score=54.10  Aligned_cols=60  Identities=13%  Similarity=0.147  Sum_probs=47.9

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------C------HHhhhc--cCcEEEEe
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------D------PESIVR--EADIVIAA  217 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------~------l~~~~~--~aDivisA  217 (229)
                      .+++|++|+|.|+++.+|+.++..|+++|++|+++.+...                 |      +.+.++  ..|+||.+
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~   95 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHS   95 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence            3578999999999999999999999999999998866311                 1      224455  78999999


Q ss_pred             cCCCC
Q 027064          218 AGQAM  222 (229)
Q Consensus       218 ~g~p~  222 (229)
                      +|...
T Consensus        96 A~~~~  100 (330)
T 2pzm_A           96 AAAYK  100 (330)
T ss_dssp             CCCCS
T ss_pred             CccCC
Confidence            88653

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.70  E-value=0.0036  Score=53.43  Aligned_cols=60  Identities=20%  Similarity=0.277  Sum_probs=46.7

Q ss_pred             CCCCCeEEEEcc----------------chhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHH-------hh
Q 027064          164 TIKGKRAVVVGR----------------SNIVGLPVSLLLLKADATVTIVHSHTT-------------DPE-------SI  207 (229)
Q Consensus       164 ~l~gk~v~ViG~----------------s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~-------~~  207 (229)
                      ++.||+|+|-|.                |+-.|..+|..|..+||.|+++++.+.             +..       +.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~~~g~~~~dv~~~~~~~~~v~~~   84 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNAS   84 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccccCCCCeEEccCcHHHHHHHHHHh
Confidence            478999999999                354699999999999999999866431             111       23


Q ss_pred             hccCcEEEEecCCCCC
Q 027064          208 VREADIVIAAAGQAMM  223 (229)
Q Consensus       208 ~~~aDivisA~g~p~~  223 (229)
                      ....|++|.+.|...|
T Consensus        85 ~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           85 VQQQNIFIGCAAVADY  100 (226)
T ss_dssp             GGGCSEEEECCBCCSE
T ss_pred             cCCCCEEEECCcccCC
Confidence            4578999999997655

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.70  E-value=0.0014  Score=50.14  Aligned_cols=54  Identities=19%  Similarity=0.212  Sum_probs=41.3

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------------CH---Hh-hhccCcEEEEecCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------------DP---ES-IVREADIVIAAAGQ  220 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------------~l---~~-~~~~aDivisA~g~  220 (229)
                      .+++++|+|.|. +|+.++..|.++|+.|+++.+...                  +.   .+ .+.++|+||.++|.
T Consensus         5 ~~~~v~I~G~G~-iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            5 GRYEYIVIGSEA-AGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             -CCSEEEECCSH-HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence            468999999988 599999999999999999866321                  11   11 14578999999883

>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1

Probab=96.70  E-value=0.029  Score=49.92  Aligned_cols=158  Identities=14%  Similarity=0.089  Sum_probs=110.3

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVL  117 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~  117 (229)
                      .++.+...   .|..---+=..++.++|.++..+.-..+.   .-|-+.+.++-|+.-  +|+|.+--|  .+-..+++.
T Consensus        46 ~l~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~--~D~iviR~~--~~~~~~~la  118 (308)
T 1ml4_A           46 ILATLFFE---PSTRTRLSFESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQY--CDVIVIRHP--KEGAARLAA  118 (308)
T ss_dssp             EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEESCGGGSGGGGTCCHHHHHHHHTTT--CSEEEEEES--STTHHHHHH
T ss_pred             EEEEEecC---CCchHHHHHHHHHHHhCCeEEEeCCCccccccCCCCHHHHHHHHHHh--CcEEEEecC--ChhHHHHHH
Confidence            55655543   46666667788999999998887643211   125677777777766  689999876  333334444


Q ss_pred             hcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEE
Q 027064          118 GEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS--NIVGLPVSLLLLKADATVT  195 (229)
Q Consensus       118 ~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVt  195 (229)
                      +..       ++--+|.|-   |   ..+.||=+.+=+--+++...+++|++|++||-+  +-|.+.++..|..-|++|+
T Consensus       119 ~~~-------~vPVINag~---g---~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~  185 (308)
T 1ml4_A          119 EVA-------EVPVINAGD---G---SNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELY  185 (308)
T ss_dssp             HTC-------SSCEEEEEE---T---TSCCHHHHHHHHHHHHHHSSCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEE
T ss_pred             HhC-------CCCEEeCcc---C---CccCcHHHHHHHHHHHHHhCCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEE
Confidence            432       133455431   1   356799888877777777668999999999996  3479999999999999999


Q ss_pred             EEcCCC---------------------CCHHhhhccCcEEEEec
Q 027064          196 IVHSHT---------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       196 v~~~~t---------------------~~l~~~~~~aDivisA~  218 (229)
                      +|.-.+                     .++.+.++.||+|.+-.
T Consensus       186 ~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~  229 (308)
T 1ml4_A          186 LISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTR  229 (308)
T ss_dssp             EECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECC
T ss_pred             EECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECC
Confidence            985422                     35667899999998754

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.69  E-value=0.0048  Score=51.58  Aligned_cols=38  Identities=24%  Similarity=0.370  Sum_probs=34.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+..
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~   46 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPN   46 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence            57899999999999999999999999999999887653

>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}

Probab=96.69  E-value=0.068  Score=48.43  Aligned_cols=157  Identities=16%  Similarity=0.190  Sum_probs=103.8

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC--CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHh
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV--SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLG  118 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~  118 (229)
                      .++.+..-   .|..---+=..++.++|..+..+.....-  .-|-+.+.++-|..-  +|+|++--|  .|-..+++.+
T Consensus        68 ~va~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~~~s~l~kgEsl~DTarvLs~~--~D~IviR~~--~~~~~~~lA~  140 (353)
T 3sds_A           68 TVAMMFSK---RSTRTRVSTEGAVVKMGGHPMFLGKDDIQLGVNESLYDTSVVISSM--VSCIVARVG--PHSDIANLAK  140 (353)
T ss_dssp             EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECTTTC--CCSSCHHHHHHHHHTS--CSEEEEECS--SHHHHHHHHH
T ss_pred             EEEEEecC---CchhHHHHHHHHHHHcCCeEEecCCccccccCCccHHHHHHHHHHh--cCEEEEEeC--ChHHHHHHHh
Confidence            55555543   46666666778899999998776432210  115566666666655  789998755  3222233333


Q ss_pred             cCCccCcccccCccchhhhhccCCCCCcccCCHHHHH-HHHHHhCC------------CCCCCeEEEEccchhhhHHHHH
Q 027064          119 EISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCL-ELLKRSGV------------TIKGKRAVVVGRSNIVGLPVSL  185 (229)
Q Consensus       119 ~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~-~lL~~~~~------------~l~gk~v~ViG~s~~VG~pla~  185 (229)
                      ..       ++--+|.|       ...+.||=+.+=+ .+.|+.|-            .++|++|++||-+..|.+.++.
T Consensus       141 ~s-------~vPVINag-------~d~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~  206 (353)
T 3sds_A          141 HS-------SVPVINAL-------CDTFHPLQAIADFLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAI  206 (353)
T ss_dssp             HC-------SSCEEEEE-------CSSCCHHHHHHHHHHHHHHTC--------CTTCCSCTTCEEEEESCCCHHHHHHHH
T ss_pred             hC-------CCCEEECC-------CCCCCcHHHHHHHHHHHHHhCCCcccccccccccccCCCEEEEECCCchHHHHHHH
Confidence            22       23345653       1246799888844 55555552            1499999999999999999999


Q ss_pred             HHhhCCCEEEEEcCCC---------------------------CCHHhhhccCcEEEEec
Q 027064          186 LLLKADATVTIVHSHT---------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       186 ~L~~~~atVtv~~~~t---------------------------~~l~~~~~~aDivisA~  218 (229)
                      .|..-|++|++|.-.+                           .++.+.++.||+|.+-+
T Consensus       207 ~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~  266 (353)
T 3sds_A          207 AATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDT  266 (353)
T ss_dssp             HHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECC
T ss_pred             HHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCC
Confidence            9999999999884322                           25667889999998743

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.68  E-value=0.0051  Score=51.73  Aligned_cols=61  Identities=28%  Similarity=0.390  Sum_probs=46.7

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------CCHHhhh---ccCcEEEEecCCCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------TDPESIV---READIVIAAAGQAM  222 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------~~l~~~~---~~aDivisA~g~p~  222 (229)
                      ..+++||+++|.|++.-+|+.++..|+++|++|+++.+..                .+.....   ...|+||...|...
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~~~   93 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPK   93 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence            3468999999999999999999999999999999886642                1222222   26799999988543

>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A

Probab=96.67  E-value=0.21  Score=44.22  Aligned_cols=157  Identities=15%  Similarity=0.096  Sum_probs=104.1

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCC-----CCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLP-----EQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEK  115 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~-----~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~  115 (229)
                      .++.+...   .|..---+=..++.++|..+..+.-.     ..-+-.|-...+..+.    +|+|.+--|  .+-..+.
T Consensus        38 ~la~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~----~D~iviR~~--~~~~~~~  108 (304)
T 3r7f_A           38 FAANLFFE---PSTRTRFSFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRTLESIG----VDVCVIRHS--EDEYYEE  108 (304)
T ss_dssp             EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEEETTSTTSCSSSCHHHHHHHHHHHT----CCEEEEECS--STTCHHH
T ss_pred             EEEEEecC---CChhHHHhHHHHHHHCCCeEEEECcccccCCCCCCHHHHHHHHHHhc----CCEEEEecC--ChhHHHH
Confidence            44554432   45555556778899999998887422     1122345555555553    579999877  3334455


Q ss_pred             HHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc--hhhhHHHHHHHhhCCCE
Q 027064          116 VLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS--NIVGLPVSLLLLKADAT  193 (229)
Q Consensus       116 i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s--~~VG~pla~~L~~~~at  193 (229)
                      +.+..       ++--+|.|     + ...+.||=+.+=+--+++...+++|++|++||-+  +-|.+.++..|..-|++
T Consensus       109 la~~~-------~vPVINag-----d-g~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~  175 (304)
T 3r7f_A          109 LVSQV-------NIPILNAG-----D-GCGQHPTQSLLDLMTIYEEFNTFKGLTVSIHGDIKHSRVARSNAEVLTRLGAR  175 (304)
T ss_dssp             HHHHC-------SSCEEESC-----C-TTSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCE
T ss_pred             HHHhC-------CCCEEeCC-----C-CCCcCcHHHHHHHHHHHHHhCCCCCCEEEEEcCCCCcchHHHHHHHHHHcCCE
Confidence            54432       12344542     1 2456799888865555544447999999999986  34799999999999999


Q ss_pred             EEEEcCC-----------CCCHHhhhccCcEEEEecC
Q 027064          194 VTIVHSH-----------TTDPESIVREADIVIAAAG  219 (229)
Q Consensus       194 Vtv~~~~-----------t~~l~~~~~~aDivisA~g  219 (229)
                      |++|.-.           +.++.+.++.||+|.+-..
T Consensus       176 v~~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt~~~  212 (304)
T 3r7f_A          176 VLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRI  212 (304)
T ss_dssp             EEEESCGGGSCTTCSSCEECCHHHHHHHCSEEEECCC
T ss_pred             EEEECCCccCcchhhcCccCCHHHHhCCCCEEEeccc
Confidence            9998432           2477889999999988643

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.65  E-value=0.0031  Score=57.02  Aligned_cols=56  Identities=13%  Similarity=0.141  Sum_probs=46.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccC---cEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREA---DIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~a---DivisA~g~p  221 (229)
                      +++++|.|||.|.+ |.+++..|.+.|.+|+++++..              .++.+.++.+   |+||.+++.+
T Consensus        20 m~~mkIgiIGlG~m-G~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~   92 (358)
T 4e21_A           20 FQSMQIGMIGLGRM-GADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA   92 (358)
T ss_dssp             --CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG
T ss_pred             hcCCEEEEECchHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH
Confidence            45789999999995 9999999999999999998742              3667778888   9999998765

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.65  E-value=0.0019  Score=57.04  Aligned_cols=54  Identities=15%  Similarity=0.080  Sum_probs=45.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCC-------------------C-CHHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHT-------------------T-DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t-------------------~-~l~~~~~~aDivisA~g~p~  222 (229)
                      ++|.|||.|.+ |.+++..|.+.| .+|+++++..                   . ++.+.+++||+||.+++.+.
T Consensus        25 m~IgvIG~G~m-G~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~~~~s~~e~~~~aDvVi~avp~~~   99 (317)
T 4ezb_A           25 TTIAFIGFGEA-AQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGVEPLDDVAGIACADVVLSLVVGAA   99 (317)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTCEEESSGGGGGGCSEEEECCCGGG
T ss_pred             CeEEEECccHH-HHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCCCCCCHHHHHhcCCEEEEecCCHH
Confidence            68999999995 999999999999 8999998753                   1 55677889999999987653

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=96.63  E-value=0.0028  Score=55.87  Aligned_cols=53  Identities=21%  Similarity=0.343  Sum_probs=43.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------------CCHHhhhccCcEEEEecCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------------~~l~~~~~~aDivisA~g~p  221 (229)
                      .-|+|.|||.|.+ |.++|..|+ .|..|++.++..                     .++.+ +++||+||.|+...
T Consensus        11 ~~~~V~vIG~G~M-G~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~   84 (293)
T 1zej_A           11 HHMKVFVIGAGLM-GRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFED   84 (293)
T ss_dssp             -CCEEEEECCSHH-HHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSC
T ss_pred             CCCeEEEEeeCHH-HHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCC
Confidence            3599999999996 999999999 999999998742                     23333 78899999998743

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.62  E-value=0.0033  Score=54.06  Aligned_cols=54  Identities=20%  Similarity=0.316  Sum_probs=45.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      .+|.|||.|.+ |..++..|.+.|..|+++++..              .+..+.+.++|+||.+++.|.
T Consensus         5 ~~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~   72 (301)
T 3cky_A            5 IKIGFIGLGAM-GKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAG   72 (301)
T ss_dssp             CEEEEECCCTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHH
T ss_pred             CEEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHH
Confidence            68999999995 9999999999999999987632              245567888999999998654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.61  E-value=0.0045  Score=53.40  Aligned_cols=59  Identities=20%  Similarity=0.356  Sum_probs=46.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------C-------------HHhhhccCcEEEEec
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------D-------------PESIVREADIVIAAA  218 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------~-------------l~~~~~~aDivisA~  218 (229)
                      .+|+||.++|-|+|.=+|+.++..|.++||+|.++.+...           |             ..+..-.-|++|+..
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnA   86 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHML   86 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECC
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            3689999999999998999999999999999999977432           1             112233469999988


Q ss_pred             CCC
Q 027064          219 GQA  221 (229)
Q Consensus       219 g~p  221 (229)
                      |..
T Consensus        87 G~~   89 (261)
T 4h15_A           87 GGS   89 (261)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            853

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=96.61  E-value=0.0021  Score=55.20  Aligned_cols=52  Identities=21%  Similarity=0.351  Sum_probs=44.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      +|.|||.|.+ |.+++..|.+.|..|+++++..              .+..+.++++|+||.+++.|
T Consensus         2 ~i~iiG~G~m-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~   67 (296)
T 2gf2_A            2 PVGFIGLGNM-GNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTS   67 (296)
T ss_dssp             CEEEECCSTT-HHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSH
T ss_pred             eEEEEeccHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCH
Confidence            6899999996 9999999999999999997642              24556788999999999765

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.61  E-value=0.0032  Score=58.19  Aligned_cols=58  Identities=24%  Similarity=0.285  Sum_probs=46.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------CHH-------------hhhcc-CcEEEEecCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------DPE-------------SIVRE-ADIVIAAAGQAM  222 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------~l~-------------~~~~~-aDivisA~g~p~  222 (229)
                      ++.||+|.|||.|.. |.++|.+|.++|+.|++++.+..       .|.             +.+.. +|.||.+.|.|.
T Consensus         6 ~~~~k~v~viG~G~s-G~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~   84 (451)
T 3lk7_A            6 TFENKKVLVLGLARS-GEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPY   84 (451)
T ss_dssp             TTTTCEEEEECCTTT-HHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCT
T ss_pred             hcCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCC
Confidence            468999999999996 99999999999999999987531       111             23355 899999888763

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.61  E-value=0.0043  Score=53.97  Aligned_cols=70  Identities=20%  Similarity=0.227  Sum_probs=52.4

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------------------
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------------------  202 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------------------  202 (229)
                      .|.++.-+..-.     .+.+++|+|.|+++.+|+.++..|+++|++|+.+.+...                        
T Consensus        10 ~~~~~~~~~~~~-----~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (351)
T 3ruf_A           10 YMSRYEEITQQL-----IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFI   84 (351)
T ss_dssp             CCHHHHHHHHHH-----HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEE
T ss_pred             HHHHHhhHHhhC-----CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEE
Confidence            355555554432     246899999999999999999999999999999876321                        


Q ss_pred             --C------HHhhhccCcEEEEecCCC
Q 027064          203 --D------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       203 --~------l~~~~~~aDivisA~g~p  221 (229)
                        |      +.+.++..|+||.++|..
T Consensus        85 ~~Dl~d~~~~~~~~~~~d~Vih~A~~~  111 (351)
T 3ruf_A           85 EGDIRDLTTCEQVMKGVDHVLHQAALG  111 (351)
T ss_dssp             ECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred             EccCCCHHHHHHHhcCCCEEEECCccC
Confidence              1      235566889999998854

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.59  E-value=0.0011  Score=56.81  Aligned_cols=37  Identities=27%  Similarity=0.446  Sum_probs=32.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t  201 (229)
                      .+++++|+|||.|++ |.+++..|...|. ++++++...
T Consensus        28 ~l~~~~VlVvG~Gg~-G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           28 ALKDSRVLIVGLGGL-GCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HHHHCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHhCCeEEEEeeCHH-HHHHHHHHHHcCCCeEEEEcCCC
Confidence            356799999999995 9999999999998 899987654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.58  E-value=0.0014  Score=52.59  Aligned_cols=58  Identities=14%  Similarity=0.122  Sum_probs=44.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCCCC------------------C---HHhh--hccCcEEEEec
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSHTT------------------D---PESI--VREADIVIAAA  218 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~t~------------------~---l~~~--~~~aDivisA~  218 (229)
                      .++.+.+++|+|.|. +|..++..|.+. |+.|+++++...                  +   +.+.  +..+|+||.++
T Consensus        35 ~~~~~~~v~IiG~G~-~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~  113 (183)
T 3c85_A           35 INPGHAQVLILGMGR-IGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM  113 (183)
T ss_dssp             BCCTTCSEEEECCSH-HHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred             cCCCCCcEEEECCCH-HHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence            456788999999988 599999999998 999998865311                  1   2222  56789999988


Q ss_pred             CCC
Q 027064          219 GQA  221 (229)
Q Consensus       219 g~p  221 (229)
                      +.+
T Consensus       114 ~~~  116 (183)
T 3c85_A          114 PHH  116 (183)
T ss_dssp             SSH
T ss_pred             CCh
Confidence            753

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.58  E-value=0.0034  Score=55.49  Aligned_cols=54  Identities=13%  Similarity=0.073  Sum_probs=45.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC----------------CCHHh-hhccCcEEEEecCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT----------------TDPES-IVREADIVIAAAGQ  220 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t----------------~~l~~-~~~~aDivisA~g~  220 (229)
                      ..++|.|||.|.+ |.+++..|.+.|.  +|+++++..                .++.+ .+++||+||.|++.
T Consensus        32 ~~~kI~IIG~G~m-G~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~  104 (314)
T 3ggo_A           32 SMQNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPV  104 (314)
T ss_dssp             SCSEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCG
T ss_pred             CCCEEEEEeeCHH-HHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCH
Confidence            3489999999996 9999999999999  999997642                24556 78899999999874

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.58  E-value=0.0023  Score=56.36  Aligned_cols=52  Identities=25%  Similarity=0.379  Sum_probs=45.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~  220 (229)
                      |+|-+||-|.+ |.|+|..|++.|.+|++.|++.              .+..+..+.+|+||+..+.
T Consensus         4 ~kIgfIGlG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~   69 (300)
T 3obb_A            4 KQIAFIGLGHM-GAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPA   69 (300)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSC
T ss_pred             CEEEEeeehHH-HHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCc
Confidence            68999999996 9999999999999999998853              2566888999999998764

>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}

Probab=96.58  E-value=0.081  Score=47.69  Aligned_cols=186  Identities=17%  Similarity=0.159  Sum_probs=112.4

Q ss_pred             hcccHHHHHHHHHHHHHHHHHHHhcCC---CC-CeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCC---HH
Q 027064           11 IIDGKAVAQTIRSEIAEEVRLLSEKYG---KV-PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVS---EA   83 (229)
Q Consensus        11 il~G~~la~~i~~~i~~~~~~l~~~~~---~~-P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~---~~   83 (229)
                      +|+-..+.++=.+.+-+....+++...   .+ ..++.+...   .|..---+=..++.++|..+..+.-. +.+   -|
T Consensus        38 lLsi~dls~~ei~~ll~~A~~lk~~~~~~~L~gK~la~lF~e---pSTRTR~SFE~A~~~LGg~vi~l~~~-~ss~~kgE  113 (340)
T 4ep1_A           38 LLTLEELTQEEIISLIEFAIYLKKNKQEPLLQGKILGLIFDK---HSTRTRVSFEAGMVQLGGHGMFLNGK-EMQMGRGE  113 (340)
T ss_dssp             BSSGGGSCHHHHHHHHHHHHHHHHSCCCCTTTTCEEEEEESS---CCHHHHHHHHHHHHHTTCEEEEEESC-C------C
T ss_pred             ccchhhCCHHHHHHHHHHHHHHHhcccccccCCceEEEEecC---CCccHHHHHHHHHHHcCCeEEEcCcc-cccCCCCC
Confidence            444444444333344444455554311   12 345555533   46666666778899999999877522 211   12


Q ss_pred             HHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCC
Q 027064           84 ELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGV  163 (229)
Q Consensus        84 el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~  163 (229)
                      -+.+.++-|+.-  +|+|.+--|-  +-..+++.+..       ++--+|.|       ....-||=+.+=+--+++...
T Consensus       114 sl~DTarvLs~y--~D~IviR~~~--~~~~~~lA~~~-------~vPVINag-------~~~~HPtQaLaDl~TI~E~~G  175 (340)
T 4ep1_A          114 TVSDTAKVLSHY--IDGIMIRTFS--HADVEELAKES-------SIPVINGL-------TDDHHPCQALADLMTIYEETN  175 (340)
T ss_dssp             CTTHHHHHHHHH--CSEEEEECSC--HHHHHHHHHHC-------SSCEEEEE-------CSSCCHHHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHh--CCEEEEecCC--hhHHHHHHHhC-------CCCEEeCC-------CCCCCcHHHHHHHHHHHHHhC
Confidence            344444444333  6899998663  22223333322       23345643       125679988885544444444


Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      .++|++|++||-+.-|.+.++..|..-|++|++|.-.+                         .++.+.++.||+|..-.
T Consensus       176 ~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~  255 (340)
T 4ep1_A          176 TFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDV  255 (340)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecC
Confidence            69999999999998899999999999999999885432                         24567789999998643

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.56  E-value=0.0023  Score=53.15  Aligned_cols=57  Identities=16%  Similarity=0.147  Sum_probs=45.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC---------------------CHHhhhccCcEEEEecCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT---------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      ..|+|+|.|+++-+|+.++..|+++| ++|+++.+...                     ++.+.++..|+||.+.|.+.
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~  100 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED  100 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence            35899999998889999999999999 89998866421                     13356778899998887643

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=96.56  E-value=0.0044  Score=53.13  Aligned_cols=58  Identities=14%  Similarity=0.235  Sum_probs=46.4

Q ss_pred             CCCeEEEEcc----------------chhhhHHHHHHHhhCCCEEEEEcCCCC---------------C-------HHhh
Q 027064          166 KGKRAVVVGR----------------SNIVGLPVSLLLLKADATVTIVHSHTT---------------D-------PESI  207 (229)
Q Consensus       166 ~gk~v~ViG~----------------s~~VG~pla~~L~~~~atVtv~~~~t~---------------~-------l~~~  207 (229)
                      +||+|+|-|.                |+-.|..+|..|..+||.|+++++.+.               .       +.+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~   81 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQER   81 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHh
Confidence            5899999999                676799999999999999999987532               0       1133


Q ss_pred             hccCcEEEEecCCCCC
Q 027064          208 VREADIVIAAAGQAMM  223 (229)
Q Consensus       208 ~~~aDivisA~g~p~~  223 (229)
                      ...+|++|.+.+...|
T Consensus        82 ~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           82 VQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             GGGCSEEEECSBCCSE
T ss_pred             cCCCCEEEEcCccccc
Confidence            5679999999997766

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.56  E-value=0.002  Score=53.55  Aligned_cols=53  Identities=11%  Similarity=0.197  Sum_probs=43.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g~  220 (229)
                      ++++.|||.|.+ |..++..|.+.|..|+++++...             ++.+.++++|+||.+++.
T Consensus        28 ~~~I~iiG~G~~-G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~   93 (215)
T 2vns_A           28 APKVGILGSGDF-ARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFR   93 (215)
T ss_dssp             -CCEEEECCSHH-HHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCG
T ss_pred             CCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCCh
Confidence            478999998885 99999999999999999876421             344667889999999984

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.56  E-value=0.0076  Score=53.19  Aligned_cols=74  Identities=22%  Similarity=0.251  Sum_probs=54.0

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHh---------------hhccC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPES---------------IVREA  211 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~---------------~~~~a  211 (229)
                      +||....++..|++.++ -.|.+|+|+|+|. ||..+++++...|++|+.+.+....++.               ..+..
T Consensus       158 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~  235 (348)
T 3two_A          158 LLCAGITTYSPLKFSKV-TKGTKVGVAGFGG-LGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEEL  235 (348)
T ss_dssp             GGTHHHHHHHHHHHTTC-CTTCEEEEESCSH-HHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCE
T ss_pred             hhhhHHHHHHHHHhcCC-CCCCEEEEECCcH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCC
Confidence            56766666777776643 3699999999976 6999999999999999887654433221               11146


Q ss_pred             cEEEEecCCCC
Q 027064          212 DIVIAAAGQAM  222 (229)
Q Consensus       212 DivisA~g~p~  222 (229)
                      |+||.++|.+.
T Consensus       236 D~vid~~g~~~  246 (348)
T 3two_A          236 DFIISTIPTHY  246 (348)
T ss_dssp             EEEEECCCSCC
T ss_pred             CEEEECCCcHH
Confidence            89999999873

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.55  E-value=0.0027  Score=47.73  Aligned_cols=54  Identities=19%  Similarity=0.361  Sum_probs=40.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------------CHH----hhhccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------------DPE----SIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------------~l~----~~~~~aDivisA~g~p  221 (229)
                      +++++|+|.|. +|..++..|.+.|..|+++.+...                   +..    ..+.++|+||.+++.+
T Consensus         4 ~m~i~IiG~G~-iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   80 (140)
T 1lss_A            4 GMYIIIAGIGR-VGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE   80 (140)
T ss_dssp             -CEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             CCEEEEECCCH-HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence            57899999988 599999999999999999865321                   110    1156789999998753

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.54  E-value=0.0021  Score=54.21  Aligned_cols=54  Identities=20%  Similarity=0.354  Sum_probs=44.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC----EEEEEcCCC---------------CCHHhhhccCcEEEEecCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA----TVTIVHSHT---------------TDPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a----tVtv~~~~t---------------~~l~~~~~~aDivisA~g~p~~  223 (229)
                      +++.|||.|.+ |.+++..|.+.|.    .|+++++..               .+..+.++++|+||.|+ +|..
T Consensus         3 ~~i~iIG~G~m-G~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav-~~~~   75 (247)
T 3gt0_A            3 KQIGFIGCGNM-GMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSI-KPDL   75 (247)
T ss_dssp             CCEEEECCSHH-HHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECS-CTTT
T ss_pred             CeEEEECccHH-HHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEe-CHHH
Confidence            58999999996 9999999999998    899997742               24556788999999999 5543

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.51  E-value=0.0033  Score=53.82  Aligned_cols=53  Identities=15%  Similarity=0.247  Sum_probs=44.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      .+|.|||.|.+ |.+++..|.+.|..|++++ ..              .++.+.++++|+||.+++.+.
T Consensus         4 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~   70 (295)
T 1yb4_A            4 MKLGFIGLGIM-GSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTP   70 (295)
T ss_dssp             CEEEECCCSTT-HHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHH
T ss_pred             CEEEEEccCHH-HHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHH
Confidence            48999999995 9999999999999999887 32              135566789999999998764

>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}

Probab=96.51  E-value=0.15  Score=45.90  Aligned_cols=152  Identities=14%  Similarity=0.099  Sum_probs=99.8

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCC-----CCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLP-----EQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEK  115 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~-----~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~  115 (229)
                      .++.+...   .|..---+=..++.++|..+..+.-.     ..-+-+|-...+..+     +|+|.+--|  .+-..++
T Consensus        65 ~la~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~~~ssl~kgEsl~DTarvLs~~-----~D~IviR~~--~~~~~~~  134 (339)
T 4a8t_A           65 SLGMIFQQ---SSTRTRVSFETAMEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRL-----VDILMARVE--RHHSIVD  134 (339)
T ss_dssp             EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEECCC-CCSSSSSCHHHHHHHHHHH-----CSEEEEECS--SHHHHHH
T ss_pred             eEEEEecC---CCchHHHHHHHHHHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHh-----CCEEEEecC--cHHHHHH
Confidence            55555533   45555556778899999999877421     112334555555555     679999866  2222233


Q ss_pred             HHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhC--C-CCCCCeEEEEccchhhhHHHHHHHhhCCC
Q 027064          116 VLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSG--V-TIKGKRAVVVGRSNIVGLPVSLLLLKADA  192 (229)
Q Consensus       116 i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~--~-~l~gk~v~ViG~s~~VG~pla~~L~~~~a  192 (229)
                      +.+..       ++--+|.|       ....-||=+.+=+--+++..  . +++|++|++||-++-|.+.++..|..-|+
T Consensus       135 lA~~~-------~vPVINag-------~~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~  200 (339)
T 4a8t_A          135 LANCA-------TIPVINGM-------SDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGM  200 (339)
T ss_dssp             HHHHC-------SSCEEECC-------CSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESSCCHHHHHHHHHHHHTTC
T ss_pred             HHHhC-------CCCEEECC-------CCCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCC
Confidence            33322       13345543       23567998888655555443  4 79999999999998899999999999999


Q ss_pred             EEEEEcCCC-------------------------CCHHhhhccCcEEEEe
Q 027064          193 TVTIVHSHT-------------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       193 tVtv~~~~t-------------------------~~l~~~~~~aDivisA  217 (229)
                      +|++|.-.+                         .++. .++.||+|.+-
T Consensus       201 ~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd  249 (339)
T 4a8t_A          201 NFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTD  249 (339)
T ss_dssp             EEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEEC
T ss_pred             EEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEec
Confidence            999885432                         2444 67899999864

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.51  E-value=0.0072  Score=53.94  Aligned_cols=76  Identities=18%  Similarity=0.217  Sum_probs=55.0

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH---------------------
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP---------------------  204 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l---------------------  204 (229)
                      .+||....++..|++.++...|.+|+|+|.|. ||..+++++...|++|+.+.+....+                     
T Consensus       167 ~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~  245 (366)
T 1yqd_A          167 PLLCAGITVYSPLKYFGLDEPGKHIGIVGLGG-LGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQM  245 (366)
T ss_dssp             GGGTHHHHHHHHHHHTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHH
T ss_pred             hhhhhHHHHHHHHHhcCcCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHH
Confidence            45676666677777766544799999999876 69999999999999988765432211                     


Q ss_pred             HhhhccCcEEEEecCCCC
Q 027064          205 ESIVREADIVIAAAGQAM  222 (229)
Q Consensus       205 ~~~~~~aDivisA~g~p~  222 (229)
                      .+....+|+||.++|.+.
T Consensus       246 ~~~~~~~D~vid~~g~~~  263 (366)
T 1yqd_A          246 QAAAGTLDGIIDTVSAVH  263 (366)
T ss_dssp             HHTTTCEEEEEECCSSCC
T ss_pred             HHhhCCCCEEEECCCcHH
Confidence            111234799999998764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.50  E-value=0.0052  Score=51.68  Aligned_cols=38  Identities=26%  Similarity=0.322  Sum_probs=34.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+..
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~   41 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKP   41 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            57899999999999999999999999999999987653

>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}

Probab=96.50  E-value=0.049  Score=48.87  Aligned_cols=156  Identities=13%  Similarity=0.039  Sum_probs=103.4

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCC---HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVS---EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVL  117 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~---~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~  117 (229)
                      .++.+...   .|..---+=..++.++|..+....|+.+.+   -|-+.+.++-|+.-  +|+|.+--|  .+-..+.+.
T Consensus        46 ~la~lF~e---~STRTR~SFE~A~~~LGg~~i~~~l~~~ss~~kgEsl~DTarvls~~--~D~iviR~~--~~~~~~~lA  118 (328)
T 3grf_A           46 TLLAFFAK---PSLRTRVSLETAMTRLGGHAIYYELGANSNVGGKETVQDTAEVFSRM--VDICTARLA--TKEMMREMA  118 (328)
T ss_dssp             EEEEEESS---CCHHHHHHHHHHHHHHTCEEEEEEC----------CHHHHHHHHTTT--CSEEEEECS--SHHHHHHHH
T ss_pred             EEEEEecC---CCchHHHHHHHHHHHCCCeEEccccCccccCCCCCCHHHHHHHHHhh--CCEEEEecC--ChhHHHHHH
Confidence            55555533   466666677788999999998854544211   25677888888766  789999866  222223333


Q ss_pred             hcCCccCcccccCccchhhhhccCCCCCcccCCHHHHH-HHHHHhC------CCCCCCeEEEEccc-hhhhHHHHHHHhh
Q 027064          118 GEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCL-ELLKRSG------VTIKGKRAVVVGRS-NIVGLPVSLLLLK  189 (229)
Q Consensus       118 ~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~-~lL~~~~------~~l~gk~v~ViG~s-~~VG~pla~~L~~  189 (229)
                      +..    +   +--+|.|       .....||=+.+=+ .+.|+.|      .+++|+++++||-+ .-|.+.++..|..
T Consensus       119 ~~~----~---vPVINag-------~~~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~~va~Sl~~~~~~  184 (328)
T 3grf_A          119 QHA----S---VPCINAL-------DDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCAL  184 (328)
T ss_dssp             HHC----S---SCEEESS-------CSSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCCSSHHHHHHHHHHHH
T ss_pred             HhC----C---CCEEeCC-------CCCCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCCCcchHHHHHHHHHH
Confidence            322    1   3345543       1256799888854 5555555      16899999999998 6789999999998


Q ss_pred             CCCEEEEEcCCC-----------------------------CCHHhhhccCcEEEEe
Q 027064          190 ADATVTIVHSHT-----------------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       190 ~~atVtv~~~~t-----------------------------~~l~~~~~~aDivisA  217 (229)
                      -|++|++|.-.+                             .++.+.++.||+|.+-
T Consensus       185 ~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd  241 (328)
T 3grf_A          185 LGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTD  241 (328)
T ss_dssp             HTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEEC
T ss_pred             cCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEec
Confidence            899999884322                             2555778899999864

>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A

Probab=96.50  E-value=0.095  Score=46.54  Aligned_cols=153  Identities=16%  Similarity=0.166  Sum_probs=102.0

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCC-----CCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPE-----QVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEK  115 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~-----~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~  115 (229)
                      .++.+...   .|..---+=.-++.++|..+..+.-..     .-+-.|-...+..+     +|+|.+--|  .+-..++
T Consensus        41 ~l~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~-----~D~iviR~~--~~~~~~~  110 (307)
T 2i6u_A           41 GVAVIFDK---NSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRY-----VDAIVWRTF--GQERLDA  110 (307)
T ss_dssp             EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEEEGGGSGGGGTCCHHHHHHHHHHH-----EEEEEEECS--SHHHHHH
T ss_pred             EEEEEecC---CCcchHHHHHHHHHHcCCeEEEECCccccCCCCCCHHHHHHHHHHh-----CCEEEEecC--ChhHHHH
Confidence            35555543   455555667788999999988875321     11234444455554     579998866  2222233


Q ss_pred             HHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEE
Q 027064          116 VLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS-NIVGLPVSLLLLKADATV  194 (229)
Q Consensus       116 i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atV  194 (229)
                      +.+..       ++--+|.|       .....||=+.+=+--+++...+++|++|++||-+ .-|.+.++..|..-|++|
T Consensus       111 lA~~~-------~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v  176 (307)
T 2i6u_A          111 MASVA-------TVPVINAL-------SDEFHPCQVLADLQTIAERKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHV  176 (307)
T ss_dssp             HHHHC-------SSCEEESC-------CSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCTTSHHHHHHHHHHHHTTCEE
T ss_pred             HHhhC-------CCCEEcCC-------CCCcCccHHHHHHHHHHHHhCCcCCeEEEEECCCCcCcHHHHHHHHHHCCCEE
Confidence            33222       23445532       2456799888876666666568999999999997 568999999999999999


Q ss_pred             EEEcCCC-------------------------CCHHhhhccCcEEEEe
Q 027064          195 TIVHSHT-------------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       195 tv~~~~t-------------------------~~l~~~~~~aDivisA  217 (229)
                      ++|.-.+                         .++.+.++.||+|.+-
T Consensus       177 ~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~  224 (307)
T 2i6u_A          177 TVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTD  224 (307)
T ss_dssp             EEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred             EEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEec
Confidence            9985432                         2455778999999874

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.48  E-value=0.0038  Score=51.23  Aligned_cols=57  Identities=12%  Similarity=0.059  Sum_probs=46.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhC--CCEEEEEcCCCC--------------------CHHhhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSHTT--------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~--~atVtv~~~~t~--------------------~l~~~~~~aDivisA~g~p  221 (229)
                      ..+|+|+|.|+++.+|+.++..|+++  |++|+.+.+...                    ++.+.++..|+||.++|..
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~   80 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAV   80 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEecccc
Confidence            46899999999999999999999999  899998866310                    2335577899999998854

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.48  E-value=0.0031  Score=51.51  Aligned_cols=54  Identities=19%  Similarity=0.293  Sum_probs=43.5

Q ss_pred             CeEEEEccchhhhHHHHHHHh-hCCCEEEEEcCCCC------------------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLL-KADATVTIVHSHTT------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~-~~~atVtv~~~~t~------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      |+|+|.|+++-+|+.++..|+ ++|++|+++.+...                        ++.+.++..|+||.+.|.+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            679999998889999999999 89999998865421                        1235577889999998854

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.47  E-value=0.0071  Score=51.86  Aligned_cols=56  Identities=18%  Similarity=0.173  Sum_probs=45.8

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------CHHhhhccCcEEEEecCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------~l~~~~~~aDivisA~g~p~  222 (229)
                      +++|+|.|+++.+|+.++..|+++|.+|+.+.+...                 .+.+.++..|+||.++|..+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~~   74 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAATRG   74 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCCHHHHHHHTTTCSEEEECCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEccccHHHHHHhhcCCCEEEEccccCC
Confidence            479999999999999999999999999998876521                 13356778999999887654

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.47  E-value=0.0051  Score=57.17  Aligned_cols=53  Identities=32%  Similarity=0.397  Sum_probs=44.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------------CCHHhhhccCcE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------------TDPESIVREADI  213 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------------~~l~~~~~~aDi  213 (229)
                      .+|.|||.|. ||.|+|..|++.|.+|+++++..                                  .++.+.++.||+
T Consensus         3 mkI~VIG~G~-vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv   81 (450)
T 3gg2_A            3 LDIAVVGIGY-VGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI   81 (450)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred             CEEEEECcCH-HHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence            5899999999 59999999999999999986531                                  234456889999


Q ss_pred             EEEecCCC
Q 027064          214 VIAAAGQA  221 (229)
Q Consensus       214 visA~g~p  221 (229)
                      ||.+++.|
T Consensus        82 ViiaVptp   89 (450)
T 3gg2_A           82 IFIAVGTP   89 (450)
T ss_dssp             EEECCCCC
T ss_pred             EEEEcCCC
Confidence            99999987

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.47  E-value=0.005  Score=52.58  Aligned_cols=60  Identities=30%  Similarity=0.342  Sum_probs=46.9

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------C------HHhhh-------ccCcEEEEec
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------D------PESIV-------READIVIAAA  218 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------~------l~~~~-------~~aDivisA~  218 (229)
                      .+++||+|+|.|++.-+|+.++..|+++|++|.++.+...           |      +.+.+       ..-|++|...
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA   89 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNA   89 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4689999999999999999999999999999998866432           1      11222       2579999999


Q ss_pred             CCCC
Q 027064          219 GQAM  222 (229)
Q Consensus       219 g~p~  222 (229)
                      |...
T Consensus        90 g~~~   93 (269)
T 3vtz_A           90 GIEQ   93 (269)
T ss_dssp             CCCC
T ss_pred             CcCC
Confidence            8654

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.47  E-value=0.0052  Score=52.48  Aligned_cols=52  Identities=15%  Similarity=0.175  Sum_probs=42.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCC----------------CCCHHhhhc-cCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSH----------------TTDPESIVR-EADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~----------------t~~l~~~~~-~aDivisA~g~  220 (229)
                      ++|.|||.|.+ |..++..|.+.|.  +|+++++.                +.++.+.++ ++|+||.|++.
T Consensus         2 ~~I~iIG~G~m-G~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~   72 (281)
T 2g5c_A            2 QNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPV   72 (281)
T ss_dssp             CEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCH
T ss_pred             cEEEEEecCHH-HHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCH
Confidence            57999999995 9999999999998  89988763                124556778 99999999863

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.47  E-value=0.0057  Score=51.99  Aligned_cols=59  Identities=17%  Similarity=0.293  Sum_probs=46.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------C------HHhhhc-------cCcEEEEecCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------D------PESIVR-------EADIVIAAAGQ  220 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~------l~~~~~-------~aDivisA~g~  220 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+...          |      +.+.+.       .-|++|...|.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~   84 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI   84 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            468999999999999999999999999999998866421          2      112222       57999999986


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      ..
T Consensus        85 ~~   86 (264)
T 2dtx_A           85 ES   86 (264)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.46  E-value=0.0047  Score=52.30  Aligned_cols=59  Identities=22%  Similarity=0.327  Sum_probs=44.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------CH------Hhhhc-------cCcEEEEecCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------DP------ESIVR-------EADIVIAAAGQ  220 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~l------~~~~~-------~aDivisA~g~  220 (229)
                      ++.||.++|.|++.-+|+.++..|+++|++|+++.+...          |+      .+.+.       .-|++|...|.
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~   97 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGV   97 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            468999999999999999999999999999998876432          11      12222       34999999886


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      ..
T Consensus        98 ~~   99 (253)
T 2nm0_A           98 TK   99 (253)
T ss_dssp             CT
T ss_pred             CC
Confidence            43

>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A

Probab=96.46  E-value=0.089  Score=46.88  Aligned_cols=156  Identities=20%  Similarity=0.212  Sum_probs=106.3

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHh
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLG  118 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~  118 (229)
                      .++.+...   .|..---+=.-++.++|..+..+.-...  ..-|-+.+.++-|+.-  +|+|.+--|  .+-..+++.+
T Consensus        48 ~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~--~~~~~~~lA~  120 (315)
T 1pvv_A           48 TLAMIFQK---PSTRTRVSFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRY--VDAIMARVY--DHKDVEDLAK  120 (315)
T ss_dssp             EEEEEESS---CCSHHHHHHHHHHHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTT--CSEEEEECS--SHHHHHHHHH
T ss_pred             EEEEEecC---CCcchHHHHHHHHHHcCCeEEEECCccccCCCCcCHHHHHHHHHHh--CcEEEEecC--chHHHHHHHH
Confidence            35555543   4555556677889999999888863211  1125667777777665  689999866  3222233333


Q ss_pred             cCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          119 EISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       119 ~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      ..       ++--+|.|       .....||=+.+=+--+++...+++|++|++||-++-|.+.++..|..-|++|++|.
T Consensus       121 ~~-------~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~  186 (315)
T 1pvv_A          121 YA-------TVPVINGL-------SDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVAT  186 (315)
T ss_dssp             HC-------SSCEEEEE-------CSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred             hC-------CCCEEcCC-------CCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEEC
Confidence            22       13345532       13567998888766666655589999999999977789999999999999999985


Q ss_pred             CCC-------------------------CCHHhhhccCcEEEEe
Q 027064          199 SHT-------------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       199 ~~t-------------------------~~l~~~~~~aDivisA  217 (229)
                      -.+                         .++.+.++.||+|.+-
T Consensus       187 P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~  230 (315)
T 1pvv_A          187 PEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTD  230 (315)
T ss_dssp             CTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred             CccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEc
Confidence            432                         2455778899998874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.46  E-value=0.0049  Score=51.13  Aligned_cols=37  Identities=32%  Similarity=0.521  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~   40 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRK   40 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCC
Confidence            3689999999999999999999999999999988765

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=96.45  E-value=0.0049  Score=52.83  Aligned_cols=57  Identities=16%  Similarity=0.218  Sum_probs=45.9

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C------CHHhhhc--cCcEEEEecCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T------DPESIVR--EADIVIAAAGQAM  222 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~------~l~~~~~--~aDivisA~g~p~  222 (229)
                      .+++|+|.|+++.+|+.++..|+++|++|+++.+.. -      ++.+.++  ..|+||.+.|..+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   67 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVG   67 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEEcCeecC
Confidence            468999999999999999999999999998876542 1      2335566  7999999988654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.45  E-value=0.0067  Score=52.09  Aligned_cols=58  Identities=17%  Similarity=0.285  Sum_probs=46.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC------------------------HHhhhccCcEEEEecCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD------------------------PESIVREADIVIAAAGQ  220 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~------------------------l~~~~~~aDivisA~g~  220 (229)
                      ++||.++|-|.|.=+|+.++..|+++||+|.++.+....                        +.+..-+-|++|+..|.
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi   88 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI   88 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            589999999999989999999999999999999775421                        11334456999998885


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      .+
T Consensus        89 ~~   90 (242)
T 4b79_A           89 SR   90 (242)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.43  E-value=0.0051  Score=49.38  Aligned_cols=55  Identities=24%  Similarity=0.382  Sum_probs=43.3

Q ss_pred             CCC-eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----C------HHhhhcc---CcEEEEecCCC
Q 027064          166 KGK-RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----D------PESIVRE---ADIVIAAAGQA  221 (229)
Q Consensus       166 ~gk-~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----~------l~~~~~~---aDivisA~g~p  221 (229)
                      +|| +++|.|++.-+|+.++..|+ +|++|+++.+...    |      +.+.+..   .|+||.+.|..
T Consensus         1 ~~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~   69 (202)
T 3d7l_A            1 SNAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATGSA   69 (202)
T ss_dssp             CCSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            366 89999999999999999999 9999999877531    1      2233443   69999999854

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.41  E-value=0.0033  Score=51.28  Aligned_cols=54  Identities=17%  Similarity=0.169  Sum_probs=43.8

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------C----HHhhhccCcEEEEecCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------D----PESIVREADIVIAAAGQAM  222 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~----l~~~~~~aDivisA~g~p~  222 (229)
                      +|+|.|+++.+|+.++..|+++|++|+.+.+...                +    +.+.++..|+||..+|...
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~   75 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG   75 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence            7999999999999999999999999998866421                1    2345677899999998653

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.41  E-value=0.0053  Score=52.71  Aligned_cols=53  Identities=21%  Similarity=0.376  Sum_probs=44.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      .+|.|||.|.+ |.+++..|.+.|..|+++++..              .++.+.++.+|+||.+++.|
T Consensus         6 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~   72 (299)
T 1vpd_A            6 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNS   72 (299)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSH
T ss_pred             ceEEEECchHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCH
Confidence            48999999885 9999999999999999987642              24556788999999999855

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.40  E-value=0.0028  Score=53.65  Aligned_cols=56  Identities=18%  Similarity=0.222  Sum_probs=46.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------C------HHhhhccCcEEEEecCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------D------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~------l~~~~~~aDivisA~g~p  221 (229)
                      ++|+|+|.|+++-+|+.++..|+++|++|+++.+...            |      +.+.+...|+||...|..
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~   75 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGGIS   75 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc
Confidence            5789999999998999999999999999998866431            1      335677899999998863

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.40  E-value=0.0056  Score=54.57  Aligned_cols=56  Identities=21%  Similarity=0.281  Sum_probs=45.0

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC--------------------------CCHHhhhccCcEEEEecC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT--------------------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t--------------------------~~l~~~~~~aDivisA~g  219 (229)
                      ..+|+|||+|. +|.++|..|+..|. +|++.+...                          .++.+.++.||+||.++|
T Consensus         9 ~~kI~VIGaG~-vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g   87 (331)
T 1pzg_A            9 RKKVAMIGSGM-IGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG   87 (331)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred             CCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence            36899999977 59999999998887 888875532                          245557899999999998


Q ss_pred             CCCC
Q 027064          220 QAMM  223 (229)
Q Consensus       220 ~p~~  223 (229)
                      .|.-
T Consensus        88 ~p~~   91 (331)
T 1pzg_A           88 LTKV   91 (331)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            8753

>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1

Probab=96.40  E-value=0.1  Score=46.74  Aligned_cols=155  Identities=20%  Similarity=0.154  Sum_probs=105.5

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCC---HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVS---EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVL  117 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~---~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~  117 (229)
                      .++.+...   .|..---+=..++.++|..+..+.-. +.+   -|-+.+.++-|+.-  +|+|.+--|-.  -..+++.
T Consensus        60 ~la~lF~e---pSTRTR~SFE~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvLs~~--~D~iviR~~~~--~~~~~lA  131 (325)
T 1vlv_A           60 TLAMIFEK---RSTRTRLAFETAFAEEGGHPIFLSPN-DIHLGAKESLEDTARVLGRM--VDAIMFRGYKQ--ETVEKLA  131 (325)
T ss_dssp             EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECTT-TCCTTTSSCHHHHHHHHHTT--CSEEEEESSCH--HHHHHHH
T ss_pred             EEEEEecc---CCcchHHHHHHHHHHcCCeEEEECCc-cccCCCCcCHHHHHHHHHHh--CCEEEEECCCh--HHHHHHH
Confidence            35555543   56666667788999999999888632 221   14566666666655  68999986632  2222332


Q ss_pred             hcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEE
Q 027064          118 GEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTI  196 (229)
Q Consensus       118 ~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv  196 (229)
                      +..       ++--+|.|       ....-||=+.+=+--+++...+++|++|++||-+ .-|.+.++..|..-|++|++
T Consensus       132 ~~~-------~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~  197 (325)
T 1vlv_A          132 EYS-------GVPVYNGL-------TDEFHPTQALADLMTIEENFGRLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVA  197 (325)
T ss_dssp             HHH-------CSCEEESC-------CSSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             HhC-------CCCEEeCC-------CCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEE
Confidence            221       23345532       2356799888876666665558999999999996 56899999999999999999


Q ss_pred             EcCC-------------------------CCCHHhhhccCcEEEEe
Q 027064          197 VHSH-------------------------TTDPESIVREADIVIAA  217 (229)
Q Consensus       197 ~~~~-------------------------t~~l~~~~~~aDivisA  217 (229)
                      |.-.                         +.++.+.++.||+|.+-
T Consensus       198 ~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~  243 (325)
T 1vlv_A          198 CGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTD  243 (325)
T ss_dssp             ESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEEC
T ss_pred             ECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEec
Confidence            8543                         23455778999998873

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.37  E-value=0.0081  Score=50.37  Aligned_cols=59  Identities=27%  Similarity=0.353  Sum_probs=46.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------C------HHhhhc-------cCcEEEEecC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------D------PESIVR-------EADIVIAAAG  219 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------~------l~~~~~-------~aDivisA~g  219 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+...           |      +.+.+.       .-|++|...|
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag   83 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAG   83 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            578999999999999999999999999999998866421           1      112222       5799999998


Q ss_pred             CCC
Q 027064          220 QAM  222 (229)
Q Consensus       220 ~p~  222 (229)
                      ...
T Consensus        84 ~~~   86 (250)
T 2fwm_X           84 ILR   86 (250)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            643

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.36  E-value=0.014  Score=50.22  Aligned_cols=40  Identities=20%  Similarity=0.349  Sum_probs=36.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      .+|+||.++|-|+|.=+|+.++..|+++||+|.++.+...
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~   42 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAP   42 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcc
Confidence            4789999999999998999999999999999999977543

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=96.36  E-value=0.0041  Score=52.42  Aligned_cols=52  Identities=15%  Similarity=0.271  Sum_probs=44.0

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCC----CEEEEEcCCC--------CCHHhhhccCcEEEEecC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKAD----ATVTIVHSHT--------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~----atVtv~~~~t--------~~l~~~~~~aDivisA~g  219 (229)
                      ..+|.|||.|.+ |.+++..|.+.|    ..|+++++..        .+..+.++++|+||.++.
T Consensus         4 ~m~i~iiG~G~m-G~~~a~~l~~~g~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~   67 (262)
T 2rcy_A            4 NIKLGFMGLGQM-GSALAHGIANANIIKKENLFYYGPSKKNTTLNYMSSNEELARHCDIIVCAVK   67 (262)
T ss_dssp             SSCEEEECCSHH-HHHHHHHHHHHTSSCGGGEEEECSSCCSSSSEECSCHHHHHHHCSEEEECSC
T ss_pred             CCEEEEECcCHH-HHHHHHHHHHCCCCCCCeEEEEeCCcccCceEEeCCHHHHHhcCCEEEEEeC
Confidence            468999999996 999999999888    6899987653        356677889999999997

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.36  E-value=0.0049  Score=50.97  Aligned_cols=37  Identities=24%  Similarity=0.310  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~   40 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT   40 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999889999999999999999988664

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.36  E-value=0.0046  Score=52.80  Aligned_cols=59  Identities=29%  Similarity=0.364  Sum_probs=46.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------CHH------hh-------hccCcEEEEecCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------DPE------SI-------VREADIVIAAAGQ  220 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~l~------~~-------~~~aDivisA~g~  220 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+...          |+.      ..       ...-|++|...|.
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~  104 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGV  104 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence            578999999999999999999999999999999876532          111      11       2257999999986


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      ..
T Consensus       105 ~~  106 (266)
T 3uxy_A          105 IS  106 (266)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.36  E-value=0.0048  Score=51.99  Aligned_cols=37  Identities=35%  Similarity=0.495  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   45 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLD   45 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.36  E-value=0.0032  Score=56.40  Aligned_cols=50  Identities=20%  Similarity=0.333  Sum_probs=39.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------CHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------~l~~~~~~aDivisA~g  219 (229)
                      .||+|+|+|. ||++++.+|.+ +..|+++.+...                    .+.+.++++|+||+++|
T Consensus        17 mkilvlGaG~-vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p   86 (365)
T 3abi_A           17 MKVLILGAGN-IGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALP   86 (365)
T ss_dssp             CEEEEECCSH-HHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             cEEEEECCCH-HHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecC
Confidence            4799999977 69999999875 578888754211                    25577899999999986

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.35  E-value=0.0048  Score=53.66  Aligned_cols=53  Identities=26%  Similarity=0.357  Sum_probs=44.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ++|.|||.|.+ |.+++..|.+.|..|+++++..              .+..+.++++|+||.+++.|
T Consensus        31 ~~I~iIG~G~m-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~   97 (316)
T 2uyy_A           31 KKIGFLGLGLM-GSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDP   97 (316)
T ss_dssp             SCEEEECCSHH-HHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSH
T ss_pred             CeEEEEcccHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCH
Confidence            68999999995 9999999999999999997642              24556678899999999854

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.34  E-value=0.0074  Score=50.69  Aligned_cols=37  Identities=32%  Similarity=0.501  Sum_probs=33.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   37 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG   37 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3689999999999999999999999999999988654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.34  E-value=0.005  Score=51.96  Aligned_cols=37  Identities=24%  Similarity=0.412  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   41 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADID   41 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988663

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.34  E-value=0.0051  Score=53.08  Aligned_cols=37  Identities=22%  Similarity=0.293  Sum_probs=34.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+||.++|-|+|.=+|+.+|..|+++||+|.++++.
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~   40 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL   40 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC
Confidence            6899999999999889999999999999999999874

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.33  E-value=0.0068  Score=53.19  Aligned_cols=36  Identities=14%  Similarity=0.386  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhh--CCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLK--ADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~--~~atVtv~~~  199 (229)
                      +++|++|+|.|+++.+|+.++..|++  +|++|+++.+
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r   44 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK   44 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence            57899999999999999999999999  9999999865

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}

Probab=95.32  E-value=0.00062  Score=56.51  Aligned_cols=56  Identities=14%  Similarity=0.234  Sum_probs=45.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g~p  221 (229)
                      +.++++.|||.|.+ |..++..|.+.|..|+++++...            +..+.++.+|+||.++...
T Consensus        17 ~~~~~I~iIG~G~m-G~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~   84 (201)
T 2yjz_A           17 EKQGVVCIFGTGDF-GKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHRE   84 (201)
Confidence            56789999999996 99999999999999998876421            2335677899999998754

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.32  E-value=0.0087  Score=51.99  Aligned_cols=59  Identities=19%  Similarity=0.286  Sum_probs=44.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------C------HHhhhcc--CcEEEEec
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------D------PESIVRE--ADIVIAAA  218 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------~------l~~~~~~--aDivisA~  218 (229)
                      .+.+++|+|.|+++.+|+.++..|+++|++|+++.+...                 |      +.+.++.  .|+||.++
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            356899999999999999999999999999998865421                 1      2244555  89999988


Q ss_pred             CCCC
Q 027064          219 GQAM  222 (229)
Q Consensus       219 g~p~  222 (229)
                      |...
T Consensus        98 ~~~~  101 (333)
T 2q1w_A           98 ASYK  101 (333)
T ss_dssp             CCCS
T ss_pred             eecC
Confidence            8543

>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A

Probab=96.32  E-value=0.094  Score=47.54  Aligned_cols=154  Identities=14%  Similarity=0.110  Sum_probs=103.5

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVL  117 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~  117 (229)
                      .++.+..-   .|..---+=..++.++|.++..+.- .+.   .-|-+.+.++-|+.-  +|+|.+--|-  +-..+++.
T Consensus        43 ~la~lF~e---pSTRTR~SFE~A~~~LGg~vi~l~~-~~ssl~kgEsl~DTarvLs~y--~D~IviR~~~--~~~~~~lA  114 (355)
T 4a8p_A           43 SLGMIFQQ---SSTRTRVSFETAMEQLGGHGEYLAP-GQIQLGGHETIEDTSRVLSRL--VDILMARVER--HHSIVDLA  114 (355)
T ss_dssp             EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEECB-TTBCBTTTBCHHHHHHHHTTT--CSEEEEECSS--HHHHHHHH
T ss_pred             EEEEEecC---CChhhHhhHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CCEEEEecCc--HHHHHHHH
Confidence            55555533   4555555677889999999987742 221   125677777777766  7899998663  22222332


Q ss_pred             hcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhC--C-CCCCCeEEEEccchhhhHHHHHHHhhCCCEE
Q 027064          118 GEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSG--V-TIKGKRAVVVGRSNIVGLPVSLLLLKADATV  194 (229)
Q Consensus       118 ~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~--~-~l~gk~v~ViG~s~~VG~pla~~L~~~~atV  194 (229)
                      +..       ++--+|.|       .....||=+.+=+--+++..  . +++|++|++||-++-|.+.++..|..-|++|
T Consensus       115 ~~~-------~vPVINag-------~~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v  180 (355)
T 4a8p_A          115 NCA-------TIPVINGM-------SDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNF  180 (355)
T ss_dssp             HHC-------SSCEEECC-------CSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCCCHHHHHHHHHHHHTTCEE
T ss_pred             HhC-------CCCEEeCC-------CCCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEE
Confidence            322       23345543       23567998888655555444  4 7999999999999889999999999999999


Q ss_pred             EEEcCCC-------------------------CCHHhhhccCcEEEEe
Q 027064          195 TIVHSHT-------------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       195 tv~~~~t-------------------------~~l~~~~~~aDivisA  217 (229)
                      ++|.-.+                         .|+. .++.||+|.+-
T Consensus       181 ~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd  227 (355)
T 4a8p_A          181 VHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTD  227 (355)
T ss_dssp             EEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEEC
T ss_pred             EEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEec
Confidence            9885433                         2344 67889999863

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.32  E-value=0.0034  Score=53.23  Aligned_cols=55  Identities=18%  Similarity=0.257  Sum_probs=44.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCCC---------------CCHHhhhccCcEEEEecCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSHT---------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~t---------------~~l~~~~~~aDivisA~g~  220 (229)
                      +.+.+|.|||.|.+ |..++..|.+.|.. |+++++..               .++.+.++++|+||.+++.
T Consensus         8 ~~~m~i~iiG~G~m-G~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~   78 (266)
T 3d1l_A            8 IEDTPIVLIGAGNL-ATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKD   78 (266)
T ss_dssp             GGGCCEEEECCSHH-HHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCH
T ss_pred             CCCCeEEEEcCCHH-HHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCH
Confidence            34578999999985 99999999999998 88887642               2445667889999999864

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=96.31  E-value=0.005  Score=52.44  Aligned_cols=58  Identities=14%  Similarity=0.222  Sum_probs=43.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----C---HH--------h----hhccCcEEEEecCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----D---PE--------S----IVREADIVIAAAGQAM  222 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----~---l~--------~----~~~~aDivisA~g~p~  222 (229)
                      +.+++|+|.|+++.+|+.++..|+++|++|+++.+...    .   +.        +    -+...|+||.+.|..+
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~d~vi~~a~~~~   81 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSDVRLVYHLASHKS   81 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHTTEEEEEECCCCCC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccccCCEEEECCccCC
Confidence            46899999999999999999999999999999876432    1   10        0    0226799999888654

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.31  E-value=0.004  Score=54.83  Aligned_cols=55  Identities=9%  Similarity=0.001  Sum_probs=42.3

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +||.+.+++..+.+..---.|++|+|+|+|..+|..++.++...||+|+.+.+..
T Consensus       125 l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~  179 (340)
T 3gms_A          125 MYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN  179 (340)
T ss_dssp             SSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred             hcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            3666677776664443334799999999997789999999999999988876543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.31  E-value=0.004  Score=52.92  Aligned_cols=36  Identities=17%  Similarity=0.299  Sum_probs=32.2

Q ss_pred             CCCCCeEEEEccc---hhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRS---NIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s---~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+||.++|-|+|   + +|+.+|..|.++||+|.++.+.
T Consensus         3 ~l~gK~alVTGaa~~~G-IG~aiA~~la~~Ga~Vvi~~r~   41 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRS-IAFGVAKVLDQLGAKLVFTYRK   41 (256)
T ss_dssp             CCTTCEEEEECCCSTTC-HHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEECCCCCch-HHHHHHHHHHHCCCEEEEEECC
Confidence            6899999999975   5 4999999999999999999764

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.31  E-value=0.0062  Score=51.55  Aligned_cols=57  Identities=14%  Similarity=0.242  Sum_probs=46.2

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC------HHhhhc--cCcEEEEecCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD------PESIVR--EADIVIAAAGQAM  222 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~------l~~~~~--~aDivisA~g~p~  222 (229)
                      .-++|+|.|+++.+|+.++..|+++|++|+.+.+..-|      +.+.++  ..|+||.+.|...
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   75 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTA   75 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEECCccCC
Confidence            45899999999999999999999999999998775433      334565  6899999988653

>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A

Probab=96.29  E-value=0.26  Score=43.67  Aligned_cols=156  Identities=14%  Similarity=0.040  Sum_probs=102.6

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC------CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV------SEAELISKVHELNVMPDVHGILVQLPLPKHINEE  114 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~------~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~  114 (229)
                      .++.+...   .|..---+=..++.++|..+..+.-+.+.      +-+|-...+..+     +|+|.+--|-.  -..+
T Consensus        42 ~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~ss~~kgEsl~DTarvls~~-----~D~iviR~~~~--~~~~  111 (306)
T 4ekn_B           42 ILATVFYE---PSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGY-----ADIIVLRHPSE--GAAR  111 (306)
T ss_dssp             EEEEEESS---CCHHHHHHHHHHHHHTTCEEEEECCCTTTTSSSSCCHHHHHHHHHHH-----CSEEEEECSST--THHH
T ss_pred             eEEEEEcC---CChhHHhhHHHHHHHcCCEEEEcCCcccccCCCCCCHHHHHHHHHHh-----CcEEEEEcCCh--HHHH
Confidence            55555543   46666667778999999998877531222      335555555555     47999987743  2333


Q ss_pred             HHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc--hhhhHHHHHHHhhC-C
Q 027064          115 KVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS--NIVGLPVSLLLLKA-D  191 (229)
Q Consensus       115 ~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s--~~VG~pla~~L~~~-~  191 (229)
                      .+.+..       ++--+|.|     + ...+.||=+.+=+--+++...+++|++|++||-+  +-|.+.++..|..- |
T Consensus       112 ~lA~~~-------~vPVINag-----~-g~~~HPtQ~LaDl~Ti~e~~g~l~glkva~vGD~~~~rva~Sl~~~~~~~~G  178 (306)
T 4ekn_B          112 LASEYS-------QVPIINAG-----D-GSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFEN  178 (306)
T ss_dssp             HHHHHC-------SSCEEESC-----S-SSSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCTTTCHHHHHHHHHHHTSSS
T ss_pred             HHHHhC-------CCCEEeCC-----C-CCCcCcHHHHHHHHHHHHHhCCcCCCEEEEEcCCCCCcHHHHHHHHHHhcCC
Confidence            343322       12334542     1 1356799888865555544447999999999985  34799999999998 9


Q ss_pred             CEEEEEcCC---------------------CCCHHhhhccCcEEEEecC
Q 027064          192 ATVTIVHSH---------------------TTDPESIVREADIVIAAAG  219 (229)
Q Consensus       192 atVtv~~~~---------------------t~~l~~~~~~aDivisA~g  219 (229)
                      ++|++|.-.                     +.++.+.++.||+|.....
T Consensus       179 ~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~  227 (306)
T 4ekn_B          179 VEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRI  227 (306)
T ss_dssp             CEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCC
T ss_pred             CEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCc
Confidence            999988442                     2366678899999987543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.29  E-value=0.009  Score=53.17  Aligned_cols=54  Identities=24%  Similarity=0.401  Sum_probs=43.8

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------------CHHhhhccCcEEEEecC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------------~l~~~~~~aDivisA~g  219 (229)
                      .++|+|||+|. +|.++|..|+..|. +|++.+....                          ++ +.++.||+||.|+|
T Consensus        14 ~~kI~ViGaG~-vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg   91 (328)
T 2hjr_A           14 RKKISIIGAGQ-IGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG   91 (328)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred             CCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence            36899999977 59999999999988 8888765332                          33 45789999999998


Q ss_pred             CCC
Q 027064          220 QAM  222 (229)
Q Consensus       220 ~p~  222 (229)
                      .|.
T Consensus        92 ~p~   94 (328)
T 2hjr_A           92 VPR   94 (328)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            775

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.28  E-value=0.0041  Score=47.93  Aligned_cols=54  Identities=19%  Similarity=0.287  Sum_probs=41.7

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------C------HH-hhhccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------D------PE-SIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~------l~-~~~~~aDivisA~g~p  221 (229)
                      ..+++|+|.|.+ |..++..|.+.|..|+++.+...               |      +. ..+.+||.||.+++..
T Consensus         7 ~~~viIiG~G~~-G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~   82 (140)
T 3fwz_A            7 CNHALLVGYGRV-GSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG   82 (140)
T ss_dssp             CSCEEEECCSHH-HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred             CCCEEEECcCHH-HHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence            358999999995 99999999999999999876321               1      11 1257899999998853

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.27  E-value=0.01  Score=52.64  Aligned_cols=77  Identities=21%  Similarity=0.218  Sum_probs=54.8

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH--------------------
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE--------------------  205 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~--------------------  205 (229)
                      .+||....++..|++.+....|.+|+|+|.|. ||..+++++...|++|+.+.+....+.                    
T Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~  238 (357)
T 2cf5_A          160 PLLCAGVTVYSPLSHFGLKQPGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKM  238 (357)
T ss_dssp             GGGTHHHHHHHHHHHTSTTSTTCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHH
T ss_pred             hhhhhHHHHHHHHHhcCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHH
Confidence            34666666677777766544799999999876 699999999999999887755322111                    


Q ss_pred             -hhhccCcEEEEecCCCCC
Q 027064          206 -SIVREADIVIAAAGQAMM  223 (229)
Q Consensus       206 -~~~~~aDivisA~g~p~~  223 (229)
                       +....+|+||.++|.+..
T Consensus       239 ~~~~~g~D~vid~~g~~~~  257 (357)
T 2cf5_A          239 SELADSLDYVIDTVPVHHA  257 (357)
T ss_dssp             HHSTTTEEEEEECCCSCCC
T ss_pred             HHhcCCCCEEEECCCChHH
Confidence             112247999999997743

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.27  E-value=0.0059  Score=51.02  Aligned_cols=37  Identities=27%  Similarity=0.318  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+|+|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~   40 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLD   40 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988653

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.26  E-value=0.0049  Score=50.92  Aligned_cols=38  Identities=26%  Similarity=0.423  Sum_probs=34.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   40 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS   40 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999999999999999999988653

>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}

Probab=96.26  E-value=0.34  Score=42.68  Aligned_cols=151  Identities=17%  Similarity=0.146  Sum_probs=103.2

Q ss_pred             ccHHHHHHHHHHHHHcCCeeeeecCCCCC--CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHH-HHhcCCccCcccc
Q 027064           52 DSQSYVSMKRKACAEVGIKSFDIDLPEQV--SEAELISKVHELNVMPDVHGILVQLPLPKHINEEK-VLGEISLEKDVDG  128 (229)
Q Consensus        52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~-i~~~I~p~KDVDg  128 (229)
                      .|..---+=..++.++|.++..+.-..+.  .-|-+.+.++-|+.- .+|+|.+--|-...+  +. +.+..+       
T Consensus        44 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~-~~D~iviR~~~~~~~--~~~la~~~~-------  113 (291)
T 3d6n_B           44 PSTRTRLSFEKAARELGIETYLVSGSESSTVKGESFFDTLKTFEGL-GFDYVVFRVPFVFFP--YKEIVKSLN-------  113 (291)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEEETTTTSCCTTCCHHHHHHHHHHT-TCSEEEEEESSCCCS--CHHHHHTCS-------
T ss_pred             CCccHHHHHHHHHHHhCCeEEEECCccCcccCCCcHHHHHHHHHHh-cCCEEEEEcCChHHH--HHHHHHhCC-------
Confidence            56666667788999999998888633211  113344444444332 247999998855444  33 433321       


Q ss_pred             cCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEcc--chhhhHHHHHHHhhCCCEEEEEcCC------
Q 027064          129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGR--SNIVGLPVSLLLLKADATVTIVHSH------  200 (229)
Q Consensus       129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~--s~~VG~pla~~L~~~~atVtv~~~~------  200 (229)
                      +--+|.|     + .....||=+.+=+--+++...+++|+++++||-  ++-|.+.++..|..-|++|++|.-.      
T Consensus       114 vPVINAG-----~-g~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~  187 (291)
T 3d6n_B          114 LRLVNAG-----D-GTHQHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRD  187 (291)
T ss_dssp             SEEEEEE-----E-TTTBCHHHHHHHHHHHHHHHSCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT
T ss_pred             CCEEeCc-----c-CCCcCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCch
Confidence            2334543     1 245679988887666666555899999999999  6668999999999999999998542      


Q ss_pred             --------CCCHHhhhccCcEEEEecC
Q 027064          201 --------TTDPESIVREADIVIAAAG  219 (229)
Q Consensus       201 --------t~~l~~~~~~aDivisA~g  219 (229)
                              +.++.+.++.||+|.. +-
T Consensus       188 ~~~~g~~~~~d~~eav~~aDvvy~-~~  213 (291)
T 3d6n_B          188 VEVFKVDVFDDVDKGIDWADVVIW-LR  213 (291)
T ss_dssp             GGGGCEEEESSHHHHHHHCSEEEE-CC
T ss_pred             HHHCCCEEEcCHHHHhCCCCEEEE-eC
Confidence                    3467788999999987 53

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.26  E-value=0.0045  Score=53.66  Aligned_cols=54  Identities=15%  Similarity=0.231  Sum_probs=44.6

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC---------------CCHHhhhccCcEEEEecCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT---------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t---------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      .+++.|||.|.+ |..++..|.+.|.   .|+++++..               .+..+.+++||+||.|+ +|.
T Consensus         3 ~~~I~iIG~G~m-G~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav-~p~   74 (280)
T 3tri_A            3 TSNITFIGGGNM-ARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV-KPH   74 (280)
T ss_dssp             CSCEEEESCSHH-HHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS-CGG
T ss_pred             CCEEEEEcccHH-HHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe-CHH
Confidence            478999999996 9999999999998   899998743               14556788999999999 343

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.25  E-value=0.0053  Score=51.64  Aligned_cols=56  Identities=20%  Similarity=0.264  Sum_probs=43.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---------------HHhhhc-------cCcEEEEecCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---------------PESIVR-------EADIVIAAAGQA  221 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---------------l~~~~~-------~aDivisA~g~p  221 (229)
                      -||+|+|.|++.-+|+.++..|+++|++|.++.+....               +...+.       .-|+||..+|..
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~   98 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGW   98 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence            48999999999999999999999999999998775421               112222       349999999854

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.24  E-value=0.0074  Score=51.31  Aligned_cols=38  Identities=29%  Similarity=0.364  Sum_probs=32.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+..
T Consensus        24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~   61 (260)
T 3gem_A           24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE   61 (260)
T ss_dssp             ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            47899999999999899999999999999999987754

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.23  E-value=0.0062  Score=51.56  Aligned_cols=37  Identities=22%  Similarity=0.229  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL   40 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988664

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.22  E-value=0.0046  Score=52.64  Aligned_cols=56  Identities=23%  Similarity=0.385  Sum_probs=44.5

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------C------------------------CHHhhhccCcEEE
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------T------------------------DPESIVREADIVI  215 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------~------------------------~l~~~~~~aDivi  215 (229)
                      +++|+|.|+++.+|+.++..|+++|++|+++.+..       .                        ++.+.++..|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            68899999988899999999999999988876543       0                        1234567789999


Q ss_pred             EecCCCC
Q 027064          216 AAAGQAM  222 (229)
Q Consensus       216 sA~g~p~  222 (229)
                      .++|..+
T Consensus        82 ~~a~~~~   88 (307)
T 2gas_A           82 CAAGRLL   88 (307)
T ss_dssp             ECSSSSC
T ss_pred             ECCcccc
Confidence            9988543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.22  E-value=0.006  Score=51.35  Aligned_cols=37  Identities=22%  Similarity=0.351  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~   49 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA   49 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence            4789999999999999999999999999999988653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.22  E-value=0.0085  Score=50.84  Aligned_cols=58  Identities=22%  Similarity=0.275  Sum_probs=45.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------C------HHhhhc-------cCcEEEEecC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------D------PESIVR-------EADIVIAAAG  219 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~------l~~~~~-------~aDivisA~g  219 (229)
                      +.||.|+|.|++.-+|+.++..|+++|++|+++.+...            |      +.+.+.       .-|++|...|
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg  105 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAG  105 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence            67999999999999999999999999999999876532            1      112222       6799999998


Q ss_pred             CCC
Q 027064          220 QAM  222 (229)
Q Consensus       220 ~p~  222 (229)
                      ...
T Consensus       106 ~~~  108 (260)
T 3un1_A          106 VFL  108 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            643

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.21  E-value=0.01  Score=52.74  Aligned_cols=53  Identities=23%  Similarity=0.327  Sum_probs=42.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------------CHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------------~l~~~~~~aDivisA~g~  220 (229)
                      ++|+|||+|. ||.+++..|+..|. +|.+++....                          +. +.++.||+||.++|.
T Consensus         5 ~kI~VIGaG~-vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~   82 (322)
T 1t2d_A            5 AKIVLVGSGM-IGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGF   82 (322)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSC
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence            6899999977 69999999999987 8887765321                          33 558899999999987


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      |.
T Consensus        83 p~   84 (322)
T 1t2d_A           83 TK   84 (322)
T ss_dssp             SS
T ss_pred             CC
Confidence            74

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=96.21  E-value=0.01  Score=52.58  Aligned_cols=58  Identities=24%  Similarity=0.280  Sum_probs=46.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC-----------------C------HHhhhccCcEEEEecC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT-----------------D------PESIVREADIVIAAAG  219 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~-----------------~------l~~~~~~aDivisA~g  219 (229)
                      .+++++|+|.|+++.+|+.++..|+++| ++|+.+.+...                 |      +.+.++..|+||.++|
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~  108 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT  108 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence            3678999999999999999999999999 99998865421                 1      2244567899999887


Q ss_pred             CC
Q 027064          220 QA  221 (229)
Q Consensus       220 ~p  221 (229)
                      ..
T Consensus       109 ~~  110 (377)
T 2q1s_A          109 YH  110 (377)
T ss_dssp             CS
T ss_pred             cc
Confidence            54

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=96.20  E-value=0.0071  Score=51.05  Aligned_cols=54  Identities=17%  Similarity=0.262  Sum_probs=44.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC------HHhhhc--cCcEEEEecCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD------PESIVR--EADIVIAAAGQAM  222 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~------l~~~~~--~aDivisA~g~p~  222 (229)
                      +|+|.|+++.+|+.++..|+++|++|+.+.+..-|      +.+.++  ..|+||.+.|..+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~   68 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTK   68 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            89999999999999999999999999999775433      334555  5899999988654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.19  E-value=0.0063  Score=50.42  Aligned_cols=58  Identities=21%  Similarity=0.283  Sum_probs=44.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------C------HHhhh---------ccCcEEEEec
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------D------PESIV---------READIVIAAA  218 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------~------l~~~~---------~~aDivisA~  218 (229)
                      ++||+++|.|++.-+|+.++..|+++|++|+++.+...           |      +.+.+         ..-|+||...
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~A   80 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVA   80 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECC
Confidence            36899999999999999999999999999998876532           1      11112         2679999999


Q ss_pred             CCCC
Q 027064          219 GQAM  222 (229)
Q Consensus       219 g~p~  222 (229)
                      |...
T Consensus        81 g~~~   84 (236)
T 1ooe_A           81 GGWA   84 (236)
T ss_dssp             CCCC
T ss_pred             cccC
Confidence            8643

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.19  E-value=0.008  Score=55.22  Aligned_cols=53  Identities=23%  Similarity=0.229  Sum_probs=43.3

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------------CCHHhhhccCcEE
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------------TDPESIVREADIV  214 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------------~~l~~~~~~aDiv  214 (229)
                      +|.|||.|. ||.++|..|++.|..|+++++..                                  .+..+.++.||+|
T Consensus         2 kI~VIG~G~-vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv   80 (436)
T 1mv8_A            2 RISIFGLGY-VGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS   80 (436)
T ss_dssp             EEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred             EEEEECCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence            789999998 59999999999999999986521                                  1333457789999


Q ss_pred             EEecCCCC
Q 027064          215 IAAAGQAM  222 (229)
Q Consensus       215 isA~g~p~  222 (229)
                      |.|++.|.
T Consensus        81 iiaVptp~   88 (436)
T 1mv8_A           81 FICVGTPS   88 (436)
T ss_dssp             EECCCCCB
T ss_pred             EEEcCCCc
Confidence            99999875

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.19  E-value=0.0068  Score=50.81  Aligned_cols=60  Identities=17%  Similarity=0.331  Sum_probs=46.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------C------HHhhhc-------cCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------D------PESIVR-------EADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~------l~~~~~-------~aDivisA~g  219 (229)
                      .+++||+++|.|++.-+|+.++..|+++|++|+++.+...          |      +.+.+.       .-|++|...|
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag   90 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   90 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            3578999999999999999999999999999998876432          1      112222       4599999998


Q ss_pred             CCC
Q 027064          220 QAM  222 (229)
Q Consensus       220 ~p~  222 (229)
                      ...
T Consensus        91 ~~~   93 (247)
T 1uzm_A           91 LSA   93 (247)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            653

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.19  E-value=0.0051  Score=51.02  Aligned_cols=38  Identities=21%  Similarity=0.423  Sum_probs=34.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   44 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN   44 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence            35789999999999999999999999999999988653

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.18  E-value=0.0051  Score=49.91  Aligned_cols=53  Identities=17%  Similarity=0.214  Sum_probs=43.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------CHH----hhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------DPE----SIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~l~----~~~~~aDivisA~g~p  221 (229)
                      +|+|.|+++.+|+.++..|+++|++|+++.+...               |+.    +.+...|+||.+.|..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccC
Confidence            6999999988999999999999999998866421               221    4467789999998864

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.18  E-value=0.011  Score=49.71  Aligned_cols=37  Identities=19%  Similarity=0.321  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR   39 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999999999999999999999988664

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.17  E-value=0.0074  Score=46.92  Aligned_cols=54  Identities=17%  Similarity=0.263  Sum_probs=41.9

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------------C------HHh-hhccCcEEEEecC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------------D------PES-IVREADIVIAAAG  219 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------------~------l~~-~~~~aDivisA~g  219 (229)
                      ..++++|+|.|. +|+.++..|.+.|..|+++.+...                   |      +.+ .+..||.||.+++
T Consensus         2 ~~~~vlI~G~G~-vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            2 RKDHFIVCGHSI-LAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CCSCEEEECCSH-HHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCCcEEEECCCH-HHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            457899999987 599999999999999998866410                   0      112 2778999999987


Q ss_pred             C
Q 027064          220 Q  220 (229)
Q Consensus       220 ~  220 (229)
                      .
T Consensus        81 ~   81 (153)
T 1id1_A           81 N   81 (153)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.16  E-value=0.0051  Score=57.12  Aligned_cols=54  Identities=20%  Similarity=0.223  Sum_probs=42.5

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------------CHHhhhccCcEEEEecCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------------~l~~~~~~aDivisA~g~  220 (229)
                      ++|+|+|+|.|. +|+.++..|.+.|+.|+++++...                       ++.+.+..+|+||+++|.
T Consensus         2 ~~k~VlViGaG~-iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~   78 (450)
T 1ff9_A            2 ATKSVLMLGSGF-VTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY   78 (450)
T ss_dssp             CCCEEEEECCST-THHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC-
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcc
Confidence            579999999877 599999999999999999876310                       122456789999999984

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.16  E-value=0.0099  Score=51.12  Aligned_cols=36  Identities=28%  Similarity=0.331  Sum_probs=31.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++||+|+|.|+++.+|+.++..|+++|++|+++.+.
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~   36 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRR   36 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            368999999999999999999999999999988664

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=96.16  E-value=0.0073  Score=51.69  Aligned_cols=56  Identities=13%  Similarity=0.248  Sum_probs=40.5

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhcc--CcEEEEecCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVRE--ADIVIAAAGQAM  222 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~--aDivisA~g~p~  222 (229)
                      ||+|+|.|+++.+|+.++..|+++|++|+.+.+...             .+.+.++.  .|+||.+.|...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   72 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERR   72 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcccC
Confidence            689999999999999999999999999998864321             23344553  799999988543

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.16  E-value=0.0058  Score=51.56  Aligned_cols=51  Identities=14%  Similarity=0.210  Sum_probs=42.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------CCHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------~~l~~~~~~aDivisA~g  219 (229)
                      .++.|||.|.+ |.+++..|.+.|..|+++++..               .+..+.++++|+||.+++
T Consensus         4 m~i~iiG~G~m-G~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~   69 (259)
T 2ahr_A            4 MKIGIIGVGKM-ASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK   69 (259)
T ss_dssp             CEEEEECCSHH-HHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC
T ss_pred             cEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC
Confidence            48999999996 9999999999999999997632               245566789999999997

>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A

Probab=96.15  E-value=0.081  Score=48.15  Aligned_cols=152  Identities=16%  Similarity=0.149  Sum_probs=99.8

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeec-----CCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDID-----LPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEK  115 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~-----l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~  115 (229)
                      .++.+..-   .|..---+=..++..+|..+.++.     +...-+-+|-...+..+     +|+|.+--|-.  -..+.
T Consensus        73 ~va~lF~e---~STRTR~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~-----~D~IviR~~~~--~~~~~  142 (365)
T 4amu_A           73 NIAILFQK---DSTRTRCAFEVAASDLGAGVTYIGPSGSNMGKKESIEDTAKVLGRF-----YDGIEFRGFAQ--SDVDA  142 (365)
T ss_dssp             EEEEEESS---CCHHHHHHHHHHHHHHTCEEEEECHHHHCCSSSSCHHHHHHHHHHH-----CSEEEEECSCH--HHHHH
T ss_pred             eEEEEecC---CCchHHHHHHHHHHhCCCEEEEcCCccccCCCCcCHHHHHHHHHhh-----CcEEEEecCCh--hHHHH
Confidence            44555432   465555567788999999998773     22333445555555555     57999875522  12222


Q ss_pred             HHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHH-HHHHHhCCCCCCCeEEEEccc-hhhhHHHHHHHhhCCCE
Q 027064          116 VLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCL-ELLKRSGVTIKGKRAVVVGRS-NIVGLPVSLLLLKADAT  193 (229)
Q Consensus       116 i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~-~lL~~~~~~l~gk~v~ViG~s-~~VG~pla~~L~~~~at  193 (229)
                      +.+..       ++--+|.|    +   ..+-||=+.+=+ .+.|+.| .++|++|++||-+ .-|.+.++..|...|++
T Consensus       143 lA~~s-------~vPVINa~----~---~~~HPtQaLaDl~Ti~E~~G-~l~glkva~vGD~~nnva~Sl~~~~~~lG~~  207 (365)
T 4amu_A          143 LVKYS-------GVPVWNGL----T---DDEHPTQIIADFMTMKEKFG-NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMH  207 (365)
T ss_dssp             HHHHH-------CSCEEEEE----C---SSCCHHHHHHHHHHHHHHHS-SCTTCEEEEESSTTSHHHHHHHHHHHHTTCE
T ss_pred             HHHhC-------CCCEEeCC----C---CCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCcchHHHHHHHHHHcCCE
Confidence            32221       23345643    1   346799888854 4555555 6999999999988 56899999999999999


Q ss_pred             EEEEcCCC---------------------------CCHHhhhccCcEEEEe
Q 027064          194 VTIVHSHT---------------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       194 Vtv~~~~t---------------------------~~l~~~~~~aDivisA  217 (229)
                      |++|.-.+                           .++.+.++.||+|.+-
T Consensus       208 v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVytd  258 (365)
T 4amu_A          208 VVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYTD  258 (365)
T ss_dssp             EEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEEC
T ss_pred             EEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEec
Confidence            99884322                           2456778999999874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.15  E-value=0.006  Score=51.29  Aligned_cols=37  Identities=30%  Similarity=0.380  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus         6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~   42 (248)
T 3op4_A            6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS   42 (248)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999989999999999999999988664

>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A

Probab=96.15  E-value=0.053  Score=48.78  Aligned_cols=155  Identities=18%  Similarity=0.139  Sum_probs=103.2

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVL  117 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~  117 (229)
                      .++.+..   ..|..---+=.-++.++|..+.++.-. +.   .-|-+.+.++-|+.-  +|+|.+--|  .+-..+.+.
T Consensus        47 ~la~lF~---e~STRTR~SFE~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvLs~~--~D~IviR~~--~~~~~~~lA  118 (335)
T 1dxh_A           47 NIALIFE---KTSTRTRCAFEVAAYDQGANVTYIDPN-SSQIGHKESMKDTARVLGRM--YDAIEYRGF--KQEIVEELA  118 (335)
T ss_dssp             EEEEEES---SCCHHHHHHHHHHHHHTTCEEEEECTT-TCCBTTTBCHHHHHHHHHHH--CSEEEEECS--CHHHHHHHH
T ss_pred             EEEEEec---CCCcchHHHHHHHHHHcCCeEEEECCc-cccCcCCCcHHHHHHHHHhh--CCEEEEecC--ChhHHHHHH
Confidence            3555553   256666667788999999999888632 22   113344444444433  579999866  322223333


Q ss_pred             hcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCC-CCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEE
Q 027064          118 GEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGV-TIKGKRAVVVGRS-NIVGLPVSLLLLKADATVT  195 (229)
Q Consensus       118 ~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~-~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVt  195 (229)
                      +..       ++--+|.|       ...+.||=+.+=+--+++... +++|+++++||-+ .-|.+.++..|..-|++|+
T Consensus       119 ~~s-------~vPVINa~-------~~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~  184 (335)
T 1dxh_A          119 KFA-------GVPVFNGL-------TDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVR  184 (335)
T ss_dssp             HHS-------SSCEEEEE-------CSSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEE
T ss_pred             HhC-------CCCEEcCC-------CCCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEE
Confidence            222       23445532       245679988887776766656 8999999999997 5689999999999999999


Q ss_pred             EEcCC-------------------------CCCHHhhhccCcEEEEe
Q 027064          196 IVHSH-------------------------TTDPESIVREADIVIAA  217 (229)
Q Consensus       196 v~~~~-------------------------t~~l~~~~~~aDivisA  217 (229)
                      +|.-.                         |.++.+.++.||+|.+-
T Consensus       185 ~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd  231 (335)
T 1dxh_A          185 IAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD  231 (335)
T ss_dssp             EECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred             EECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeC
Confidence            98543                         23555778999998873

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.15  E-value=0.0055  Score=50.95  Aligned_cols=51  Identities=20%  Similarity=0.178  Sum_probs=40.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEE-EcCCCC---------------CHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTI-VHSHTT---------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv-~~~~t~---------------~l~~~~~~aDivisA~g  219 (229)
                      ++|.|||.|.+ |..++..|.+.|..|++ +++...               +..+.+..+|+||.|+.
T Consensus        24 mkI~IIG~G~m-G~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp   90 (220)
T 4huj_A           24 TTYAIIGAGAI-GSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVP   90 (220)
T ss_dssp             CCEEEEECHHH-HHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESC
T ss_pred             CEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCC
Confidence            68999999885 99999999999999998 655322               12244678999999986

>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*

Probab=96.14  E-value=0.0069  Score=57.48  Aligned_cols=54  Identities=26%  Similarity=0.258  Sum_probs=44.8

Q ss_pred             CCC-CeEEEEccchhhhHHHHHHHhhC------CCEEEEEcCCC-------------------CCHHhhhccCcEEEEec
Q 027064          165 IKG-KRAVVVGRSNIVGLPVSLLLLKA------DATVTIVHSHT-------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       165 l~g-k~v~ViG~s~~VG~pla~~L~~~------~atVtv~~~~t-------------------~~l~~~~~~aDivisA~  218 (229)
                      ++| |+|.|||.|.+ |.++|..|.+.      |..|++..+..                   .++.+.+++||+||.++
T Consensus        51 L~GiKkIgIIGlGsM-G~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaV  129 (525)
T 3fr7_A           51 FKGIKQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLI  129 (525)
T ss_dssp             TTTCSEEEEECCTTH-HHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECS
T ss_pred             hcCCCEEEEEeEhHH-HHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECC
Confidence            689 99999999996 99999999998      99888764431                   13457788999999998


Q ss_pred             C
Q 027064          219 G  219 (229)
Q Consensus       219 g  219 (229)
                      +
T Consensus       130 P  130 (525)
T 3fr7_A          130 S  130 (525)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A

Probab=96.14  E-value=0.26  Score=43.99  Aligned_cols=154  Identities=12%  Similarity=0.112  Sum_probs=103.6

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC-----CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ-----VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEK  115 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~-----~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~  115 (229)
                      .++.+...   .|..---+=.-++.++|.++..+.-...     -+-.|-...+..+     +|+|.+--|-  +-..+.
T Consensus        48 ~l~~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~-----~D~iviR~~~--~~~~~~  117 (321)
T 1oth_A           48 SLGMIFEK---RSTRTRLSTETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSM-----ADAVLARVYK--QSDLDT  117 (321)
T ss_dssp             EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEEETTTSCBTTTBCHHHHHHHHHHH-----CSEEEEECSC--HHHHHH
T ss_pred             EEEEEecC---CCcchHHHHHHHHHHcCCeEEEECCCcCcCCCCCCHHHHHHHHHHh-----CCEEEEeCCC--hhHHHH
Confidence            35555543   4555555677889999999988764321     1335555555555     5799997663  222233


Q ss_pred             HHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE
Q 027064          116 VLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT  195 (229)
Q Consensus       116 i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt  195 (229)
                      +.+..       ++--+|.|       .....||=+.+=+--+++...+++|++|++||-+.-|.+.++..|..-|++|+
T Consensus       118 lA~~~-------~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~  183 (321)
T 1oth_A          118 LAKEA-------SIPIINGL-------SDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQ  183 (321)
T ss_dssp             HHHHC-------SSCEEESC-------CSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCSSHHHHHHHTTTGGGTCEEE
T ss_pred             HHHhC-------CCCEEcCC-------CCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCchhhHHHHHHHHHHcCCeEE
Confidence            32221       23345532       24567998888766666655589999999999988899999999999999999


Q ss_pred             EEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          196 IVHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       196 v~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      +|.-.+                         .++.+.++.||+|..-+
T Consensus       184 ~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~  231 (321)
T 1oth_A          184 AATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT  231 (321)
T ss_dssp             EECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred             EECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEec
Confidence            985433                         24557789999998854

>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*

Probab=96.13  E-value=0.0051  Score=59.17  Aligned_cols=82  Identities=9%  Similarity=0.148  Sum_probs=69.2

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhh----CCC-------EEEEEcCCC--------------
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADA-------TVTIVHSHT--------------  201 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~----~~a-------tVtv~~~~t--------------  201 (229)
                      .-+|..|++.-|+-.+.+++.-++|+.|+|.. |-.+|.+|..    .|.       .+++|+++-              
T Consensus       300 A~V~lAgllnAlki~gk~l~d~riv~~GAGaA-gigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~  378 (605)
T 1o0s_A          300 ASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAA-STGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHV  378 (605)
T ss_dssp             HHHHHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGT
T ss_pred             HHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHHH
Confidence            35567899999999999999999999999998 9999999987    784       589997621              


Q ss_pred             ---------CCHHhhhcc--CcEEEEecCCCCCCCCCCC
Q 027064          202 ---------TDPESIVRE--ADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 ---------~~l~~~~~~--aDivisA~g~p~~i~~~~v  229 (229)
                               .+|.+.++.  +|++|-.++.|+.+++|||
T Consensus       379 ~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv  417 (605)
T 1o0s_A          379 QFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVI  417 (605)
T ss_dssp             TTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHH
T ss_pred             HHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHH
Confidence                     147788885  9999999999999998874

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.13  E-value=0.0076  Score=52.60  Aligned_cols=59  Identities=22%  Similarity=0.237  Sum_probs=46.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------------C------HHhhhccC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------------D------PESIVREA  211 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------------~------l~~~~~~a  211 (229)
                      ++.+++|+|.|+++.+|+.++..|+++|++|+++.+...                          |      +.+.++..
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  103 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV  103 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence            357899999999999999999999999999998865321                          1      22456678


Q ss_pred             cEEEEecCCCC
Q 027064          212 DIVIAAAGQAM  222 (229)
Q Consensus       212 DivisA~g~p~  222 (229)
                      |+||.++|...
T Consensus       104 d~vih~A~~~~  114 (352)
T 1sb8_A          104 DYVLHQAALGS  114 (352)
T ss_dssp             SEEEECCSCCC
T ss_pred             CEEEECCcccC
Confidence            99999888543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.13  E-value=0.0051  Score=53.79  Aligned_cols=58  Identities=24%  Similarity=0.341  Sum_probs=45.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C---------------------------CHHhhhc--cCcEE
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T---------------------------DPESIVR--EADIV  214 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~---------------------------~l~~~~~--~aDiv  214 (229)
                      .+.++|+|.|+++.+|+.++..|+++|++|+++.+.. .                           ++.+.++  .+|+|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            3468999999988899999999999999999887654 0                           1335567  89999


Q ss_pred             EEecCCCC
Q 027064          215 IAAAGQAM  222 (229)
Q Consensus       215 isA~g~p~  222 (229)
                      |.++|..+
T Consensus        88 i~~a~~~n   95 (346)
T 3i6i_A           88 VSTVGGES   95 (346)
T ss_dssp             EECCCGGG
T ss_pred             EECCchhh
Confidence            99988643

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.13  E-value=0.0078  Score=51.06  Aligned_cols=39  Identities=21%  Similarity=0.274  Sum_probs=35.0

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..+++||+|+|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~   62 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS   62 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            356899999999999999999999999999999988663

>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}

Probab=96.12  E-value=0.22  Score=45.22  Aligned_cols=153  Identities=16%  Similarity=0.135  Sum_probs=102.4

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCC-----CCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHH
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPE-----QVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEK  115 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~-----~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~  115 (229)
                      .++.+..   ..|..---+=.-++..+|..+.++.-..     .-+-.|-...+..+     +|+|.+--|  .+-..+.
T Consensus        69 ~la~lF~---e~STRTR~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~-----~D~IviR~~--~~~~~~~  138 (359)
T 2w37_A           69 NIALLFE---KSSTRTRSAFTTASIDLGAHPEYLGQNDIQLGKKESTSDTAKVLGSM-----FDGIEFRGF--KQSDAEI  138 (359)
T ss_dssp             EEEEEES---SCCHHHHHHHHHHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHHH-----CSEEEEESS--CHHHHHH
T ss_pred             EEEEEec---CCCccHHHHHHHHHHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHh-----cCEEEEecC--ChHHHHH
Confidence            3555553   3566666677889999999998885322     11334555555555     579998866  2222233


Q ss_pred             HHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEE
Q 027064          116 VLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS-NIVGLPVSLLLLKADATV  194 (229)
Q Consensus       116 i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atV  194 (229)
                      +.+..       ++--+|.|       ...+-||=+.+=+--+++...+++|+++++||-+ .-|.+.++..|...|++|
T Consensus       139 lA~~s-------~vPVINa~-------~~~~HPtQaLaDl~Ti~E~~g~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v  204 (359)
T 2w37_A          139 LARDS-------GVPVWNGL-------TDEWHPTQMLADFMTVKENFGKLQGLTLTFMGDGRNNVANSLLVTGAILGVNI  204 (359)
T ss_dssp             HHHHS-------SSCEEEEE-------CSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCTTSHHHHHHHHHHHHHTCEE
T ss_pred             HHHhC-------CCCEEcCC-------CCCCCccHHHHHHHHHHHHhCCcCCeEEEEECCCccchHHHHHHHHHHcCCEE
Confidence            33222       24445643       2356799888866666655558999999999996 568999999999999999


Q ss_pred             EEEcCC-------------------------CCCHHhhhccCcEEEEe
Q 027064          195 TIVHSH-------------------------TTDPESIVREADIVIAA  217 (229)
Q Consensus       195 tv~~~~-------------------------t~~l~~~~~~aDivisA  217 (229)
                      ++|.-.                         +.++.+.++.||+|.+-
T Consensus       205 ~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd  252 (359)
T 2w37_A          205 HIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTD  252 (359)
T ss_dssp             EEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred             EEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEc
Confidence            988542                         23556778999998874

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.12  E-value=0.011  Score=52.01  Aligned_cols=55  Identities=18%  Similarity=0.283  Sum_probs=43.9

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------------CHHhhhccCcEEEEecC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------------~l~~~~~~aDivisA~g  219 (229)
                      .++|+|||+|. +|.+++..|+..|. .|++++....                          ++ +.++.||+||.++|
T Consensus         4 ~~kI~VIGaG~-~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg   81 (317)
T 2ewd_A            4 RRKIAVIGSGQ-IGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITAS   81 (317)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred             CCEEEEECCCH-HHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence            46899999987 59999999999887 8988865321                          22 45778999999999


Q ss_pred             CCCC
Q 027064          220 QAMM  223 (229)
Q Consensus       220 ~p~~  223 (229)
                      .|.-
T Consensus        82 ~p~~   85 (317)
T 2ewd_A           82 IPGR   85 (317)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            7753

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=96.12  E-value=0.0085  Score=55.94  Aligned_cols=55  Identities=16%  Similarity=0.296  Sum_probs=45.8

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------CHHhhhccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------~l~~~~~~aDivisA~g~p  221 (229)
                      +++|+|.|+++.+|+.++..|+++|++|+.+.+...           .+.+.+..+|+||.+.|.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCCc
Confidence            789999999999999999999999999999876532           2345677899999998865

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.12  E-value=0.0065  Score=51.65  Aligned_cols=37  Identities=22%  Similarity=0.348  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~   39 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE   39 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999999999999999999999988664

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.11  E-value=0.0099  Score=50.57  Aligned_cols=50  Identities=20%  Similarity=0.174  Sum_probs=41.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------CCHHhhhccCcEEEEecCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------~~l~~~~~~aDivisA~g~  220 (229)
                      +|.|||.|.+ |..++..|.+.|.+|+++++..                .++.+. .++|+||.|++.
T Consensus         2 ~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~   67 (279)
T 2f1k_A            2 KIGVVGLGLI-GASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI   67 (279)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH
T ss_pred             EEEEEcCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH
Confidence            6899999985 9999999999999999986631                244455 789999999873

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=96.11  E-value=0.0046  Score=52.66  Aligned_cols=53  Identities=15%  Similarity=0.263  Sum_probs=42.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC-------------HHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD-------------PESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~-------------l~~~~~~aDivisA~g~p~  222 (229)
                      ++|.|||.|.+ |..++..|.+ |..|+++++....             +.+.+..+|+||.+++.+.
T Consensus         2 ~~i~iiG~G~~-G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~   67 (289)
T 2cvz_A            2 EKVAFIGLGAM-GYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTR   67 (289)
T ss_dssp             CCEEEECCSTT-HHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHH
T ss_pred             CeEEEEcccHH-HHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChH
Confidence            47999999995 9999999999 9999998764321             3355778999999998663

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.10  E-value=0.011  Score=50.63  Aligned_cols=37  Identities=27%  Similarity=0.381  Sum_probs=33.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~   63 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYV   63 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999998999999999999999988744

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.10  E-value=0.0081  Score=51.43  Aligned_cols=37  Identities=32%  Similarity=0.401  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~   62 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARD   62 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999998663

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=96.10  E-value=0.0072  Score=51.00  Aligned_cols=52  Identities=17%  Similarity=0.174  Sum_probs=42.2

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-C-------------CCHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-T-------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t-------------~~l~~~~~~aDivisA~g~p  221 (229)
                      +|.|||.|.+ |.+++..|.+.|..|+++++. +             .+..+.++++|+||.++..+
T Consensus         2 ~I~iIG~G~m-G~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~aDvvi~~v~~~   67 (264)
T 1i36_A            2 RVGFIGFGEV-AQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPG   67 (264)
T ss_dssp             EEEEESCSHH-HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGG
T ss_pred             eEEEEechHH-HHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCcCCHHHHHhcCCEEEEECCCH
Confidence            6899999996 999999999999999987652 1             13345678899999998754

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.09  E-value=0.013  Score=50.25  Aligned_cols=38  Identities=24%  Similarity=0.426  Sum_probs=34.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+..
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~   43 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSA   43 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            57899999999999999999999999999999887653

>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A

Probab=96.08  E-value=0.004  Score=59.44  Aligned_cols=86  Identities=19%  Similarity=0.231  Sum_probs=71.2

Q ss_pred             CCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhh----CCC-------EEEEEcCCC----------
Q 027064          143 DPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADA-------TVTIVHSHT----------  201 (229)
Q Consensus       143 ~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~----~~a-------tVtv~~~~t----------  201 (229)
                      ..+-.-+|..|++.-|+-.+.+++.-++|+.|+|.. |-.++.+|..    .|.       .+++|+++-          
T Consensus       258 iqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaA-g~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~  336 (555)
T 1gq2_A          258 IQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEA-ALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLT  336 (555)
T ss_dssp             THHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHH-HHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCC
T ss_pred             cchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCch
Confidence            444446677899999999999999999999999998 9999999987    674       589997621          


Q ss_pred             -------------CCHHhhhcc--CcEEEEecCCCCCCCCCCC
Q 027064          202 -------------TDPESIVRE--ADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 -------------~~l~~~~~~--aDivisA~g~p~~i~~~~v  229 (229)
                                   .+|.+.++.  +|++|-.++.|+.+++|||
T Consensus       337 ~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv  379 (555)
T 1gq2_A          337 PEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQIL  379 (555)
T ss_dssp             TTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHH
T ss_pred             HHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHH
Confidence                         147788884  9999999999999998874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.08  E-value=0.0079  Score=51.37  Aligned_cols=37  Identities=24%  Similarity=0.259  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   55 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG   55 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3689999999999999999999999999999988664

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.08  E-value=0.01  Score=49.31  Aligned_cols=58  Identities=14%  Similarity=0.207  Sum_probs=45.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------C------HHhhh---------ccCcEEEEec
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------D------PESIV---------READIVIAAA  218 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------~------l~~~~---------~~aDivisA~  218 (229)
                      .+||+++|.|+|.-+|+.++..|+++|++|+++.+...           |      +.+.+         ..-|++|...
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~A   84 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVA   84 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcc
Confidence            47899999999999999999999999999999876532           1      11222         2679999999


Q ss_pred             CCCC
Q 027064          219 GQAM  222 (229)
Q Consensus       219 g~p~  222 (229)
                      |...
T Consensus        85 g~~~   88 (241)
T 1dhr_A           85 GGWA   88 (241)
T ss_dssp             CCCC
T ss_pred             cccC
Confidence            8643

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.08  E-value=0.011  Score=50.87  Aligned_cols=51  Identities=18%  Similarity=0.336  Sum_probs=42.1

Q ss_pred             CeEEEEcc-chhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGR-SNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~-s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g  219 (229)
                      ++|.|||. |. +|.+++..|.+.|..|+++++...             +..+.++++|+||.|++
T Consensus        12 m~I~iIG~tG~-mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           12 KTVAILGAGGK-MGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALP   76 (286)
T ss_dssp             CEEEEETTTSH-HHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSC
T ss_pred             CEEEEECCCCH-HHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCC
Confidence            58999999 77 599999999999999999876421             33456788999999986

>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*

Probab=96.08  E-value=0.0076  Score=55.39  Aligned_cols=57  Identities=25%  Similarity=0.418  Sum_probs=46.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC-----------------HHhhhccCcEEEEecCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD-----------------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~-----------------l~~~~~~aDivisA~g~p  221 (229)
                      +++||+|+|||.|.. |...+.+|.++|++|+.++++...                 ..+.+..+|.||.+.|.|
T Consensus         2 ~~~~~~v~viG~G~~-G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~~G~~~~~g~~~~~~~~~~d~vV~s~gi~   75 (439)
T 2x5o_A            2 DYQGKNVVIIGLGLT-GLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIA   75 (439)
T ss_dssp             CCTTCCEEEECCHHH-HHHHHHHHHTTTCCCEEEESSSSCTTGGGSCTTSCEEESSCCHHHHHTCSEEEECTTSC
T ss_pred             CCCCCEEEEEeecHH-HHHHHHHHHhCCCEEEEEECCCCcchhHHhhCCCEEEECCCcHHHhccCCEEEeCCCCC
Confidence            367999999999997 999999999999999999875321                 113345789999998875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.08  E-value=0.013  Score=50.14  Aligned_cols=38  Identities=24%  Similarity=0.297  Sum_probs=34.5

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   64 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT   64 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH
Confidence            46899999999999999999999999999999988743

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.07  E-value=0.005  Score=50.67  Aligned_cols=58  Identities=21%  Similarity=0.214  Sum_probs=45.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-C------HHhh---hccCcEEEEecCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-D------PESI---VREADIVIAAAGQA  221 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-~------l~~~---~~~aDivisA~g~p  221 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+... |      +.+.   +..-|++|...|..
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            367999999999999999999999999999999876531 2      2222   23579999999864

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=96.06  E-value=0.016  Score=52.11  Aligned_cols=56  Identities=9%  Similarity=0.188  Sum_probs=44.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHh-hCC-CEEEEEcCCC---------------------CCHHhhhccCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLL-KAD-ATVTIVHSHT---------------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~-~~~-atVtv~~~~t---------------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ..++++.|||.|.+ |+..+..|. .++ ..|+++++..                     .++.+.+++||+||+||+.+
T Consensus       127 ~~~~~v~iIGaG~~-a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~  205 (350)
T 1x7d_A          127 PNARKMALIGNGAQ-SEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADK  205 (350)
T ss_dssp             TTCCEEEEECCSTT-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCS
T ss_pred             ccCCeEEEECCcHH-HHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCC
Confidence            46899999999996 999887764 344 4799997641                     24557788999999999976

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.05  E-value=0.0062  Score=51.96  Aligned_cols=37  Identities=19%  Similarity=0.352  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~   60 (266)
T 3grp_A           24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR   60 (266)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5889999999999999999999999999999988653

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=96.04  E-value=0.012  Score=54.60  Aligned_cols=54  Identities=31%  Similarity=0.393  Sum_probs=45.6

Q ss_pred             CcccCCHHHHHHHH----HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcC
Q 027064          145 LFLPCTPKGCLELL----KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHS  199 (229)
Q Consensus       145 ~~~PcTa~av~~lL----~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~  199 (229)
                      ...+.|.+|++..+    ++.+.+++||+|+|.|.|+ ||..++.+|.+.|++|. ++++
T Consensus       192 ~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~Gn-VG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          192 GRDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQ-VGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             SCSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCH-HHHHHHHHHHHCCCEEEEEEcC
Confidence            34478999887664    5578899999999999999 59999999999999876 7776

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=96.03  E-value=0.017  Score=51.15  Aligned_cols=58  Identities=12%  Similarity=0.092  Sum_probs=46.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------C------HHhhhccCcEEEEecCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------D------PESIVREADIVIAAAGQAM  222 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~------l~~~~~~aDivisA~g~p~  222 (229)
                      ..+++|+|.|+++.+|+.++..|+++|++|+.+.+...               |      +.+.++..|+||.++|...
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~  105 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMG  105 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecC
Confidence            46799999999999999999999999999998866421               1      2355678899999988543

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.02  E-value=0.018  Score=50.80  Aligned_cols=53  Identities=13%  Similarity=0.150  Sum_probs=40.5

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+||....++..|++.++ -.|++|+|+|++.-+|..++.++...|++|+.+.+
T Consensus       150 ~l~~~~~ta~~~l~~~~~-~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~  202 (347)
T 2hcy_A          150 PILCAGITVYKALKSANL-MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG  202 (347)
T ss_dssp             GGGTHHHHHHHHHHTTTC-CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             HHhhhHHHHHHHHHhcCC-CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcC
Confidence            346655555666665543 36999999999666799999999999999888764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.01  E-value=0.0093  Score=50.76  Aligned_cols=38  Identities=26%  Similarity=0.393  Sum_probs=34.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|.++.+..
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~   45 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPE   45 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            57899999999999899999999999999999987654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.01  E-value=0.009  Score=51.23  Aligned_cols=38  Identities=18%  Similarity=0.316  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~   60 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN   60 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999999999999999999988664

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.00  E-value=0.01  Score=52.36  Aligned_cols=54  Identities=19%  Similarity=0.164  Sum_probs=40.8

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +||....++..|.+...--.|++|+|.|+++.+|..+++++...|++|+.+.+.
T Consensus       140 l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~  193 (342)
T 4eye_A          140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR  193 (342)
T ss_dssp             HTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             hhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            455555666666444433479999999996667999999999999998887653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.00  E-value=0.015  Score=49.82  Aligned_cols=35  Identities=23%  Similarity=0.188  Sum_probs=31.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++|++|+|.|+++.+|+.++..|+++|++|+++.+
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r   43 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR   43 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence            57899999999999999999999999999988754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.99  E-value=0.0095  Score=50.79  Aligned_cols=37  Identities=27%  Similarity=0.372  Sum_probs=33.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+++||.|+|.|++.-+|+.++..|+++|++|.++.+
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~   60 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYA   60 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999988999999999999999988765

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=95.97  E-value=0.0097  Score=53.58  Aligned_cols=53  Identities=11%  Similarity=0.200  Sum_probs=43.9

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC----------------------------CCCHHhhhccCcEEEEec
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH----------------------------TTDPESIVREADIVIAAA  218 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~----------------------------t~~l~~~~~~aDivisA~  218 (229)
                      -.+|.|||.|.+ |.+++..|.+.|.+|+++.+.                            |.++.+.++.||+||.|+
T Consensus        29 ~mkI~VIGaG~m-G~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV  107 (356)
T 3k96_A           29 KHPIAILGAGSW-GTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV  107 (356)
T ss_dssp             CSCEEEECCSHH-HHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred             CCeEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence            368999999995 999999999999999998663                            124556788999999998


Q ss_pred             CC
Q 027064          219 GQ  220 (229)
Q Consensus       219 g~  220 (229)
                      +.
T Consensus       108 p~  109 (356)
T 3k96_A          108 PS  109 (356)
T ss_dssp             CH
T ss_pred             CH
Confidence            63

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=95.97  E-value=0.014  Score=54.29  Aligned_cols=54  Identities=26%  Similarity=0.327  Sum_probs=45.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------------CCHHhhhccCcE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------------TDPESIVREADI  213 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------------~~l~~~~~~aDi  213 (229)
                      -++.|||.|-+ |.|+|..|++.|.+|+++++..                                  .++.+.++.||+
T Consensus         9 ~~~~vIGlG~v-G~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv   87 (446)
T 4a7p_A            9 VRIAMIGTGYV-GLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA   87 (446)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred             eEEEEEcCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence            58999999995 9999999999999999996632                                  134456788999


Q ss_pred             EEEecCCCC
Q 027064          214 VIAAAGQAM  222 (229)
Q Consensus       214 visA~g~p~  222 (229)
                      ||.++|.|.
T Consensus        88 vii~Vptp~   96 (446)
T 4a7p_A           88 VFIAVGTPS   96 (446)
T ss_dssp             EEECCCCCB
T ss_pred             EEEEcCCCC
Confidence            999988874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.96  E-value=0.016  Score=51.87  Aligned_cols=75  Identities=17%  Similarity=0.189  Sum_probs=53.0

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH--------------------Hh
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP--------------------ES  206 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l--------------------~~  206 (229)
                      +||....++..|++.++. .|.+|+|+|.|. ||..+++++...|++|+.+.+....+                    .+
T Consensus       176 l~~~~~tA~~al~~~~~~-~g~~VlV~GaG~-vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~  253 (369)
T 1uuf_A          176 LLCAGITTYSPLRHWQAG-PGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAA  253 (369)
T ss_dssp             GGTHHHHHHHHHHHTTCC-TTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHT
T ss_pred             hhhhHHHHHHHHHhcCCC-CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHH
Confidence            456555556667665443 699999999977 79999999999999988765432111                    11


Q ss_pred             hhccCcEEEEecCCCCC
Q 027064          207 IVREADIVIAAAGQAMM  223 (229)
Q Consensus       207 ~~~~aDivisA~g~p~~  223 (229)
                      ....+|+||.++|.+..
T Consensus       254 ~~~g~Dvvid~~g~~~~  270 (369)
T 1uuf_A          254 HLKSFDFILNTVAAPHN  270 (369)
T ss_dssp             TTTCEEEEEECCSSCCC
T ss_pred             hhcCCCEEEECCCCHHH
Confidence            22357999999998753

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=95.96  E-value=0.019  Score=50.51  Aligned_cols=74  Identities=15%  Similarity=0.161  Sum_probs=52.7

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------CCHHh
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------TDPES  206 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------~~l~~  206 (229)
                      .+||....++..|++.++ -.|++|+|+|+|. +|..+++++...|++|+.+.+..                   .++.+
T Consensus       145 ~l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~  222 (339)
T 1rjw_A          145 PIFCAGVTTYKALKVTGA-KPGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAK  222 (339)
T ss_dssp             GGGTHHHHHHHHHHHHTC-CTTCEEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHH
T ss_pred             hhhhhHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHH
Confidence            356665556666766653 3699999999977 79999999999999988876421                   12222


Q ss_pred             hh----ccCcEEEEecCCC
Q 027064          207 IV----READIVIAAAGQA  221 (229)
Q Consensus       207 ~~----~~aDivisA~g~p  221 (229)
                      .+    ...|+||.++|.+
T Consensus       223 ~~~~~~~~~d~vid~~g~~  241 (339)
T 1rjw_A          223 FMKEKVGGVHAAVVTAVSK  241 (339)
T ss_dssp             HHHHHHSSEEEEEESSCCH
T ss_pred             HHHHHhCCCCEEEECCCCH
Confidence            22    3579999998864

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=95.95  E-value=0.0065  Score=51.31  Aligned_cols=38  Identities=21%  Similarity=0.303  Sum_probs=34.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   45 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK   45 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999999999999999988664

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=95.95  E-value=0.0073  Score=51.90  Aligned_cols=37  Identities=27%  Similarity=0.348  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~   62 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADID   62 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999889999999999999999998664

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=95.94  E-value=0.01  Score=51.69  Aligned_cols=37  Identities=24%  Similarity=0.346  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.++|-|+|.=+|+.+|..|+++||+|.++.+.
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~   62 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRR   62 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4899999999999889999999999999999999764

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.94  E-value=0.013  Score=51.19  Aligned_cols=74  Identities=26%  Similarity=0.277  Sum_probs=50.9

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC------------------CCCC-HHhh
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS------------------HTTD-PESI  207 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~------------------~t~~-l~~~  207 (229)
                      +||....++..|+..++ -.|.+|+|+|+++.||..+++++...||+|+.+.+                  +..+ ..+.
T Consensus       134 l~~~~~ta~~al~~~~~-~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~  212 (321)
T 3tqh_A          134 LPTAGLTALQALNQAEV-KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAI  212 (321)
T ss_dssp             SHHHHHHHHHHHHHTTC-CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHC
T ss_pred             hhhHHHHHHHHHHhcCC-CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhh
Confidence            35544445555654443 47999999985555799999999999998876533                  1223 4444


Q ss_pred             hccCcEEEEecCCC
Q 027064          208 VREADIVIAAAGQA  221 (229)
Q Consensus       208 ~~~aDivisA~g~p  221 (229)
                      ++.+|+||.++|.+
T Consensus       213 ~~g~D~v~d~~g~~  226 (321)
T 3tqh_A          213 STPVDAVIDLVGGD  226 (321)
T ss_dssp             CSCEEEEEESSCHH
T ss_pred             ccCCCEEEECCCcH
Confidence            56678999888864

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=95.93  E-value=0.005  Score=54.32  Aligned_cols=55  Identities=24%  Similarity=0.303  Sum_probs=46.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC-CC-CCHHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS-HT-TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~-~t-~~l~~~~~~aDivisA~g~p~  222 (229)
                      ++|+|.|+++.+|+.++..|+++|. +|+.+++ .. .++.+.++.+|+||.+.|...
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~   58 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGVNR   58 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCSBC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcCCC
Confidence            4799999999999999999999999 9999887 33 356677889999999887543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.92  E-value=0.011  Score=48.58  Aligned_cols=56  Identities=23%  Similarity=0.283  Sum_probs=44.0

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------C------HHhhhc------cCcEEEEecCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------D------PESIVR------EADIVIAAAGQAM  222 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------~------l~~~~~------~aDivisA~g~p~  222 (229)
                      ||+++|.|++.-+|+.++..|+++|++|+++.+...         |      +.+.+.      .-|++|..+|...
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~   78 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGL   78 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccC
Confidence            789999999999999999999999999998866432         1      223333      5699999988543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.91  E-value=0.013  Score=51.22  Aligned_cols=59  Identities=14%  Similarity=0.268  Sum_probs=42.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCCC--------------------HHhhhc-----cCcEEEEe
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTTD--------------------PESIVR-----EADIVIAA  217 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~~--------------------l~~~~~-----~aDivisA  217 (229)
                      +++|++|+|.|+++.+|+.++..|+++| ++|+++.+....                    +...++     ..|+||.+
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~  122 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHE  122 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence            3578999999999999999999999999 899988664221                    123343     48999999


Q ss_pred             cCCCC
Q 027064          218 AGQAM  222 (229)
Q Consensus       218 ~g~p~  222 (229)
                      +|...
T Consensus       123 A~~~~  127 (357)
T 2x6t_A          123 GACSS  127 (357)
T ss_dssp             CSCCC
T ss_pred             CcccC
Confidence            88654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.90  E-value=0.0059  Score=51.35  Aligned_cols=37  Identities=32%  Similarity=0.428  Sum_probs=30.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.++
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   42 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR   42 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc
Confidence            5789999999999889999999999999999988764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.90  E-value=0.016  Score=49.76  Aligned_cols=36  Identities=28%  Similarity=0.402  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++.||.++|.|++.-+|+.++..|+++|++|.++.+
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r   57 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGF   57 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            578999999999998999999999999999999876

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=95.90  E-value=0.03  Score=49.23  Aligned_cols=57  Identities=12%  Similarity=0.138  Sum_probs=46.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhC-CC-EEEEEcCCC-----------------CCHHhhhccCcEEEEecCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKA-DA-TVTIVHSHT-----------------TDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~-~a-tVtv~~~~t-----------------~~l~~~~~~aDivisA~g~p  221 (229)
                      ...++++.|||.|.+ |++++..|.+. |. .|+++++..                 .++.+.++.+|+||.+|...
T Consensus       132 ~~~~~~igiIG~G~~-g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~  207 (312)
T 2i99_A          132 PPSSEVLCILGAGVQ-AYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT  207 (312)
T ss_dssp             CTTCCEEEEECCSHH-HHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS
T ss_pred             CCCCcEEEEECCcHH-HHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC
Confidence            457899999999996 99999998765 76 899997641                 24567788999999999753

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=95.88  E-value=0.016  Score=49.30  Aligned_cols=55  Identities=22%  Similarity=0.290  Sum_probs=42.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------C-----HHhhhccCcEEEEecCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------D-----PESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~-----l~~~~~~aDivisA~g~p~~  223 (229)
                      ++|+|.|+++.+|+.++..|+++|++|+++.+...               |     +.+.++. |+||...|.+..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~~~   75 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAANPEV   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCSSCSS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCCCCCc
Confidence            57999999999999999999999999998866322               1     1222333 999999886543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=95.88  E-value=0.011  Score=53.23  Aligned_cols=57  Identities=12%  Similarity=0.296  Sum_probs=42.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCC-----------------------CCCHHhhhccCcEEEEecCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSH-----------------------TTDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~-----------------------t~~l~~~~~~aDivisA~g~  220 (229)
                      .+++|+|||+++.||.+++..|+.+|.  .|.+++..                       |.+..+.++.||+||.+.|.
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG~   86 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGGA   86 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccCC
Confidence            578999999844479999998888874  68877542                       12555679999999999997


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      |.
T Consensus        87 p~   88 (343)
T 3fi9_A           87 PR   88 (343)
T ss_dssp             --
T ss_pred             CC
Confidence            74

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.88  E-value=0.0088  Score=50.13  Aligned_cols=38  Identities=13%  Similarity=0.169  Sum_probs=33.4

Q ss_pred             CCCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++++|+|+|.|++  .-+|+.++..|+++|++|.++.+.
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~   49 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVG   49 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecc
Confidence            46789999999987  667999999999999999988654

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=95.88  E-value=0.03  Score=49.55  Aligned_cols=62  Identities=11%  Similarity=0.043  Sum_probs=46.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhh-CC-CEEEEEcCCC-------------------CCHHhhhccCcEEEEecCCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLK-AD-ATVTIVHSHT-------------------TDPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~-~~-atVtv~~~~t-------------------~~l~~~~~~aDivisA~g~p~~  223 (229)
                      ..++++.|||.|.+ |+..+..|.. ++ ..|+++++..                   .++.+.+ ++|+||+||+....
T Consensus       123 ~~~~~v~iIGaG~~-a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~p  200 (322)
T 1omo_A          123 KNSSVFGFIGCGTQ-AYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRKP  200 (322)
T ss_dssp             TTCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSSC
T ss_pred             CCCCEEEEEcCcHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCCc
Confidence            36799999999996 9999988876 44 4799998742                   2345667 89999999997654


Q ss_pred             -CCCCC
Q 027064          224 -VTMGI  228 (229)
Q Consensus       224 -i~~~~  228 (229)
                       +..+|
T Consensus       201 v~~~~~  206 (322)
T 1omo_A          201 VVKAEW  206 (322)
T ss_dssp             CBCGGG
T ss_pred             eecHHH
Confidence             34344

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=95.87  E-value=0.011  Score=51.21  Aligned_cols=38  Identities=18%  Similarity=0.349  Sum_probs=32.9

Q ss_pred             CCCCCCeEEEEccch--hhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSN--IVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~--~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.  -+|+.++..|+++|++|.++.+.
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~   65 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS   65 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence            357899999999973  46999999999999999988664

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=95.86  E-value=0.004  Score=53.76  Aligned_cols=38  Identities=26%  Similarity=0.323  Sum_probs=35.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|+||.++|-|+|.=+|+.++..|+++||+|.++.+.
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~   42 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIR   42 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            47899999999999999999999999999999998764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.86  E-value=0.01  Score=50.31  Aligned_cols=36  Identities=22%  Similarity=0.123  Sum_probs=32.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~   38 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARR   38 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            578999999999999999999999999999988764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.86  E-value=0.0073  Score=53.03  Aligned_cols=58  Identities=22%  Similarity=0.380  Sum_probs=44.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCCCC--------------------C---HHhhhccCcEEEEecC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSHTT--------------------D---PESIVREADIVIAAAG  219 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~t~--------------------~---l~~~~~~aDivisA~g  219 (229)
                      .+.+++|+|.|+++.+|+.++..|+++ |++|+.+.+...                    +   +.+.++..|+||...|
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~  100 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA  100 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence            357899999999999999999999998 899998876432                    1   2235667899998777


Q ss_pred             CC
Q 027064          220 QA  221 (229)
Q Consensus       220 ~p  221 (229)
                      ..
T Consensus       101 ~~  102 (372)
T 3slg_A          101 IA  102 (372)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.86  E-value=0.0071  Score=51.77  Aligned_cols=34  Identities=21%  Similarity=0.481  Sum_probs=30.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      +++++|+|||.|++ |.+++..|...|. ++++++.
T Consensus        26 l~~~~VlvvG~Ggl-G~~va~~La~~Gvg~i~lvD~   60 (251)
T 1zud_1           26 LLDSQVLIIGLGGL-GTPAALYLAGAGVGTLVLADD   60 (251)
T ss_dssp             HHTCEEEEECCSTT-HHHHHHHHHHTTCSEEEEECC
T ss_pred             HhcCcEEEEccCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence            56899999999995 9999999999998 7888843

>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*

Probab=95.85  E-value=0.03  Score=50.39  Aligned_cols=154  Identities=16%  Similarity=0.072  Sum_probs=104.7

Q ss_pred             EEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHh
Q 027064           42 LAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLG  118 (229)
Q Consensus        42 LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~  118 (229)
                      ++.+...   .|..---+=.-++..+|..+.++.-. +.   .-|-+.+.++-|+.-  +|+|.+--|  .+-..+.+.+
T Consensus        47 la~lF~e---~STRTR~SFE~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvLs~~--~D~IviR~~--~~~~~~~lA~  118 (333)
T 1duv_G           47 IALIFEK---DSTRTRCSFEVAAYDQGARVTYLGPS-GSQIGHKESIKDTARVLGRM--YDGIQYRGY--GQEIVETLAE  118 (333)
T ss_dssp             EEEEESS---CCSHHHHHHHHHHHHTTCEEEEECSS-SSCBTTTBCHHHHHHHHTTT--CSEEEEECS--CHHHHHHHHH
T ss_pred             EEEEecC---CCccHHHHHHHHHHHcCCeEEEECCc-cccCcCCCcHHHHHHHHHHh--CCEEEEEcC--CchHHHHHHH
Confidence            4555532   45555556778899999999888532 21   125577777777766  689999866  2222223322


Q ss_pred             cCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHh-CC-CCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEE
Q 027064          119 EISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS-GV-TIKGKRAVVVGRS-NIVGLPVSLLLLKADATVT  195 (229)
Q Consensus       119 ~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~-~~-~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVt  195 (229)
                      ..       ++--+|.|       ...+.||=+.+=+--+++. .. +++|+++++||-+ .-|.+.++..|...|++|+
T Consensus       119 ~~-------~vPVINa~-------~~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~  184 (333)
T 1duv_G          119 YA-------SVPVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLR  184 (333)
T ss_dssp             HH-------SSCEEESC-------CSSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEE
T ss_pred             hC-------CCCeEcCC-------CCCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEE
Confidence            21       23345532       2456799888877666666 44 8999999999996 5689999999999999999


Q ss_pred             EEcCC-------------------------CCCHHhhhccCcEEEEe
Q 027064          196 IVHSH-------------------------TTDPESIVREADIVIAA  217 (229)
Q Consensus       196 v~~~~-------------------------t~~l~~~~~~aDivisA  217 (229)
                      +|.-.                         +.++.+.++.||+|.+-
T Consensus       185 ~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd  231 (333)
T 1duv_G          185 LVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD  231 (333)
T ss_dssp             EECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred             EECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeC
Confidence            88542                         23556778999998873

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=95.85  E-value=0.021  Score=50.86  Aligned_cols=75  Identities=25%  Similarity=0.351  Sum_probs=49.8

Q ss_pred             ccCCHHHHHHHHHHhCC----CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------------CH
Q 027064          147 LPCTPKGCLELLKRSGV----TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------------DP  204 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~----~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------------~l  204 (229)
                      +||....++..|.+..-    .-.|++|+|.|+++.||..+++++...|++|+.+.+..+                  +.
T Consensus       160 l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~  239 (375)
T 2vn8_A          160 LPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSV  239 (375)
T ss_dssp             SHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCH
T ss_pred             hHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHH
Confidence            45544455555643322    347999999997666799999999999998876643211                  12


Q ss_pred             Hhhh---ccCcEEEEecCCC
Q 027064          205 ESIV---READIVIAAAGQA  221 (229)
Q Consensus       205 ~~~~---~~aDivisA~g~p  221 (229)
                      .+.+   ...|+||.++|.+
T Consensus       240 ~~~~~~~~g~D~vid~~g~~  259 (375)
T 2vn8_A          240 EEQLKSLKPFDFILDNVGGS  259 (375)
T ss_dssp             HHHHHTSCCBSEEEESSCTT
T ss_pred             HHHHhhcCCCCEEEECCCCh
Confidence            1222   2479999999876

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=95.85  E-value=0.017  Score=50.36  Aligned_cols=36  Identities=33%  Similarity=0.305  Sum_probs=32.6

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.|++|+|.|+++.+|+.++..|+++|++|+.+.+.
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   42 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLT   42 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCC
Confidence            468999999999999999999999999999988664

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=95.85  E-value=0.0082  Score=50.64  Aligned_cols=37  Identities=16%  Similarity=0.222  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~   40 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRN   40 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999998775

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.84  E-value=0.0095  Score=51.21  Aligned_cols=55  Identities=18%  Similarity=0.194  Sum_probs=44.0

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C-----------------------------CHHhhhccCcEEEE
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T-----------------------------DPESIVREADIVIA  216 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~-----------------------------~l~~~~~~aDivis  216 (229)
                      .++|+|.|+++.+|+.++..|+++|++|+++.+.. .                             ++.+.++.+|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            57899999988899999999999999998876643 0                             13355777899999


Q ss_pred             ecCCC
Q 027064          217 AAGQA  221 (229)
Q Consensus       217 A~g~p  221 (229)
                      ++|..
T Consensus        84 ~a~~~   88 (321)
T 3c1o_A           84 ALPFP   88 (321)
T ss_dssp             CCCGG
T ss_pred             CCCcc
Confidence            88754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.82  E-value=0.017  Score=48.25  Aligned_cols=37  Identities=14%  Similarity=0.123  Sum_probs=32.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCC---CEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKAD---ATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~---atVtv~~~~  200 (229)
                      +++||+|+|.|++.-+|+.++..|+++|   ++|+++.+.
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~   57 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN   57 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecC
Confidence            5789999999999999999999999999   899988664

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.82  E-value=0.0098  Score=48.91  Aligned_cols=35  Identities=17%  Similarity=0.192  Sum_probs=32.0

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+|+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~   38 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARD   38 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            47899999999999999999999999999988664

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=95.82  E-value=0.0096  Score=51.77  Aligned_cols=52  Identities=19%  Similarity=0.300  Sum_probs=42.2

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcC--CC-------------------------C--CHHhhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHS--HT-------------------------T--DPESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~--~t-------------------------~--~l~~~~~~aDivisA~g  219 (229)
                      +|.|||.|.+ |.+++..|.+.|.+|+++++  ..                         .  ++.+.++.+|+||.+++
T Consensus         2 ~I~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~   80 (335)
T 1txg_A            2 IVSILGAGAM-GSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS   80 (335)
T ss_dssp             EEEEESCCHH-HHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred             EEEEECcCHH-HHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence            6899999995 99999999999999999977  31                         1  33455778999999987


Q ss_pred             CC
Q 027064          220 QA  221 (229)
Q Consensus       220 ~p  221 (229)
                      .+
T Consensus        81 ~~   82 (335)
T 1txg_A           81 TD   82 (335)
T ss_dssp             GG
T ss_pred             hH
Confidence            54

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=95.81  E-value=0.012  Score=50.00  Aligned_cols=36  Identities=28%  Similarity=0.383  Sum_probs=33.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|.++.+
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~   50 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYA   50 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            588999999999998999999999999999988644

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.80  E-value=0.009  Score=52.71  Aligned_cols=59  Identities=17%  Similarity=0.234  Sum_probs=47.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhC-CC-EEEEEcCCCC-------------------C------HHhhhccCcEEEE
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKA-DA-TVTIVHSHTT-------------------D------PESIVREADIVIA  216 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~-~a-tVtv~~~~t~-------------------~------l~~~~~~aDivis  216 (229)
                      .++||+|+|.|+++.+|+.++..|+++ |+ +|+++.+...                   |      +.+.++..|+||.
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            367999999999999999999999999 98 8988765310                   1      2345667899999


Q ss_pred             ecCCCC
Q 027064          217 AAGQAM  222 (229)
Q Consensus       217 A~g~p~  222 (229)
                      ++|..+
T Consensus        98 ~Aa~~~  103 (344)
T 2gn4_A           98 AAALKH  103 (344)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            988654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.80  E-value=0.011  Score=50.33  Aligned_cols=56  Identities=20%  Similarity=0.323  Sum_probs=44.4

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------------------------CHHhhhccCcEEEE
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------------------------DPESIVREADIVIA  216 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------------------------~l~~~~~~aDivis  216 (229)
                      .++|+|.|+++.+|+.++..|+++|+.|+++.+...                              .+.+.++.+|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            578999999888999999999999999988766421                              12345677899999


Q ss_pred             ecCCCC
Q 027064          217 AAGQAM  222 (229)
Q Consensus       217 A~g~p~  222 (229)
                      ++|..+
T Consensus        84 ~a~~~~   89 (308)
T 1qyc_A           84 TVGSLQ   89 (308)
T ss_dssp             CCCGGG
T ss_pred             CCcchh
Confidence            987543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.80  E-value=0.016  Score=49.62  Aligned_cols=36  Identities=19%  Similarity=0.212  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++.||.++|.|++.-+|+.++..|+++|++|.++.+
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~   61 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGI   61 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeC
Confidence            578999999999998999999999999999998864

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=95.80  E-value=0.0089  Score=51.24  Aligned_cols=38  Identities=34%  Similarity=0.531  Sum_probs=34.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   65 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARH   65 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            36899999999999999999999999999999998764

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.80  E-value=0.024  Score=50.62  Aligned_cols=56  Identities=20%  Similarity=0.294  Sum_probs=44.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------------CHHhhhccCcEEEEe
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------------DPESIVREADIVIAA  217 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------------~l~~~~~~aDivisA  217 (229)
                      .+.++|+|||+|. ||.+++..|+..|. .|++++....                          +. +.++.||+||.+
T Consensus         5 m~~~kI~viGaG~-vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIia   82 (324)
T 3gvi_A            5 MARNKIALIGSGM-IGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVT   82 (324)
T ss_dssp             -CCCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEEC
T ss_pred             CcCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEc
Confidence            3567999999977 59999999998887 8888755321                          22 568899999999


Q ss_pred             cCCCC
Q 027064          218 AGQAM  222 (229)
Q Consensus       218 ~g~p~  222 (229)
                      +|.|.
T Consensus        83 ag~p~   87 (324)
T 3gvi_A           83 AGVPR   87 (324)
T ss_dssp             CSCCC
T ss_pred             cCcCC
Confidence            99764

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=95.80  E-value=0.015  Score=54.50  Aligned_cols=58  Identities=16%  Similarity=0.192  Sum_probs=45.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------------CCHHhhhcc---CcEEEEecCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------------TDPESIVRE---ADIVIAAAGQAM  222 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------------~~l~~~~~~---aDivisA~g~p~  222 (229)
                      ..+-++|.|||.|.+ |.+++..|.+.|.+|++.++..                  .++.+.++.   +|+||.++..+.
T Consensus        12 ~~~~~~IgvIGlG~M-G~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~   90 (480)
T 2zyd_A           12 HMSKQQIGVVGMAVM-GRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGA   90 (480)
T ss_dssp             ---CBSEEEECCSHH-HHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSS
T ss_pred             ccCCCeEEEEccHHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHH
Confidence            467789999999996 9999999999999999997742                  244455655   999999998653

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=95.79  E-value=0.015  Score=50.92  Aligned_cols=53  Identities=21%  Similarity=0.233  Sum_probs=42.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-----------------------------CCHHhhhccCcEEEEec
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-----------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-----------------------------~~l~~~~~~aDivisA~  218 (229)
                      .+|.|||.|.+ |..++..|.+.|..|+++++..                             .++.+.+..+|+||.++
T Consensus         5 mki~iiG~G~~-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v   83 (359)
T 1bg6_A            5 KTYAVLGLGNG-GHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   83 (359)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CeEEEECCCHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence            58999999985 9999999999999999986531                             13345567899999998


Q ss_pred             CCC
Q 027064          219 GQA  221 (229)
Q Consensus       219 g~p  221 (229)
                      +.+
T Consensus        84 ~~~   86 (359)
T 1bg6_A           84 PAI   86 (359)
T ss_dssp             CGG
T ss_pred             Cch
Confidence            754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.79  E-value=0.014  Score=49.83  Aligned_cols=38  Identities=11%  Similarity=0.220  Sum_probs=33.0

Q ss_pred             CCCCCeEEEEccchh--hhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNI--VGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~--VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      .++||.|+|.|++..  +|+.++..|+++|++|.++.+..
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~   62 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ   62 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence            578999999998744  79999999999999999986654

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=95.79  E-value=0.023  Score=50.11  Aligned_cols=54  Identities=13%  Similarity=0.088  Sum_probs=42.6

Q ss_pred             CCeEEEEccchhhhHH-HHHHHhhCCCEEEEEcCCCC-C----HH------------hhh--ccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLP-VSLLLLKADATVTIVHSHTT-D----PE------------SIV--READIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~p-la~~L~~~~atVtv~~~~t~-~----l~------------~~~--~~aDivisA~g~p  221 (229)
                      .|++.|||-|++ |.. +|.+|+++|+.|++++.+.. .    |.            +.+  ..+|.||...|.|
T Consensus         4 ~~~i~~iGiGg~-Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~   77 (326)
T 3eag_A            4 MKHIHIIGIGGT-FMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAK   77 (326)
T ss_dssp             CCEEEEESCCSH-HHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCC
T ss_pred             CcEEEEEEECHH-HHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcC
Confidence            589999999997 995 99999999999999988642 1    11            123  3689999888866

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=95.78  E-value=0.015  Score=49.58  Aligned_cols=53  Identities=25%  Similarity=0.347  Sum_probs=43.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC--------HHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD--------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~--------l~~~~~~aDivisA~g~p  221 (229)
                      ||+|.|+++.+|+.++..|+++|.+|+++.|+...        ..+.+..+|.||...|.+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~~d~vihla~~~   62 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPSCDAAVNLAGEN   62 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTEEEHHHHHHHCCCSCSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCeeecchhhHhhccCCCEEEEeccCc
Confidence            79999999999999999999999999998765321        124578899999988754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=95.77  E-value=0.011  Score=52.96  Aligned_cols=58  Identities=21%  Similarity=0.331  Sum_probs=44.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-----------------------CHHhhhccCcEEEEec
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-----------------------DPESIVREADIVIAAA  218 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-----------------------~l~~~~~~aDivisA~  218 (229)
                      +..+++|+|||+|. ||.+++..|+..+.  .+.+++....                       +..+.++.||+||.+.
T Consensus         6 ~~~~~kV~ViGaG~-vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~a   84 (326)
T 3vku_A            6 DKDHQKVILVGDGA-VGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITA   84 (326)
T ss_dssp             -CCCCEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECC
T ss_pred             cCCCCEEEEECCCH-HHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECC
Confidence            45689999999977 59999999998876  7888765210                       2246689999999999


Q ss_pred             CCCC
Q 027064          219 GQAM  222 (229)
Q Consensus       219 g~p~  222 (229)
                      |.|.
T Consensus        85 g~~~   88 (326)
T 3vku_A           85 GAPQ   88 (326)
T ss_dssp             CCC-
T ss_pred             CCCC
Confidence            9764

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=95.76  E-value=0.014  Score=54.25  Aligned_cols=54  Identities=26%  Similarity=0.343  Sum_probs=43.8

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC--------------------------------CCCHHhhhccCcE
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH--------------------------------TTDPESIVREADI  213 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~--------------------------------t~~l~~~~~~aDi  213 (229)
                      .-.+|.|||.|.+ |.|+|..|.+ |..|+++++.                                |.++.+.++.||+
T Consensus        35 ~~mkIaVIGlG~m-G~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDv  112 (432)
T 3pid_A           35 EFMKITISGTGYV-GLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADY  112 (432)
T ss_dssp             CCCEEEEECCSHH-HHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSE
T ss_pred             CCCEEEEECcCHH-HHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCE
Confidence            3469999999985 9999999987 9999998652                                1244566889999


Q ss_pred             EEEecCCC
Q 027064          214 VIAAAGQA  221 (229)
Q Consensus       214 visA~g~p  221 (229)
                      ||.|++.|
T Consensus       113 ViiaVPt~  120 (432)
T 3pid_A          113 VIIATPTD  120 (432)
T ss_dssp             EEECCCCE
T ss_pred             EEEeCCCc
Confidence            99999876

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.75  E-value=0.019  Score=47.21  Aligned_cols=55  Identities=18%  Similarity=0.260  Sum_probs=43.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------C------HHhhhc----cCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------D------PESIVR----EADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------~------l~~~~~----~aDivisA~g~p~  222 (229)
                      |+|+|.|+++-+|+.++..|+++|++|+++.+...        |      +.+.+.    ..|+||...|...
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~   74 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV   74 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCCCC
Confidence            68999999999999999999999999999876532        1      223333    7899999988654

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=95.75  E-value=0.021  Score=50.74  Aligned_cols=56  Identities=25%  Similarity=0.367  Sum_probs=45.0

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC-C--------------------------CHHhhhccCcEEEEe
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT-T--------------------------DPESIVREADIVIAA  217 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t-~--------------------------~l~~~~~~aDivisA  217 (229)
                      +.++|.|||+|. +|.+++..|+..|. .|++++... .                          +-.+.++.||+||.+
T Consensus         7 ~~~kv~ViGaG~-vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIia   85 (315)
T 3tl2_A            7 KRKKVSVIGAGF-TGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVIT   85 (315)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEe
Confidence            468999999977 59999999999998 899887651 0                          112568899999999


Q ss_pred             cCCCC
Q 027064          218 AGQAM  222 (229)
Q Consensus       218 ~g~p~  222 (229)
                      +|.|.
T Consensus        86 ag~p~   90 (315)
T 3tl2_A           86 AGIAR   90 (315)
T ss_dssp             CSCCC
T ss_pred             CCCCC
Confidence            99774

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.75  E-value=0.02  Score=49.40  Aligned_cols=35  Identities=20%  Similarity=0.256  Sum_probs=31.7

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++|+|.|+++.+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~   38 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNL   38 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence            47899999999999999999999999999998653

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=95.75  E-value=0.0098  Score=50.94  Aligned_cols=38  Identities=26%  Similarity=0.348  Sum_probs=34.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+..
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~   67 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKP   67 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            57899999999999899999999999999999987653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.72  E-value=0.022  Score=50.10  Aligned_cols=53  Identities=13%  Similarity=0.297  Sum_probs=41.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC--------------------------CCHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT--------------------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t--------------------------~~l~~~~~~aDivisA~g~  220 (229)
                      ++|+|||+|. ||.+++..|+..|. +|.+++...                          .+. +.++.||+||.++|.
T Consensus         3 ~kI~VIGaG~-vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~   80 (309)
T 1ur5_A            3 KKISIIGAGF-VGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA   80 (309)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC
Confidence            5899999977 69999999999886 877776422                          133 558899999999998


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      |.
T Consensus        81 p~   82 (309)
T 1ur5_A           81 PR   82 (309)
T ss_dssp             --
T ss_pred             CC
Confidence            75

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=95.71  E-value=0.013  Score=54.37  Aligned_cols=55  Identities=22%  Similarity=0.421  Sum_probs=43.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhC--CCEEEEEcCCC---------------------------------CCHHhhhccCc
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSHT---------------------------------TDPESIVREAD  212 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~--~atVtv~~~~t---------------------------------~~l~~~~~~aD  212 (229)
                      .+|.|||.|.+ |.++|..|++.  |.+|+++++..                                 .++.+.++.||
T Consensus         6 mkI~VIG~G~m-G~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD   84 (467)
T 2q3e_A            6 KKICCIGAGYV-GGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD   84 (467)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred             cEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence            58999999995 99999999998  78999987631                                 12334567899


Q ss_pred             EEEEecCCCCC
Q 027064          213 IVIAAAGQAMM  223 (229)
Q Consensus       213 ivisA~g~p~~  223 (229)
                      +||.+++.|.-
T Consensus        85 vViiaVptp~~   95 (467)
T 2q3e_A           85 LVFISVNTPTK   95 (467)
T ss_dssp             EEEECCCCCBC
T ss_pred             EEEEEcCCchh
Confidence            99999987753

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=95.71  E-value=0.0072  Score=50.74  Aligned_cols=37  Identities=27%  Similarity=0.390  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~   39 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN   39 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999889999999999999999998664

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.70  E-value=0.011  Score=49.14  Aligned_cols=37  Identities=22%  Similarity=0.340  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~   47 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRS   47 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCc
Confidence            5789999999999999999999999999999988763

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=95.70  E-value=0.016  Score=54.14  Aligned_cols=54  Identities=22%  Similarity=0.330  Sum_probs=43.9

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------------CCHHhhhccCc
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------------TDPESIVREAD  212 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------------~~l~~~~~~aD  212 (229)
                      ..+|+|||.|.+ |.|+|..|++.|.+|+++++..                                  .++.+.++.||
T Consensus         8 ~~~I~VIG~G~v-G~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD   86 (478)
T 2y0c_A            8 SMNLTIIGSGSV-GLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD   86 (478)
T ss_dssp             CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred             CceEEEECcCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence            369999999995 9999999999999999986521                                  12224567899


Q ss_pred             EEEEecCCC
Q 027064          213 IVIAAAGQA  221 (229)
Q Consensus       213 ivisA~g~p  221 (229)
                      +||.+++.|
T Consensus        87 vviiaVptp   95 (478)
T 2y0c_A           87 VQFIAVGTP   95 (478)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEeCCC
Confidence            999999887

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.69  E-value=0.019  Score=49.01  Aligned_cols=33  Identities=21%  Similarity=0.225  Sum_probs=30.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ||+|+|.|+++.+|+.++..|+++|++|+.+.+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r   33 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIR   33 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEe
Confidence            689999999999999999999999999987654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.68  E-value=0.012  Score=50.33  Aligned_cols=38  Identities=26%  Similarity=0.301  Sum_probs=34.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   61 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATT   61 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999999999999999999988664

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.68  E-value=0.015  Score=50.01  Aligned_cols=54  Identities=15%  Similarity=0.243  Sum_probs=43.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      ++|+|.|+++.+|+.++..|+++|++|+++.+...                         ++.+.++.+|+||.++|..
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~   90 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP   90 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence            68999999888999999999999999988866431                         1224567789999988754

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.68  E-value=0.026  Score=50.42  Aligned_cols=57  Identities=12%  Similarity=0.053  Sum_probs=41.6

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC------------------CCCHHhhhc-----cCcEEEEecCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH------------------TTDPESIVR-----EADIVIAAAGQA  221 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~------------------t~~l~~~~~-----~aDivisA~g~p  221 (229)
                      -.|.+|+|+|+++.||..+++++...||+|+.+-+.                  ..++.+.++     ..|++|.++|.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~  242 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV  242 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCch
Confidence            479999999997778999999999999987755331                  112222222     379999999875

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=95.67  E-value=0.0072  Score=50.65  Aligned_cols=38  Identities=26%  Similarity=0.389  Sum_probs=34.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~   42 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD   42 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            35789999999999989999999999999999998764

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=95.67  E-value=0.024  Score=53.26  Aligned_cols=54  Identities=24%  Similarity=0.281  Sum_probs=44.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhC-CC-EEEEEcCCCC----C---H--------------------------------Hh
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA-DA-TVTIVHSHTT----D---P--------------------------------ES  206 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~-~a-tVtv~~~~t~----~---l--------------------------------~~  206 (229)
                      ++|.|||.|.+ |.|+|..|++. |. +|+++++...    .   +                                .+
T Consensus        19 mkIaVIGlG~m-G~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~e   97 (478)
T 3g79_A           19 KKIGVLGMGYV-GIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFS   97 (478)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGG
T ss_pred             CEEEEECcCHH-HHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHH
Confidence            69999999995 99999999999 99 9999976533    0   0                                23


Q ss_pred             hhccCcEEEEecCCCC
Q 027064          207 IVREADIVIAAAGQAM  222 (229)
Q Consensus       207 ~~~~aDivisA~g~p~  222 (229)
                      .++.||+||.+++.|.
T Consensus        98 a~~~aDvViiaVptp~  113 (478)
T 3g79_A           98 RISELDAVTLAIQTPF  113 (478)
T ss_dssp             GGGGCSEEEECCCCCC
T ss_pred             HHhcCCEEEEecCCch
Confidence            4678999999999875

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=95.67  E-value=0.0073  Score=50.37  Aligned_cols=38  Identities=18%  Similarity=0.302  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.|+|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~   42 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN   42 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence            45789999999999999999999999999999988664

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=95.66  E-value=0.016  Score=50.96  Aligned_cols=52  Identities=21%  Similarity=0.307  Sum_probs=42.2

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEecCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA~g~  220 (229)
                      --++.|||.|.+ |.+++..|.+.|.+|+++++..                         .+..+ +..+|+||.++..
T Consensus        14 ~~kI~iIG~G~m-G~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~   90 (335)
T 1z82_A           14 EMRFFVLGAGSW-GTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV   90 (335)
T ss_dssp             CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG
T ss_pred             CCcEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH
Confidence            368999999996 9999999999999999997642                         12334 6789999999874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=95.66  E-value=0.01  Score=50.58  Aligned_cols=38  Identities=13%  Similarity=0.151  Sum_probs=32.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++.||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   49 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR   49 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            35789999999999999999999999999999998664

>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*

Probab=95.65  E-value=0.0078  Score=57.58  Aligned_cols=82  Identities=16%  Similarity=0.235  Sum_probs=68.5

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhh----CCC-------EEEEEcCC--------C------
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADA-------TVTIVHSH--------T------  201 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~----~~a-------tVtv~~~~--------t------  201 (229)
                      .-+|..|++.-|+-.+.+++.-++++.|+|.. |-.++.+|..    .|.       .+++|+++        .      
T Consensus       264 a~V~lAgllnAlki~gk~l~d~riv~~GAGaA-gigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k  342 (564)
T 1pj3_A          264 AAVALAGLLAAQKVISKPISEHKILFLGAGEA-ALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQ  342 (564)
T ss_dssp             HHHHHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTT
T ss_pred             HHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHH-HHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCcccchHHH
Confidence            35567899999999999999999999999998 9999999986    783       58999662        1      


Q ss_pred             ------------CCHHhhhc--cCcEEEEecCCCCCCCCCCC
Q 027064          202 ------------TDPESIVR--EADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       202 ------------~~l~~~~~--~aDivisA~g~p~~i~~~~v  229 (229)
                                  .+|.+.++  .+|++|-.++.|+.+++|||
T Consensus       343 ~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv  384 (564)
T 1pj3_A          343 EPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVI  384 (564)
T ss_dssp             GGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHH
T ss_pred             HHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHH
Confidence                        13667787  59999999999999998874

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.65  E-value=0.012  Score=50.26  Aligned_cols=32  Identities=16%  Similarity=0.411  Sum_probs=28.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+|.|||.|.+ |.+++..|.+.|.+|+++++.
T Consensus         4 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~r~   35 (316)
T 2ew2_A            4 MKIAIAGAGAM-GSRLGIMLHQGGNDVTLIDQW   35 (316)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSC
T ss_pred             CeEEEECcCHH-HHHHHHHHHhCCCcEEEEECC
Confidence            48999999985 999999999999999998763

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.64  E-value=0.028  Score=49.99  Aligned_cols=56  Identities=23%  Similarity=0.322  Sum_probs=43.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-------------------------CHHhhhccCcEEEEecC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-------------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-------------------------~l~~~~~~aDivisA~g  219 (229)
                      +.++|+|||+|. ||.+++..|...+. .|.+++....                         +..+.++.||+||.++|
T Consensus         4 ~~~kI~iiGaG~-vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag   82 (321)
T 3p7m_A            4 ARKKITLVGAGN-IGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAG   82 (321)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCS
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCC
Confidence            457999999877 59999999998887 8888755321                         11356889999999999


Q ss_pred             CCC
Q 027064          220 QAM  222 (229)
Q Consensus       220 ~p~  222 (229)
                      .|.
T Consensus        83 ~p~   85 (321)
T 3p7m_A           83 VPR   85 (321)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            774

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=95.63  E-value=0.0082  Score=50.52  Aligned_cols=37  Identities=19%  Similarity=0.309  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   38 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL   38 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999889999999999999999988664

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=95.61  E-value=0.013  Score=46.13  Aligned_cols=53  Identities=19%  Similarity=0.178  Sum_probs=43.6

Q ss_pred             CCeEEEEccc---hhhhHHHHHHHhhCCCEEEEEcCCC-----------CCHHhhhccCcEEEEecC
Q 027064          167 GKRAVVVGRS---NIVGLPVSLLLLKADATVTIVHSHT-----------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       167 gk~v~ViG~s---~~VG~pla~~L~~~~atVtv~~~~t-----------~~l~~~~~~aDivisA~g  219 (229)
                      -++|.|||.|   +..|.+++..|.+.|++|+.+|.+.           .++.+.....|++|.+++
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp   79 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN   79 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC
Confidence            3789999996   3469999999999999999888764           256666677899999987

>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1

Probab=95.60  E-value=0.02  Score=53.05  Aligned_cols=54  Identities=24%  Similarity=0.159  Sum_probs=45.3

Q ss_pred             CcccCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcC
Q 027064          145 LFLPCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHS  199 (229)
Q Consensus       145 ~~~PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~  199 (229)
                      ...+.|++|++..++    +.+.+++||+|+|.|.|+ ||.-++.+|.+.|++|. ++++
T Consensus       184 ~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~Gn-VG~~aa~~L~e~GakVVavsD~  242 (421)
T 1v9l_A          184 VREYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGN-VGRWTAYWLEKMGAKVIAVSDI  242 (421)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSH-HHHHHHHHHHTTTCEEEEEECS
T ss_pred             CcccchHHHHHHHHHHHHHhcCCCcCCCEEEEECcCH-HHHHHHHHHHHCCCEEEEEECC
Confidence            345789999886654    568899999999999998 69999999999999866 7766

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.60  E-value=0.014  Score=46.82  Aligned_cols=56  Identities=14%  Similarity=0.169  Sum_probs=42.7

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-----------CHHh--hhcc--CcEEEEecCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-----------DPES--IVRE--ADIVIAAAGQA  221 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-----------~l~~--~~~~--aDivisA~g~p  221 (229)
                      .+++|+|.|+++.+|+.++..|+++|+  +|+.+.+...           |+.+  .+.+  .|+||.++|..
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~~~   76 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   76 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhhhcEEEECeeec
Confidence            478999999999999999999999998  9988766431           2221  1222  79999998854

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=95.59  E-value=0.008  Score=50.78  Aligned_cols=37  Identities=27%  Similarity=0.461  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~   41 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN   41 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999998764

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=95.59  E-value=0.0094  Score=51.05  Aligned_cols=37  Identities=27%  Similarity=0.270  Sum_probs=31.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   61 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR   61 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            3679999999999889999999999999999998664

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=95.59  E-value=0.015  Score=49.74  Aligned_cols=52  Identities=19%  Similarity=0.211  Sum_probs=41.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhC--CCEEEEEcCCC----------------CCHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSHT----------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~--~atVtv~~~~t----------------~~l~~~~~~aDivisA~g~  220 (229)
                      ++|.|||.|.+ |.+++..|.+.  +.+|+++++..                .++.+.+.++|+||.|++.
T Consensus         7 ~~I~iIG~G~m-G~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~   76 (290)
T 3b1f_A            7 KTIYIAGLGLI-GASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPI   76 (290)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCH
T ss_pred             ceEEEEeeCHH-HHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCH
Confidence            68999999996 99999999887  57899887631                2344567889999999863

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.58  E-value=0.023  Score=48.34  Aligned_cols=55  Identities=15%  Similarity=0.262  Sum_probs=44.6

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------------------CHHhhhccCcEEEEe
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------------------DPESIVREADIVIAA  217 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------------------~l~~~~~~aDivisA  217 (229)
                      .++|+|.|+++.+|+.++..|+++|++|+++.+...                             ++.+.++.+|+||.+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            478999999888999999999999999998866521                             133557788999999


Q ss_pred             cCCC
Q 027064          218 AGQA  221 (229)
Q Consensus       218 ~g~p  221 (229)
                      +|..
T Consensus        84 a~~~   87 (313)
T 1qyd_A           84 LAGG   87 (313)
T ss_dssp             CCCS
T ss_pred             Cccc
Confidence            8854

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=95.58  E-value=0.016  Score=50.92  Aligned_cols=51  Identities=10%  Similarity=0.184  Sum_probs=42.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC----CEEEEEcCCCC----------------CHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD----ATVTIVHSHTT----------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~----atVtv~~~~t~----------------~l~~~~~~aDivisA~g  219 (229)
                      .+|.|||.|.+ |.+++..|.+.|    ..|+++++...                +..+.++.+|+||.|+.
T Consensus        23 mkI~iIG~G~m-G~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~   93 (322)
T 2izz_A           23 MSVGFIGAGQL-AFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK   93 (322)
T ss_dssp             CCEEEESCSHH-HHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC
T ss_pred             CEEEEECCCHH-HHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC
Confidence            57999999996 999999999998    68999987532                34456778999999986

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=95.58  E-value=0.018  Score=50.38  Aligned_cols=52  Identities=21%  Similarity=0.144  Sum_probs=39.0

Q ss_pred             cCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          148 PCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       148 PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ||.+..++..+.+..---.|++|+|+|+++.+|..+++++...|++|+.+.+
T Consensus       130 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~  181 (334)
T 3qwb_A          130 LLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS  181 (334)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES
T ss_pred             hhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            4444555556655433347999999996666799999999999999887755

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.57  E-value=0.018  Score=48.55  Aligned_cols=54  Identities=9%  Similarity=0.063  Sum_probs=41.7

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhh----------------hccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESI----------------VREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~----------------~~~aDivisA~g~p  221 (229)
                      .++|+|.|+ +.+|+.++..|+++|++|+.+.+........                +..+|+||.++|..
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~   74 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAPD   74 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCCB
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCcc
Confidence            379999998 6689999999999999999887654322110                56789999988743

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=95.57  E-value=0.014  Score=48.01  Aligned_cols=37  Identities=27%  Similarity=0.310  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~   40 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT   40 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999988654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=95.55  E-value=0.023  Score=49.19  Aligned_cols=33  Identities=21%  Similarity=0.372  Sum_probs=30.2

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +|+|+|.|+++.+|+.++..|+++|++|+++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r   34 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN   34 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence            589999999999999999999999999998754

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=95.55  E-value=0.007  Score=50.23  Aligned_cols=37  Identities=19%  Similarity=0.304  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~   47 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT   47 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence            4789999999999999999999999999999988653

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=95.55  E-value=0.031  Score=49.65  Aligned_cols=52  Identities=23%  Similarity=0.114  Sum_probs=38.3

Q ss_pred             cCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          148 PCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       148 PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ||.+..++..|.+..---.|++|+|.|+++.+|..+++++...|++|+.+.+
T Consensus       145 ~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~  196 (362)
T 2c0c_A          145 LVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS  196 (362)
T ss_dssp             TTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES
T ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC
Confidence            4444455555555433347999999997666799999999999999887754

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=95.55  E-value=0.019  Score=53.75  Aligned_cols=51  Identities=12%  Similarity=0.263  Sum_probs=42.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-----------------------------------CCHHhhhccCc
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-----------------------------------TDPESIVREAD  212 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-----------------------------------~~l~~~~~~aD  212 (229)
                      ++|.|||.|.+ |.++|..|++.|..|+++++..                                   .++ +.+++||
T Consensus        55 ~kVaVIGaG~M-G~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aD  132 (460)
T 3k6j_A           55 NSVAIIGGGTM-GKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF-HKLSNCD  132 (460)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-GGCTTCS
T ss_pred             CEEEEECCCHH-HHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-HHHccCC
Confidence            79999999996 9999999999999999987632                                   123 3578899


Q ss_pred             EEEEecCC
Q 027064          213 IVIAAAGQ  220 (229)
Q Consensus       213 ivisA~g~  220 (229)
                      +||.|+..
T Consensus       133 lVIeAVpe  140 (460)
T 3k6j_A          133 LIVESVIE  140 (460)
T ss_dssp             EEEECCCS
T ss_pred             EEEEcCCC
Confidence            99999863

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.54  E-value=0.021  Score=46.84  Aligned_cols=36  Identities=19%  Similarity=0.265  Sum_probs=32.3

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCC--CEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~  200 (229)
                      ++||+|+|.|++.-+|+.++..|+++|  ++|+++.+.
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~   38 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD   38 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence            368999999999999999999999999  999988654

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=95.53  E-value=0.023  Score=47.98  Aligned_cols=52  Identities=13%  Similarity=0.101  Sum_probs=41.2

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---------------------HHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---------------------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---------------------l~~~~~~aDivisA~g~p  221 (229)
                      +|.|||.|.+ |.+++..|.+.|.+|+++++....                     ..+.+..+|+||.+++.+
T Consensus         2 ~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~   74 (291)
T 1ks9_A            2 KITVLGCGAL-GQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW   74 (291)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG
T ss_pred             eEEEECcCHH-HHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH
Confidence            7999999985 999999999999999998764321                     123456789999998754

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.53  E-value=0.0068  Score=51.55  Aligned_cols=37  Identities=22%  Similarity=0.213  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~   63 (281)
T 3ppi_A           27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLA   63 (281)
T ss_dssp             GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999998764

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=95.52  E-value=0.03  Score=48.58  Aligned_cols=36  Identities=25%  Similarity=0.366  Sum_probs=31.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++++|+|.|+++.+|+.++..|+++|++|+++.+.
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   60 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   60 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            468999999999999999999999999999988653

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.52  E-value=0.029  Score=49.24  Aligned_cols=52  Identities=25%  Similarity=0.379  Sum_probs=40.9

Q ss_pred             eEEEEccchhhhHHHHHHHhhC--CCEEEEEcCCCC--------------------------CHHhhhccCcEEEEecCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSHTT--------------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~--~atVtv~~~~t~--------------------------~l~~~~~~aDivisA~g~  220 (229)
                      +|+|||.|. +|.+++..|...  +..|+++++...                          +..+ ++.||+||.++|.
T Consensus         2 kI~VIGaG~-vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~   79 (310)
T 1guz_A            2 KITVIGAGN-VGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL   79 (310)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred             EEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence            799999977 599999999885  678998865321                          2323 7889999999997


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      |.
T Consensus        80 p~   81 (310)
T 1guz_A           80 PR   81 (310)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=95.52  E-value=0.014  Score=51.11  Aligned_cols=54  Identities=19%  Similarity=0.134  Sum_probs=41.0

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+||....++..|.+..---.|++|+|.|++.-+|..+++++...|++|+.+.+
T Consensus       129 ~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~  182 (336)
T 4b7c_A          129 ALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG  182 (336)
T ss_dssp             TTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             hcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            345555666667744433347999999999666799999999999999988764

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=95.52  E-value=0.033  Score=48.82  Aligned_cols=51  Identities=18%  Similarity=0.182  Sum_probs=40.1

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +||....++..|+..++ -.|.+|+|+|+|. ||..+++++...|++|+.+.+
T Consensus       148 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~Vi~~~~  198 (340)
T 3s2e_A          148 ILCAGVTVYKGLKVTDT-RPGQWVVISGIGG-LGHVAVQYARAMGLRVAAVDI  198 (340)
T ss_dssp             GGTHHHHHHHHHHTTTC-CTTSEEEEECCST-THHHHHHHHHHTTCEEEEEES
T ss_pred             ccchhHHHHHHHHHcCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeC
Confidence            56666666777765543 3799999999977 699999999999999888754

>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}

Probab=95.51  E-value=0.012  Score=54.56  Aligned_cols=55  Identities=22%  Similarity=0.186  Sum_probs=45.9

Q ss_pred             CcccCCHHHHHHHH----HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcCC
Q 027064          145 LFLPCTPKGCLELL----KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHSH  200 (229)
Q Consensus       145 ~~~PcTa~av~~lL----~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~~  200 (229)
                      ...+.|.+|++..+    ++.+.+++|++|+|.|.|+ ||..++.+|.+.|++|. ++++.
T Consensus       186 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~Gn-VG~~~a~~L~~~GakvVavsD~~  245 (421)
T 2yfq_A          186 GRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGN-VGTFTVKNIERQGGKVCAIAEWD  245 (421)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEECCSH-HHHHHHHHHHHTTCCEEECCBCC
T ss_pred             CCCcchHHHHHHHHHHHHHhcCCCccCCEEEEECcCH-HHHHHHHHHHHCCCEEEEEEecC
Confidence            34478999888664    4568899999999999999 59999999999999866 77766

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=95.51  E-value=0.014  Score=54.13  Aligned_cols=57  Identities=25%  Similarity=0.368  Sum_probs=43.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------CHHhh---------------hccCcEE
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------DPESI---------------VREADIV  214 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~l~~~---------------~~~aDiv  214 (229)
                      -.|.+.+|||.|- ||.|+|..|++.|.+|++.++...               .+.++               ++.||+|
T Consensus         9 ~~~~~~~ViGlGy-vGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvv   87 (431)
T 3ojo_A            9 HHGSKLTVVGLGY-IGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVF   87 (431)
T ss_dssp             ---CEEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEE
T ss_pred             ccCCccEEEeeCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEE
Confidence            3588999999999 599999999999999999976321               12211               3579999


Q ss_pred             EEecCCCC
Q 027064          215 IAAAGQAM  222 (229)
Q Consensus       215 isA~g~p~  222 (229)
                      |.++|.|.
T Consensus        88 ii~VpTp~   95 (431)
T 3ojo_A           88 IIAVPTPN   95 (431)
T ss_dssp             EECCCCCB
T ss_pred             EEEeCCCc
Confidence            99999885

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=95.51  E-value=0.016  Score=50.64  Aligned_cols=52  Identities=13%  Similarity=-0.048  Sum_probs=39.8

Q ss_pred             cCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          148 PCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       148 PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ||.+..+...+.+..---.|++|+|.|+++.+|..+++++...|++|+.+.+
T Consensus       122 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~  173 (325)
T 3jyn_A          122 MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS  173 (325)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred             hhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            5556666666665543347999999996666799999999999999887754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=95.51  E-value=0.0093  Score=50.51  Aligned_cols=38  Identities=34%  Similarity=0.399  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~   41 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD   41 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            36889999999999889999999999999999988653

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=95.51  E-value=0.039  Score=45.73  Aligned_cols=34  Identities=24%  Similarity=0.346  Sum_probs=31.4

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ||+++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~   35 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRN   35 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            7899999999999999999999999999988664

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=95.50  E-value=0.018  Score=49.73  Aligned_cols=59  Identities=20%  Similarity=0.415  Sum_probs=45.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCC-------CEEEEEcCCCC---------------C------HHhhh-ccCcE
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKAD-------ATVTIVHSHTT---------------D------PESIV-READI  213 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~-------atVtv~~~~t~---------------~------l~~~~-~~aDi  213 (229)
                      ..+.|++|+|.|+++.+|+.++..|+++|       ++|+++.+...               |      +.+.+ ...|+
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~   89 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDV   89 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence            35789999999999999999999999999       78888765421               1      22334 37899


Q ss_pred             EEEecCCC
Q 027064          214 VIAAAGQA  221 (229)
Q Consensus       214 visA~g~p  221 (229)
                      ||..+|..
T Consensus        90 vih~A~~~   97 (342)
T 2hrz_A           90 IFHLAAIV   97 (342)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99988754

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=95.49  E-value=0.009  Score=50.96  Aligned_cols=38  Identities=26%  Similarity=0.355  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   44 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN   44 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999999999999999999999999988653

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.49  E-value=0.028  Score=46.74  Aligned_cols=55  Identities=15%  Similarity=0.175  Sum_probs=43.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------C------HHhhhcc----CcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------D------PESIVRE----ADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------~------l~~~~~~----aDivisA~g~p~  222 (229)
                      |.++|.|++.-+|+.++..|+++|++|+++.+...        |      +.+.+++    -|++|...|...
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence            67999999999999999999999999999876532        2      2233433    499999998654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.49  E-value=0.016  Score=48.06  Aligned_cols=37  Identities=19%  Similarity=0.364  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~   44 (254)
T 2wsb_A            8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDRE   44 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999988664

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=95.48  E-value=0.01  Score=51.47  Aligned_cols=38  Identities=16%  Similarity=0.354  Sum_probs=34.7

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.|+|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~   74 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARS   74 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            46899999999999999999999999999999998664

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=95.48  E-value=0.021  Score=51.94  Aligned_cols=51  Identities=33%  Similarity=0.457  Sum_probs=41.5

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------------------------CCHHhhhccCcEEEE
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------------------------TDPESIVREADIVIA  216 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------------------------~~l~~~~~~aDivis  216 (229)
                      +|.|||.|. ||.+++..|++ |.+|+++++..                                .+..+.++.||+||.
T Consensus         2 kI~VIG~G~-vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii   79 (402)
T 1dlj_A            2 KIAVAGSGY-VGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII   79 (402)
T ss_dssp             EEEEECCSH-HHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred             EEEEECCCH-HHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence            789999998 59999999998 99999986531                                123355678999999


Q ss_pred             ecCCC
Q 027064          217 AAGQA  221 (229)
Q Consensus       217 A~g~p  221 (229)
                      +++.|
T Consensus        80 avpt~   84 (402)
T 1dlj_A           80 ATPTN   84 (402)
T ss_dssp             CCCCC
T ss_pred             ecCCC
Confidence            99887

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=95.48  E-value=0.015  Score=49.12  Aligned_cols=53  Identities=21%  Similarity=0.253  Sum_probs=41.0

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------C------HHhhhcc-CcEEEEecC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------D------PESIVRE-ADIVIAAAG  219 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------~------l~~~~~~-aDivisA~g  219 (229)
                      ++++|+|.|+ +.+|+.++..|+++|++|+.+.+...           |      +.+.++. .|+||.+.|
T Consensus         2 ~~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~   72 (286)
T 3gpi_A            2 SLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA   72 (286)
T ss_dssp             CCCCEEEECC-SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence            4689999996 56799999999999999998866521           1      2234555 899998776

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=95.48  E-value=0.01  Score=50.92  Aligned_cols=38  Identities=18%  Similarity=0.236  Sum_probs=34.5

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.|+|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~   49 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRD   49 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            36889999999999999999999999999999988664

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.48  E-value=0.019  Score=47.94  Aligned_cols=35  Identities=26%  Similarity=0.294  Sum_probs=31.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +.||.++|.|.+.-+|+.++..|+++|++|.++.+
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~   36 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYA   36 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            46899999999999999999999999999988755

>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A

Probab=95.48  E-value=0.016  Score=53.71  Aligned_cols=54  Identities=20%  Similarity=0.327  Sum_probs=45.6

Q ss_pred             cccCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEE-EEEcCC
Q 027064          146 FLPCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATV-TIVHSH  200 (229)
Q Consensus       146 ~~PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atV-tv~~~~  200 (229)
                      -.+.|.+|+...++.    .+.+++||+|+|-|.|+ ||..++.+|.+.|++| +++++.
T Consensus       196 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~Gn-VG~~aa~~l~e~GakVVavsD~~  254 (424)
T 3k92_A          196 RETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGN-AGSFLAKFMHDAGAKVIGISDAN  254 (424)
T ss_dssp             TTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSH-HHHHHHHHHHHHTCEEEEEECSS
T ss_pred             CcccHHHHHHHHHHHHHHHcCCCcccCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCC
Confidence            347899998776654    58899999999999999 6999999999999985 677765

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.48  E-value=0.0071  Score=51.22  Aligned_cols=37  Identities=22%  Similarity=0.439  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   43 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS   43 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999988653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=95.46  E-value=0.035  Score=49.45  Aligned_cols=38  Identities=21%  Similarity=0.295  Sum_probs=34.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.|+|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~   78 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKT   78 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECC
Confidence            36899999999999989999999999999999998664

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.43  E-value=0.027  Score=48.38  Aligned_cols=36  Identities=22%  Similarity=0.194  Sum_probs=30.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -.+++|+|.|+++.+|+.++..|+++|++|+++.+.
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~   47 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVAR   47 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence            368999999999999999999999999999988664

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=95.43  E-value=0.012  Score=52.16  Aligned_cols=50  Identities=26%  Similarity=0.392  Sum_probs=40.9

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------CCHHhhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------~~l~~~~~~aDivisA~g  219 (229)
                      +|.|||.|.+ |.+++..|.+.|..|+++++..                            .+..+.+..+|+||.++.
T Consensus        17 kI~iIG~G~m-G~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~   94 (366)
T 1evy_A           17 KAVVFGSGAF-GTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIP   94 (366)
T ss_dssp             EEEEECCSHH-HHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCC
T ss_pred             eEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCC
Confidence            8999999995 9999999999999999987631                            133455678999999886

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=95.42  E-value=0.0099  Score=50.93  Aligned_cols=37  Identities=16%  Similarity=0.319  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   38 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKS   38 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            4789999999999999999999999999999998764

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=95.41  E-value=0.01  Score=49.89  Aligned_cols=37  Identities=19%  Similarity=0.308  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   45 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRN   45 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999989999999999999999988653

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=95.41  E-value=0.025  Score=52.59  Aligned_cols=32  Identities=19%  Similarity=0.322  Sum_probs=29.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|.|||.|.+ |.++|..|++.|..|+++++.
T Consensus        38 ~kV~VIGaG~M-G~~iA~~la~~G~~V~l~D~~   69 (463)
T 1zcj_A           38 SSVGVLGLGTM-GRGIAISFARVGISVVAVESD   69 (463)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHTTTCEEEEECSS
T ss_pred             CEEEEECcCHH-HHHHHHHHHhCCCeEEEEECC
Confidence            68999999996 999999999999999998753

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.40  E-value=0.011  Score=48.54  Aligned_cols=52  Identities=13%  Similarity=0.275  Sum_probs=40.2

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------------C---HHh-hhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------------D---PES-IVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------------~---l~~-~~~~aDivisA~g~p  221 (229)
                      +|+|+|.|. +|+.++..|.++|..|+++.+...                   +   +.+ .+.+||+||.+++..
T Consensus         2 ~iiIiG~G~-~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGGET-TAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECCHH-HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECCCH-HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc
Confidence            689999988 599999999999999999865321                   1   112 267899999998753

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.40  E-value=0.015  Score=47.93  Aligned_cols=34  Identities=29%  Similarity=0.426  Sum_probs=31.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~   35 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLN   35 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            3679999999999999999999999999999988

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=95.38  E-value=0.016  Score=50.15  Aligned_cols=58  Identities=14%  Similarity=0.280  Sum_probs=42.3

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCC--C-------------------C------HHhhhcc--CcE
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHT--T-------------------D------PESIVRE--ADI  213 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t--~-------------------~------l~~~~~~--aDi  213 (229)
                      ..+++|+|.|+++.+|+.++..|+++|  .+|+...+..  .                   |      +.+.++.  .|+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            568999999999999999999999998  5677665432  0                   1      2244555  899


Q ss_pred             EEEecCCCC
Q 027064          214 VIAAAGQAM  222 (229)
Q Consensus       214 visA~g~p~  222 (229)
                      ||.++|..+
T Consensus       102 Vih~A~~~~  110 (346)
T 4egb_A          102 IVNFAAESH  110 (346)
T ss_dssp             EEECCCCC-
T ss_pred             EEECCcccc
Confidence            999988654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=95.38  E-value=0.018  Score=47.88  Aligned_cols=37  Identities=27%  Similarity=0.384  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~   46 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLD   46 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999988653

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=95.37  E-value=0.017  Score=48.76  Aligned_cols=32  Identities=28%  Similarity=0.334  Sum_probs=30.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      +||.++|.|++.-+|+.++..|+++|++|.++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~   34 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVIN   34 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEE
Confidence            68999999999989999999999999999886

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=95.37  E-value=0.0082  Score=50.63  Aligned_cols=37  Identities=24%  Similarity=0.296  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   39 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRT   39 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999889999999999999999988664

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.36  E-value=0.017  Score=51.87  Aligned_cols=52  Identities=17%  Similarity=0.202  Sum_probs=42.1

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhcc----CcEEEEecC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVRE----ADIVIAAAG  219 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~----aDivisA~g  219 (229)
                      -++|.|||.|.+ |.+++..|.+.|.+|+++++..              .++.+.+++    +|+||.|++
T Consensus         8 ~~kIgIIG~G~m-G~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP   77 (341)
T 3ktd_A            8 SRPVCILGLGLI-GGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVP   77 (341)
T ss_dssp             SSCEEEECCSHH-HHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSC
T ss_pred             CCEEEEEeecHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCC
Confidence            368999999996 9999999999999999998742              244455554    699999987

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=95.35  E-value=0.015  Score=51.95  Aligned_cols=32  Identities=13%  Similarity=0.146  Sum_probs=28.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC-------CEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD-------ATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~-------atVtv~~~~  200 (229)
                      ++|.|||.|.+ |.+++..|.+.|       .+|+++++.
T Consensus        22 ~kI~iIGaG~m-G~alA~~L~~~G~~~~~~~~~V~~~~r~   60 (375)
T 1yj8_A           22 LKISILGSGNW-ASAISKVVGTNAKNNYLFENEVRMWIRD   60 (375)
T ss_dssp             BCEEEECCSHH-HHHHHHHHHHHHHHCTTBCSCEEEECCS
T ss_pred             CEEEEECcCHH-HHHHHHHHHHcCCccCCCCCeEEEEECC
Confidence            57999999995 999999999888       899998764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.35  E-value=0.021  Score=48.17  Aligned_cols=35  Identities=14%  Similarity=0.197  Sum_probs=30.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      ++.||.++|.|++.-+|+.++..|+++|++|.++.
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~   57 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHY   57 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence            46899999999999999999999999999987653

>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}

Probab=95.34  E-value=0.11  Score=47.80  Aligned_cols=153  Identities=18%  Similarity=0.179  Sum_probs=94.4

Q ss_pred             cHHHHHHHHHHHHHcCCeeeeecCCCCCCH----HHHHHHHHHhcCCCCCcEEEEeCCC---CCCCCHHHHHhcCCccCc
Q 027064           53 SQSYVSMKRKACAEVGIKSFDIDLPEQVSE----AELISKVHELNVMPDVHGILVQLPL---PKHINEEKVLGEISLEKD  125 (229)
Q Consensus        53 s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~----~el~~~I~~lN~d~~v~GIlvq~Pl---p~~i~~~~i~~~I~p~KD  125 (229)
                      |..---+=.-++..+|..+.++.-  +.++    |-+.+.++-|..-  +|+|.+--|.   ..|-...++.+....  +
T Consensus        74 STRTR~SFE~A~~~LGg~~i~l~~--~~ssl~kGEsl~DTarvLs~y--~D~IviRh~~~~g~~~~~~~~la~~~~~--~  147 (399)
T 3q98_A           74 STRTRFSYASALNLLGLAQQDLDE--GKSQIAHGETVRETANMISFC--ADAIGIRDDMYLGAGNAYMREVGAALDD--G  147 (399)
T ss_dssp             ----CCHHHHHHHHHTCEEEECC---------CCTTHHHHHHHTCTT--EEEEEEEECCCCCC---HHHHHHHHHHH--H
T ss_pred             ChhHHHHHHHHHHHcCCeEEEeCC--ccccCCCCCCHHHHHHHHHhh--CcEEEEeccccCCcchHHHHHHHHHhhh--h
Confidence            433333456788999999877642  2222    6688888888765  8999999874   222222333322100  0


Q ss_pred             -cccc-----CccchhhhhccCCCCCcccCCHHHH-HHHHHHhCC--CCCCCeEEEE-------ccchhhhHHHHHHHhh
Q 027064          126 -VDGF-----HPLNIGKLAMKGRDPLFLPCTPKGC-LELLKRSGV--TIKGKRAVVV-------GRSNIVGLPVSLLLLK  189 (229)
Q Consensus       126 -VDg~-----~~~N~g~l~~~~~~~~~~PcTa~av-~~lL~~~~~--~l~gk~v~Vi-------G~s~~VG~pla~~L~~  189 (229)
                       -+|+     --+|.|    +   ..+.||=+.+= +.+.|+.|-  .++|++|+++       |++..|.+.++..|..
T Consensus       148 ~~~~v~~~~~PVINal----~---d~~HPtQaLaDl~TI~E~~G~~~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~  220 (399)
T 3q98_A          148 YKQGVLPQRPALVNLQ----C---DIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTR  220 (399)
T ss_dssp             HHTTSCSSCCEEEEEE----C---SSCCHHHHHHHHHHHHHHHSSSGGGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGG
T ss_pred             cccccccCCCcEEeCC----C---CCcCcHHHHHHHHHHHHHhCCccccCCCEEEEEEecccccCcchHHHHHHHHHHHH
Confidence             0111     134442    2   35679988874 455666663  3789999998       5666789999999999


Q ss_pred             CCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          190 ADATVTIVHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       190 ~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      -|++|++|.-..                         .++.+.++.||+|.+-+
T Consensus       221 lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~aDvVytd~  274 (399)
T 3q98_A          221 FGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKS  274 (399)
T ss_dssp             GTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred             cCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEecC
Confidence            999999885431                         25567789999998764

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=95.34  E-value=0.022  Score=50.40  Aligned_cols=75  Identities=21%  Similarity=0.226  Sum_probs=50.3

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------CCHHhh
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------TDPESI  207 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------~~l~~~  207 (229)
                      +||....++..|.+..---.|++|+|.|.++.+|..++.++...||+|+.+.+..                   .+..+.
T Consensus       148 l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~  227 (353)
T 4dup_A          148 LPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAV  227 (353)
T ss_dssp             SHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHH
T ss_pred             hhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHH
Confidence            3444445555553333234799999997666679999999999999988875422                   122222


Q ss_pred             hc-----cCcEEEEecCCC
Q 027064          208 VR-----EADIVIAAAGQA  221 (229)
Q Consensus       208 ~~-----~aDivisA~g~p  221 (229)
                      ++     ..|++|.++|.+
T Consensus       228 ~~~~~~~g~Dvvid~~g~~  246 (353)
T 4dup_A          228 IKAETGQGVDIILDMIGAA  246 (353)
T ss_dssp             HHHHHSSCEEEEEESCCGG
T ss_pred             HHHHhCCCceEEEECCCHH
Confidence            22     479999998865

>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A

Probab=95.33  E-value=0.033  Score=51.50  Aligned_cols=56  Identities=23%  Similarity=0.183  Sum_probs=46.0

Q ss_pred             CCcccCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhh-CCCEEE-EEcCC
Q 027064          144 PLFLPCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLK-ADATVT-IVHSH  200 (229)
Q Consensus       144 ~~~~PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~-~~atVt-v~~~~  200 (229)
                      ....+.|++|++..++    +.+.+++|++|+|.|.|+ ||..++.+|.+ .|++|. ++++.
T Consensus       182 ~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~Gn-VG~~~a~~L~e~~GakvVavsD~~  243 (415)
T 2tmg_A          182 KGREEATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGN-VGQFAALLISQELGSKVVAVSDSR  243 (415)
T ss_dssp             TTTTTHHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSH-HHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             CCcCcchHHHHHHHHHHHHHHcCCCcCCCEEEEECCcH-HHHHHHHHHHHhcCCEEEEEEeCC
Confidence            3445789999886654    578899999999999999 59999999999 999865 77663

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=95.33  E-value=0.021  Score=46.45  Aligned_cols=50  Identities=18%  Similarity=0.302  Sum_probs=39.6

Q ss_pred             eEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecC
Q 027064          169 RAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g  219 (229)
                      ++.|+| .|. +|..++..|.+.|.+|+++++...                     ++.+.++.+|+||.+++
T Consensus         2 ~i~iiGa~G~-~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            2 RVALLGGTGN-LGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             EEEEETTTSH-HHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSC
T ss_pred             eEEEEcCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCC
Confidence            689999 666 599999999999999999876421                     12345678999999986

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=95.33  E-value=0.0086  Score=49.82  Aligned_cols=38  Identities=29%  Similarity=0.468  Sum_probs=34.7

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||+|+|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~   47 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN   47 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence            46789999999999999999999999999999998764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=95.33  E-value=0.019  Score=48.83  Aligned_cols=39  Identities=23%  Similarity=0.375  Sum_probs=34.6

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..++.||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~   54 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN   54 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            356889999999999999999999999999999988653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=95.31  E-value=0.011  Score=51.21  Aligned_cols=37  Identities=22%  Similarity=0.371  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.|+|.|+|.-+|+.++..|+++|++|.++.+.
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~   64 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVD   64 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4789999999999999999999999999999988664

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=95.31  E-value=0.019  Score=48.21  Aligned_cols=37  Identities=32%  Similarity=0.464  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ   40 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            5789999999999999999999999999999988653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=95.30  E-value=0.019  Score=48.23  Aligned_cols=38  Identities=21%  Similarity=0.344  Sum_probs=33.1

Q ss_pred             CCCCCCeEEEEccchh--hhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNI--VGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~--VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|+++.  +|+.++..|+++|++|+++.+.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~   42 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG   42 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence            3578999999999855  8999999999999999988553

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=95.30  E-value=0.029  Score=48.68  Aligned_cols=55  Identities=24%  Similarity=0.234  Sum_probs=43.7

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCC-----CEEEEEcCCCC--------------C------HHhhhcc---CcEEEEec
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKAD-----ATVTIVHSHTT--------------D------PESIVRE---ADIVIAAA  218 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~-----atVtv~~~~t~--------------~------l~~~~~~---aDivisA~  218 (229)
                      |++|+|.|+++.+|+.++..|+++|     ++|+.+.+...              |      +.+.++.   .|+||.++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a   80 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT   80 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence            5899999999999999999999999     89998865421              1      2244555   89999988


Q ss_pred             CCC
Q 027064          219 GQA  221 (229)
Q Consensus       219 g~p  221 (229)
                      |..
T Consensus        81 ~~~   83 (364)
T 2v6g_A           81 WAN   83 (364)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.30  E-value=0.021  Score=48.59  Aligned_cols=38  Identities=29%  Similarity=0.466  Sum_probs=34.7

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   39 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKS   39 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEecc
Confidence            36789999999999999999999999999999988665

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=95.30  E-value=0.034  Score=47.71  Aligned_cols=54  Identities=17%  Similarity=0.292  Sum_probs=42.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------C------HHhhhc--cCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------D------PESIVR--EADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~------l~~~~~--~aDivisA~g~p  221 (229)
                      ++|+|.|+++.+|+.++..|+++|++|+++.+...               |      +.+.++  ..|+||.++|..
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~   78 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS   78 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence            68999999999999999999999999998865321               1      224455  689999988754

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.29  E-value=0.016  Score=48.19  Aligned_cols=34  Identities=35%  Similarity=0.423  Sum_probs=31.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      .++||.++|.|++.-+|+.++..|+++|++|.++
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~   37 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIH   37 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence            3689999999999889999999999999999875

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=95.29  E-value=0.017  Score=48.40  Aligned_cols=55  Identities=22%  Similarity=0.247  Sum_probs=44.5

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------C------HHhhhccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------D------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~------l~~~~~~aDivisA~g~p  221 (229)
                      +|+|+|.|+++.+|+.++..|+++|++|+++.+...            |      +.+.++..|+||.+.|..
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~   74 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVS   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcCC
Confidence            378999999999999999999999999998866431            1      335577889999998754

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=95.29  E-value=0.009  Score=50.65  Aligned_cols=38  Identities=29%  Similarity=0.421  Sum_probs=34.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~   43 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRR   43 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999889999999999999999988664

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=95.29  E-value=0.015  Score=50.12  Aligned_cols=38  Identities=26%  Similarity=0.420  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~   80 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLD   80 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999999999999999988654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=95.28  E-value=0.03  Score=47.31  Aligned_cols=54  Identities=20%  Similarity=0.366  Sum_probs=43.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----CC------HHhhhcc--CcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----TD------PESIVRE--ADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----~~------l~~~~~~--aDivisA~g~p~  222 (229)
                      ++|+|.|+++.+|+.++..|+ +|++|+.+.+..    -|      +.+.++.  .|+||.+.|...
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   66 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTA   66 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEECcccCC
Confidence            379999999999999999999 899999987653    12      3345655  899999988544

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.28  E-value=0.02  Score=47.83  Aligned_cols=37  Identities=19%  Similarity=0.276  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   38 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE   38 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3679999999999999999999999999999988664

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.28  E-value=0.017  Score=48.08  Aligned_cols=36  Identities=28%  Similarity=0.337  Sum_probs=29.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|.+ |+.|.++.+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~   37 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRN   37 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCC
Confidence            46799999999999999999999987 8998888664

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=95.28  E-value=0.02  Score=48.11  Aligned_cols=37  Identities=24%  Similarity=0.284  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   42 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN   42 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999988653

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=95.28  E-value=0.023  Score=53.09  Aligned_cols=54  Identities=26%  Similarity=0.441  Sum_probs=43.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhC--CCEEEEEcCCC---------------------------------CCHHhhhccCc
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSHT---------------------------------TDPESIVREAD  212 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~--~atVtv~~~~t---------------------------------~~l~~~~~~aD  212 (229)
                      .+|.|||.|.+ |.|+|..|++.  |.+|+++++..                                 .+..+.++.||
T Consensus        10 mkI~VIG~G~v-G~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aD   88 (481)
T 2o3j_A           10 SKVVCVGAGYV-GGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD   88 (481)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred             CEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence            58999999995 99999999988  68999987521                                 12234577899


Q ss_pred             EEEEecCCCC
Q 027064          213 IVIAAAGQAM  222 (229)
Q Consensus       213 ivisA~g~p~  222 (229)
                      +||.+++.|.
T Consensus        89 vvii~Vptp~   98 (481)
T 2o3j_A           89 LIFISVNTPT   98 (481)
T ss_dssp             EEEECCCCCB
T ss_pred             EEEEecCCcc
Confidence            9999998774

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=95.27  E-value=0.0096  Score=50.25  Aligned_cols=37  Identities=27%  Similarity=0.351  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.|+|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~   62 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARD   62 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            5789999999999889999999999999999988664

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.27  E-value=0.013  Score=49.30  Aligned_cols=36  Identities=31%  Similarity=0.408  Sum_probs=33.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   37 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG   37 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence            679999999999999999999999999999988664

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=95.27  E-value=0.011  Score=49.71  Aligned_cols=49  Identities=18%  Similarity=0.224  Sum_probs=39.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC---------------CHHhhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT---------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~---------------~l~~~~~~aDivisA~g  219 (229)
                      +|.|||.|.+ |..++..|.+.| ..|+++++...               +..+.+ .+|+||.++.
T Consensus         2 ~i~iiG~G~m-G~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~   66 (263)
T 1yqg_A            2 NVYFLGGGNM-AAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK   66 (263)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC
T ss_pred             EEEEECchHH-HHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC
Confidence            6899999995 999999999999 89999977421               222445 7899999987

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.27  E-value=0.041  Score=46.94  Aligned_cols=58  Identities=17%  Similarity=0.259  Sum_probs=43.8

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------C------HHhhhcc--CcEEEEecCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------D------PESIVRE--ADIVIAAAGQAM  222 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------~------l~~~~~~--aDivisA~g~p~  222 (229)
                      ..-++|+|.|+++.+|+.++..|+++|++|+.+.+...           |      +.+.++.  .|+||.+.|...
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   86 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSS   86 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccc
Confidence            35689999999999999999999999999998866421           2      2234444  799999988643

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=95.27  E-value=0.0091  Score=50.67  Aligned_cols=37  Identities=22%  Similarity=0.405  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.|+|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   53 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRD   53 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999989999999999999999988663

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.25  E-value=0.013  Score=49.64  Aligned_cols=37  Identities=14%  Similarity=0.197  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   44 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAART   44 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            4789999999999999999999999999999988664

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=95.25  E-value=0.02  Score=48.70  Aligned_cols=37  Identities=24%  Similarity=0.390  Sum_probs=34.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~   43 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRC   43 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            5789999999999999999999999999999998763

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=95.24  E-value=0.021  Score=47.76  Aligned_cols=37  Identities=27%  Similarity=0.386  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~   40 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARR   40 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4689999999999999999999999999999988664

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=95.24  E-value=0.012  Score=50.14  Aligned_cols=37  Identities=14%  Similarity=0.353  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~   60 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS   60 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999989999999999999999988664

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.24  E-value=0.027  Score=47.93  Aligned_cols=53  Identities=23%  Similarity=0.209  Sum_probs=42.4

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCCC-----------------------HHhhhccCcEEEEecC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTTD-----------------------PESIVREADIVIAAAG  219 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~~-----------------------l~~~~~~aDivisA~g  219 (229)
                      .|+|+|.|+++.+|+.++..|+++| ++|+.+.+....                       +.+.++.+|+||..+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   81 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN   81 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence            5899999998889999999999988 899887664221                       2245677899998876

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=95.24  E-value=0.035  Score=47.43  Aligned_cols=56  Identities=21%  Similarity=0.217  Sum_probs=42.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------------CHHhhhccCcEEEEecCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------------DPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------------~l~~~~~~aDivisA~g~p~~  223 (229)
                      |+|+|.|+++.+|+.++..|+++|..|.+..+...                   ++.+.+...|+||...|.+..
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~~~   76 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEAARLVKADLAADDIKDYLKGAEEVWHIAANPDV   76 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGSCTTEEEECCCTTTSCCHHHHTTCSEEEECCCCCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhcCCCcEEEECcCChHHHHHHhcCCCEEEECCCCCCh
Confidence            58999999999999999999999966665543221                   234567789999999887654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=95.23  E-value=0.058  Score=47.72  Aligned_cols=77  Identities=19%  Similarity=0.254  Sum_probs=53.7

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH--------------------
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE--------------------  205 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~--------------------  205 (229)
                      .+||....++..|++.++ -.|.+|+|+|.|. ||..+++++...|++|+.+.+....++                    
T Consensus       160 ~l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~  237 (360)
T 1piw_A          160 PLLCGGLTVYSPLVRNGC-GPGKKVGIVGLGG-IGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWG  237 (360)
T ss_dssp             GGGTHHHHHHHHHHHTTC-STTCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHH
T ss_pred             hhhhhHHHHHHHHHHcCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHH
Confidence            356666666677766443 3699999999965 699999999999999887764332211                    


Q ss_pred             hhh-ccCcEEEEecCC--CCCC
Q 027064          206 SIV-READIVIAAAGQ--AMMV  224 (229)
Q Consensus       206 ~~~-~~aDivisA~g~--p~~i  224 (229)
                      +.+ ...|+||.++|.  +..+
T Consensus       238 ~~~~~~~D~vid~~g~~~~~~~  259 (360)
T 1piw_A          238 EKYFDTFDLIVVCASSLTDIDF  259 (360)
T ss_dssp             HHSCSCEEEEEECCSCSTTCCT
T ss_pred             HHhhcCCCEEEECCCCCcHHHH
Confidence            111 247999999987  5543

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.23  E-value=0.021  Score=48.35  Aligned_cols=38  Identities=21%  Similarity=0.218  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   46 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLC   46 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence            46899999999999999999999999999999988653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.23  E-value=0.017  Score=48.87  Aligned_cols=38  Identities=34%  Similarity=0.380  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+..
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~   68 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSH   68 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            57899999999999999999999999999999886643

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=95.23  E-value=0.021  Score=48.41  Aligned_cols=38  Identities=11%  Similarity=0.232  Sum_probs=34.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++.||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~   64 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN   64 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence            35789999999999999999999999999999988653

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=95.23  E-value=0.018  Score=50.24  Aligned_cols=53  Identities=23%  Similarity=0.395  Sum_probs=41.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCC-------------------------CCHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHT-------------------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t-------------------------~~l~~~~~~aDivisA~g~  220 (229)
                      ++|+|||.|. +|.+++..|...|  ..|+++++..                         .+. +.++.||+||.+++.
T Consensus         2 ~kI~VIGaG~-~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~   79 (309)
T 1hyh_A            2 RKIGIIGLGN-VGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGN   79 (309)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCC
Confidence            4799999888 4999999999888  6898886632                         122 346689999999997


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      |.
T Consensus        80 ~~   81 (309)
T 1hyh_A           80 IK   81 (309)
T ss_dssp             GG
T ss_pred             cc
Confidence            54

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=95.22  E-value=0.022  Score=47.66  Aligned_cols=38  Identities=24%  Similarity=0.305  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+..
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   41 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP   41 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence            47899999999999999999999999999999886654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.21  E-value=0.034  Score=47.86  Aligned_cols=55  Identities=22%  Similarity=0.316  Sum_probs=40.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------C------HHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------D------PESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~------l~~~~~~aDivisA~g~p~  222 (229)
                      .+|+|.|+++.+|+.++..|+++|++|+++.+...               |      +.+.++..|+||.++|..+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   89 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYP   89 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-----
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCc
Confidence            48999999999999999999999999998866421               1      2245677899999888543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=95.20  E-value=0.022  Score=47.89  Aligned_cols=37  Identities=30%  Similarity=0.389  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRN   40 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988653

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=95.20  E-value=0.017  Score=47.77  Aligned_cols=37  Identities=27%  Similarity=0.476  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~   39 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH   39 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988653

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=95.20  E-value=0.022  Score=48.03  Aligned_cols=37  Identities=22%  Similarity=0.452  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN   40 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988653

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.19  E-value=0.022  Score=48.22  Aligned_cols=37  Identities=16%  Similarity=0.225  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.|+|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~   43 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC   43 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence            5789999999999999999999999999999988653

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.19  E-value=0.016  Score=54.36  Aligned_cols=33  Identities=12%  Similarity=0.203  Sum_probs=29.6

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -++|.|||.|.+ |.++|..|++.|..|+++++.
T Consensus         5 ~~kVgVIGaG~M-G~~IA~~la~aG~~V~l~D~~   37 (483)
T 3mog_A            5 VQTVAVIGSGTM-GAGIAEVAASHGHQVLLYDIS   37 (483)
T ss_dssp             CCCEEEECCSHH-HHHHHHHHHHTTCCEEEECSC
T ss_pred             CCEEEEECcCHH-HHHHHHHHHHCCCeEEEEECC
Confidence            368999999996 999999999999999999764

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=95.19  E-value=0.045  Score=48.16  Aligned_cols=54  Identities=22%  Similarity=0.236  Sum_probs=38.7

Q ss_pred             ccCCHHHHHHHHHHh-CCCC-----CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          147 LPCTPKGCLELLKRS-GVTI-----KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       147 ~PcTa~av~~lL~~~-~~~l-----~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +||....++..|.+. ++..     .|++|+|+|.++.||..+++++...||+|+.+.+.
T Consensus       125 ~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~  184 (346)
T 3fbg_A          125 LPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASR  184 (346)
T ss_dssp             SHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             cchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            355544555555433 3321     69999999766667999999999999999988663

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=95.17  E-value=0.02  Score=51.60  Aligned_cols=38  Identities=8%  Similarity=0.005  Sum_probs=33.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ...+++|+|.|+++.+|+.++..|+++|++|+++.+..
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~  103 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRAD  103 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECS
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCC
Confidence            35678999999999999999999999999998886543

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=95.16  E-value=0.031  Score=48.30  Aligned_cols=55  Identities=22%  Similarity=0.372  Sum_probs=43.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhC--CCEEEEEcCCCC--------------------C------HHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSHTT--------------------D------PESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~--~atVtv~~~~t~--------------------~------l~~~~~~aDivisA~g  219 (229)
                      ++|+|.|+++.+|+.++..|+++  |++|+++.+...                    |      +.+.++.+|+||.+.|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   84 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   84 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence            78999999999999999999998  889998865320                    1      2245677899999988


Q ss_pred             CCC
Q 027064          220 QAM  222 (229)
Q Consensus       220 ~p~  222 (229)
                      ...
T Consensus        85 ~~~   87 (348)
T 1oc2_A           85 ESH   87 (348)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            653

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=95.16  E-value=0.0085  Score=51.50  Aligned_cols=38  Identities=24%  Similarity=0.232  Sum_probs=30.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   66 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR   66 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            46789999999999889999999999999999998664

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=95.16  E-value=0.019  Score=47.89  Aligned_cols=37  Identities=16%  Similarity=0.294  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN   39 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            4689999999999999999999999999999988664

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=95.15  E-value=0.053  Score=42.26  Aligned_cols=53  Identities=15%  Similarity=0.214  Sum_probs=43.5

Q ss_pred             CCCeEEEEcc----chhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecC
Q 027064          166 KGKRAVVVGR----SNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       166 ~gk~v~ViG~----s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g  219 (229)
                      +-++|.|||.    |. +|.+++..|++.|++|+..|.+.         .++.+.....|++|.+++
T Consensus        13 ~p~~IavIGaS~~~g~-~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp   78 (138)
T 1y81_A           13 EFRKIALVGASKNPAK-YGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP   78 (138)
T ss_dssp             -CCEEEEETCCSCTTS-HHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC
T ss_pred             CCCeEEEEeecCCCCC-HHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC
Confidence            5689999999    55 59999999999999999888753         256676778999999887

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.15  E-value=0.0096  Score=50.90  Aligned_cols=38  Identities=26%  Similarity=0.307  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~   59 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTD   59 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999999999999999988653

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=95.15  E-value=0.036  Score=49.12  Aligned_cols=56  Identities=14%  Similarity=0.313  Sum_probs=44.0

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC-------EEEEEcCC----C------------------------CCHHhhhccC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA-------TVTIVHSH----T------------------------TDPESIVREA  211 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a-------tVtv~~~~----t------------------------~~l~~~~~~a  211 (229)
                      ..+|+|+|+++.||.+++..|+.+|.       .|.+++..    .                        .++.+.++.|
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA   84 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence            46899999955679999999988875       67777554    0                        2455678999


Q ss_pred             cEEEEecCCCC
Q 027064          212 DIVIAAAGQAM  222 (229)
Q Consensus       212 DivisA~g~p~  222 (229)
                      |+||.+.|.|.
T Consensus        85 D~Vi~~ag~~~   95 (329)
T 1b8p_A           85 DVALLVGARPR   95 (329)
T ss_dssp             SEEEECCCCCC
T ss_pred             CEEEEeCCCCC
Confidence            99999999775

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=95.15  E-value=0.021  Score=48.54  Aligned_cols=55  Identities=15%  Similarity=0.195  Sum_probs=43.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhC--CCEEEEEcCCCC-------------C------HHhhhc--cCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSHTT-------------D------PESIVR--EADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~--~atVtv~~~~t~-------------~------l~~~~~--~aDivisA~g~p  221 (229)
                      +++|+|.|+++.+|+.++..|+++  |++|+++.+...             |      +.+.++  ..|+||.+.|..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   79 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL   79 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence            588999999999999999999998  899998866421             1      224455  789999988753

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=95.12  E-value=0.039  Score=48.63  Aligned_cols=74  Identities=20%  Similarity=0.163  Sum_probs=50.3

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-------------------CHHh
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-------------------DPES  206 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-------------------~l~~  206 (229)
                      +||....++..++..++ -.|.+|+|+|.|. ||..+++++...|+ +|+.+.+...                   +..+
T Consensus       148 ~~~~~~ta~~al~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~  225 (352)
T 3fpc_A          148 IPDMMTTGFHGAELANI-KLGDTVCVIGIGP-VGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVE  225 (352)
T ss_dssp             TTTHHHHHHHHHHHTTC-CTTCCEEEECCSH-HHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHH
T ss_pred             ccchhHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHH
Confidence            34433444455555544 3699999999876 69999999999999 7888765321                   1111


Q ss_pred             h----hc--cCcEEEEecCCCC
Q 027064          207 I----VR--EADIVIAAAGQAM  222 (229)
Q Consensus       207 ~----~~--~aDivisA~g~p~  222 (229)
                      .    +.  ..|+||.++|.|.
T Consensus       226 ~v~~~t~g~g~D~v~d~~g~~~  247 (352)
T 3fpc_A          226 QILKATDGKGVDKVVIAGGDVH  247 (352)
T ss_dssp             HHHHHTTTCCEEEEEECSSCTT
T ss_pred             HHHHHcCCCCCCEEEECCCChH
Confidence            1    11  4799999999875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=95.12  E-value=0.024  Score=47.84  Aligned_cols=37  Identities=14%  Similarity=0.272  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   46 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS   46 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988653

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=95.11  E-value=0.021  Score=48.46  Aligned_cols=37  Identities=22%  Similarity=0.241  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~   65 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART   65 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence            3689999999999999999999999999999988653

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.11  E-value=0.022  Score=49.90  Aligned_cols=54  Identities=24%  Similarity=0.337  Sum_probs=39.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-----------------------CHHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-----------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-----------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      .+|+|||+|. +|.+++..|+..|.  .|++++....                       +..+.++.||+||.++|.|.
T Consensus         1 mkI~VIGaG~-vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~~   79 (304)
T 2v6b_A            1 MKVGVVGTGF-VGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGANQ   79 (304)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC----
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence            3799999977 59999999999988  8988855211                       11245789999999998775

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=95.11  E-value=0.02  Score=48.07  Aligned_cols=37  Identities=38%  Similarity=0.485  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   39 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN   39 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988664

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=95.11  E-value=0.029  Score=47.74  Aligned_cols=35  Identities=29%  Similarity=0.273  Sum_probs=30.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++||.++|.|++.-+|+.++..|+++|++|.++.+
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~   59 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYA   59 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEES
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence            57999999999998999999999999999988733

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=95.10  E-value=0.023  Score=49.88  Aligned_cols=56  Identities=23%  Similarity=0.439  Sum_probs=41.0

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------------CHHhhhccCcEEE
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------------DPESIVREADIVI  215 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------------~l~~~~~~aDivi  215 (229)
                      +...-++|+|||.|.+ |..++..|.+.|..|+++ ++..                           +. +.+..+|+||
T Consensus        15 ~~~~~~kI~IiGaGa~-G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vi   91 (318)
T 3hwr_A           15 LYFQGMKVAIMGAGAV-GCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLVL   91 (318)
T ss_dssp             -----CEEEEESCSHH-HHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEEE
T ss_pred             hhccCCcEEEECcCHH-HHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEEE
Confidence            4456789999999995 999999999999999998 4321                           22 2356799999


Q ss_pred             EecCCC
Q 027064          216 AAAGQA  221 (229)
Q Consensus       216 sA~g~p  221 (229)
                      .|+...
T Consensus        92 lavk~~   97 (318)
T 3hwr_A           92 FCVKST   97 (318)
T ss_dssp             ECCCGG
T ss_pred             EEcccc
Confidence            998754

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=95.10  E-value=0.052  Score=46.73  Aligned_cols=32  Identities=31%  Similarity=0.321  Sum_probs=29.4

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      +|+|+|.|+++.+|+.++..|+++|++|+.+.
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~   40 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTV   40 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEE
Confidence            79999999999999999999999999998653

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.10  E-value=0.024  Score=49.84  Aligned_cols=52  Identities=23%  Similarity=0.351  Sum_probs=41.4

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC--------------------------CCHHhhhccCcEEEEecCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT--------------------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t--------------------------~~l~~~~~~aDivisA~g~  220 (229)
                      +|+|||+|. +|.+++..|...|.  .|.+++...                          .+ .+.++.||+||.++|.
T Consensus         2 kI~ViGaG~-vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~   79 (294)
T 1oju_A            2 KLGFVGAGR-VGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL   79 (294)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred             EEEEECCCH-HHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence            789999977 59999999988876  788875421                          13 4678899999999998


Q ss_pred             CC
Q 027064          221 AM  222 (229)
Q Consensus       221 p~  222 (229)
                      |.
T Consensus        80 ~~   81 (294)
T 1oju_A           80 AR   81 (294)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.10  E-value=0.029  Score=49.82  Aligned_cols=53  Identities=25%  Similarity=0.392  Sum_probs=40.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-------------------------CHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      +|+|||+|. ||.+++..|+..+.  .|.+++....                         +..+.++.||+||.++|.|
T Consensus         2 kv~ViGaG~-vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~   80 (314)
T 3nep_X            2 KVTVIGAGN-VGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP   80 (314)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred             EEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence            789999977 59999999988776  7888765321                         2235688999999999977


Q ss_pred             C
Q 027064          222 M  222 (229)
Q Consensus       222 ~  222 (229)
                      .
T Consensus        81 ~   81 (314)
T 3nep_X           81 R   81 (314)
T ss_dssp             -
T ss_pred             C
Confidence            4

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=95.09  E-value=0.014  Score=51.15  Aligned_cols=37  Identities=30%  Similarity=0.419  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++.||.|+|.|+|.-+|+.++..|+++|++|.++.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~   41 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIR   41 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECC
Confidence            4789999999999999999999999999999988664

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=95.09  E-value=0.035  Score=51.77  Aligned_cols=53  Identities=19%  Similarity=0.181  Sum_probs=43.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC----------------------------------CCCHHhhhccCcE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH----------------------------------TTDPESIVREADI  213 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~----------------------------------t~~l~~~~~~aDi  213 (229)
                      ++++|||-|- ||.|+|..|+++|.+|+.++..                                  |.+..+.++.||+
T Consensus        22 ~~IaViGlGY-VGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~  100 (444)
T 3vtf_A           22 ASLSVLGLGY-VGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDA  100 (444)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSE
T ss_pred             CEEEEEccCH-HHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCc
Confidence            6899999999 5999999999999999988542                                  1134456888999


Q ss_pred             EEEecCCC
Q 027064          214 VIAAAGQA  221 (229)
Q Consensus       214 visA~g~p  221 (229)
                      +|.++|-|
T Consensus       101 ~~I~VpTP  108 (444)
T 3vtf_A          101 TFIAVGTP  108 (444)
T ss_dssp             EEECCCCC
T ss_pred             eEEEecCC
Confidence            99999877

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=95.09  E-value=0.02  Score=50.33  Aligned_cols=53  Identities=23%  Similarity=0.294  Sum_probs=41.9

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCC-------CEEEEEcCCCC---------------------------------CHHh
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKAD-------ATVTIVHSHTT---------------------------------DPES  206 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~-------atVtv~~~~t~---------------------------------~l~~  206 (229)
                      .++|.|||.|.+ |.+++..|.+.|       .+|+++++...                                 ++.+
T Consensus         8 ~mkI~iIG~G~m-G~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (354)
T 1x0v_A            8 SKKVCIVGSGNW-GSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ   86 (354)
T ss_dssp             CEEEEEECCSHH-HHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred             CCeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence            368999999995 999999999988       88998866422                                 2334


Q ss_pred             hhccCcEEEEecCC
Q 027064          207 IVREADIVIAAAGQ  220 (229)
Q Consensus       207 ~~~~aDivisA~g~  220 (229)
                      .++.||+||.|+..
T Consensus        87 ~~~~aD~Vilav~~  100 (354)
T 1x0v_A           87 AAEDADILIFVVPH  100 (354)
T ss_dssp             HHTTCSEEEECCCG
T ss_pred             HHcCCCEEEEeCCH
Confidence            56789999999864

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.09  E-value=0.024  Score=48.37  Aligned_cols=37  Identities=24%  Similarity=0.339  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~   59 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK   59 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999988664

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.09  E-value=0.02  Score=48.02  Aligned_cols=37  Identities=22%  Similarity=0.348  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   47 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK   47 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999988664

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=95.09  E-value=0.02  Score=48.30  Aligned_cols=34  Identities=18%  Similarity=0.333  Sum_probs=32.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~   38 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLT   38 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            5789999999999999999999999999999987

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=95.08  E-value=0.038  Score=48.20  Aligned_cols=34  Identities=21%  Similarity=0.231  Sum_probs=30.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+|+|.|+++.+|+.++..|+++|++|+++.+.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRR   34 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            5899999999999999999999999999988653

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=95.08  E-value=0.02  Score=49.32  Aligned_cols=39  Identities=23%  Similarity=0.400  Sum_probs=35.9

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      .+|+||.++|-|.|.=+|+.+|..|.++||+|.++.+..
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~   43 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRA   43 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCc
Confidence            479999999999999999999999999999999997754

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=95.08  E-value=0.043  Score=45.89  Aligned_cols=50  Identities=20%  Similarity=0.302  Sum_probs=41.4

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEE-EEEcCCC------CCHHhhh-ccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATV-TIVHSHT------TDPESIV-READIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atV-tv~~~~t------~~l~~~~-~~aDivisA~g  219 (229)
                      +|.|||.|.+ |++++..|.+.|..+ .++++..      .++.+.+ .++|+||.+++
T Consensus         2 ~vgiIG~G~m-G~~~~~~l~~~g~~lv~v~d~~~~~~~~~~~~~~l~~~~~DvVv~~~~   59 (236)
T 2dc1_A            2 LVGLIGYGAI-GKFLAEWLERNGFEIAAILDVRGEHEKMVRGIDEFLQREMDVAVEAAS   59 (236)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEEECSSCCCTTEESSHHHHTTSCCSEEEECSC
T ss_pred             EEEEECCCHH-HHHHHHHHhcCCCEEEEEEecCcchhhhcCCHHHHhcCCCCEEEECCC
Confidence            6899999885 999999999889986 6887652      2577777 68999999986

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.07  E-value=0.024  Score=48.00  Aligned_cols=37  Identities=14%  Similarity=0.144  Sum_probs=33.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r   43 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYH   43 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEES
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec
Confidence            3678999999999998999999999999999998743

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=95.07  E-value=0.025  Score=48.11  Aligned_cols=38  Identities=24%  Similarity=0.327  Sum_probs=34.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   42 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD   42 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999999999999999999988664

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.05  E-value=0.024  Score=48.18  Aligned_cols=37  Identities=16%  Similarity=0.232  Sum_probs=34.0

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r   47 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDI   47 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence            3689999999999999999999999999999999865

>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*

Probab=95.05  E-value=0.74  Score=41.57  Aligned_cols=156  Identities=16%  Similarity=0.107  Sum_probs=97.1

Q ss_pred             eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC--CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHh
Q 027064           41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV--SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLG  118 (229)
Q Consensus        41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~--~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~  118 (229)
                      .++.+...   .|..---+=..++.++|.++..+.-..+.  .-|-+.+.++-|+.-  +|+|.+--|  .+-..+++.+
T Consensus        72 ~la~lF~e---pSTRTR~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~--~D~IviR~~--~~~~~~~la~  144 (358)
T 4h31_A           72 NIALIFEK---ASTRTRCAFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRM--YDGIQYRGF--GQAIVEELGA  144 (358)
T ss_dssp             EEEEEESS---CCSHHHHHHHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHHHH--CSEEEEECS--CHHHHHHHHH
T ss_pred             EEEEEeCC---CChhhHHHHHHHHHHcCCeEEECCcccccccCccchhHHHHHhhcc--CceeEeccc--chhHHHHhhh
Confidence            45565533   35555556677899999998766532211  113444444444443  679988755  3222222222


Q ss_pred             cCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHH-HHhC-CCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEE
Q 027064          119 EISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELL-KRSG-VTIKGKRAVVVGRS-NIVGLPVSLLLLKADATVT  195 (229)
Q Consensus       119 ~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL-~~~~-~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVt  195 (229)
                      ..    +|   --.| |     + ....-||=+.+=+--+ |+.+ ..++|++|++||-. .-|.+.++.+|...|++|+
T Consensus       145 ~s----~v---PVIN-G-----~-g~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~  210 (358)
T 4h31_A          145 FA----GV---PVWN-G-----L-TDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIR  210 (358)
T ss_dssp             HS----SS---CEEE-S-----C-CSSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEE
T ss_pred             hc----cC---ceEC-C-----C-CcCCCchHHHHHHHHHHHHhcCCCcCceEEEecCCCCcccchHHHHHHHhcCceEE
Confidence            21    22   1222 2     2 2456799777765544 4444 37899999999965 4579999999999999999


Q ss_pred             EEcCC-------------------------CCCHHhhhccCcEEEEe
Q 027064          196 IVHSH-------------------------TTDPESIVREADIVIAA  217 (229)
Q Consensus       196 v~~~~-------------------------t~~l~~~~~~aDivisA  217 (229)
                      +|.-.                         |.|+.+.++.||+|.+-
T Consensus       211 ~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~  257 (358)
T 4h31_A          211 LVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTD  257 (358)
T ss_dssp             EESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred             EeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEE
Confidence            98542                         23667889999999854

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=95.05  E-value=0.043  Score=48.92  Aligned_cols=53  Identities=21%  Similarity=0.224  Sum_probs=37.7

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .+||.....+..+.+..---.|.+|+|+|+|. ||..+++++...|+ +|+.+.+
T Consensus       173 ~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~a~q~a~~~Ga~~Vi~~~~  226 (378)
T 3uko_A          173 LLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGT-VGLAVAEGAKTAGASRIIGIDI  226 (378)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCCEEEECCSH-HHHHHHHHHHHHTCSCEEEECS
T ss_pred             hhhhhHHHHHHHHHhhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcC
Confidence            34565554555443332223699999999976 69999999999999 7887754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.05  E-value=0.018  Score=48.42  Aligned_cols=53  Identities=15%  Similarity=0.164  Sum_probs=42.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhC--CCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSHTT---------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~--~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~  220 (229)
                      |+|+|.|+++.+|+.++..|+++  |++|+.+.+...                     ++.+.++.+|+||..+|.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   76 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP   76 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence            57999999999999999999998  999988866421                     123456778999988774

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=95.04  E-value=0.011  Score=50.76  Aligned_cols=37  Identities=30%  Similarity=0.492  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.|+|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~   41 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN   41 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            4789999999999989999999999999999988653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.03  E-value=0.017  Score=48.19  Aligned_cols=31  Identities=19%  Similarity=0.050  Sum_probs=28.8

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      ||+++|.|++.-+|+.++..|+++|++|+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~   31 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCH   31 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEe
Confidence            6899999999999999999999999999988

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=95.03  E-value=0.023  Score=47.46  Aligned_cols=37  Identities=22%  Similarity=0.281  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~  200 (229)
                      +++||+++|.|++.-+|+.++..|+++|++ |.++.+.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~   39 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRV   39 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecC
Confidence            468999999999999999999999999996 8887654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=95.03  E-value=0.026  Score=47.92  Aligned_cols=38  Identities=26%  Similarity=0.301  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   54 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN   54 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999999999999999999988664

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.02  E-value=0.026  Score=48.30  Aligned_cols=37  Identities=24%  Similarity=0.390  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++||+|+|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~   51 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK   51 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999988653

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=95.02  E-value=0.022  Score=50.80  Aligned_cols=56  Identities=18%  Similarity=0.319  Sum_probs=43.2

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEecC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~g  219 (229)
                      ..++|+|||+|. ||.+++..|+..|.  .|++++....                        +..+.++.||+||.++|
T Consensus         4 ~~~kI~ViGaG~-vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag   82 (326)
T 3pqe_A            4 HVNKVALIGAGF-VGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAG   82 (326)
T ss_dssp             SCCEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCS
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecc
Confidence            357999999977 59999999998876  7888765210                        11356889999999999


Q ss_pred             CCC
Q 027064          220 QAM  222 (229)
Q Consensus       220 ~p~  222 (229)
                      .|.
T Consensus        83 ~p~   85 (326)
T 3pqe_A           83 ANQ   85 (326)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            774

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=95.02  E-value=0.042  Score=48.27  Aligned_cols=56  Identities=14%  Similarity=0.311  Sum_probs=44.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC-------EEEEEcCCC--------------------------CCHHhhhccCcE
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA-------TVTIVHSHT--------------------------TDPESIVREADI  213 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a-------tVtv~~~~t--------------------------~~l~~~~~~aDi  213 (229)
                      ..+|+|+|+++.||.+++..|+.+|.       .|.+++...                          .++.+.++.+|+
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D~   83 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADY   83 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCCE
Confidence            35899999977789999999998885       788876531                          134556788999


Q ss_pred             EEEecCCCC
Q 027064          214 VIAAAGQAM  222 (229)
Q Consensus       214 visA~g~p~  222 (229)
                      ||...|.|.
T Consensus        84 Vih~Ag~~~   92 (327)
T 1y7t_A           84 ALLVGAAPR   92 (327)
T ss_dssp             EEECCCCCC
T ss_pred             EEECCCcCC
Confidence            999999875

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.01  E-value=0.024  Score=50.02  Aligned_cols=53  Identities=21%  Similarity=0.305  Sum_probs=40.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC---C----------------------CHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT---T----------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t---~----------------------~l~~~~~~aDivisA~g~p  221 (229)
                      ||.|||+|. ||.++|.+|..++.  .+.+++...   +                      +..+.++.|||||.+.|.|
T Consensus         2 KV~IiGaG~-VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p   80 (294)
T 2x0j_A            2 KLGFVGAGR-VGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA   80 (294)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred             EEEEECcCH-HHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence            799999988 69999999877654  466665421   0                      1235699999999999977


Q ss_pred             C
Q 027064          222 M  222 (229)
Q Consensus       222 ~  222 (229)
                      .
T Consensus        81 r   81 (294)
T 2x0j_A           81 R   81 (294)
T ss_dssp             C
T ss_pred             C
Confidence            5

>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A

Probab=95.01  E-value=0.039  Score=51.60  Aligned_cols=56  Identities=13%  Similarity=0.181  Sum_probs=44.1

Q ss_pred             CCCeEEEEccchhhhHH-HHHHHhhCCCEEEEEcCCCCC----HH------------hhhccCcEEEEecCCCC
Q 027064          166 KGKRAVVVGRSNIVGLP-VSLLLLKADATVTIVHSHTTD----PE------------SIVREADIVIAAAGQAM  222 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~p-la~~L~~~~atVtv~~~~t~~----l~------------~~~~~aDivisA~g~p~  222 (229)
                      ..|++.|||-|+. |.. +|.+|.++|+.|++++.+...    |.            +.+..+|.||...|.|.
T Consensus        21 ~~~~v~viGiG~s-G~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~   93 (494)
T 4hv4_A           21 RVRHIHFVGIGGA-GMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISA   93 (494)
T ss_dssp             -CCEEEEETTTST-THHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCT
T ss_pred             cCCEEEEEEEcHh-hHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCC
Confidence            4699999999997 996 899999999999999875321    11            33567899998888764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=95.01  E-value=0.035  Score=51.20  Aligned_cols=37  Identities=16%  Similarity=0.271  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhC---CCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKA---DATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~---~atVtv~~~~  200 (229)
                      ..++|+|+|.|+++.+|+.++..|+++   |++|+.+.+.
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~  109 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRA  109 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECC
Confidence            467999999999999999999999998   8999988753

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=95.00  E-value=0.062  Score=47.66  Aligned_cols=53  Identities=28%  Similarity=0.292  Sum_probs=39.9

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+||....++..|.+...--.|.+|+|+|.|. ||..+++++...||+|+.+.+
T Consensus       169 ~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~a~qla~~~Ga~Vi~~~~  221 (363)
T 3uog_A          169 TLPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAKATGAEVIVTSS  221 (363)
T ss_dssp             TTTTHHHHHHHHHTTTTCCCTTCEEEEESSBH-HHHHHHHHHHHTTCEEEEEES
T ss_pred             hcccHHHHHHHHHHHhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEec
Confidence            35676666667664433334799999999665 799999999999999887754

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=95.00  E-value=0.023  Score=47.16  Aligned_cols=37  Identities=30%  Similarity=0.331  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~   38 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATS   38 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999999999999999999999888653

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=95.00  E-value=0.044  Score=47.29  Aligned_cols=34  Identities=24%  Similarity=0.288  Sum_probs=29.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .||+|+|.|+++.+|+.++..|+++|++|+.+.+
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r   37 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVR   37 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence            6899999999999999999999999999986543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=94.99  E-value=0.012  Score=49.50  Aligned_cols=37  Identities=16%  Similarity=0.196  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~   40 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARS   40 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            5789999999999989999999999999999988653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=94.99  E-value=0.015  Score=48.55  Aligned_cols=35  Identities=14%  Similarity=0.246  Sum_probs=31.7

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +||+++|.|+|.-+|+.++..|+++|++|.++.+.
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~   36 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR   36 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            58999999999999999999999999999988764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=94.99  E-value=0.021  Score=47.81  Aligned_cols=38  Identities=16%  Similarity=0.212  Sum_probs=34.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~   47 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN   47 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999999999999999999988663

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=94.98  E-value=0.025  Score=49.04  Aligned_cols=74  Identities=16%  Similarity=0.232  Sum_probs=47.4

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhh---------------hccC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESI---------------VREA  211 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~---------------~~~a  211 (229)
                      +||....++..|+..++ -.|.+|+|+|+|. ||..+++++...||+|+.+.+ ...+...               -...
T Consensus       124 l~~~~~ta~~al~~~~~-~~g~~VlV~GaG~-vG~~a~qlak~~Ga~Vi~~~~-~~~~~~~~~lGa~~v~~d~~~v~~g~  200 (315)
T 3goh_A          124 LPCPLLTAWQAFEKIPL-TKQREVLIVGFGA-VNNLLTQMLNNAGYVVDLVSA-SLSQALAAKRGVRHLYREPSQVTQKY  200 (315)
T ss_dssp             SHHHHHHHHHHHTTSCC-CSCCEEEEECCSH-HHHHHHHHHHHHTCEEEEECS-SCCHHHHHHHTEEEEESSGGGCCSCE
T ss_pred             CccHHHHHHHHHhhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEEC-hhhHHHHHHcCCCEEEcCHHHhCCCc
Confidence            45555566666643333 4799999999955 799999999999999888763 3322210               1347


Q ss_pred             cEEEEecCCCCC
Q 027064          212 DIVIAAAGQAMM  223 (229)
Q Consensus       212 DivisA~g~p~~  223 (229)
                      |++|.++|.+.+
T Consensus       201 Dvv~d~~g~~~~  212 (315)
T 3goh_A          201 FAIFDAVNSQNA  212 (315)
T ss_dssp             EEEECC------
T ss_pred             cEEEECCCchhH
Confidence            899999987754

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=94.98  E-value=0.041  Score=48.62  Aligned_cols=55  Identities=15%  Similarity=0.340  Sum_probs=41.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-----------------------CHHhhhccCcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-----------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-----------------------~l~~~~~~aDivisA~g~p  221 (229)
                      ..+|+|||+|. ||.|++..|+..+.  .|.+++....                       +..+.++.||+||.++|.|
T Consensus         7 ~~KI~IiGaG~-vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p   85 (318)
T 1y6j_A            7 RSKVAIIGAGF-VGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN   85 (318)
T ss_dssp             CCCEEEECCSH-HHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred             CCEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence            46899999977 69999999999886  7888865321                       1134588999999999987


Q ss_pred             C
Q 027064          222 M  222 (229)
Q Consensus       222 ~  222 (229)
                      .
T Consensus        86 ~   86 (318)
T 1y6j_A           86 R   86 (318)
T ss_dssp             -
T ss_pred             C
Confidence            5

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=94.97  E-value=0.056  Score=46.44  Aligned_cols=55  Identities=15%  Similarity=0.312  Sum_probs=42.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------C------HHhhhcc--CcEEEEec
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------D------PESIVRE--ADIVIAAA  218 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~------l~~~~~~--aDivisA~  218 (229)
                      ++|+|.|+++.+|+.++..|+++|++|+++.+..+                     |      +.+.++.  .|+||..+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence            58999999999999999999999999998854210                     1      2244555  89999988


Q ss_pred             CCCC
Q 027064          219 GQAM  222 (229)
Q Consensus       219 g~p~  222 (229)
                      |...
T Consensus        82 ~~~~   85 (347)
T 1orr_A           82 GQVA   85 (347)
T ss_dssp             CCCC
T ss_pred             cccC
Confidence            8643

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=94.95  E-value=0.039  Score=51.92  Aligned_cols=54  Identities=15%  Similarity=0.122  Sum_probs=44.0

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------CCHHhhhcc---CcEEEEecCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------TDPESIVRE---ADIVIAAAGQA  221 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------~~l~~~~~~---aDivisA~g~p  221 (229)
                      .++|.|||.|.+ |.+++..|.++|.+|+++++..                   .++.+.+..   +|+||.++..+
T Consensus        10 ~~~IgvIGlG~M-G~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~   85 (497)
T 2p4q_A           10 SADFGLIGLAVM-GQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAG   85 (497)
T ss_dssp             CCSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSS
T ss_pred             CCCEEEEeeHHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCCh
Confidence            468999999996 9999999999999999997742                   234455555   99999998765

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=94.95  E-value=0.028  Score=47.85  Aligned_cols=38  Identities=24%  Similarity=0.253  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~   44 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDIC   44 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence            35789999999999989999999999999999988553

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=94.95  E-value=0.018  Score=51.70  Aligned_cols=74  Identities=16%  Similarity=0.204  Sum_probs=49.1

Q ss_pred             cCCHHHHHHHHHHhCCCCCCCeEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCC-------------------CCHHhh
Q 027064          148 PCTPKGCLELLKRSGVTIKGKRAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHT-------------------TDPESI  207 (229)
Q Consensus       148 PcTa~av~~lL~~~~~~l~gk~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t-------------------~~l~~~  207 (229)
                      ||.+..++.+++...  ..|.+|+|+| .++.||..+++++...||+|+.+.+..                   .+..+.
T Consensus       154 ~~~~~ta~~~~~~~~--~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~  231 (379)
T 3iup_A          154 FVNPLTALGMVETMR--LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQD  231 (379)
T ss_dssp             SHHHHHHHHHHHHHH--HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHH
T ss_pred             hhhHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHH
Confidence            444444455555544  4799999994 444479999999999999888764321                   122222


Q ss_pred             h------ccCcEEEEecCCCCC
Q 027064          208 V------READIVIAAAGQAMM  223 (229)
Q Consensus       208 ~------~~aDivisA~g~p~~  223 (229)
                      +      +..|+||.++|.+..
T Consensus       232 v~~~t~~~g~d~v~d~~g~~~~  253 (379)
T 3iup_A          232 LTEALVSTGATIAFDATGGGKL  253 (379)
T ss_dssp             HHHHHHHHCCCEEEESCEEESH
T ss_pred             HHHHhcCCCceEEEECCCchhh
Confidence            2      248999999997643

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=94.93  E-value=0.051  Score=48.49  Aligned_cols=67  Identities=30%  Similarity=0.408  Sum_probs=47.1

Q ss_pred             HHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC-------------------CCHHhhhcc--
Q 027064          153 GCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT-------------------TDPESIVRE--  210 (229)
Q Consensus       153 av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t-------------------~~l~~~~~~--  210 (229)
                      .++..++..++ -.|.+|+|+|+|. ||..+++++...|| +|+.+.+..                   .+..+.+++  
T Consensus       170 ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~  247 (370)
T 4ej6_A          170 CCLHGVDLSGI-KAGSTVAILGGGV-IGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPV  247 (370)
T ss_dssp             HHHHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTT
T ss_pred             HHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhh
Confidence            33444555554 3699999999976 69999999999999 787774421                   233333333  


Q ss_pred             ------CcEEEEecCCC
Q 027064          211 ------ADIVIAAAGQA  221 (229)
Q Consensus       211 ------aDivisA~g~p  221 (229)
                            +|+||.++|.+
T Consensus       248 ~~~~gg~Dvvid~~G~~  264 (370)
T 4ej6_A          248 GLVPGGVDVVIECAGVA  264 (370)
T ss_dssp             SSSTTCEEEEEECSCCH
T ss_pred             hccCCCCCEEEECCCCH
Confidence                  79999998864

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=94.93  E-value=0.027  Score=47.36  Aligned_cols=36  Identities=31%  Similarity=0.410  Sum_probs=32.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN   40 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECC
Confidence            579999999999999999999999999999988653

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=94.92  E-value=0.04  Score=51.27  Aligned_cols=53  Identities=21%  Similarity=0.189  Sum_probs=43.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------------CCHHhhhcc---CcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------------TDPESIVRE---ADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------------~~l~~~~~~---aDivisA~g~p  221 (229)
                      ++|.|||.|.+ |.+++..|.+.|.+|+++++..                  .++.+.+..   +|+||.++..+
T Consensus         6 ~~IgvIG~G~m-G~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~   79 (474)
T 2iz1_A            6 ANFGVVGMAVM-GKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAG   79 (474)
T ss_dssp             BSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTT
T ss_pred             CcEEEEeeHHH-HHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCc
Confidence            57999999996 9999999999999999997732                  244455554   99999998764

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=94.91  E-value=0.022  Score=51.06  Aligned_cols=55  Identities=25%  Similarity=0.367  Sum_probs=43.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      ..++|.|||+|. ||.+++..|+.+|.  .|.+++...                         .+. +.+++||+||.+.
T Consensus        20 ~~~kV~ViGaG~-vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~-~~~~daDiVIita   97 (330)
T 3ldh_A           20 SYNKITVVGCDA-VGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY-SVSAGSKLVVITA   97 (330)
T ss_dssp             CCCEEEEESTTH-HHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS-CSCSSCSEEEECC
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH-HHhCCCCEEEEeC
Confidence            468999999977 69999999998886  788875421                         122 2388999999999


Q ss_pred             CCCC
Q 027064          219 GQAM  222 (229)
Q Consensus       219 g~p~  222 (229)
                      |.|.
T Consensus        98 G~p~  101 (330)
T 3ldh_A           98 GARQ  101 (330)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9875

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=94.89  E-value=0.05  Score=47.53  Aligned_cols=55  Identities=18%  Similarity=0.215  Sum_probs=41.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------------------CCHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------------------~~l~~~~~~aDivisA~g~  220 (229)
                      .+|+|||.|.+ |..++..|.+.|..|+++.+..                           .+..+....+|+||.|+..
T Consensus         3 mkI~IiGaGai-G~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~   81 (320)
T 3i83_A            3 LNILVIGTGAI-GSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV   81 (320)
T ss_dssp             CEEEEESCCHH-HHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred             CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence            58999999995 9999999999999999886532                           1122323478999999876


Q ss_pred             CCC
Q 027064          221 AMM  223 (229)
Q Consensus       221 p~~  223 (229)
                      ..+
T Consensus        82 ~~~   84 (320)
T 3i83_A           82 VEG   84 (320)
T ss_dssp             CTT
T ss_pred             CCh
Confidence            543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=94.88  E-value=0.027  Score=47.62  Aligned_cols=33  Identities=21%  Similarity=0.180  Sum_probs=30.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      .++|.|+|.|++.-+|+.++..|+++|++|.++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~   56 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVN   56 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence            368999999999999999999999999999876

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=94.88  E-value=0.023  Score=47.37  Aligned_cols=36  Identities=33%  Similarity=0.442  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||.++|.|++.-+|+.++..|+++|++|+++.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r   36 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYA   36 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            367999999999999999999999999999998866

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=94.87  E-value=0.031  Score=47.39  Aligned_cols=37  Identities=19%  Similarity=0.350  Sum_probs=32.5

Q ss_pred             CCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +++||.++|.|++  .-+|+.++..|+++|++|+++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~   41 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN   41 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            3689999999997  667999999999999999988664

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=94.87  E-value=0.035  Score=48.22  Aligned_cols=54  Identities=22%  Similarity=0.394  Sum_probs=41.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-------C-----------------HHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-------D-----------------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-------~-----------------l~~~~~~aDivisA~g~p  221 (229)
                      .+|+|||+|. +|.+++..|...|.  .|+++++...       +                 -.+.++.||+||.++|.|
T Consensus         8 mkI~IiGaG~-vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~~   86 (319)
T 1lld_A            8 TKLAVIGAGA-VGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR   86 (319)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCCC
Confidence            6899999987 59999999999998  8998865321       0                 013356799999999876


Q ss_pred             C
Q 027064          222 M  222 (229)
Q Consensus       222 ~  222 (229)
                      .
T Consensus        87 ~   87 (319)
T 1lld_A           87 Q   87 (319)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=94.86  E-value=0.051  Score=47.92  Aligned_cols=55  Identities=25%  Similarity=0.410  Sum_probs=42.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCC-----------------------CCHHhhhccCcEEEEecCCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHT-----------------------TDPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t-----------------------~~l~~~~~~aDivisA~g~p~~  223 (229)
                      +|+|||+++.||.+++..|+..+  -.|.+++...                       .++.+.++.||+||.+.|.|.-
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~~   81 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRK   81 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCCC
Confidence            79999994447999999999887  4677774321                       2355568999999999998753

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=94.85  E-value=0.036  Score=45.58  Aligned_cols=31  Identities=32%  Similarity=0.341  Sum_probs=29.0

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      ||.++|.|++.-+|+.++..|+++|++|+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~   31 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVN   31 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence            6899999999999999999999999999884

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=94.85  E-value=0.02  Score=47.67  Aligned_cols=36  Identities=22%  Similarity=0.361  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++||+|+|.|++.-+|+.++..|+++|++|+++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r   39 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR   39 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC
Confidence            468999999999999999999999999999998876

>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}

Probab=94.85  E-value=0.03  Score=52.58  Aligned_cols=53  Identities=26%  Similarity=0.313  Sum_probs=44.2

Q ss_pred             cccCCHHHHHHHH----HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcC
Q 027064          146 FLPCTPKGCLELL----KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL----~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~  199 (229)
                      -.+.|.+|+...+    ++.+.+++||+|+|-|.|+ ||..++.+|.+.||+|+ ++++
T Consensus       227 r~~aTg~Gv~~~~~~~l~~~G~~l~g~~vaVqG~Gn-VG~~~a~~L~~~GakvVavsD~  284 (470)
T 2bma_A          227 RVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGN-VALYCVQKLLHLNVKVLTLSDS  284 (470)
T ss_dssp             TTTHHHHHHHHHHHHHHHTTTCCGGGCEEEEECSSH-HHHHHHHHHHHTTCEECEEEET
T ss_pred             ccccchHHHHHHHHHHHHhccCCcCCCEEEEECCcH-HHHHHHHHHHHCCCEEEEEEeC
Confidence            3468988887654    4568889999999999998 69999999999999865 7765

>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E

Probab=94.85  E-value=0.049  Score=50.87  Aligned_cols=51  Identities=27%  Similarity=0.264  Sum_probs=42.6

Q ss_pred             cccCCHHHHHHH----HHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          146 FLPCTPKGCLEL----LKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       146 ~~PcTa~av~~l----L~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      --++|.+|++..    +++.+.+++||+|+|=|.|+ ||..++.+|.+.||+|..+
T Consensus       210 r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~Gn-VG~~aa~~L~e~GakvVav  264 (450)
T 4fcc_A          210 RPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGN-VAQYAIEKAMEFGARVITA  264 (450)
T ss_dssp             TTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEE
T ss_pred             CCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCCCh-HHHHHHHHHHhcCCeEEEE
Confidence            346788887654    45568899999999999999 5999999999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	229
d1edza2	146	c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/	6e-41
d1b0aa2	121	c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/	1e-34
d1a4ia2	125	c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/	1e-34
d1a4ia1	170	c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehy	3e-23
d1b0aa1	166	c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehy	1e-20
d1edza1	171	c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehy	2e-19

>d1edza2 c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  135 bits (340), Expect = 6e-41
 Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 6/148 (4%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEV 67
              I    VA+T  +EI   V    + + G+ P L   +      ++ Y +  +K    +
Sbjct: 3   GRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESM 62

Query: 68  GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127
           G +     + ++     L   + + N    V+GI+V  P+  +  ++ +   +  EKDV+
Sbjct: 63  GFRYDLRVIEDKD---FLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVE 119

Query: 128 GFHPLNIGKLAMKGRDPLFLPCTPKGCL 155
           G + +    L                 +
Sbjct: 120 GLNHVYYQNLYH--NVRYLDKENRLKSI 145

>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} Length = 121

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

 Score =  117 bits (295), Expect = 1e-34
 Identities = 64/120 (53%), Positives = 78/120 (65%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
           A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG    SQ YV+ KRKAC EVG
Sbjct: 2   AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVG 61

Query: 69  IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
             S   DLPE  SEAEL+  +  LN    + GILVQLPLP  I+  KVL  I  +KDVDG
Sbjct: 62  FVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG 121

>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 1e-34
 Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 3/123 (2%)

Query: 9   ATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEV 67
           A I++GK ++  IR+ +  +V  L E+  G  P LA++ VG R DS  Y+++K KA  E+
Sbjct: 3   AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 62

Query: 68  GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKH--INEEKVLGEISLEKD 125
           GIK+  I LP   +E+E++  +  LN    VHG LVQLPL     IN E+V+  I+ EKD
Sbjct: 63  GIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKD 122

Query: 126 VDG 128
           VDG
Sbjct: 123 VDG 125

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.8 bits (222), Expect = 3e-23
 Identities = 49/97 (50%), Positives = 62/97 (63%)

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
              +N G+LA    +  F+PCTPKGCLEL+K +GV I G+ AVVVGRS IVG P+  LLL
Sbjct: 1   LTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLL 60

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
             +ATVT  HS T   +  V + DI++ A GQ  MV 
Sbjct: 61  WNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVK 97

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

 Score = 83.2 bits (205), Expect = 1e-20
 Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 2/97 (2%)

Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188
           FHP N+G+L    R P   PCTP+G + LL+R  +   G  AVV+G SNIVG P+S+ LL
Sbjct: 1   FHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELL 58

Query: 189 KADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVT 225
            A  T T+ H  T +    V  AD++I A G+   + 
Sbjct: 59  LAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIP 95

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.8 bits (196), Expect = 2e-19
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 34/110 (30%)

Query: 148 PCTPKGCLELLKR---------SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198
           PCTP   +++L+           G  + GK+ +V+ RS IVG P++ LL    ATV  V 
Sbjct: 1   PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVD 60

Query: 199 SHTTD-------------------------PESIVREADIVIAAAGQAMM 223
            +                             +    ++D+VI        
Sbjct: 61  VNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENY 110

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	229
d1edza2	146	Tetrahydrofolate dehydrogenase/cyclohydrolase {Bak	100.0
d1b0aa2	121	Tetrahydrofolate dehydrogenase/cyclohydrolase {Esc	100.0
d1a4ia2	125	Tetrahydrofolate dehydrogenase/cyclohydrolase {Hum	100.0
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	100.0
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	100.0
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	99.93
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	99.07
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	98.88
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	98.85
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.6
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.44
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.43
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	98.35
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	98.29
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	98.27
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	98.1
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.89
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	97.72
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	97.69
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.68
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.65
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.6
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	97.57
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.57
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	97.51
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.45
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.44
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	97.38
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.37
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	97.34
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	97.3
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.29
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.24
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	97.22
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.14
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.13
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	97.12
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.1
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.07
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.07
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.06
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	97.04
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.01
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	96.99
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.97
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.96
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.9
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.88
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.87
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.87
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.86
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.86
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.85
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.85
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.83
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.8
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.8
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.79
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.77
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.77
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.76
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.73
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.71
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.71
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.69
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	96.68
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.67
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	96.67
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.67
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	96.66
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.66
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.65
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.63
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.62
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.62
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.62
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.6
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.58
d1vi2a2	102	Putative shikimate dehydrogenase YdiB {Escherichia	96.58
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.57
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.57
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	96.57
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.56
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.53
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.53
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.52
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.52
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.5
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.5
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.49
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.47
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.45
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.44
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.44
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	96.44
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.43
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.42
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.42
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.41
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.41
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.39
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.38
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.37
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.36
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.32
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.31
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.31
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.3
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.29
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.26
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.24
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.23
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.22
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.18
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.17
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.16
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.14
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.14
d1nyta2	101	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.13
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	96.12
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.1
d1npya2	102	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.07
d1p77a2	101	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.06
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.06
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	96.05
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.05
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	96.02
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	96.01
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.0
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.99
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	95.97
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	95.97
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	95.96
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.96
d1tuga1	310	Aspartate carbamoyltransferase catalytic subunit {	95.96
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.94
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	95.93
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.89
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.88
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.87
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	95.85
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	95.85
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	95.83
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	95.82
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.81
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.77
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	95.71
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.71
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	95.62
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	95.61
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.6
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	95.6
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.58
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	95.55
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.53
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	95.53
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	95.49
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.49
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.49
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.48
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	95.45
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.45
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	95.43
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.43
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.43
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	95.42
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.4
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.39
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	95.38
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.37
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.35
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.33
d1nvta2	110	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.33
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	95.32
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.32
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.24
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.22
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.17
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	95.06
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.04
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	95.01
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.0
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	94.98
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	94.96
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.96
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.93
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.87
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	94.84
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.84
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	94.81
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	94.8
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	94.78
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	94.75
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.71
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	94.64
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.62
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.6
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	94.59
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	94.56
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	94.56
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.45
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	94.4
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.3
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	94.26
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.24
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	94.19
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	94.15
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.13
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.13
d1o0sa1	308	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	94.11
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.1
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	94.07
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	94.07
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	94.06
d1gq2a1	298	Mitochondrial NAD(P)-dependent malic enzyme {Domes	93.99
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	93.97
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	93.87
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.84
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	93.83
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.82
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.81
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	93.76
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	93.75
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.74
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	93.69
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	93.61
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	93.59
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	93.55
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	93.54
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	93.51
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	93.5
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	93.48
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	93.32
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	93.26
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	93.24
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	93.24
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	93.23
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	93.12
d1ml4a2	157	Aspartate carbamoyltransferase catalytic subunit {	93.11
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.03
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	92.95
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.95
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.92
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	92.79
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	92.75
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	92.64
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	92.54
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	92.4
d1dxha2	185	Ornithine transcarbamoylase {Pseudomonas aeruginos	92.4
d1otha2	170	Ornithine transcarbamoylase {Human (Homo sapiens)	92.35
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	92.34
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.33
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.33
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.33
d1mv8a3	136	GDP-mannose 6-dehydrogenase, GDP-binding domain {P	92.28
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.26
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	92.06
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.01
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.0
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	91.98
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.98
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	91.93
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	91.91
d1pg5a2	153	Aspartate carbamoyltransferase catalytic subunit {	91.82
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	91.78
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	91.61
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.48
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	91.32
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	91.22
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	91.17
d2at2a2	151	Aspartate carbamoyltransferase catalytic subunit {	91.05
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	91.04
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.98
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	90.81
d7reqa2	168	Methylmalonyl-CoA mutase alpha subunit, C-terminal	90.79
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.71
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	90.69
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	90.6
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	90.55
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.52
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	90.45
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.16
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.09
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	89.92
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	89.83
d1duvg2	183	Ornithine transcarbamoylase {Escherichia coli [Tax	89.7
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.56
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	89.54
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	89.51
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	89.3
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.27
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	89.09
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	89.05
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	89.03
d1ekxa2	160	Aspartate carbamoyltransferase catalytic subunit {	88.67
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	88.64
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	88.53
d1dlja3	108	UDP-glucose dehydrogenase (UDPGDH), C-terminal (UD	88.3
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	88.28
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	88.24
d1dcfa_	134	Receiver domain of the ethylene receptor {Thale cr	88.19
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	88.16
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	87.95
d2h1qa1	251	Hypothetical protein Dhaf_3308 {Desulfitobacterium	87.91
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	87.89
d1f4pa_	147	Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]}	87.84
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	87.77
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	87.61
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.36
d1o4va_	169	N5-CAIR mutase (phosphoribosylaminoimidazole carbo	87.26
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	87.06
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	86.84
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	86.69
d1u11a_	159	N5-CAIR mutase (phosphoribosylaminoimidazole carbo	86.55
d1vmea1	148	ROO-like flavoprotein TM0755, C-terminal domain {T	86.07
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	86.0
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	85.63
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	85.61
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	85.48
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	85.23
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	85.0
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	84.94
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	84.31
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	84.19
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	84.08
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	83.38
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.92
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	82.73
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.46
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	82.44
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	82.22
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	82.21
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	82.17
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.05
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	81.89
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	81.44
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	81.35
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	81.19
d1xmpa_	155	N5-CAIR mutase (phosphoribosylaminoimidazole carbo	80.86
d1qcza_	163	N5-CAIR mutase (phosphoribosylaminoimidazole carbo	80.72
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	80.64
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	80.55

>d1edza2 c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-45  Score=297.33  Aligned_cols=142  Identities=18%  Similarity=0.202  Sum_probs=133.6

Q ss_pred             hhhcccHHHHHHHHHHHHHHHHHHHhcC-CCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            9 ATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         9 ~~il~G~~la~~i~~~i~~~~~~l~~~~-~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      +++|+|+++|++++++++++++.|+++. |++|+|++|+||+|++|.+|+++|.|+|+++||+++.   ++..+++++++
T Consensus         3 gkiidG~~iA~~i~~~l~~~v~~l~~~~~g~~P~Lavilvg~d~aS~~Yv~~k~k~a~~~Gi~~~l---~~~~~~~~l~~   79 (146)
T d1edza2           3 GRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDL---RVIEDKDFLEE   79 (146)
T ss_dssp             CEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECCCCHHHHHHHHHHHHHHHHHTCEEEE---EECSSGGGHHH
T ss_pred             CeeccHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCcccc---CccchHHHHHH
Confidence            5689999999999999999999998764 7999999999999999999999999999999998764   45567899999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHH
Q 027064           88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCL  155 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~  155 (229)
                      .|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+||.|  .+++.||||+||+
T Consensus        80 ~I~~LN~D~~V~GIlvQlPLP~~i~~~~i~~~I~p~KDVDGl~p~N~G~L~~~--~~~l~P~t~~~~i  145 (146)
T d1edza2          80 AIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEGLNHVYYQNLYHN--VRYLDKENRLKSI  145 (146)
T ss_dssp             HHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTBTTCCSHHHHHHHHTT--CCBSSSSSCSBCC
T ss_pred             HHHHHhcchhhhhhhhcCCCCcccCHHHHHHhcCCCCCcCCCChHhHHHHHcC--CCCCCCCCccCcc
Confidence            99999999999999999999999999999999999999999999999999998  7889999998864

>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-39  Score=254.26  Aligned_cols=120  Identities=53%  Similarity=0.756  Sum_probs=118.0

Q ss_pred             hhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHH
Q 027064            9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISK   88 (229)
Q Consensus         9 ~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~   88 (229)
                      |+|||||++|+.++++++++++.++++++++|+|++|++|+|++|..|+++|.|.|+++||+++.++||+++++++|++.
T Consensus         2 A~iLdGk~vA~~i~~~l~~~i~~~~~~~~~~P~LavI~vg~d~aS~~Yv~~k~k~a~~lGi~~~~~~l~~~~t~~~l~~~   81 (121)
T d1b0aa2           2 AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLEL   81 (121)
T ss_dssp             CEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCHHHHHHH
T ss_pred             CEeccHHHHHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCChhHHHHHHHHHHHHHhhccceeeeeccccccHHHHHHH
Confidence            68999999999999999999999998878899999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccc
Q 027064           89 VHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG  128 (229)
Q Consensus        89 I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg  128 (229)
                      |++||+|++|||||||+|||+|+|++.++++|+|+|||||
T Consensus        82 I~~lN~d~~v~GIlvqlPLP~~i~~~~i~~~I~p~KDVDG  121 (121)
T d1b0aa2          82 IDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG  121 (121)
T ss_dssp             HHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTC
T ss_pred             HHHHhCCCchhhhhhcCCCCCCcCHHHHHhccCcCcCCCC
Confidence            9999999999999999999999999999999999999998

>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=250.84  Aligned_cols=120  Identities=44%  Similarity=0.712  Sum_probs=117.0

Q ss_pred             hhhcccHHHHHHHHHHHHHHHHHHHhcC-CCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064            9 ATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS   87 (229)
Q Consensus         9 ~~il~G~~la~~i~~~i~~~~~~l~~~~-~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   87 (229)
                      |+|||||++|++|+++++++++.|+++. |++|+|++|++|+|++|..|+++|.|+|+++||+++.++||+++++++|++
T Consensus         3 a~iLdGk~vA~~i~~~lk~~v~~l~~~~~g~~P~LavIlvg~d~aS~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~el~~   82 (125)
T d1a4ia2           3 AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMK   82 (125)
T ss_dssp             CEECCHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHH
T ss_pred             CEEeehHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCChhHHHHHHHHHHHHHhccceEEEEecCcchhHHHHHH
Confidence            6799999999999999999999999875 789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCCCCCC--CCHHHHHhcCCccCcccc
Q 027064           88 KVHELNVMPDVHGILVQLPLPKH--INEEKVLGEISLEKDVDG  128 (229)
Q Consensus        88 ~I~~lN~d~~v~GIlvq~Plp~~--i~~~~i~~~I~p~KDVDg  128 (229)
                      .|++||+|++|||||||+|||+|  +|+++++++|+|.|||||
T Consensus        83 ~I~~lN~d~~V~GIlvqlPLP~~~~~~~~~i~~~I~p~KDVDG  125 (125)
T d1a4ia2          83 YITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDG  125 (125)
T ss_dssp             HHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTC
T ss_pred             HHHHHhccCCcceEEEecCCCCCCCcCHHHHHhcCCCCcCCCC
Confidence            99999999999999999999986  999999999999999998

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-34  Score=236.19  Aligned_cols=99  Identities=40%  Similarity=0.688  Sum_probs=97.0

Q ss_pred             cCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhh
Q 027064          129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIV  208 (229)
Q Consensus       129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~  208 (229)
                      |||.|+|+|+.|  ++.|+||||+||++||++|+++++||+|+|||||++||+|++.||+++|||||+||++|+++.+++
T Consensus         1 fhp~N~G~l~~~--~~~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~   78 (166)
T d1b0aa1           1 FHPYNVGRLCQR--APRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV   78 (166)
T ss_dssp             CSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred             CCchhHHHHhCC--CCCCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHH
Confidence            799999999998  689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcEEEEecCCCCCCCCCCC
Q 027064          209 READIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       209 ~~aDivisA~g~p~~i~~~~v  229 (229)
                      ++|||||+|+|+|++|+++|+
T Consensus        79 ~~ADivI~a~G~p~~i~~~~v   99 (166)
T d1b0aa1          79 ENADLLIVAVGKPGFIPGDWI   99 (166)
T ss_dssp             HHCSEEEECSCCTTCBCTTTS
T ss_pred             hhhhHhhhhccCccccccccc
Confidence            999999999999999999996

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-33  Score=232.76  Aligned_cols=101  Identities=49%  Similarity=0.765  Sum_probs=97.9

Q ss_pred             cCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhh
Q 027064          129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIV  208 (229)
Q Consensus       129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~  208 (229)
                      +|++|+|+|+.|+.+++|+||||+||++||++|+++++||+|+|||||++||||++.||+++||||++||++|+++.+++
T Consensus         1 l~~~N~G~l~~g~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~   80 (170)
T d1a4ia1           1 LTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEV   80 (170)
T ss_dssp             CSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred             CCccchhhHhcCCCCCCCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHH
Confidence            68999999999865689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcEEEEecCCCCCCCCCCC
Q 027064          209 READIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       209 ~~aDivisA~g~p~~i~~~~v  229 (229)
                      ++|||+|+|+|+|++++++|+
T Consensus        81 ~~aDivi~a~G~~~~i~~~~v  101 (170)
T d1a4ia1          81 NKGDILVVATGQPEMVKGEWI  101 (170)
T ss_dssp             TTCSEEEECCCCTTCBCGGGS
T ss_pred             hhccchhhccccccccccccc
Confidence            999999999999999999986

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=6.8e-27  Score=192.07  Aligned_cols=82  Identities=28%  Similarity=0.470  Sum_probs=76.9

Q ss_pred             cCCHHHHHHHHHHhCC---------CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---------------
Q 027064          148 PCTPKGCLELLKRSGV---------TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---------------  203 (229)
Q Consensus       148 PcTa~av~~lL~~~~~---------~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---------------  203 (229)
                      ||||.||++||++|++         +++||+|+|||||++||+|+|.||+++|||||+||+++.+               
T Consensus         1 PcTp~gv~~LL~~y~I~~~~~~~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~   80 (171)
T d1edza1           1 PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHV   80 (171)
T ss_dssp             CHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEE
T ss_pred             CCcHHHHHHHHHHcCcccccccccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeecc
Confidence            9999999999999988         8999999999999999999999999999999999987632               


Q ss_pred             ----------HHhhhccCcEEEEecCCCCC-CCCCCC
Q 027064          204 ----------PESIVREADIVIAAAGQAMM-VTMGIL  229 (229)
Q Consensus       204 ----------l~~~~~~aDivisA~g~p~~-i~~~~v  229 (229)
                                +.+++++|||||+|+|+|+| ++.||+
T Consensus        81 ~~~~~~~~~~lk~~~~~aDIvIsavG~p~~~i~~d~i  117 (171)
T d1edza1          81 EDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYI  117 (171)
T ss_dssp             EEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTS
T ss_pred             ccccccchhHHhhccccCCEEEEccCCCccccChhhc
Confidence                      66778899999999999999 999996

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=99.07  E-value=4e-11  Score=95.67  Aligned_cols=80  Identities=18%  Similarity=0.257  Sum_probs=68.0

Q ss_pred             cCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-----------------CHHhhhc
Q 027064          148 PCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-----------------DPESIVR  209 (229)
Q Consensus       148 PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-----------------~l~~~~~  209 (229)
                      ...+.++++++++...++++|+|+|||+|++ |+.++..|..+|+ .+++++|+..                 ++.+.+.
T Consensus         5 vSv~~aAv~la~~~~~~l~~~~ilviGaG~~-g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~   83 (159)
T d1gpja2           5 VSIGSAAVELAERELGSLHDKTVLVVGAGEM-GKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLA   83 (159)
T ss_dssp             CSHHHHHHHHHHHHHSCCTTCEEEEESCCHH-HHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHH
T ss_pred             ccHHHHHHHHHHHHhCCcccCeEEEECCCHH-HHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhc
Confidence            3457889999999877999999999999996 9999999999999 6999988531                 4557789


Q ss_pred             cCcEEEEecCCCCC-CCCCC
Q 027064          210 EADIVIAAAGQAMM-VTMGI  228 (229)
Q Consensus       210 ~aDivisA~g~p~~-i~~~~  228 (229)
                      ++||||+||+.|++ |+.+|
T Consensus        84 ~~Divi~atss~~~ii~~~~  103 (159)
T d1gpja2          84 RSDVVVSATAAPHPVIHVDD  103 (159)
T ss_dssp             TCSEEEECCSSSSCCBCHHH
T ss_pred             cCCEEEEecCCCCccccHhh
Confidence            99999999999987 46543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=98.88  E-value=1e-09  Score=87.92  Aligned_cols=73  Identities=22%  Similarity=0.313  Sum_probs=63.1

Q ss_pred             HHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-------------CCCHHhhhccCcEEEEecCCC
Q 027064          155 LELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-------------TTDPESIVREADIVIAAAGQA  221 (229)
Q Consensus       155 ~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-------------t~~l~~~~~~aDivisA~g~p  221 (229)
                      -.+++.++.-+.||+++|+|.|. |||.+|..|...||.|+++...             ...+.+.++.||++|+|||.+
T Consensus        11 d~i~r~t~~~laGk~vvV~GYG~-vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~~~~a~~~aDi~vTaTGn~   89 (163)
T d1v8ba1          11 DGLMRATDFLISGKIVVICGYGD-VGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNV   89 (163)
T ss_dssp             HHHHHHHCCCCTTSEEEEECCSH-HHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSS
T ss_pred             HHHHHHhCceecCCEEEEecccc-cchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCchhHccccCcEEEEcCCCC
Confidence            44566778999999999999999 5999999999999999999552             236779999999999999999


Q ss_pred             CCCCCCC
Q 027064          222 MMVTMGI  228 (229)
Q Consensus       222 ~~i~~~~  228 (229)
                      +.|+.++
T Consensus        90 ~vI~~~h   96 (163)
T d1v8ba1          90 DVIKLEH   96 (163)
T ss_dssp             SSBCHHH
T ss_pred             ccccHHH
Confidence            9887653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=1.4e-09  Score=87.34  Aligned_cols=72  Identities=25%  Similarity=0.291  Sum_probs=63.0

Q ss_pred             HHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-------------CCCHHhhhccCcEEEEecCCCC
Q 027064          156 ELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-------------TTDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       156 ~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-------------t~~l~~~~~~aDivisA~g~p~  222 (229)
                      .+++..+..+.||+|+|+|.|. |||.+|..|...||.|+++...             +..+.+.++.||++|+|||.++
T Consensus        13 ~~~r~t~~~l~Gk~v~V~GyG~-iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~~~~~a~~~adivvtaTGn~~   91 (163)
T d1li4a1          13 GIKRATDVMIAGKVAVVAGYGD-VGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIFVTTTGCID   91 (163)
T ss_dssp             HHHHHHCCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSC
T ss_pred             HHHHHhCceecCCEEEEecccc-ccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEeeehhhhhhhccEEEecCCCcc
Confidence            5666789999999999999999 5999999999999999999663             2367788999999999999999


Q ss_pred             CCCCCC
Q 027064          223 MVTMGI  228 (229)
Q Consensus       223 ~i~~~~  228 (229)
                      .|+.++
T Consensus        92 vI~~eh   97 (163)
T d1li4a1          92 IILGRH   97 (163)
T ss_dssp             SBCHHH
T ss_pred             chhHHH
Confidence            987654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.60  E-value=2.3e-08  Score=80.70  Aligned_cols=74  Identities=27%  Similarity=0.371  Sum_probs=60.1

Q ss_pred             cCCHHHHHHHH-HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------------------
Q 027064          148 PCTPKGCLELL-KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------------------  202 (229)
Q Consensus       148 PcTa~av~~lL-~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------------------  202 (229)
                      ++|+.|.+..+ +..+.+|+||+|+|.|++.-+|+.++..|+++|++|+++.++..                        
T Consensus         3 ~~~~~~~v~~~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~   82 (191)
T d1luaa1           3 NTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD   82 (191)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS
T ss_pred             CccHHHHHHHHHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhccc
Confidence            34556666666 66689999999999998888899999999999999999977421                        


Q ss_pred             --CHHhhhccCcEEEEecCCC
Q 027064          203 --DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       203 --~l~~~~~~aDivisA~g~p  221 (229)
                        ++.+.+.++|+||+++|.+
T Consensus        83 ~~~~~~~~~~iDilin~Ag~g  103 (191)
T d1luaa1          83 DASRAEAVKGAHFVFTAGAIG  103 (191)
T ss_dssp             HHHHHHHTTTCSEEEECCCTT
T ss_pred             HHHHHHHhcCcCeeeecCccc
Confidence              2346688999999999864

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.44  E-value=2.9e-07  Score=73.59  Aligned_cols=68  Identities=19%  Similarity=0.264  Sum_probs=57.5

Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCCCH--------------------------
Q 027064          152 KGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTTDP--------------------------  204 (229)
Q Consensus       152 ~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~~l--------------------------  204 (229)
                      .|.++.|++.+++++||+|+|+|+|++ ||+++..|...|+ ++++++|+....                          
T Consensus         3 ~Gf~~~l~~~~~~l~~k~vlIlGaGGa-arai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   81 (182)
T d1vi2a1           3 TGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ   81 (182)
T ss_dssp             HHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH
T ss_pred             HHHHHHHHHcCCCcCCCEEEEECCcHH-HHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc
Confidence            688899999999999999999999996 9999999999999 799998864321                          


Q ss_pred             ---HhhhccCcEEEEecCC
Q 027064          205 ---ESIVREADIVIAAAGQ  220 (229)
Q Consensus       205 ---~~~~~~aDivisA~g~  220 (229)
                         .+.+..+|+||++|+.
T Consensus        82 ~~~~~~~~~~diiIN~Tp~  100 (182)
T d1vi2a1          82 QAFAEALASADILTNGTKV  100 (182)
T ss_dssp             HHHHHHHHTCSEEEECSST
T ss_pred             cchhhhhcccceeccccCC
Confidence               1235689999999973

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.43  E-value=2e-07  Score=73.72  Aligned_cols=68  Identities=28%  Similarity=0.314  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC------------------HH-hhhccC
Q 027064          151 PKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD------------------PE-SIVREA  211 (229)
Q Consensus       151 a~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~------------------l~-~~~~~a  211 (229)
                      ..|.++-|++.+++++||+|+|+|+|++ +|+++..|.+.|+.|++++|+...                  .. ....++
T Consensus         2 g~Gf~~~l~~~~~~~~~k~vlIlGaGGa-arai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~   80 (170)
T d1nyta1           2 GVGLLSDLERLSFIRPGLRILLIGAGGA-SRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEF   80 (170)
T ss_dssp             HHHHHHHHHHHTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCC
T ss_pred             HhHHHHHHHHcCCCCCCCEEEEECCcHH-HHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccccccccc
Confidence            3688899999999999999999999997 999999999999999999885321                  10 124568


Q ss_pred             cEEEEecC
Q 027064          212 DIVIAAAG  219 (229)
Q Consensus       212 DivisA~g  219 (229)
                      |+||+||.
T Consensus        81 dliIN~Tp   88 (170)
T d1nyta1          81 DLIINATS   88 (170)
T ss_dssp             SEEEECCS
T ss_pred             ceeecccc
Confidence            99999985

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=98.35  E-value=2.8e-07  Score=72.97  Aligned_cols=68  Identities=13%  Similarity=0.195  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCCC---HH----------hhhccCcEEEE
Q 027064          151 PKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTTD---PE----------SIVREADIVIA  216 (229)
Q Consensus       151 a~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~~---l~----------~~~~~aDivis  216 (229)
                      ..|+.++|++++++ ++|+|+|+|+|++ +|.++..|.+.|+ .+++++|....   +.          ....++|+||+
T Consensus         2 ~~G~~~~l~~~~~~-~~~~vlIlGaGGa-arai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~~~~~DliIN   79 (167)
T d1npya1           2 YIAIVKLIEKYHLN-KNAKVIVHGSGGM-AKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLENQQADILVN   79 (167)
T ss_dssp             HHHHHHHHHHTTCC-TTSCEEEECSSTT-HHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTTCCCSEEEE
T ss_pred             hHHHHHHHHHcCCC-CCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcccccchhhhee
Confidence            36899999999998 8999999999996 9999999999998 79999885321   11          12467899999


Q ss_pred             ecCC
Q 027064          217 AAGQ  220 (229)
Q Consensus       217 A~g~  220 (229)
                      ||+.
T Consensus        80 aTpi   83 (167)
T d1npya1          80 VTSI   83 (167)
T ss_dssp             CSST
T ss_pred             cccc
Confidence            9873

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.29  E-value=6.7e-07  Score=70.99  Aligned_cols=68  Identities=21%  Similarity=0.236  Sum_probs=56.8

Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------------------CHHhh
Q 027064          152 KGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------------------DPESI  207 (229)
Q Consensus       152 ~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------------------~l~~~  207 (229)
                      .|+++-|++++.+++||+|+|+|+|++ +|+++..|.+.| .|++.+|...                        ++...
T Consensus         3 ~G~~~~l~~~~~~~~~k~vlIlGaGG~-arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (177)
T d1nvta1           3 IGARMALEEEIGRVKDKNIVIYGAGGA-ARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVD   80 (177)
T ss_dssp             HHHHHHHHHHHCCCCSCEEEEECCSHH-HHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCC
T ss_pred             HHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhc
Confidence            688999999999999999999999996 999999998766 8999988632                        12234


Q ss_pred             hccCcEEEEecCCC
Q 027064          208 VREADIVIAAAGQA  221 (229)
Q Consensus       208 ~~~aDivisA~g~p  221 (229)
                      ...+|++|++|..+
T Consensus        81 ~~~~dliIn~tp~g   94 (177)
T d1nvta1          81 LDGVDIIINATPIG   94 (177)
T ss_dssp             CTTCCEEEECSCTT
T ss_pred             cchhhhhccCCccc
Confidence            57789999999854

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=98.27  E-value=4.1e-07  Score=72.36  Aligned_cols=68  Identities=19%  Similarity=0.252  Sum_probs=56.8

Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH-------------------hhhccCc
Q 027064          152 KGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE-------------------SIVREAD  212 (229)
Q Consensus       152 ~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~-------------------~~~~~aD  212 (229)
                      .|.++-|++++++++||+|+|+|+|++ +|+++..|.+.+..|++++|+....+                   ..+..+|
T Consensus         3 ~Gf~~~l~~~~~~~~~k~vlIlGaGGa-arai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~d   81 (171)
T d1p77a1           3 IGLVTDLQRLNWLRPNQHVLILGAGGA-TKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYD   81 (171)
T ss_dssp             HHHHHHHHHTTCCCTTCEEEEECCSHH-HHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCS
T ss_pred             HHHHHHHHHcCCCCCCCEEEEECCcHH-HHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccccccccc
Confidence            678888999999999999999999997 99999999988889999998642111                   1246789


Q ss_pred             EEEEecCC
Q 027064          213 IVIAAAGQ  220 (229)
Q Consensus       213 ivisA~g~  220 (229)
                      +||+||+.
T Consensus        82 iiIN~tp~   89 (171)
T d1p77a1          82 LVINATSA   89 (171)
T ss_dssp             EEEECCCC
T ss_pred             eeeecccc
Confidence            99999874

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=98.10  E-value=2.3e-06  Score=61.12  Aligned_cols=58  Identities=24%  Similarity=0.426  Sum_probs=48.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC-----------------HHhhhccCcEEEEecCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD-----------------PESIVREADIVIAAAGQAM  222 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~-----------------l~~~~~~aDivisA~g~p~  222 (229)
                      +++||+|+|+|.|.. |+.+|.+|.++|+.|++++.+...                 -...+...|.||...|.|.
T Consensus         2 ~~~~K~v~ViGlG~s-G~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~SPGi~~   76 (93)
T d2jfga1           2 DYQGKNVVIIGLGLT-GLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIAL   76 (93)
T ss_dssp             CCTTCCEEEECCSHH-HHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCCHHHHHHCSEEEECTTSCT
T ss_pred             CcCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccchhhhccCCEEEECCCCCC
Confidence            579999999999998 999999999999999999875421                 1245678899999888763

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.89  E-value=6e-06  Score=63.36  Aligned_cols=53  Identities=19%  Similarity=0.236  Sum_probs=43.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------------CHHhhhccCcEEEEecC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------------~l~~~~~~aDivisA~g  219 (229)
                      ++|+|+|||+|.+ |+++|..|.++|..|++++++..                       .+...+..+|+++++++
T Consensus         1 ~~K~IliiGaG~~-G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           1 ATKSVLMLGSGFV-TRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CCCEEEEECCSTT-HHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence            4799999999985 99999999999999999987532                       13355778898888875

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=97.72  E-value=2.7e-05  Score=63.52  Aligned_cols=75  Identities=24%  Similarity=0.368  Sum_probs=55.2

Q ss_pred             CCHHHHHHHHHH----hCC-CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhh-hc
Q 027064          149 CTPKGCLELLKR----SGV-TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESI-VR  209 (229)
Q Consensus       149 cTa~av~~lL~~----~~~-~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~-~~  209 (229)
                      +|++|+..-++.    .+. +|+||+|+|-|-|. ||..+|.+|.+.|++|++++....             +..+. -.
T Consensus         4 ~Ta~Gv~~~~~~~~~~~g~~~L~gk~v~IqG~G~-VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~~~~~~~~   82 (201)
T d1c1da1           4 TTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGA-VGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLST   82 (201)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGC
T ss_pred             chHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccCccccccc
Confidence            577777766654    465 69999999999999 699999999999999999976432             22233 33


Q ss_pred             cCcEEEEecCCCCCCC
Q 027064          210 EADIVIAAAGQAMMVT  225 (229)
Q Consensus       210 ~aDivisA~g~p~~i~  225 (229)
                      .+||++-|. ..+.|+
T Consensus        83 ~~DI~iPcA-~~~~I~   97 (201)
T d1c1da1          83 PCDVFAPCA-MGGVIT   97 (201)
T ss_dssp             CCSEEEECS-CSCCBC
T ss_pred             cceeeeccc-cccccc
Confidence            689888553 234443

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=97.69  E-value=3.3e-05  Score=62.64  Aligned_cols=57  Identities=18%  Similarity=0.251  Sum_probs=49.7

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-----------CCHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-----------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-----------~~l~~~~~~aDivisA~g  219 (229)
                      +.++.||+|.|||.|.+ |+.+|.+|..-|++|..++...           .++.+.+++||+|+.+.+
T Consensus        38 g~el~gk~vgIiG~G~I-G~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l~~sDii~~~~p  105 (197)
T d1j4aa1          38 GREVRDQVVGVVGTGHI-GQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVP  105 (197)
T ss_dssp             BCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSC
T ss_pred             CccccCCeEEEeccccc-chhHHHhHhhhcccccccCcccccccccceeeeccccccccccccccccCC
Confidence            56789999999999996 9999999999999999887542           267889999999998865

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.68  E-value=2.1e-05  Score=57.70  Aligned_cols=58  Identities=21%  Similarity=0.326  Sum_probs=46.0

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CCCH-----------------HhhhccCcEEEEecCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TTDP-----------------ESIVREADIVIAAAGQA  221 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~~l-----------------~~~~~~aDivisA~g~p  221 (229)
                      .+++||+|+|||.|.+ |..-+..|++.||.|++.... ++.+                 .+.+..+|+|+.|++.+
T Consensus         8 l~l~~k~vlVvG~G~v-a~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~   83 (113)
T d1pjqa1           8 CQLRDRDCLIVGGGDV-AERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDD   83 (113)
T ss_dssp             ECCBTCEEEEECCSHH-HHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCH
T ss_pred             EEeCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCCCH
Confidence            4789999999999995 999999999999999987543 2111                 13466789999998765

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.65  E-value=3.7e-05  Score=59.52  Aligned_cols=53  Identities=23%  Similarity=0.245  Sum_probs=45.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-----------------------------CCCHHhhhccCcEEEEec
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-----------------------------TTDPESIVREADIVIAAA  218 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-----------------------------t~~l~~~~~~aDivisA~  218 (229)
                      |+++|||.|.+ |.++|..|.++|+.|++..+.                             +.++.+.++.||+||.++
T Consensus         2 k~iaIiGaG~~-G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGLGNG-GHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECccHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            89999999996 999999999999999998763                             125678899999999998


Q ss_pred             CCC
Q 027064          219 GQA  221 (229)
Q Consensus       219 g~p  221 (229)
                      ..+
T Consensus        81 ~~~   83 (184)
T d1bg6a2          81 PAI   83 (184)
T ss_dssp             CGG
T ss_pred             chh
Confidence            644

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.60  E-value=6.8e-05  Score=59.85  Aligned_cols=55  Identities=27%  Similarity=0.347  Sum_probs=48.9

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------CCHHhhhccCcEEEEecC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------~~l~~~~~~aDivisA~g  219 (229)
                      .+.||++.|||.|.+ |+.++.+|..-|+.|+.+++..        .++.+.+++||+|+.+++
T Consensus        39 ~l~gk~vgIiG~G~I-G~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~p  101 (181)
T d1qp8a1          39 LIQGEKVAVLGLGEI-GTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALP  101 (181)
T ss_dssp             CCTTCEEEEESCSTH-HHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCC
T ss_pred             cccCceEEEeccccc-cccceeeeeccccccccccccccccceeeeechhhhhhccchhhcccc
Confidence            378999999999996 9999999999999999997743        267899999999999875

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=97.57  E-value=8.5e-05  Score=59.89  Aligned_cols=58  Identities=17%  Similarity=0.255  Sum_probs=50.6

Q ss_pred             hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecC
Q 027064          161 SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       161 ~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g  219 (229)
                      .+.++.||++.|||.|.+ |+-++.+|..-|++|..+++..             .++.+.+++||+|+..++
T Consensus        43 ~~~eL~gktvgIiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~~sD~i~~~~p  113 (193)
T d1mx3a1          43 GAARIRGETLGIIGLGRV-GQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCG  113 (193)
T ss_dssp             TCCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCC
T ss_pred             CceeeeCceEEEeccccc-cccceeeeeccccceeeccCcccccchhhhccccccchhhccccCCEEEEeec
Confidence            467899999999999996 9999999999999999987642             267889999999998876

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.57  E-value=1.9e-05  Score=62.88  Aligned_cols=64  Identities=23%  Similarity=0.390  Sum_probs=52.2

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecC----
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAG----  219 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g----  219 (229)
                      +.-.+|+|||+|.+ |.-.+......||.|++.+.+-.                     .+.+.+++||+||.++=    
T Consensus        30 v~pa~V~ViGaGva-G~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~  108 (168)
T d1pjca1          30 VKPGKVVILGGGVV-GTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR  108 (168)
T ss_dssp             BCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred             CCCcEEEEECCChH-HHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCc
Confidence            35689999999995 99999999999999999977421                     35688999999999965    


Q ss_pred             -CCCCCCCCCC
Q 027064          220 -QAMMVTMGIL  229 (229)
Q Consensus       220 -~p~~i~~~~v  229 (229)
                       .|++|+.+|+
T Consensus       109 ~aP~lIt~~mv  119 (168)
T d1pjca1         109 RAPILVPASLV  119 (168)
T ss_dssp             SCCCCBCHHHH
T ss_pred             ccCeeecHHHH
Confidence             4667776653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.51  E-value=5.1e-05  Score=58.03  Aligned_cols=35  Identities=29%  Similarity=0.482  Sum_probs=32.2

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      ..++||+|+|||.|. ||.--+..|++.||.||++.
T Consensus         9 ~~l~gkrvLViGgG~-va~~ka~~Ll~~GA~VtVva   43 (150)
T d1kyqa1           9 HQLKDKRILLIGGGE-VGLTRLYKLMPTGCKLTLVS   43 (150)
T ss_dssp             ECCTTCEEEEEEESH-HHHHHHHHHGGGTCEEEEEE
T ss_pred             eeeCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEe
Confidence            468999999999999 59999999999999999984

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.45  E-value=0.00015  Score=56.76  Aligned_cols=77  Identities=19%  Similarity=0.303  Sum_probs=57.3

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC-------------------CCHH
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT-------------------TDPE  205 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t-------------------~~l~  205 (229)
                      .++|.+..++..+++..-.-.|.+|+|+|+|. ||..+++++...|| +|+++.+..                   .+..
T Consensus         8 ~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~-iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~   86 (182)
T d1vj0a2           8 MAMCSGATAYHAFDEYPESFAGKTVVIQGAGP-LGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVE   86 (182)
T ss_dssp             HHTTHHHHHHHHHHTCSSCCBTCEEEEECCSH-HHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHH
T ss_pred             HhhcHHHHHHHHHHHHhCCCCCCEEEEECCCc-cchhheecccccccccccccccccccccccccccceEEEeccccchH
Confidence            45788888888888776445799999999987 69999999999999 788875421                   1222


Q ss_pred             hh---hc------cCcEEEEecCCCCC
Q 027064          206 SI---VR------EADIVIAAAGQAMM  223 (229)
Q Consensus       206 ~~---~~------~aDivisA~g~p~~  223 (229)
                      +.   +.      -+|+||.++|.|..
T Consensus        87 ~~~~~i~~~~~~~g~Dvvid~vG~~~~  113 (182)
T d1vj0a2          87 ERRKAIMDITHGRGADFILEATGDSRA  113 (182)
T ss_dssp             HHHHHHHHHTTTSCEEEEEECSSCTTH
T ss_pred             HHHHHHHHhhCCCCceEEeecCCchhH
Confidence            21   11      27999999998764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.00011  Score=58.25  Aligned_cols=59  Identities=22%  Similarity=0.280  Sum_probs=48.3

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCCCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAGQAMMV  224 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~p~~i  224 (229)
                      ..|+|+|+|+++.+|+.++..|+++|..|+...|...                     ++.+.++.+|+||+++|.....
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~   81 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL   81 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence            4699999999999999999999999999998865321                     2446789999999999865443

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=97.38  E-value=0.00016  Score=58.37  Aligned_cols=57  Identities=18%  Similarity=0.215  Sum_probs=49.8

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------CHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------DPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~l~~~~~~aDivisA~g  219 (229)
                      +.++.||++.|||.|.+ |+-++.+|..-|++|..+++...          ++.+.+++||+|+..++
T Consensus        40 ~~~l~~ktvgIiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~~~D~v~~~~p  106 (199)
T d1dxya1          40 GKELGQQTVGVMGTGHI-GQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVP  106 (199)
T ss_dssp             CCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCC
T ss_pred             cccccceeeeeeecccc-cccccccccccceeeeccCCccchhhhcchhHHHHHHHHHhcccceeeec
Confidence            46789999999999996 99999999999999999976431          67789999999998865

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.37  E-value=8.5e-05  Score=57.40  Aligned_cols=52  Identities=21%  Similarity=0.382  Sum_probs=45.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g~p  221 (229)
                      +|-|||-|.+ |.++|..|+++|.+|+++++...              +..+.++++|+||.+++.|
T Consensus         2 kIgiIGlG~M-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~   67 (161)
T d1vpda2           2 KVGFIGLGIM-GKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNS   67 (161)
T ss_dssp             EEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSH
T ss_pred             EEEEEehhHH-HHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCH
Confidence            6899999996 99999999999999999987532              4567899999999998754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.00026  Score=56.34  Aligned_cols=57  Identities=16%  Similarity=0.254  Sum_probs=49.8

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------CHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------DPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~l~~~~~~aDivisA~g  219 (229)
                      ..++.|+++.|+|.|.+ |+.++.+|..-|++|+..+....          ++.+.+++||||+.+.+
T Consensus        39 ~~~l~~~~vgiiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~~sDii~i~~p  105 (188)
T d1sc6a1          39 SFEARGKKLGIIGYGHI-GTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVP  105 (188)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCC
T ss_pred             cccccceEEEEeecccc-hhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHhhccceeeccc
Confidence            35689999999999996 99999999999999999876432          58899999999999876

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.30  E-value=0.00029  Score=56.02  Aligned_cols=57  Identities=25%  Similarity=0.269  Sum_probs=49.6

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g  219 (229)
                      +.++.||++.|+|.|.+ |+-++.+|..-|++|...++...            ++.+.+++||+|+.+++
T Consensus        39 ~~~l~~k~vgiiG~G~I-G~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~P  107 (184)
T d1ygya1          39 GTEIFGKTVGVVGLGRI-GQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLP  107 (184)
T ss_dssp             BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCC
T ss_pred             cccccceeeeeccccch-hHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCC
Confidence            45789999999999996 99999999999999998876432            57788999999999865

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.29  E-value=0.00016  Score=54.99  Aligned_cols=55  Identities=24%  Similarity=0.311  Sum_probs=46.6

Q ss_pred             CCCCeEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCC-CCHHhhhccCcEEEEecCC
Q 027064          165 IKGKRAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHT-TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       165 l~gk~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t-~~l~~~~~~aDivisA~g~  220 (229)
                      ..=|+|.||| .|.+ |.++|..|.+.|.+|+++++.. .........+|+++.++..
T Consensus         7 ~~~~kI~iIGg~G~m-G~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~   63 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKL-GGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPI   63 (152)
T ss_dssp             TTCCCEEEETTTSHH-HHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCG
T ss_pred             CCCCeEEEEcCCCHH-HHHHHHHHHHcCCCcEecccccccccchhhhhccccccccch
Confidence            3458999999 7885 9999999999999999998875 4556778999999998764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.24  E-value=0.00025  Score=54.08  Aligned_cols=52  Identities=17%  Similarity=0.174  Sum_probs=44.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g~p  221 (229)
                      ||.|||.|.+ |.+++..|+++|..|+++++...              +..+.++.+|+||+++.-+
T Consensus         2 kIgiIG~G~m-G~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~~~   67 (152)
T d1i36a2           2 RVGFIGFGEV-AQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPG   67 (152)
T ss_dssp             EEEEESCSHH-HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGG
T ss_pred             EEEEEcHHHH-HHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEecCc
Confidence            6899999996 99999999999999999876543              3457789999999998643

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=97.22  E-value=0.00046  Score=54.86  Aligned_cols=58  Identities=19%  Similarity=0.218  Sum_probs=50.0

Q ss_pred             hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecC
Q 027064          161 SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       161 ~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g  219 (229)
                      ...+++|+++.|||.|.+ |+.++.+|..-|+.|...++..              .++.+.+++||+|+.+.+
T Consensus        38 ~~~~l~~~~vgiiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~p  109 (188)
T d2naca1          38 HAYDLEAMHVGTVAAGRI-GLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCP  109 (188)
T ss_dssp             TCCCCTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSC
T ss_pred             cceeccccceeecccccc-chhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhccc
Confidence            356789999999999996 9999999999999999887632              257789999999998876

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.14  E-value=0.00024  Score=54.61  Aligned_cols=50  Identities=20%  Similarity=0.203  Sum_probs=41.9

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------CHHhhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~l~~~~~~aDivisA~g  219 (229)
                      ||.|||.|.+ |..+|..|.++|.+|+.+++...               +..+.+++||+||.|+.
T Consensus         2 kI~iIG~G~m-G~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp   66 (165)
T d2f1ka2           2 KIGVVGLGLI-GASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTP   66 (165)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSC
T ss_pred             EEEEEeecHH-HHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCc
Confidence            6899999995 99999999999999999977421               22367899999999985

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.13  E-value=0.00026  Score=56.85  Aligned_cols=34  Identities=21%  Similarity=0.182  Sum_probs=30.3

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ...+|+|||+|.+ |.-.+......||.|++.+.+
T Consensus        28 ~pa~VvViGaGva-G~~Aa~~A~~lGA~V~v~D~~   61 (183)
T d1l7da1          28 PPARVLVFGVGVA-GLQAIATAKRLGAVVMATDVR   61 (183)
T ss_dssp             CCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSC
T ss_pred             CCcEEEEEcCcHH-HHHHHHHHHHcCCEEEEEecc
Confidence            4479999999995 999999999999999999754

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=97.12  E-value=0.00049  Score=55.10  Aligned_cols=58  Identities=16%  Similarity=0.202  Sum_probs=49.7

Q ss_pred             hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecC
Q 027064          161 SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       161 ~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g  219 (229)
                      .+.+++||++.|||.|.+ |+.++.+|..-|+.|...+...              .++.+.+++||+|+.+.+
T Consensus        41 ~~~~l~g~tvgIiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll~~sD~v~l~~p  112 (191)
T d1gdha1          41 VGEKLDNKTLGIYGFGSI-GQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAP  112 (191)
T ss_dssp             CBCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCC
T ss_pred             ccceecccceEEeecccc-hHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHHhhCCeEEecCC
Confidence            356789999999999996 9999999999999999886532              257789999999998875

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.10  E-value=0.00039  Score=55.54  Aligned_cols=53  Identities=23%  Similarity=0.229  Sum_probs=44.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------------CCHHhhhccCcEE
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------------TDPESIVREADIV  214 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------------~~l~~~~~~aDiv  214 (229)
                      +|+|||.|- ||.|+|..|+++|..|+..+...                                  .+..+.+++||++
T Consensus         2 kI~ViGlG~-vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~i   80 (202)
T d1mv8a2           2 RISIFGLGY-VGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS   80 (202)
T ss_dssp             EEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred             EEEEECCCH-hHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCEE
Confidence            699999999 59999999999999999886421                                  1455678899999


Q ss_pred             EEecCCCC
Q 027064          215 IAAAGQAM  222 (229)
Q Consensus       215 isA~g~p~  222 (229)
                      +.+++.|-
T Consensus        81 ~i~VpTP~   88 (202)
T d1mv8a2          81 FICVGTPS   88 (202)
T ss_dssp             EECCCCCB
T ss_pred             EEecCccc
Confidence            99999884

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.07  E-value=0.00054  Score=52.77  Aligned_cols=52  Identities=25%  Similarity=0.379  Sum_probs=45.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~  220 (229)
                      ++|-+||-|.+ |.++|..|+++|.+|+++++..              .++.+.++.+|+|+.++..
T Consensus         2 ~kIg~IGlG~M-G~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~   67 (162)
T d3cuma2           2 KQIAFIGLGHM-GAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPA   67 (162)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSC
T ss_pred             CEEEEEEEHHH-HHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccc
Confidence            58999999996 9999999999999999998742              2567889999999998764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.07  E-value=0.00047  Score=56.57  Aligned_cols=60  Identities=17%  Similarity=0.289  Sum_probs=48.1

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC-----------------------HHhhhccCcEEEEecC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD-----------------------PESIVREADIVIAAAG  219 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~-----------------------l~~~~~~aDivisA~g  219 (229)
                      -+|+||.++|-|+|.=+|+.++..|+++||+|.++.+....                       ..+....-|++|+.+|
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG   82 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   82 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeec
Confidence            36899999999999988999999999999999999875431                       1122335699999998


Q ss_pred             CCC
Q 027064          220 QAM  222 (229)
Q Consensus       220 ~p~  222 (229)
                      ...
T Consensus        83 ~~~   85 (237)
T d1uzma1          83 LSA   85 (237)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.06  E-value=0.00062  Score=52.61  Aligned_cols=57  Identities=21%  Similarity=0.297  Sum_probs=44.4

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------------CHHhhhccCcEEEEec
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------------DPESIVREADIVIAAA  218 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------------~l~~~~~~aDivisA~  218 (229)
                      +-+||+|||+|. ||.++|.+|...+. .+.+++....                          +.++.++.||+||.+.
T Consensus         6 k~~KI~IIGaG~-VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvita   84 (154)
T d1pzga1           6 RRKKVAMIGSGM-IGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA   84 (154)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred             CCCcEEEECCCH-HHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEec
Confidence            458999999977 69999998887774 7777764321                          3446689999999999


Q ss_pred             CCCCC
Q 027064          219 GQAMM  223 (229)
Q Consensus       219 g~p~~  223 (229)
                      |.|..
T Consensus        85 g~~~~   89 (154)
T d1pzga1          85 GLTKV   89 (154)
T ss_dssp             SCSSC
T ss_pred             ccccC
Confidence            98754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=97.04  E-value=0.00054  Score=56.71  Aligned_cols=76  Identities=18%  Similarity=0.201  Sum_probs=55.2

Q ss_pred             cCCHHHHHHHHHH----h--CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---------------HHh
Q 027064          148 PCTPKGCLELLKR----S--GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---------------PES  206 (229)
Q Consensus       148 PcTa~av~~lL~~----~--~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---------------l~~  206 (229)
                      |.|++|+...++.    .  ..+|+||+|+|-|-|. ||..+|.+|.+.||+|++++-....               -.-
T Consensus        14 ~aTg~GV~~~~~~~~~~~~g~~~l~g~~v~IqG~Gn-VG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~~   92 (230)
T d1leha1          14 PVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGN-VAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAI   92 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGT
T ss_pred             cchHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccCCccc
Confidence            6788888886654    2  3579999999999999 5999999999999999888543211               112


Q ss_pred             hhccCcEEEEecCCCCCCC
Q 027064          207 IVREADIVIAAAGQAMMVT  225 (229)
Q Consensus       207 ~~~~aDivisA~g~p~~i~  225 (229)
                      +-..+||++=|.. .+.|+
T Consensus        93 ~~~~cDIl~PcA~-~~~I~  110 (230)
T d1leha1          93 YGVTCDIFAPCAL-GAVLN  110 (230)
T ss_dssp             TTCCCSEEEECSC-SCCBS
T ss_pred             ccccccEeccccc-ccccC
Confidence            2456898876654 34443

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.01  E-value=0.0004  Score=57.11  Aligned_cols=37  Identities=27%  Similarity=0.310  Sum_probs=34.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+||+++|.|+|.-+|+.++..|+++||+|.++.+.
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~   38 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT   38 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            6899999999999889999999999999999999764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.0004  Score=57.13  Aligned_cols=60  Identities=23%  Similarity=0.344  Sum_probs=47.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH--------------------------hhhccCcEEEEe
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE--------------------------SIVREADIVIAA  217 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~--------------------------~~~~~aDivisA  217 (229)
                      .|+||+++|.|+|.-+|+.+|..|+++|++|.++.+...++.                          +.+.+-|++|+.
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            589999999999999999999999999999999976432111                          224456899988


Q ss_pred             cCCCCC
Q 027064          218 AGQAMM  223 (229)
Q Consensus       218 ~g~p~~  223 (229)
                      .|....
T Consensus        84 Ag~~~~   89 (244)
T d1pr9a_          84 AAVALL   89 (244)
T ss_dssp             CCCCCC
T ss_pred             cccccc
Confidence            886543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00047  Score=56.17  Aligned_cols=41  Identities=22%  Similarity=0.343  Sum_probs=37.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP  204 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l  204 (229)
                      +|+||.++|-|+|.-+|+.++..|+++||+|.++.+....+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~   42 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG   42 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence            68999999999999999999999999999999998765433

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.96  E-value=0.00047  Score=56.19  Aligned_cols=59  Identities=31%  Similarity=0.366  Sum_probs=47.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------C-------HHhhhccCcEEEEecCCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------D-------PESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~-------l~~~~~~aDivisA~g~p~~  223 (229)
                      |+||.|+|-|+|.=+|+.++..|+++||+|.++.+...            |       +.+...+-|++|...|.+..
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~   79 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKA   79 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHHHHHHHHHhCCCcEEEecccccCC
Confidence            68999999999888899999999999999999876421            1       22445567999999987654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.90  E-value=0.00075  Score=50.91  Aligned_cols=52  Identities=13%  Similarity=0.119  Sum_probs=43.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~p  221 (229)
                      ||+|||.|.+ |..++..|++.|.+|+++.+...                     +..+....+|+||.++..+
T Consensus         2 kI~IiGaG~i-G~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~   74 (167)
T d1ks9a2           2 KITVLGCGAL-GQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW   74 (167)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG
T ss_pred             EEEEECcCHH-HHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeeccc
Confidence            7999999885 99999999999999999976432                     2235578899999998764

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.0014  Score=50.29  Aligned_cols=76  Identities=17%  Similarity=0.194  Sum_probs=52.6

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH--------------------Hh
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP--------------------ES  206 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l--------------------~~  206 (229)
                      ++|-...++..|++.++. .|.+|+|+|.|. ||..+++++...||.++++.+....+                    ..
T Consensus        12 l~Cag~Tay~al~~~~~~-~G~~VlI~GaG~-vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~   89 (168)
T d1uufa2          12 LLCAGITTYSPLRHWQAG-PGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAA   89 (168)
T ss_dssp             GGTHHHHHHHHHHHTTCC-TTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHT
T ss_pred             HHhHHHHHHHHHHHhCCC-CCCEEEEeccch-HHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEECchhhHHHH
Confidence            467333334455555543 699999999987 69999999999999877765533211                    12


Q ss_pred             hhccCcEEEEecCCCCCC
Q 027064          207 IVREADIVIAAAGQAMMV  224 (229)
Q Consensus       207 ~~~~aDivisA~g~p~~i  224 (229)
                      ..+..|++|.++|.+.-+
T Consensus        90 ~~~~~D~vid~~g~~~~~  107 (168)
T d1uufa2          90 HLKSFDFILNTVAAPHNL  107 (168)
T ss_dssp             TTTCEEEEEECCSSCCCH
T ss_pred             hcCCCceeeeeeecchhH
Confidence            345689999999987643

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.87  E-value=0.00088  Score=50.98  Aligned_cols=55  Identities=13%  Similarity=0.265  Sum_probs=40.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-------------------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      +||.|||+|. ||.++|.+|..++. .+...+....                         +-.+.+++||+||.++|.|
T Consensus         2 ~KI~IIGaG~-VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvitag~~   80 (142)
T d1uxja1           2 KKISIIGAGF-VGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAP   80 (142)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSCC
T ss_pred             CeEEEECCCH-HHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEEeeecc
Confidence            6899999977 69999999988775 7666654221                         1125589999999999987


Q ss_pred             CC
Q 027064          222 MM  223 (229)
Q Consensus       222 ~~  223 (229)
                      .-
T Consensus        81 ~~   82 (142)
T d1uxja1          81 RK   82 (142)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.87  E-value=0.0014  Score=51.04  Aligned_cols=77  Identities=22%  Similarity=0.164  Sum_probs=55.0

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-------------------CHH
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-------------------DPE  205 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-------------------~l~  205 (229)
                      ++||.-...+.-++..++. .|.+|+|+|.|. ||...++++...|+ .|+++.+...                   +..
T Consensus         8 ~l~~~~~ta~~a~~~a~~~-~g~~VlI~GaG~-vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~   85 (174)
T d1jqba2           8 MITDMMTTGFHGAELADIE-MGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIE   85 (174)
T ss_dssp             TTTTHHHHHHHHHHHTTCC-TTCCEEEECCSH-HHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHH
T ss_pred             HhhhHHHHHHHHHHHhCCC-CCCEEEEEcCCc-chhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccchhHH
Confidence            5677655556667776654 699999999987 59999999999998 6887755321                   122


Q ss_pred             hhh------ccCcEEEEecCCCCCC
Q 027064          206 SIV------READIVIAAAGQAMMV  224 (229)
Q Consensus       206 ~~~------~~aDivisA~g~p~~i  224 (229)
                      +.+      +-+|+||.++|.|..+
T Consensus        86 ~~v~~~t~g~G~D~vid~~g~~~~~  110 (174)
T d1jqba2          86 DQVMKLTNGKGVDRVIMAGGGSETL  110 (174)
T ss_dssp             HHHHHHTTTSCEEEEEECSSCTTHH
T ss_pred             HHHHHHhhccCcceEEEccCCHHHH
Confidence            212      1279999999988643

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.86  E-value=0.00034  Score=55.80  Aligned_cols=53  Identities=26%  Similarity=0.390  Sum_probs=44.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC----------------------------CCCHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH----------------------------TTDPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~----------------------------t~~l~~~~~~aDivisA~g  219 (229)
                      ++|+|||+|.. |..+|..|.+.|.+|++..+.                            |.++.+.++.||+||.|++
T Consensus         8 ~KI~ViGaG~w-GtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiavP   86 (189)
T d1n1ea2           8 NKAVVFGSGAF-GTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIP   86 (189)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECSC
T ss_pred             ceEEEECCCHH-HHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEEcCc
Confidence            68999999996 999999999999999986531                            1156788999999999987


Q ss_pred             CC
Q 027064          220 QA  221 (229)
Q Consensus       220 ~p  221 (229)
                      ..
T Consensus        87 s~   88 (189)
T d1n1ea2          87 TQ   88 (189)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.86  E-value=0.0013  Score=50.66  Aligned_cols=57  Identities=21%  Similarity=0.299  Sum_probs=43.8

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-------------------------CHHhhhccCcEEEEecCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-------------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-------------------------~l~~~~~~aDivisA~g~  220 (229)
                      ..||+|||+|. ||..+|.+|..++. .+.+++....                         +..+.++.||+||.+.|.
T Consensus         3 ~~KI~IIGaG~-VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~   81 (150)
T d1t2da1           3 KAKIVLVGSGM-IGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF   81 (150)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred             CCeEEEECCCH-HHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEeccc
Confidence            36899999877 69999999988886 5666654321                         233679999999999997


Q ss_pred             CCCC
Q 027064          221 AMMV  224 (229)
Q Consensus       221 p~~i  224 (229)
                      |..-
T Consensus        82 ~~~~   85 (150)
T d1t2da1          82 TKAP   85 (150)
T ss_dssp             SSCT
T ss_pred             ccCC
Confidence            7653

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.85  E-value=0.00049  Score=56.87  Aligned_cols=40  Identities=20%  Similarity=0.350  Sum_probs=36.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      .+|+||.|+|-|+|.=+|+.+|..|+++||+|.++.+...
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~   44 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAA   44 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCT
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            4689999999999998999999999999999999987654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.00051  Score=56.52  Aligned_cols=60  Identities=17%  Similarity=0.276  Sum_probs=47.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH-------------------------hhhccCcEEEEec
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE-------------------------SIVREADIVIAAA  218 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~-------------------------~~~~~aDivisA~  218 (229)
                      .|+||.|+|.|+|.-+|+.+|..|+++|++|.+++++...++                         +....-|++|...
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~a   82 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA   82 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecc
Confidence            389999999999999999999999999999999987532111                         2344568888888


Q ss_pred             CCCCC
Q 027064          219 GQAMM  223 (229)
Q Consensus       219 g~p~~  223 (229)
                      |.++.
T Consensus        83 g~~~~   87 (245)
T d2ag5a1          83 GFVHH   87 (245)
T ss_dssp             CCCCC
T ss_pred             cccCC
Confidence            86654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.00045  Score=53.38  Aligned_cols=53  Identities=11%  Similarity=-0.058  Sum_probs=42.9

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +||.+..++..|.+..---.|.+|+|.|.+..||..+.++....||+|+.+.+
T Consensus         9 ~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~   61 (179)
T d1qora2           9 SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG   61 (179)
T ss_dssp             HHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeeccc
Confidence            47777777777766543236999999999998999999999999999888744

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.80  E-value=0.0015  Score=49.49  Aligned_cols=54  Identities=22%  Similarity=0.324  Sum_probs=42.8

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-------------------------CHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      ||+|||+|. ||.+++..|..++.  .+.+++....                         +..+.+++||+||.+.|.|
T Consensus         2 KI~IIGaG~-VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvitag~~   80 (142)
T d1guza1           2 KITVIGAGN-VGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP   80 (142)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred             EEEEECcCH-HHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEEEEecC
Confidence            799999977 69999999998874  6887765432                         2236689999999999987


Q ss_pred             CC
Q 027064          222 MM  223 (229)
Q Consensus       222 ~~  223 (229)
                      .-
T Consensus        81 ~~   82 (142)
T d1guza1          81 RK   82 (142)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.80  E-value=0.00038  Score=57.83  Aligned_cols=38  Identities=26%  Similarity=0.301  Sum_probs=35.0

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+|+||+|+|.|++.-+|+.+|..|+++|++|.++.+.
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~   39 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN   39 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            47899999999999989999999999999999998764

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.79  E-value=0.0018  Score=49.73  Aligned_cols=52  Identities=23%  Similarity=0.300  Sum_probs=40.3

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|...-++..|++.++ -.|.+|+|+|.|. ||..+++++...||.|+++.+.
T Consensus         9 l~cag~Ta~~al~~~~~-~~g~~vlI~GaG~-vG~~a~q~ak~~G~~vi~~~~~   60 (168)
T d1piwa2           9 LLCGGLTVYSPLVRNGC-GPGKKVGIVGLGG-IGSMGTLISKAMGAETYVISRS   60 (168)
T ss_dssp             GGTHHHHHHHHHHHTTC-STTCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESS
T ss_pred             HHHHHHHHHHHHHHhCc-CCCCEEEEECCCC-cchhHHHHhhhccccccccccc
Confidence            46754445566666665 3799999999987 6999999999999998887654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.77  E-value=0.00079  Score=51.60  Aligned_cols=57  Identities=25%  Similarity=0.432  Sum_probs=44.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEecC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~g  219 (229)
                      .++||.|||+|. ||..+|..|..++-  .+.+++....                        +-.+.++.||+||.++|
T Consensus         5 ~~~KI~IiGaG~-vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvitag   83 (148)
T d1ldna1           5 GGARVVVIGAGF-VGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAG   83 (148)
T ss_dssp             TSCEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCS
T ss_pred             CCCeEEEECcCH-HHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEEecc
Confidence            579999999977 69999999998765  5777754211                        22366999999999999


Q ss_pred             CCCC
Q 027064          220 QAMM  223 (229)
Q Consensus       220 ~p~~  223 (229)
                      .|.-
T Consensus        84 ~~~~   87 (148)
T d1ldna1          84 ANQK   87 (148)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8754

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.77  E-value=0.0012  Score=54.61  Aligned_cols=37  Identities=19%  Similarity=0.253  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+||.|+|-|.|.=+|+.+|..|+++||+|+++.++
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~   38 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR   38 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            6899999999999888999999999999998887443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.76  E-value=0.00088  Score=55.50  Aligned_cols=38  Identities=21%  Similarity=0.344  Sum_probs=34.7

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+|+||.|+|-|+|.-+|+.++..|+++||+|.++.++
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~   51 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN   51 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            46999999999999889999999999999999998654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.73  E-value=0.00052  Score=50.67  Aligned_cols=52  Identities=23%  Similarity=0.238  Sum_probs=40.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------C-HH-hhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------D-PE-SIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------~-l~-~~~~~aDivisA~g~  220 (229)
                      |+++|+|.|.+ |+.++..|.++|..|+++.....                    + +. .-+.+||.+|.+++.
T Consensus         1 k~~iIiG~G~~-G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~   74 (134)
T d2hmva1           1 KQFAVIGLGRF-GGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA   74 (134)
T ss_dssp             CCEEEECCSHH-HHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCS
T ss_pred             CEEEEECCCHH-HHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCc
Confidence            78999999995 99999999999999998865321                    1 11 227889999988874

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.71  E-value=0.00076  Score=51.74  Aligned_cols=56  Identities=23%  Similarity=0.366  Sum_probs=42.2

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEecC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~g  219 (229)
                      +.+||+|||+|. ||.++|..|..+|.  .+.+++....                        +. +.++.|||||.++|
T Consensus         4 ~~~KI~IIGaG~-VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-~~~~~adivvitag   81 (146)
T d1ez4a1           4 NHQKVVLVGDGA-VGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-SDCKDADLVVITAG   81 (146)
T ss_dssp             TBCEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-GGGTTCSEEEECCC
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-HHhccccEEEEecc
Confidence            357999999987 69999999998873  6888875321                        22 45899999999999


Q ss_pred             CCCC
Q 027064          220 QAMM  223 (229)
Q Consensus       220 ~p~~  223 (229)
                      .|.-
T Consensus        82 ~~~~   85 (146)
T d1ez4a1          82 APQK   85 (146)
T ss_dssp             C---
T ss_pred             cccC
Confidence            8764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.71  E-value=0.0011  Score=54.88  Aligned_cols=37  Identities=22%  Similarity=0.452  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.|+|-|+|.-+|+.+|..|+++||+|.++++.
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~   38 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN   38 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4789999999999988999999999999999999774

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.69  E-value=0.00051  Score=56.98  Aligned_cols=38  Identities=24%  Similarity=0.253  Sum_probs=35.1

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+|+||.++|-|+|.=+|+.+|..|+++||+|.++.+.
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~   41 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN   41 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            47899999999999888999999999999999999764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.0015  Score=52.51  Aligned_cols=64  Identities=19%  Similarity=0.255  Sum_probs=49.5

Q ss_pred             HHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC---------------------CHHhhhccCc
Q 027064          156 ELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT---------------------DPESIVREAD  212 (229)
Q Consensus       156 ~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~---------------------~l~~~~~~aD  212 (229)
                      ++=|.+  ..++|+|+|.|+++.+|+.+...|+++|.  +|++..++..                     ++.+.++.+|
T Consensus         5 ~~~~~~--~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d   82 (232)
T d2bkaa1           5 KLREDF--RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHD   82 (232)
T ss_dssp             HHHHHH--HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCS
T ss_pred             HHHHHh--CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccc
Confidence            344444  35789999999999999999999999885  7888876431                     2345678899


Q ss_pred             EEEEecCCC
Q 027064          213 IVIAAAGQA  221 (229)
Q Consensus       213 ivisA~g~p  221 (229)
                      ++|.++|..
T Consensus        83 ~vi~~~~~~   91 (232)
T d2bkaa1          83 VGFCCLGTT   91 (232)
T ss_dssp             EEEECCCCC
T ss_pred             ccccccccc
Confidence            999998754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0012  Score=52.64  Aligned_cols=31  Identities=23%  Similarity=0.366  Sum_probs=29.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      |+|.|||+|.+ |..+|.++++.|++|++++.
T Consensus         5 kkvaViGaG~m-G~~iA~~~a~~G~~V~l~D~   35 (192)
T d1f0ya2           5 KHVTVIGGGLM-GAGIAQVAAATGHTVVLVDQ   35 (192)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECS
T ss_pred             EEEEEECcCHH-HHHHHHHHHhCCCcEEEEEC
Confidence            79999999996 99999999999999999965

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=96.67  E-value=0.0023  Score=52.58  Aligned_cols=38  Identities=18%  Similarity=0.314  Sum_probs=34.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      -|+||.++|-|+|.-+|+.+|..|+++|++|.+|.+..
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~   39 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP   39 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            37999999999998899999999999999999998754

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.67  E-value=0.0011  Score=51.36  Aligned_cols=52  Identities=17%  Similarity=0.183  Sum_probs=40.8

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +||.+.-++..|++.+. -.|++|+|.|+++.||..+.+++...||+|+.+.+
T Consensus         9 l~~~~~TA~~al~~~~~-~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~   60 (171)
T d1iz0a2           9 FPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS   60 (171)
T ss_dssp             SHHHHHHHHHHHHHTTC-CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES
T ss_pred             HHHHHHHHHHHHHHhCC-CCCCEEEEEeccccchhhhhhhhcccccccccccc
Confidence            46665656666776543 47999999998677899999999999999887654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=96.66  E-value=0.0011  Score=48.02  Aligned_cols=36  Identities=17%  Similarity=0.218  Sum_probs=32.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ..||+++|||.|.+ |--+|..|.+.|..|+++++..
T Consensus        20 ~~~~~vvVvGgG~i-g~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGGSKT-AVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECCCHH-HHHHHHHHHhcchhheEeeccc
Confidence            35899999999995 9999999999999999998753

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.66  E-value=0.00051  Score=57.32  Aligned_cols=38  Identities=24%  Similarity=0.325  Sum_probs=35.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +|+||.|+|-|++.-+|+.+|..|+++|++|+++.+..
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~   59 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM   59 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH
Confidence            68999999999988899999999999999999998753

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.65  E-value=0.00054  Score=56.52  Aligned_cols=37  Identities=22%  Similarity=0.315  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|.||.|+|-|+|.=+|+.+|..|+++||+|+++.++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~   39 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS   39 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence            6899999999999989999999999999999987554

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.63  E-value=0.0018  Score=49.34  Aligned_cols=53  Identities=13%  Similarity=0.155  Sum_probs=43.1

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+||+...++.-+++.+. -.|.+|+|+|.|. ||..+++++...|++|+.+.+.
T Consensus         8 ~l~ca~~Ta~~al~~~~~-~~g~~VlV~GaG~-vG~~~~~~ak~~G~~Vi~~~~~   60 (166)
T d1llua2           8 PILCAGVTVYKGLKQTNA-RPGQWVAISGIGG-LGHVAVQYARAMGLHVAAIDID   60 (166)
T ss_dssp             GGGTHHHHHHHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESC
T ss_pred             HHHHHHHHHHHHHHHhCC-CCCCEEEEeeccc-cHHHHHHHHHHcCCccceecch
Confidence            468977667777777664 3699999999987 6999999999999998888654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.62  E-value=0.00061  Score=56.52  Aligned_cols=37  Identities=19%  Similarity=0.309  Sum_probs=34.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+||.++|-|+|.-+|+.+|..|+++||+|.+|.+.
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~   38 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL   38 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            6899999999999989999999999999999999764

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.62  E-value=0.0018  Score=49.43  Aligned_cols=54  Identities=26%  Similarity=0.412  Sum_probs=41.3

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC-----------------------CCHHhhhccCcEEEEecCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT-----------------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t-----------------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      ||+|||+++.||..+|.+|..++.  .+.+++...                       .+..+.++.|||||.+.|.|.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCC
Confidence            799999855579999999998876  455554311                       134577899999999999875

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.62  E-value=0.0017  Score=53.26  Aligned_cols=38  Identities=21%  Similarity=0.366  Sum_probs=32.7

Q ss_pred             CCCCCeEEEEccch--hhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSN--IVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~--~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      -|+||+++|.|++.  =+|+.+|..|+++|++|+++.+..
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~   41 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE   41 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            37899999999753  259999999999999999998754

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.60  E-value=0.00095  Score=51.21  Aligned_cols=54  Identities=20%  Similarity=0.375  Sum_probs=41.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      |||+|||+|. ||..+|..|..+|.  .+.+++....                        +..+.++.||+||.+.|.|
T Consensus         2 kKI~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVitaG~~   80 (146)
T d1hyha1           2 RKIGIIGLGN-VGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNI   80 (146)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSCG
T ss_pred             CeEEEECcCH-HHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEEecccc
Confidence            8999999987 69999998888774  5776654211                        1225689999999999976


Q ss_pred             C
Q 027064          222 M  222 (229)
Q Consensus       222 ~  222 (229)
                      .
T Consensus        81 ~   81 (146)
T d1hyha1          81 K   81 (146)
T ss_dssp             G
T ss_pred             c
Confidence            4

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.58  E-value=0.001  Score=54.85  Aligned_cols=37  Identities=22%  Similarity=0.389  Sum_probs=34.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.++|-|+|.-+|+.+|..|+++||+|.++.+.
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~   38 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADIN   38 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            3789999999999989999999999999999999774

>d1vi2a2 c.58.1.5 (A:5-106) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.58  E-value=0.0003  Score=50.97  Aligned_cols=69  Identities=14%  Similarity=0.179  Sum_probs=52.6

Q ss_pred             HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchh
Q 027064           59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIG  135 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g  135 (229)
                      .-..++++.|++..|..++  ++.++|.+.++.+.+. ++.|+.|++|++     +.+++.++- ..++..+.++|+-
T Consensus        21 ihn~~f~~~gi~~~Y~~~~--v~~~~l~~~~~~l~~~-~~~G~nVT~P~K-----~~~~~~~d~~~~~a~~igAvNti   90 (102)
T d1vi2a2          21 MQNKALEKAGLPFTYMAFE--VDNDSFPGAIEGLKAL-KMRGTGVSMPNK-----QLACEYVDELTPAAKLVGAINTI   90 (102)
T ss_dssp             HHHHHHHHTTCSEEEEEEE--CCTTTHHHHHHHHHHT-TCCEEEECTTST-----TGGGGGCSEECHHHHHHTCCSEE
T ss_pred             HHHHHHHHcCCCcEEeeEe--eCchHHHHHHHHhhhh-ccchhhhhhHHH-----HHHHHhcccCCHHHHhhCcEEEE
Confidence            3467899999999998876  5556677777777553 699999999999     467777764 5566777888873

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.57  E-value=0.0014  Score=53.65  Aligned_cols=37  Identities=19%  Similarity=0.276  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.++|-|+|.=+|+.+|..|+++|++|.++.+.
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~   38 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE   38 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            3789999999998888999999999999999999774

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.57  E-value=0.0014  Score=50.03  Aligned_cols=52  Identities=13%  Similarity=0.227  Sum_probs=43.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------CCHHhhhccCcEEEEecCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------TDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------~~l~~~~~~aDivisA~g~p~  222 (229)
                      ++.+||.|.+ |.+++.-|.+.+..|+++++..               .+..+.++.||+||-|+ +|.
T Consensus         2 kIg~IG~G~m-G~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~~dvIilav-kp~   68 (152)
T d2ahra2           2 KIGIIGVGKM-ASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGI-KPQ   68 (152)
T ss_dssp             EEEEECCSHH-HHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECS-CGG
T ss_pred             EEEEEeccHH-HHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeechhhhhhhccceeeeec-chH
Confidence            6899999996 9999999999999999997742               25557789999999998 354

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=96.57  E-value=0.0012  Score=51.67  Aligned_cols=33  Identities=27%  Similarity=0.374  Sum_probs=30.9

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ||+|+|||+|.. |...|..|.++|..|+++.+.
T Consensus         1 ~KkV~IIGaG~a-GL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVS-GLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHH-HHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECcCHH-HHHHHHHHHhCCCCEEEEeCC
Confidence            799999999998 999999999999999999764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.56  E-value=0.00068  Score=55.96  Aligned_cols=38  Identities=24%  Similarity=0.413  Sum_probs=35.0

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|+||.++|-|+|.-+|+.+|..|+++||+|.++.+.
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~   38 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN   38 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            37899999999999989999999999999999999764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.53  E-value=0.0016  Score=53.61  Aligned_cols=37  Identities=22%  Similarity=0.229  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.++|-|+|.-+|+.+|..|+++|++|.++.+.
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~   39 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL   39 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            5899999999999989999999999999999999764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0014  Score=48.31  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=31.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      -|+++|||.|-+ |--+|..|.+.|..||++++..
T Consensus        22 pk~vvIvGgG~i-G~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYI-AVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCCcc-HHHHHHHHhcCCcEEEEEeecc
Confidence            389999999995 9999999999999999998864

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.52  E-value=0.0021  Score=49.65  Aligned_cols=78  Identities=19%  Similarity=0.204  Sum_probs=51.2

Q ss_pred             CcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCC-------------------CCCH
Q 027064          145 LFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSH-------------------TTDP  204 (229)
Q Consensus       145 ~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~-------------------t~~l  204 (229)
                      ..++|.-...+.-+.+..-.-.|.+|+|+|.|. +|...++++...|+. |+++.+.                   ..+.
T Consensus         7 apl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~-iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~   85 (174)
T d1f8fa2           7 GPLGCGIQTGAGACINALKVTPASSFVTWGAGA-VGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDP   85 (174)
T ss_dssp             GGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSH-HHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCH
T ss_pred             HHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCH-HHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCH
Confidence            345786555555544433334799999999987 599999999998985 4555331                   1233


Q ss_pred             Hhhhcc-----CcEEEEecCCCCC
Q 027064          205 ESIVRE-----ADIVIAAAGQAMM  223 (229)
Q Consensus       205 ~~~~~~-----aDivisA~g~p~~  223 (229)
                      .+.+++     .|+||.++|.+..
T Consensus        86 ~~~i~~~t~gg~D~vid~~G~~~~  109 (174)
T d1f8fa2          86 VAAIKEITDGGVNFALESTGSPEI  109 (174)
T ss_dssp             HHHHHHHTTSCEEEEEECSCCHHH
T ss_pred             HHHHHHHcCCCCcEEEEcCCcHHH
Confidence            333332     6999999987643

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.52  E-value=0.0023  Score=47.13  Aligned_cols=35  Identities=26%  Similarity=0.400  Sum_probs=31.9

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      .+|+++|||.|-+ |--+|..|.++|..||++++..
T Consensus        29 ~~~~vvIIGgG~i-G~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          29 PQSRLLIVGGGVI-GLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECcchh-HHHHHHHhhcccceEEEEeecc
Confidence            5799999999995 9999999999999999997754

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.50  E-value=0.0006  Score=56.57  Aligned_cols=38  Identities=16%  Similarity=0.212  Sum_probs=35.3

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|+||.++|-|+|.-+|+.+|..|+++||+|.++.+.
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~   41 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN   41 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            47899999999999999999999999999999999764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.50  E-value=0.00077  Score=55.23  Aligned_cols=37  Identities=22%  Similarity=0.348  Sum_probs=34.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.++|.|+|.-+|+.+|..|.++|++|+++.+.
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~   38 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE   38 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4799999999999999999999999999999998664

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.49  E-value=0.0024  Score=48.53  Aligned_cols=54  Identities=15%  Similarity=0.352  Sum_probs=39.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-----------------------CHHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-----------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-----------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      +||+|||+|. ||..+|..|..++.  .+.+++....                       ...+.++.|||||.+.|.|.
T Consensus         2 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~~   80 (142)
T d1y6ja1           2 SKVAIIGAGF-VGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR   80 (142)
T ss_dssp             CCEEEECCSH-HHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred             CeEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEeccccc
Confidence            4899999977 69999999998876  5777764321                       12356899999999999774

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.47  E-value=0.001  Score=51.42  Aligned_cols=53  Identities=13%  Similarity=0.108  Sum_probs=39.6

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +||.+..++..|.+..---.|.+|+|.|++..||..+++++...|++|.++-+
T Consensus         6 l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~   58 (183)
T d1pqwa_           6 FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG   58 (183)
T ss_dssp             HHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeec
Confidence            36666666666655543346999999998666899999999999998776633

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.00062  Score=56.46  Aligned_cols=36  Identities=28%  Similarity=0.450  Sum_probs=34.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      |+||+|+|.|+|.=+|+.+|..|+++|++|.++.+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~   47 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS   47 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            799999999999989999999999999999999774

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.44  E-value=0.0017  Score=53.85  Aligned_cols=37  Identities=22%  Similarity=0.349  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+||.++|.|+|.-+|+.+|..|+++|++|.++.+.
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~   40 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS   40 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            6899999999999889999999999999999998764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.44  E-value=0.002  Score=53.02  Aligned_cols=36  Identities=31%  Similarity=0.408  Sum_probs=33.6

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      |+||.++|-|+|.-+|+.+|..|+++||+|.++.++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~   37 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG   37 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            689999999999989999999999999999999764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.44  E-value=0.0026  Score=51.11  Aligned_cols=54  Identities=15%  Similarity=0.264  Sum_probs=44.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH------Hhhhc--cCcEEEEecCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP------ESIVR--EADIVIAAAGQAM  222 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l------~~~~~--~aDivisA~g~p~  222 (229)
                      ||+|.|+++.+|+.++..|.++|.+|+.+++...|+      .+.++  +.|+||.+.+..+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~~   64 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTA   64 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeeccccc
Confidence            699999999999999999999999999998765432      34454  4599999887654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.43  E-value=0.0017  Score=50.74  Aligned_cols=52  Identities=17%  Similarity=0.306  Sum_probs=43.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-----------------------------CCCHHhhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-----------------------------TTDPESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-----------------------------t~~l~~~~~~aDivisA~g  219 (229)
                      +|+|||+|.. |-.+|..|.+.|..|++..+.                             |.++.+.++.||+||.|++
T Consensus         2 kI~ViGaG~~-GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avp   80 (180)
T d1txga2           2 IVSILGAGAM-GSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS   80 (180)
T ss_dssp             EEEEESCCHH-HHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred             EEEEECCCHH-HHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcccc
Confidence            7999999996 999999999999999987441                             1145678999999999987


Q ss_pred             CC
Q 027064          220 QA  221 (229)
Q Consensus       220 ~p  221 (229)
                      ..
T Consensus        81 s~   82 (180)
T d1txga2          81 TD   82 (180)
T ss_dssp             GG
T ss_pred             hh
Confidence            43

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.0029  Score=48.63  Aligned_cols=54  Identities=17%  Similarity=0.085  Sum_probs=40.8

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      -+||....++..|.+..---.|.+|+|.|+++.||..+.+++...|++|+.+.+
T Consensus         8 ~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~   61 (174)
T d1yb5a2           8 AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG   61 (174)
T ss_dssp             TTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             HhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccc
Confidence            357766666666655432337999999998666899999999999999877644

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.42  E-value=0.0026  Score=48.63  Aligned_cols=55  Identities=25%  Similarity=0.428  Sum_probs=41.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC-----------------------------CCHHhhhccCcEEEEe
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT-----------------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t-----------------------------~~l~~~~~~aDivisA  217 (229)
                      ||+|||+++.||..+|.+|..++.  .+.+.+...                             .+..+.++.|||||.+
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVit   81 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIIT   81 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEEe
Confidence            699999855579999999998884  676664321                             0123567899999999


Q ss_pred             cCCCCC
Q 027064          218 AGQAMM  223 (229)
Q Consensus       218 ~g~p~~  223 (229)
                      .|.|..
T Consensus        82 AG~~~~   87 (145)
T d1hyea1          82 SGVPRK   87 (145)
T ss_dssp             CSCCCC
T ss_pred             cccccC
Confidence            998753

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.41  E-value=0.00076  Score=55.39  Aligned_cols=37  Identities=27%  Similarity=0.297  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+||.++|-|+|.-+|+.+|..|+++|++|.++.+.
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~   37 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATS   37 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            5899999999999989999999999999999998764

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.41  E-value=0.003  Score=48.14  Aligned_cols=43  Identities=26%  Similarity=0.333  Sum_probs=35.2

Q ss_pred             HHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          155 LELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       155 ~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++.+++.++ -.|.+|+|+|.|. ||...++++...|++|+++.+
T Consensus        16 ~~a~~~~~~-~~g~~vlV~G~G~-vG~~~~~~ak~~Ga~vi~v~~   58 (170)
T d1e3ja2          16 VHACRRAGV-QLGTTVLVIGAGP-IGLVSVLAAKAYGAFVVCTAR   58 (170)
T ss_dssp             HHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEES
T ss_pred             HHHHHHhCC-CCCCEEEEEcccc-cchhhHhhHhhhcccccccch
Confidence            455666664 3689999999887 699999999999999998855

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.39  E-value=0.0025  Score=48.30  Aligned_cols=52  Identities=17%  Similarity=0.197  Sum_probs=43.8

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+||+...++..|+..++. .|.+|+|.|.|. +|..++.++...|+.|+++.+
T Consensus         8 ~l~~~~~Ta~~al~~~~~~-~g~~vlv~G~G~-iG~~a~~~a~~~g~~v~~~~~   59 (168)
T d1rjwa2           8 PIFCAGVTTYKALKVTGAK-PGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDI   59 (168)
T ss_dssp             GGGTHHHHHHHHHHHHTCC-TTCEEEEECCST-THHHHHHHHHHTTCEEEEECS
T ss_pred             HHHHHHHHHHHHHHHhCCC-CCCEEEEeeccc-chhhhhHHHhcCCCeEeccCC
Confidence            4588887778888888865 699999999988 599999999999999888754

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.38  E-value=0.0028  Score=49.31  Aligned_cols=58  Identities=21%  Similarity=0.369  Sum_probs=44.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEec
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAA  218 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~  218 (229)
                      +..+||.|||+|. ||..+|..|..+|.  .+.+++....                        +-.+.++.|||||.++
T Consensus        18 ~~~~KV~IIGaG~-VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVitA   96 (160)
T d1i0za1          18 VPNNKITVVGVGQ-VGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTA   96 (160)
T ss_dssp             CCSSEEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEECC
T ss_pred             CCCCeEEEECCCH-HHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEEec
Confidence            3568999999988 69999999998876  5777754211                        1235689999999999


Q ss_pred             CCCCC
Q 027064          219 GQAMM  223 (229)
Q Consensus       219 g~p~~  223 (229)
                      |.|.-
T Consensus        97 g~~~~  101 (160)
T d1i0za1          97 GVRQQ  101 (160)
T ss_dssp             SCCCC
T ss_pred             CCccc
Confidence            98864

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.37  E-value=0.0039  Score=51.00  Aligned_cols=38  Identities=24%  Similarity=0.305  Sum_probs=34.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      .|+||.++|-|+|.-+|+.+|..|+++||+|.++.+..
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~   39 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP   39 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            47999999999999899999999999999999997753

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.36  E-value=0.0025  Score=48.64  Aligned_cols=55  Identities=22%  Similarity=0.379  Sum_probs=41.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      .||.|||+|. ||..+|..|..++.  .+.+++....                        +-.+.++.||+||.+.|.|
T Consensus         2 ~Ki~IIGaG~-VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVitaG~~   80 (143)
T d1llda1           2 TKLAVIGAGA-VGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR   80 (143)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred             CEEEEECCCH-HHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEEecccc
Confidence            3799999977 69999999988876  4666654211                        1225589999999999987


Q ss_pred             CC
Q 027064          222 MM  223 (229)
Q Consensus       222 ~~  223 (229)
                      .-
T Consensus        81 ~~   82 (143)
T d1llda1          81 QK   82 (143)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.32  E-value=0.0017  Score=53.00  Aligned_cols=38  Identities=32%  Similarity=0.515  Sum_probs=32.7

Q ss_pred             CCCCCCeEEEEccch--hhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSN--IVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~--~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|+||.++|-|+|.  =+|+.+|..|+++||+|.++.+.
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~   43 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA   43 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence            579999999999863  25999999999999999887654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0011  Score=54.50  Aligned_cols=38  Identities=11%  Similarity=0.248  Sum_probs=35.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||.|+|-|+|.-+|+.+|..|+++|++|.++.+..
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~   41 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK   41 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            68999999999999999999999999999999997753

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.31  E-value=0.0016  Score=53.81  Aligned_cols=37  Identities=27%  Similarity=0.383  Sum_probs=32.2

Q ss_pred             CCCCCCeEEEEccch--hhhHHHHHHHhhCCCEEEEEcC
Q 027064          163 VTIKGKRAVVVGRSN--IVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~--~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+|+||+++|-|+|.  =+|+.+|..|+++||+|.++.+
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~   42 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTW   42 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            579999999999863  2499999999999999998854

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.30  E-value=0.0014  Score=51.70  Aligned_cols=32  Identities=16%  Similarity=0.224  Sum_probs=29.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      |+|.|||+|.+ |..+|.++++.|++|++.+..
T Consensus         5 ~~vaViGaG~m-G~~iA~~~a~~G~~V~l~D~~   36 (186)
T d1wdka3           5 KQAAVLGAGIM-GGGIAYQSASKGTPILMKDIN   36 (186)
T ss_dssp             SSEEEECCHHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEEECcCHH-HHHHHHHHHhCCCeEEEEECC
Confidence            78999999986 999999999999999999764

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.29  E-value=0.0029  Score=51.15  Aligned_cols=35  Identities=14%  Similarity=0.159  Sum_probs=32.2

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +||+|+|.|+|.-+|+.++..|+++|++|.+++..
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~   35 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV   35 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            59999999999989999999999999999988553

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.26  E-value=0.0023  Score=48.37  Aligned_cols=54  Identities=22%  Similarity=0.333  Sum_probs=40.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-----------------------CHHhhhccCcEEEEecCCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-----------------------DPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-----------------------~l~~~~~~aDivisA~g~p~~  223 (229)
                      |++|||+|. ||.+++..|..++.  .+.+.+....                       +..+.++.||+||.++|.|.-
T Consensus         2 KI~IIGaG~-VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~~~   80 (140)
T d1a5za1           2 KIGIVGLGR-VGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVPQK   80 (140)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCCCC
T ss_pred             EEEEECcCH-HHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEecccccC
Confidence            789999987 69999998887764  5666654211                       223569999999999998764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.24  E-value=0.0048  Score=47.03  Aligned_cols=53  Identities=17%  Similarity=0.194  Sum_probs=41.5

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .+||....+...+++.++ -.|.+|+|+|.++.+|..+++++...|+ +|+++.+
T Consensus         8 ~l~c~~~Ta~~al~~~~~-~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~   61 (170)
T d1jvba2           8 PLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV   61 (170)
T ss_dssp             GGGTHHHHHHHHHHHTTC-CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES
T ss_pred             HHHHHHHHHHHHHHHhCC-CCCCEEEEEeccccceeeeeeccccccccccccccc
Confidence            468877767777777664 3689999999766679999999998886 7887754

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.23  E-value=0.0013  Score=54.78  Aligned_cols=37  Identities=16%  Similarity=0.341  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.|+|-|+|.-+|+.+|..|+++||+|.+|.+.
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~   38 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKS   38 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            3789999999999889999999999999999999774

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.22  E-value=0.0034  Score=45.36  Aligned_cols=35  Identities=31%  Similarity=0.435  Sum_probs=31.4

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ..|+++|||.|.+ |--+|..|.+.|+.||+.++..
T Consensus        20 ~p~~vvIiGgG~~-G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVGGGYI-GLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCCHH-HHHHHHHHhhcccceEEEeeec
Confidence            4589999999995 9999999999999999998753

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.18  E-value=0.0046  Score=45.08  Aligned_cols=35  Identities=23%  Similarity=0.321  Sum_probs=31.7

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ..++++|||.|-+ |--+|..|.+.|+.||++.+..
T Consensus        21 ~p~~i~IiG~G~i-g~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVI-GLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECCChH-HHHHHHHHHHcCCceEEEEeec
Confidence            4599999999995 9999999999999999998754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0016  Score=53.63  Aligned_cols=38  Identities=24%  Similarity=0.327  Sum_probs=34.8

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -.|+||.++|-|+|.-+|+.+|..|+++||+|.++.+.
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~   39 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD   39 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            35899999999999889999999999999999999764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.16  E-value=0.0012  Score=54.55  Aligned_cols=38  Identities=21%  Similarity=0.423  Sum_probs=34.9

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..|+||.++|-|+|.-+|+.+|..|+++||+|.++.+.
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~   44 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN   44 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            35899999999999989999999999999999999764

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.14  E-value=0.0036  Score=48.64  Aligned_cols=58  Identities=22%  Similarity=0.416  Sum_probs=44.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEec
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAA  218 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~  218 (229)
                      ++-.+|.|||+|. ||..+|.+|..++.  .+.+++....                        +-.+.++.|||||.+.
T Consensus        17 ~~~~KI~IIGaG~-VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvita   95 (159)
T d2ldxa1          17 LSRCKITVVGVGD-VGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIITA   95 (159)
T ss_dssp             CCCCEEEEECCSH-HHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEECC
T ss_pred             CCCCeEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEEec
Confidence            4446899999988 69999999998876  5777764321                        1235689999999999


Q ss_pred             CCCCC
Q 027064          219 GQAMM  223 (229)
Q Consensus       219 g~p~~  223 (229)
                      |.|..
T Consensus        96 g~~~~  100 (159)
T d2ldxa1          96 GARMV  100 (159)
T ss_dssp             SCCCC
T ss_pred             ccccC
Confidence            98764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.14  E-value=0.0015  Score=54.02  Aligned_cols=37  Identities=22%  Similarity=0.351  Sum_probs=34.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.|+|.|+|.=+|+.+|..|+++|++|.++.+.
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~   39 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA   39 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            4899999999999989999999999999999999763

>d1nyta2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.13  E-value=0.0005  Score=49.67  Aligned_cols=68  Identities=10%  Similarity=0.132  Sum_probs=52.6

Q ss_pred             HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccch
Q 027064           59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNI  134 (229)
Q Consensus        59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~  134 (229)
                      .-..++++.|++..+..++  ++.+++.+.++.+.+ .++.|+.|++|++     +.+++.+|- ..++.-+.++|+
T Consensus        19 ihn~~~~~~gi~~~y~~~~--v~~~~~~~~~~~l~~-~~~~G~nVT~P~K-----~~~~~~~d~~~~~a~~igAvNt   87 (101)
T d1nyta2          19 IHQQFAQQLNIEHPYGRVL--APINDFINTLNAFFS-AGGKGANVTVPFK-----EEAFARADELTERAALAGAVNT   87 (101)
T ss_dssp             HHHHHHHHHTCCCCEEEEE--CCTTCHHHHHHHHHH-TTCCEEEECTTCH-----HHHHHHCSEECHHHHHHTCCSE
T ss_pred             HHHHHHHHcCCcchhhhhc--CChHhHHHHHHHhhh-ccchhheeehHHH-----HHHHHHhccCChHHHHhCcEEE
Confidence            3456899999999888765  455677777777754 4689999999998     678888876 566677788886

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=96.12  E-value=0.0044  Score=51.20  Aligned_cols=49  Identities=29%  Similarity=0.216  Sum_probs=40.6

Q ss_pred             cCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          148 PCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       148 PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      ..|.+|+...++    +.+.+++||+|+|=|.|. ||..+|.+|.+.||+|+.+
T Consensus         8 ~ATg~Gv~~~~~~~~~~~~~~l~g~~v~IqGfGn-VG~~~a~~L~~~Gakvv~v   60 (242)
T d1v9la1           8 YATGFGVAVATREMAKKLWGGIEGKTVAIQGMGN-VGRWTAYWLEKMGAKVIAV   60 (242)
T ss_dssp             GHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSH-HHHHHHHHHHTTTCEEEEE
T ss_pred             chhhHHHHHHHHHHHHHcCCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEe
Confidence            457777766555    556799999999999999 5999999999999987543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.10  E-value=0.0014  Score=53.99  Aligned_cols=39  Identities=21%  Similarity=0.203  Sum_probs=35.4

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -.+|+||.++|.|+|.=+|+.+|..|+++|++|.++.+.
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~   43 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT   43 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC
Confidence            457899999999999888999999999999999999764

>d1npya2 c.58.1.5 (A:1-102) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.07  E-value=0.0076  Score=43.21  Aligned_cols=83  Identities=11%  Similarity=0.256  Sum_probs=56.5

Q ss_pred             CeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhc
Q 027064           40 PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGE  119 (229)
Q Consensus        40 P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~  119 (229)
                      .++.+- ++.+|.|.+ =+.=..+++++|++.+|..++.+    ++.+.++.+.+ .++.|+.|++|++.     .+++.
T Consensus         6 t~~~~~-i~g~P~s~S-P~ihn~~~~~~gi~~~Y~~~~v~----~l~~~~~~~~~-~~~~G~nVT~P~K~-----~~~~~   73 (102)
T d1npya2           6 TQLCMS-LSGRPSNFG-TTFHNYLYDKLGLNFIYKAFTTQ----DIEHAIKGVRA-LGIRGCAVSMPFKE-----TCMPF   73 (102)
T ss_dssp             CEEEEE-ECSSCCSHH-HHHHHHHHHHHTCCEEEEEECCS----CHHHHHHHHHH-HTCCEEEECTTCTT-----TTGGG
T ss_pred             CEEEEE-EcCCcccCC-HHHHHHHHHHcCCCeEEeeEecc----cHHHHHHHHhc-cccceeEEehhHHH-----HHHHH
Confidence            344433 355677765 34677899999999999999743    34444555443 36899999999995     45555


Q ss_pred             CCc-cCcccccCccch
Q 027064          120 ISL-EKDVDGFHPLNI  134 (229)
Q Consensus       120 I~p-~KDVDg~~~~N~  134 (229)
                      ++. ...+.-+.++|+
T Consensus        74 ~d~~s~~a~~igAvNt   89 (102)
T d1npya2          74 LDEIHPSAQAIESVNT   89 (102)
T ss_dssp             CSEECHHHHTTTCCCE
T ss_pred             hhhCChhhhhcCcEEE
Confidence            554 445566778887

>d1p77a2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.06  E-value=0.00082  Score=48.42  Aligned_cols=68  Identities=10%  Similarity=-0.027  Sum_probs=52.0

Q ss_pred             HHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchh
Q 027064           60 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIG  135 (229)
Q Consensus        60 k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g  135 (229)
                      -..++++.|++..|..++  ++.++|.+.++.+.+ .+..|+.|++|++     +.+++.++. ...+.-+.++|+-
T Consensus        20 hn~~~~~~gi~~~y~~~~--v~~~~~~~~~~~l~~-~~~~G~nVT~P~K-----~~~~~~~d~~~~~a~~igAvNti   88 (101)
T d1p77a2          20 QNKLAAQTHQTMEYIAKL--GDLDAFEQQLLAFFE-EGAKGCNITSPFK-----ERAYQLADEYSQRAKLAEACNTL   88 (101)
T ss_dssp             HHHHHHHTTCCEEEEEEE--CCTTTHHHHHHHHHH-TTCCEEEECTTCH-----HHHHHHCSEECHHHHHHTCCSEE
T ss_pred             HHHHHHHcCCCccccccc--CCHHHHHHHHHHHHh-ccccceeeccHHH-----HHHHHHhccCCHHHHHcCeeEEE
Confidence            457899999999998876  455677777777754 4699999999998     677777765 4455667778863

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.06  E-value=0.0047  Score=52.21  Aligned_cols=36  Identities=19%  Similarity=0.286  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .|+||.++|-|+|.=+|+.+|..|+++||+|.++.+
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~   39 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDL   39 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence            578999999999999999999999999999999854

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.05  E-value=0.0061  Score=51.32  Aligned_cols=58  Identities=10%  Similarity=0.068  Sum_probs=45.4

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCCCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAGQAMM  223 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~p~~  223 (229)
                      ++.+|+|.|+++.||..++..|+++|.+|+++++...                     ++.+.++..|.||..++....
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~   92 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG   92 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeeccccccc
Confidence            6789999999999999999999999999999855321                     122446678999887765443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.05  E-value=0.0014  Score=54.49  Aligned_cols=37  Identities=27%  Similarity=0.428  Sum_probs=34.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.++|.|+|.=+|+.+|..|+++||+|.++.+.
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~   38 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS   38 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            3789999999999999999999999999999999763

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.02  E-value=0.0025  Score=48.80  Aligned_cols=35  Identities=11%  Similarity=0.266  Sum_probs=31.2

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSHT  201 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~t  201 (229)
                      .+|||+|||+|.+ |...|..|.++|++ |++.++..
T Consensus         3 ~~~kVaIIGaGpa-Gl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLGAGPA-SISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEECCSHH-HHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEECChHH-HHHHHHHHHHCCCCeEEEEEecC
Confidence            3799999999997 99999999999995 99997753

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=96.01  E-value=0.0029  Score=52.92  Aligned_cols=37  Identities=32%  Similarity=0.302  Sum_probs=33.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ++||+|+|.|+++.+|..++..|+++|+.|..+.+..
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~   42 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTA   42 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence            4789999999999999999999999999999997643

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0019  Score=54.61  Aligned_cols=37  Identities=24%  Similarity=0.390  Sum_probs=34.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.|+|-|+|.-+|+.+|..|+++||+|.++.+.
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~   45 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK   45 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4899999999999999999999999999999999764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.013  Score=44.62  Aligned_cols=66  Identities=23%  Similarity=0.440  Sum_probs=47.2

Q ss_pred             HHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC-------------------CCHHhhh------
Q 027064          155 LELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT-------------------TDPESIV------  208 (229)
Q Consensus       155 ~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t-------------------~~l~~~~------  208 (229)
                      ++.+++.++. .|.+|+|+|.|. +|..+++++...|| +|+++.+..                   .+..+..      
T Consensus        16 ~~a~~~~~~~-~gd~VlI~G~G~-iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~   93 (171)
T d1pl8a2          16 IHACRRGGVT-LGHKVLVCGAGP-IGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQ   93 (171)
T ss_dssp             HHHHHHHTCC-TTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHH
T ss_pred             HHHHHHhCCC-CCCEEEEECCCc-cHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccccccccccccccccccc
Confidence            3455666653 689999999987 59999999999999 688875532                   1222111      


Q ss_pred             --ccCcEEEEecCCCC
Q 027064          209 --READIVIAAAGQAM  222 (229)
Q Consensus       209 --~~aDivisA~g~p~  222 (229)
                        ..+|+||.++|.+.
T Consensus        94 ~g~g~Dvvid~~G~~~  109 (171)
T d1pl8a2          94 LGCKPEVTIECTGAEA  109 (171)
T ss_dssp             HTSCCSEEEECSCCHH
T ss_pred             CCCCceEEEeccCCch
Confidence              24799999999764

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.99  E-value=0.0037  Score=47.46  Aligned_cols=54  Identities=20%  Similarity=0.291  Sum_probs=40.5

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-------------------------CHHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-------------------------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-------------------------~l~~~~~~aDivisA~g~p  221 (229)
                      |+.|||+|. ||.++|..|..++.  .+.+++....                         +-.+.++.||+||.+.|.|
T Consensus         2 KI~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVvitag~~   80 (142)
T d1ojua1           2 KLGFVGAGR-VGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA   80 (142)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred             EEEEECcCH-HHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEEEecccc
Confidence            789999877 69999999987664  4666643210                         1236799999999999987


Q ss_pred             CC
Q 027064          222 MM  223 (229)
Q Consensus       222 ~~  223 (229)
                      .-
T Consensus        81 ~~   82 (142)
T d1ojua1          81 RK   82 (142)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=95.97  E-value=0.0016  Score=53.63  Aligned_cols=37  Identities=38%  Similarity=0.485  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.|+|-|+|.=+|+.+|..|+++||+|.++.+.
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~   39 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN   39 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4799999999999888999999999999999998764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0019  Score=53.34  Aligned_cols=37  Identities=22%  Similarity=0.241  Sum_probs=34.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.|+|.|+|.-+|+.+|..|+++|++|.++.+.
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~   43 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART   43 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            3789999999999999999999999999999998764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.96  E-value=0.0016  Score=53.80  Aligned_cols=37  Identities=32%  Similarity=0.473  Sum_probs=34.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.++|-|+|.-+|+.+|..|+++||+|.++.++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~   38 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH   38 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4799999999999989999999999999999999764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.96  E-value=0.0086  Score=46.65  Aligned_cols=55  Identities=16%  Similarity=0.083  Sum_probs=42.9

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEE-ccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVV-GRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~Vi-G~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -+||++.-++..|.+..---.|.+|+|+ |++..||..+.++....||+|+.+-+.
T Consensus         8 ~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~   63 (189)
T d1gu7a2           8 TISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRD   63 (189)
T ss_dssp             TCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEec
Confidence            3588888888888877644468999998 555668999999999999998766443

>d1tuga1 c.78.1.1 (A:1-150,A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Escherichia coli [TaxId: 562]

Probab=95.96  E-value=0.14  Score=43.15  Aligned_cols=187  Identities=14%  Similarity=0.098  Sum_probs=114.7

Q ss_pred             hcccHHHHHHHHHHHHHHHHHHHhcCC----CCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCH----
Q 027064           11 IIDGKAVAQTIRSEIAEEVRLLSEKYG----KVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSE----   82 (229)
Q Consensus        11 il~G~~la~~i~~~i~~~~~~l~~~~~----~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~----   82 (229)
                      +|+-..+.++=.+.+-+....+++...    ..-.++.+. -  ..|..---+=..++.++|..+..+..+...+.    
T Consensus         9 ~l~~~dls~~ei~~ll~~A~~~K~~~~~~~l~gk~iallF-~--kpSTRTR~SFe~A~~~LGg~~i~~~~~~~~~~~~kg   85 (310)
T d1tuga1           9 IISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCF-F--AASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKG   85 (310)
T ss_dssp             BCCGGGCCHHHHHHHHHHHHHHHHSCCTTTTTTCEEEEEE-S--SCCHHHHHHHHHHHHHTTCEEEEEECCSSCHHHHTS
T ss_pred             cCChhhCCHHHHHHHHHHHHHHhcCCCccccCCCEEEEEe-c--CCCcchhhhHHHHHHHhccccccccccccccccCCC
Confidence            344444433333344444445544321    112345444 3  24666666778899999999987766655432    


Q ss_pred             HHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhC
Q 027064           83 AELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSG  162 (229)
Q Consensus        83 ~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~  162 (229)
                      |-+.+.++-|+.-  +|+|++-.+  .+-......++-   -+   +--+|.|.      ...+.||=+.+=+--+++..
T Consensus        86 Esi~Dt~~vls~~--~d~iv~R~~--~~~~~~~~~~~~---~~---vPVINAg~------~~~~HP~Q~LaD~~Ti~e~~  149 (310)
T d1tuga1          86 ETLADTISVISTY--VDAIVMRHP--QEGAARLATEFS---GN---VPVLNAGD------GSNQHPTQTLLDLFTIQETQ  149 (310)
T ss_dssp             CCHHHHHHHHTTT--CSEEEEEES--SBTHHHHHTTTC---TT---SCEEEEEE------TTSCCHHHHHHHHHHHHHHH
T ss_pred             ccHHHhhhHhhhc--chheeeech--hhhhhHHHHHhc---cC---ccEEECCC------CcccchHHHHHHHHHHHHHc
Confidence            5677777777665  789998765  333222222111   11   23355431      23467998888666666665


Q ss_pred             CCCCCCeEEEEcc---chhhhHHHHHHHhhCC-CEEEEEcCCC---------------------CCHHhhhccCcEEEEe
Q 027064          163 VTIKGKRAVVVGR---SNIVGLPVSLLLLKAD-ATVTIVHSHT---------------------TDPESIVREADIVIAA  217 (229)
Q Consensus       163 ~~l~gk~v~ViG~---s~~VG~pla~~L~~~~-atVtv~~~~t---------------------~~l~~~~~~aDivisA  217 (229)
                      .+++|++++.+|-   +. |-..++.++...+ ..+++|+...                     .+..+.++.||+|..-
T Consensus       150 g~l~~~~i~~vGD~~~~~-v~~S~~~~~~~~~~~~~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~  228 (310)
T d1tuga1         150 GRLDNLHVAMVGDLKYGR-TVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMT  228 (310)
T ss_dssp             SCSSSCEEEEESCTTTCH-HHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHTTTCCEEEESCGGGTTTTCSEEEEC
T ss_pred             CCcccceEEEEeccccCc-chHHHHHHHHhccCceEEEeCCcccccchhcccccccccceeeeeechhhhccCCceeeec
Confidence            5799999999997   44 5788888888775 5788885421                     2566788999988754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.94  E-value=0.0045  Score=52.11  Aligned_cols=58  Identities=19%  Similarity=0.170  Sum_probs=45.4

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-----------------------------CCHHhhhccCcEEEE
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-----------------------------TDPESIVREADIVIA  216 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-----------------------------~~l~~~~~~aDivis  216 (229)
                      +||+|+|.|+++.+|.-++..|+++|++|..+-+..                             ..+.+.+..+|.|+.
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~   89 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence            699999999999999999999999999998764310                             022356778898887


Q ss_pred             ecCCCCC
Q 027064          217 AAGQAMM  223 (229)
Q Consensus       217 A~g~p~~  223 (229)
                      ..+...+
T Consensus        90 ~a~~~~~   96 (342)
T d1y1pa1          90 IASVVSF   96 (342)
T ss_dssp             CCCCCSC
T ss_pred             hcccccc
Confidence            7766554

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.0054  Score=51.06  Aligned_cols=32  Identities=28%  Similarity=0.440  Sum_probs=29.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      |+|+|.|+++.+|+.++..|+++|..|+.+.+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            89999999999999999999999999998753

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.89  E-value=0.0037  Score=48.97  Aligned_cols=33  Identities=36%  Similarity=0.555  Sum_probs=30.2

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -|+|+|||+|.+ |-.+|..|+++|+.|+++.+.
T Consensus         6 ~~kVvVIGaGia-Gl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           6 QKRVVVLGSGVI-GLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             SCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESS
T ss_pred             CCcEEEECccHH-HHHHHHHHHHCCCCEEEEeCC
Confidence            479999999996 999999999999999999764

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.88  E-value=0.0059  Score=44.70  Aligned_cols=37  Identities=24%  Similarity=0.334  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +-.+|+|+|||.|.+ |--+|..|.+.|..||+.++..
T Consensus        27 ~~~~k~vvViGgG~i-G~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          27 DPEVNNVVVIGSGYI-GIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CTTCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCEEEEECChHH-HHHHHHHhhccceEEEEEEecC
Confidence            346899999999995 9999999999999999997753

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.87  E-value=0.0098  Score=42.12  Aligned_cols=56  Identities=13%  Similarity=0.190  Sum_probs=43.8

Q ss_pred             CCCeEEEEccchhhh-HHHHHHHhhCCCEEEEEcCCCC----------------CHHhhhccCcEEEEecCCCC
Q 027064          166 KGKRAVVVGRSNIVG-LPVSLLLLKADATVTIVHSHTT----------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG-~pla~~L~~~~atVtv~~~~t~----------------~l~~~~~~aDivisA~g~p~  222 (229)
                      +.|++-+||-|++ | .++|.+|.++|++|+-++....                .-.+.+..+|.||...+.|.
T Consensus         7 ~~~~ihfiGigG~-GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i~~~d~vV~S~AI~~   79 (96)
T d1p3da1           7 RVQQIHFIGIGGA-GMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKD   79 (96)
T ss_dssp             TCCEEEEETTTST-THHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEECTTSCT
T ss_pred             hCCEEEEEEECHH-HHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccccCCCCCEEEECCCcCC
Confidence            4689999999997 8 5569999999999999987532                11245788899988877653

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=95.85  E-value=0.0057  Score=48.79  Aligned_cols=35  Identities=14%  Similarity=0.261  Sum_probs=31.6

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      =|||+|.|+++.+|+.++..|+++|..|+...+..
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence            38999999999999999999999999999887653

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.0025  Score=52.32  Aligned_cols=36  Identities=31%  Similarity=0.410  Sum_probs=33.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.||.|+|-|+|.=+|+.+|..|+++|++|.++.+.
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~   36 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN   36 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            479999999999888999999999999999999764

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.83  E-value=0.0084  Score=45.63  Aligned_cols=54  Identities=22%  Similarity=0.394  Sum_probs=38.1

Q ss_pred             eEEEEccchhhhHHHHHHHh-hCC--CEEEEEcCCCC-----------------------CHHhhhccCcEEEEecCCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLL-KAD--ATVTIVHSHTT-----------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~-~~~--atVtv~~~~t~-----------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      ||+|||.++.||..+|.+|. +.+  ..+.+.+....                       +..+.+++||+||.+.|.|.
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~~~   81 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVRR   81 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSCCC
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCccC
Confidence            78999975557999998875 333  35666654211                       22356889999999999874

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=95.82  E-value=0.0026  Score=52.55  Aligned_cols=36  Identities=14%  Similarity=0.281  Sum_probs=33.6

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      |+||.++|-|+|.=+|+.++..|+++||+|.++.+.
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~   37 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS   37 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            789999999999989999999999999999999764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.81  E-value=0.0074  Score=48.67  Aligned_cols=33  Identities=12%  Similarity=0.256  Sum_probs=30.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|+|.|+++.+|+.++..|+++|.+|+++.|.
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~   36 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRP   36 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence            579999999999999999999999999988764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.77  E-value=0.007  Score=46.34  Aligned_cols=54  Identities=20%  Similarity=0.193  Sum_probs=41.2

Q ss_pred             CcccCCHHHHHHHHHHhCCCC-CCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          145 LFLPCTPKGCLELLKRSGVTI-KGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       145 ~~~PcTa~av~~lL~~~~~~l-~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      ..+||...-.++.|++.+..+ .|..|+|+|.|. +|...++++...|+ +|+++.+
T Consensus        10 A~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~-vG~~~~~~a~~~g~~~vv~~~~   65 (172)
T d1h2ba2          10 APLADAGITAYRAVKKAARTLYPGAYVAIVGVGG-LGHIAVQLLKVMTPATVIALDV   65 (172)
T ss_dssp             GGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSH-HHHHHHHHHHHHCCCEEEEEES
T ss_pred             hHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCCh-HHHHHHHHHHhhcCcccccccc
Confidence            356887777777777765433 589999999988 59999999988887 6666644

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.71  E-value=0.0023  Score=53.17  Aligned_cols=36  Identities=31%  Similarity=0.506  Sum_probs=33.6

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      |+||.++|-|+|.=+|+.+|..|+++||+|.++.+.
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~   37 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN   37 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            789999999999989999999999999999998763

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.71  E-value=0.0037  Score=50.69  Aligned_cols=36  Identities=17%  Similarity=0.307  Sum_probs=30.8

Q ss_pred             CCCCCeEEEEccc---hhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRS---NIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s---~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -|+||+++|.|++   + +|+.+|..|+++||+|.++.+.
T Consensus         3 ~l~gK~~lItGaag~~G-IG~aiA~~la~~Ga~Vil~~~~   41 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSS-IAFHIARVAQEQGAQLVLTGFD   41 (268)
T ss_dssp             TTTTCEEEECCCSSTTC-HHHHHHHHHHHTTCEEEEEECS
T ss_pred             CCCCCEEEEECCCCCCH-HHHHHHHHHHHcCCEEEEEeCC
Confidence            3789999999952   4 4999999999999999998653

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=95.62  E-value=0.0026  Score=52.19  Aligned_cols=37  Identities=27%  Similarity=0.476  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+||.++|-|++.=+|+.++..|+++||+|.++.+.
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~   39 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH   39 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            3899999999999989999999999999999999763

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.61  E-value=0.0044  Score=47.30  Aligned_cols=55  Identities=16%  Similarity=0.345  Sum_probs=39.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC----E---EEEEcCC--------------------------CCCHHhhhccCcEE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA----T---VTIVHSH--------------------------TTDPESIVREADIV  214 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a----t---Vtv~~~~--------------------------t~~l~~~~~~aDiv  214 (229)
                      -||+|+|+++.||..++.+|...+.    .   ..++...                          +.+..+.+++||+|
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~advV   84 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYA   84 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccEE
Confidence            4899999976689999999987543    1   1122110                          12456789999999


Q ss_pred             EEecCCCC
Q 027064          215 IAAAGQAM  222 (229)
Q Consensus       215 isA~g~p~  222 (229)
                      |.+.|.|.
T Consensus        85 iitaG~~~   92 (154)
T d1y7ta1          85 LLVGAAPR   92 (154)
T ss_dssp             EECCCCCC
T ss_pred             EeecCcCC
Confidence            99999774

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.60  E-value=0.0057  Score=46.98  Aligned_cols=55  Identities=13%  Similarity=0.086  Sum_probs=40.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEE--cCCCC--------------------CHHhhhccCcEEEEecCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIV--HSHTT--------------------DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~--~~~t~--------------------~l~~~~~~aDivisA~g~p~  222 (229)
                      ++|+|.|+++.+|+.++..|+++|..|+++  .+...                    ++.+.++..|.||...+...
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~   80 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAVP   80 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccceeeEEEEeecc
Confidence            689999999999999999999999764443  22110                    13355788999998877543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.60  E-value=0.013  Score=45.63  Aligned_cols=54  Identities=15%  Similarity=0.201  Sum_probs=39.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-----------CHH----hhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-----------DPE----SIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-----------~l~----~~~~~aDivisA~g~p  221 (229)
                      |+|+|.|+++.+|+.++..|+++|.  +|+.+.++..           ++.    ......|.||.++|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcccccccccchhhhhhccccchheeeeeeeee
Confidence            8999999999999999999999987  5665544321           222    2233369999988754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.58  E-value=0.0072  Score=46.66  Aligned_cols=52  Identities=12%  Similarity=0.139  Sum_probs=41.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------------CHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------------~l~~~~~~aDivisA~g~  220 (229)
                      ++|-+||-|.+ |.|+|..|+++|..|++++++..                      ++.+....+|+++.....
T Consensus         3 ~nIg~IGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~   76 (176)
T d2pgda2           3 ADIALIGLAVM-GQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKA   76 (176)
T ss_dssp             BSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCT
T ss_pred             CcEEEEeEhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCc
Confidence            68999999996 99999999999999999987532                      122456677888876544

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.55  E-value=0.019  Score=44.07  Aligned_cols=55  Identities=31%  Similarity=0.433  Sum_probs=46.2

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      +++|++|++||-+..|.+.++.+|..-|+++++|.-..                         .+..+.++.||+|.+-.
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~adviy~~~   80 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV   80 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEecccccCCChHHHHHHHHhhhcccceEEEecCHHHHhhhccEEeecc
Confidence            47899999999999999999999999999999995432                         25567899999988653

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.53  E-value=0.017  Score=40.43  Aligned_cols=53  Identities=21%  Similarity=0.189  Sum_probs=40.9

Q ss_pred             CeEEEEccchhhhH-HHHHHHhhCCCEEEEEcCCCC----CHH------------hhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGL-PVSLLLLKADATVTIVHSHTT----DPE------------SIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~-pla~~L~~~~atVtv~~~~t~----~l~------------~~~~~aDivisA~g~p  221 (229)
                      .++-.||-|++ |. ++|.+|+++|+.|+-++....    .|+            +.+..+|+||...+.|
T Consensus         2 ~~ihfiGIgG~-GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVGIGGI-GMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSCCCCSEEEECTTCC
T ss_pred             cEEEEEeECHH-HHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeecccccCCCCEEEEecCcC
Confidence            47888999996 87 789999999999999987632    111            4467889888777765

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.53  E-value=0.0074  Score=44.33  Aligned_cols=30  Identities=10%  Similarity=0.298  Sum_probs=27.5

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +|+|+|.|.+ |+.++..|.++|..|++...
T Consensus         2 ~IvI~G~G~~-G~~la~~L~~~g~~v~vid~   31 (132)
T d1lssa_           2 YIIIAGIGRV-GYTLAKSLSEKGHDIVLIDI   31 (132)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEEES
T ss_pred             EEEEECCCHH-HHHHHHHHHHCCCCcceecC
Confidence            7999999885 99999999999999999865

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=95.49  E-value=0.009  Score=48.80  Aligned_cols=35  Identities=23%  Similarity=0.268  Sum_probs=31.9

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .||.++|-|+|.=+|+.+|..|+++||+|.++.+.
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~   35 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG   35 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            48999999999989999999999999999999764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.49  E-value=0.008  Score=44.33  Aligned_cols=35  Identities=14%  Similarity=0.275  Sum_probs=31.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ..++++|||.|-+ |--+|..|.+.|..||++++..
T Consensus        25 ~p~~vvIiGgG~I-G~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGGGII-GLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESCSHH-HHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECCCHH-HHHHHHHhhcCCCEEEEEEeec
Confidence            3589999999995 9999999999999999998754

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.49  E-value=0.0093  Score=46.53  Aligned_cols=52  Identities=33%  Similarity=0.471  Sum_probs=39.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------------------CHHhhhccCcEEEE
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------------------DPESIVREADIVIA  216 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------------------~l~~~~~~aDivis  216 (229)
                      +|.|||.|- ||.|+|..|+ +|.+|+..+....                                +......++|+++.
T Consensus         2 kI~ViGlG~-vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~g~~p~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~ii~v   79 (196)
T d1dlja2           2 KIAVAGSGY-VGLSLGVLLS-LQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII   79 (196)
T ss_dssp             EEEEECCSH-HHHHHHHHHT-TTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred             EEEEECCCh-hHHHHHHHHH-CCCcEEEEECCHHHHHHHhhcccccchhhHHHHhhhhhhhhhccchhhhhhhccccccc
Confidence            789999887 6999998775 6999998864211                                22244678999999


Q ss_pred             ecCCCC
Q 027064          217 AAGQAM  222 (229)
Q Consensus       217 A~g~p~  222 (229)
                      +|+.|.
T Consensus        80 ~vpt~~   85 (196)
T d1dlja2          80 ATPTNY   85 (196)
T ss_dssp             CCCCCE
T ss_pred             cCCccc
Confidence            998774

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.48  E-value=0.0062  Score=45.14  Aligned_cols=34  Identities=29%  Similarity=0.463  Sum_probs=29.5

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCC--CEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~  200 (229)
                      +||+|+|||.|.+ |-.+|..|.+.+  .+||+.++.
T Consensus         1 ~gkrivIvGgG~~-G~e~A~~l~~~~~~~~Vtlie~~   36 (186)
T d1fcda1           1 AGRKVVVVGGGTG-GATAAKYIKLADPSIEVTLIEPN   36 (186)
T ss_dssp             CCCEEEEECCSHH-HHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCCcEEEECccHH-HHHHHHHHHHcCCCCcEEEEECC
Confidence            5999999999996 999999998876  478988654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=95.45  E-value=0.007  Score=46.79  Aligned_cols=53  Identities=13%  Similarity=-0.012  Sum_probs=41.9

Q ss_pred             ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ++|+...++..|.+..---.|.+|+|.|+|..||..++++....||+|+..-+
T Consensus        10 lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~   62 (182)
T d1v3va2          10 IGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG   62 (182)
T ss_dssp             TSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             HhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCC
Confidence            46666666666665543347999999999999999999999999999887644

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.45  E-value=0.0088  Score=45.56  Aligned_cols=56  Identities=13%  Similarity=0.210  Sum_probs=39.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC-------EEEEEcCC--------------------------CCCHHhhhccCcEE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA-------TVTIVHSH--------------------------TTDPESIVREADIV  214 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a-------tVtv~~~~--------------------------t~~l~~~~~~aDiv  214 (229)
                      -||+|||+++.||..++..|.+.+.       .....+..                          +.+.++.++++|||
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvV   83 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVA   83 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceEE
Confidence            3899999866689999998876432       12223221                          01455779999999


Q ss_pred             EEecCCCCC
Q 027064          215 IAAAGQAMM  223 (229)
Q Consensus       215 isA~g~p~~  223 (229)
                      |.+.|.|.-
T Consensus        84 Vitag~~~~   92 (154)
T d5mdha1          84 ILVGSMPRR   92 (154)
T ss_dssp             EECCSCCCC
T ss_pred             EEecccCCC
Confidence            999998764

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=95.43  E-value=0.017  Score=46.86  Aligned_cols=60  Identities=20%  Similarity=0.284  Sum_probs=47.5

Q ss_pred             CCCCCeEEEEcc----------------chhhhHHHHHHHhhCCCEEEEEcCCCC--------------------CHHhh
Q 027064          164 TIKGKRAVVVGR----------------SNIVGLPVSLLLLKADATVTIVHSHTT--------------------DPESI  207 (229)
Q Consensus       164 ~l~gk~v~ViG~----------------s~~VG~pla~~L~~~~atVtv~~~~t~--------------------~l~~~  207 (229)
                      +|+||+|+|-+.                |+-.|..+|..+..+||.||++|..+.                    .+.+.
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~~~~~t~~~m~~~~~~~   82 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNAS   82 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcccccccceehhhHHHHHHHHhh
Confidence            688999998763                455799999999999999999988542                    12255


Q ss_pred             hccCcEEEEecCCCCC
Q 027064          208 VREADIVIAAAGQAMM  223 (229)
Q Consensus       208 ~~~aDivisA~g~p~~  223 (229)
                      ++++|++|.+.-...|
T Consensus        83 ~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          83 VQQQNIFIGCAAVADY   98 (223)
T ss_dssp             GGGCSEEEECCBCCSE
T ss_pred             hccceeEeeeechhhh
Confidence            7899999998876666

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.43  E-value=0.0085  Score=46.84  Aligned_cols=52  Identities=31%  Similarity=0.321  Sum_probs=42.4

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ||+-++.-|++.+....+.+|+|.|+++-||....++....||+|+.+-+..
T Consensus        15 TA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~   66 (177)
T d1o89a2          15 TAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (177)
T ss_dssp             HHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecch
Confidence            6666666677777666777999999999999999999999999988765543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.43  E-value=0.008  Score=41.13  Aligned_cols=53  Identities=30%  Similarity=0.325  Sum_probs=41.7

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      |++-++.-+.+.+..-.|.+++|.|.+.-||.-+.+++...|++|+.+-+..+
T Consensus        15 TA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~   67 (77)
T d1o8ca2          15 TAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES   67 (77)
T ss_dssp             HHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             HHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHH
Confidence            55555555666665568999999999999999999999999999887655443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.42  E-value=0.014  Score=45.56  Aligned_cols=52  Identities=23%  Similarity=0.218  Sum_probs=40.5

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ||+-+++-|...+..-.|.+|+|-|+|+-||..+.+++...||+|+.+-+..
T Consensus        15 TA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~   66 (176)
T d1xa0a2          15 TAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA   66 (176)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             HHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCch
Confidence            5654555455556566799999999988899999999999999887765543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.40  E-value=0.0088  Score=47.03  Aligned_cols=37  Identities=24%  Similarity=0.394  Sum_probs=33.4

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ...+|+|+|||+|.. |..+|..|.++|.+|+++.+..
T Consensus        40 ~~~~k~V~IIGaGPA-GL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPA-GLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECccHH-HHHHHHHHHhhccceEEEeccC
Confidence            357899999999998 9999999999999999997753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.39  E-value=0.005  Score=46.46  Aligned_cols=50  Identities=18%  Similarity=0.211  Sum_probs=38.2

Q ss_pred             eEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCCCH--------------HhhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTTDP--------------ESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~~l--------------~~~~~~aDivisA~g  219 (229)
                      ++.+||.|.+ |.+++.-|.+.| ..|+++++....+              .+.++++|+||-|+.
T Consensus         2 kI~fIG~G~M-G~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~v~~~Div~lavk   66 (152)
T d1yqga2           2 NVYFLGGGNM-AAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELHSDDVLILAVK   66 (152)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCCTTSEEEECSC
T ss_pred             EEEEEcCcHH-HHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccccccccceEEEecC
Confidence            6899999996 999999877666 6899997753211              133677899998874

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=95.38  E-value=0.01  Score=49.41  Aligned_cols=51  Identities=20%  Similarity=0.197  Sum_probs=42.0

Q ss_pred             ccCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEc
Q 027064          147 LPCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVH  198 (229)
Q Consensus       147 ~PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~  198 (229)
                      -.+|.+|++..+++    .+.+++||+|+|=|.|+ ||..++.+|.+.|+.|+ +.+
T Consensus        12 ~eATG~Gv~~~~~~~~~~~~~~l~g~~v~IQGfGn-VG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          12 PEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGN-VAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSH-HHHHHHHHHHHHTCEEEEEEE
T ss_pred             CccchHHHHHHHHHHHHhCCCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEec
Confidence            35788887766555    47899999999999999 69999999999999754 443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.37  E-value=0.0095  Score=45.13  Aligned_cols=51  Identities=12%  Similarity=0.093  Sum_probs=38.2

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC----------------CH-HhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT----------------DP-ESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~----------------~l-~~~~~~aDivisA~g  219 (229)
                      |+|.|||.|.+ |..+|..|.+.|.  +|+.+++...                +. ......+|+||.|+.
T Consensus         2 k~I~IIG~G~m-G~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p   71 (171)
T d2g5ca2           2 QNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSP   71 (171)
T ss_dssp             CEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSC
T ss_pred             CEEEEEccCHH-HHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCC
Confidence            68999999996 9999999999885  6777765321                11 122357899999886

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.35  E-value=0.014  Score=45.15  Aligned_cols=53  Identities=19%  Similarity=0.174  Sum_probs=43.7

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      ||+..+..|.+.+....|..|+|-|+++-||..+.++....||+|+.+-+...
T Consensus         7 TA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~   59 (167)
T d1tt7a2           7 TAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE   59 (167)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSS
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHH
Confidence            67777777777776667888999999888999999999999999887766543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.33  E-value=0.025  Score=43.10  Aligned_cols=54  Identities=20%  Similarity=0.198  Sum_probs=38.1

Q ss_pred             CcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          145 LFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       145 ~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      ..++|.-.-.+.-+.+.+---.|..|+|+|.|. +|-..++++...|+ +|+.+.+
T Consensus         7 a~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG-~G~~~~~~~~~~g~~~Vi~~~~   61 (176)
T d2jhfa2           7 CLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGG-VGLSVIMGCKAAGAARIIGVDI   61 (176)
T ss_dssp             GGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECS
T ss_pred             hHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCC-cHHHHHHHHHHcCCceEEeecC
Confidence            356776555554444443334799999999999 58888888888886 6777655

>d1nvta2 c.58.1.5 (A:1-110) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.33  E-value=0.0013  Score=48.13  Aligned_cols=67  Identities=15%  Similarity=0.218  Sum_probs=47.2

Q ss_pred             HHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchh
Q 027064           61 RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIG  135 (229)
Q Consensus        61 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g  135 (229)
                      .+.+++.|++..+..++  +++++|.+.++.+.+. ++.|+.|++|+++     .+++.++- ..++.-+.++|+-
T Consensus        31 n~~~~~~gi~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K~-----~~~~~~d~~s~~a~~igavNti   98 (110)
T d1nvta2          31 NAAFKDKGLNYVYVAFD--VLPENLKYVIDGAKAL-GIVGFNVTIPHKI-----EIMKYLDEIDKDAQLIGAVNTI   98 (110)
T ss_dssp             HHHHHHTTCCEEEEEEE--CCGGGGGGHHHHHHHH-TCCEEEECTTSTT-----GGGGGCSEECHHHHHHTCCCEE
T ss_pred             HHHHHHcCCcEEEeecc--cCHHHHHHHHHhhccc-CcchhheehHHHH-----HHHHHhccCCHHHHHhCcEEEE
Confidence            67889999999998886  4455555555555433 6999999999994     56666654 4455556777763

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.32  E-value=0.0088  Score=49.11  Aligned_cols=48  Identities=27%  Similarity=0.308  Sum_probs=38.5

Q ss_pred             CCHHHHH----HHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhh-CCCEEEEE
Q 027064          149 CTPKGCL----ELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK-ADATVTIV  197 (229)
Q Consensus       149 cTa~av~----~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~-~~atVtv~  197 (229)
                      +|.+|+.    ..+++.+.+++||+|+|=|.|. ||.-++..|.+ .|+.|+.+
T Consensus         9 ATg~Gv~~~~~~~~~~~~~~l~g~~vaIqG~Gn-VG~~~a~~L~~e~Ga~vv~v   61 (234)
T d1b26a1           9 ATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGN-VGQFAALLISQELGSKVVAV   61 (234)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSH-HHHHHHHHHHHHHCCEEEEE
T ss_pred             hhhHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHhcCCceEEe
Confidence            5667766    4556668899999999999999 59999999975 59986544

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.32  E-value=0.017  Score=43.80  Aligned_cols=54  Identities=24%  Similarity=0.287  Sum_probs=39.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC-C--------C----------------HHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT-T--------D----------------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t-~--------~----------------l~~~~~~aDivisA~g~p  221 (229)
                      ||+|||+.+.||..+|..|..++.  .+.+.+... +        |                -.+.++.|||||.+.|.|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~aDiVvitaG~~   81 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGIP   81 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhhcCEEEEecccc
Confidence            799999544479999999998876  466654211 0        1                124588999999999977


Q ss_pred             C
Q 027064          222 M  222 (229)
Q Consensus       222 ~  222 (229)
                      .
T Consensus        82 ~   82 (142)
T d1o6za1          82 R   82 (142)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.24  E-value=0.012  Score=42.79  Aligned_cols=34  Identities=15%  Similarity=0.193  Sum_probs=31.4

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      .|+++|||.|.+ |--+|..|.+.|+.||++++..
T Consensus        22 p~~v~IiGgG~i-G~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGSGYI-AVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECCchH-HHHHHHHHHhccccceeeehhc
Confidence            589999999996 9999999999999999998864

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.22  E-value=0.011  Score=47.60  Aligned_cols=39  Identities=15%  Similarity=0.313  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEccch--hhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          164 TIKGKRAVVVGRSN--IVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       164 ~l~gk~v~ViG~s~--~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      -|+||.|+|-|.|.  =+|+.+|..|+++|++|.++.+..+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~   42 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK   42 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            37899999999875  2489999999999999999877543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.17  E-value=0.013  Score=42.33  Aligned_cols=34  Identities=21%  Similarity=0.290  Sum_probs=31.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      -|+++|||+|.+ |--+|..|.+.|+.||++++..
T Consensus        21 p~~vvIiGgG~i-g~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYI-GVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECCChh-hHHHHHHhhccccEEEEEeecc
Confidence            489999999995 9999999999999999998865

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.06  E-value=0.015  Score=47.74  Aligned_cols=51  Identities=25%  Similarity=0.338  Sum_probs=38.6

Q ss_pred             cCCHHHHHH----HHHHhCC-CCCCCeEEEEccchhhhHHHHHHHhh-CCCEE-EEEcC
Q 027064          148 PCTPKGCLE----LLKRSGV-TIKGKRAVVVGRSNIVGLPVSLLLLK-ADATV-TIVHS  199 (229)
Q Consensus       148 PcTa~av~~----lL~~~~~-~l~gk~v~ViG~s~~VG~pla~~L~~-~~atV-tv~~~  199 (229)
                      -+|++|+..    .+++++. +++||+|+|-|-|. ||..++.+|.+ .|+.| ++.++
T Consensus         8 eATg~Gv~~~~~~~~~~~g~~~l~g~~v~IqGfGn-VG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1           8 EATARGASYTIREAAKVLGWDTLKGKTIAIQGYGN-AGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             THHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSH-HHHHHHHHHHHTTCCEEEEEECS
T ss_pred             chhhHHHHHHHHHHHHHhCCCCcCCCEEEEECCCH-HHHHHHHHHHHhcCcceeecccc
Confidence            357788774    4555565 49999999999999 69999999975 58864 44443

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.04  E-value=0.0077  Score=47.74  Aligned_cols=35  Identities=20%  Similarity=0.273  Sum_probs=31.6

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +|.++|-|+|.-+|+.+|..|+++||+|.++.++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~   35 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRR   35 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            48999999988889999999999999999997754

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=95.01  E-value=0.01  Score=47.31  Aligned_cols=34  Identities=29%  Similarity=0.451  Sum_probs=31.0

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..|+|+|||+|.. |...|..|+++|..|++....
T Consensus        29 ~pkkV~IIGaG~a-GLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          29 NPKHVVIVGAGMA-GLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             SCCEEEEECCBHH-HHHHHHHHHHHTCEEEEECSS
T ss_pred             CCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEeCC
Confidence            4689999999997 999999999999999999754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.00  E-value=0.023  Score=40.63  Aligned_cols=35  Identities=26%  Similarity=0.343  Sum_probs=31.7

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      .|+++|||+|-+ |--+|..|.+.|..||++++..+
T Consensus        22 p~~v~IiGgG~i-g~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGGGYI-GIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECCCcc-ceeeeeeecccccEEEEEEecce
Confidence            489999999995 99999999999999999987653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.98  E-value=0.0069  Score=45.19  Aligned_cols=32  Identities=19%  Similarity=0.339  Sum_probs=27.7

Q ss_pred             eEEEE-ccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          169 RAVVV-GRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       169 ~v~Vi-G~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      ||.|| |.|. +|+.+|..|++.|++|++..|..
T Consensus         2 ki~vigGaG~-iG~alA~~la~~G~~V~l~~R~~   34 (212)
T d1jaya_           2 RVALLGGTGN-LGKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             EEEEETTTSH-HHHHHHHHHHTTTCEEEEEESSH
T ss_pred             EEEEEeCCcH-HHHHHHHHHHHCCCEEEEEECCH
Confidence            68898 6676 69999999999999999997753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.015  Score=45.45  Aligned_cols=34  Identities=21%  Similarity=0.358  Sum_probs=30.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +-++|+|||+|-. |...|..|.++|..|+|+...
T Consensus         4 ~~~kViVIGaG~a-GL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIGSGVS-GLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEECCBHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECCCHH-HHHHHHHHHhCCCCEEEEeCC
Confidence            3478999999998 999999999999999999654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.96  E-value=0.015  Score=42.31  Aligned_cols=33  Identities=27%  Similarity=0.444  Sum_probs=30.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      |+++|||+|-+ |--+|.+|.+.|+.||+.++..
T Consensus        24 ~~~vIiG~G~i-g~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIGGGII-GLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEECCCch-HHHHHHHHHhhCcceeEEEecc
Confidence            89999999995 9999999999999999998764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.93  E-value=0.017  Score=42.73  Aligned_cols=35  Identities=34%  Similarity=0.526  Sum_probs=32.1

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      .+|+++|||+|.+ |--+|..|.+.|.+||++++..
T Consensus        34 ~~k~v~VIGgG~i-G~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGGGYI-GLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECCchH-HHHHHHHHHhhCcceeeeeecc
Confidence            4799999999996 9999999999999999998864

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.87  E-value=0.017  Score=49.05  Aligned_cols=48  Identities=25%  Similarity=0.227  Sum_probs=39.2

Q ss_pred             CCHHHHHHHHHHh------------CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          149 CTPKGCLELLKRS------------GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       149 cTa~av~~lL~~~------------~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      +|.+|+...++..            ..+++||+|+|=|.|+ ||..+|..|.+.||+|+.+
T Consensus         6 ATG~GV~~~~~~~l~~~~~~~~~gl~~~L~gktvaIqGfGn-VG~~~A~~L~e~Gakvv~v   65 (293)
T d1hwxa1           6 ATGRGVFHGIENFIENASYMSILGMTPGFGDKTFAVQGFGN-VGLHSMRYLHRFGAKCVAV   65 (293)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHTCCSSSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEE
T ss_pred             HhHHHHHHHHHHHHHhcccchhccCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence            5777777777653            2478999999999999 5999999999999986543

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.84  E-value=0.0044  Score=52.85  Aligned_cols=79  Identities=16%  Similarity=0.241  Sum_probs=61.5

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhh----CCC-------EEEEEcCCC---C-------------
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADA-------TVTIVHSHT---T-------------  202 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~----~~a-------tVtv~~~~t---~-------------  202 (229)
                      |-.|++.-|+-.+.+++.-++|+.|+|.. |-.++.+|..    .|.       .+++|+++-   +             
T Consensus         8 ~lAglinAlki~gk~l~d~kiv~~GAGsA-g~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~~~k~~~   86 (294)
T d1pj3a1           8 ALAGLLAAQKVISKPISEHKILFLGAGEA-ALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPF   86 (294)
T ss_dssp             HHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGG
T ss_pred             HHHHHHHHHHHhCCCHHHcEEEEECccHH-HHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccHHHHHHh
Confidence            45788888999999999999999999997 8888888653    343       388887621   0             


Q ss_pred             ----------CHHhhhc--cCcEEEEecCCCCCCCCCCC
Q 027064          203 ----------DPESIVR--EADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       203 ----------~l~~~~~--~aDivisA~g~p~~i~~~~v  229 (229)
                                +|.+.++  ++|++|-.+|.|+.++.|||
T Consensus        87 a~~~~~~~~~~L~e~i~~~kptvliG~S~~~g~ft~evi  125 (294)
T d1pj3a1          87 THSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVI  125 (294)
T ss_dssp             CBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHH
T ss_pred             hccccccchhHHHHHHHhcCCceEEEecCCCCcCCHHHH
Confidence                      3455554  78999999999999997753

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.84  E-value=0.0098  Score=42.39  Aligned_cols=37  Identities=14%  Similarity=0.047  Sum_probs=31.0

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +++||+|+|||.|.. |-=+|..|+....+|++++++.
T Consensus        29 ~f~gK~VlVVG~g~S-a~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          29 LFVGESVLVVGGASS-ANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGTTCCEEEECSSHH-HHHHHHHHTTTSCSSEEEECTT
T ss_pred             hcCCCeEEEECCCCC-HHHHHHHHHHhcCEEEEEEecC
Confidence            578999999999998 9999999998877766665543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.018  Score=48.67  Aligned_cols=32  Identities=22%  Similarity=0.235  Sum_probs=30.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      |.|+|.|+++.||..++..|+++|.+|+.+.+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r   33 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKR   33 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            78889999999999999999999999998876

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=94.78  E-value=0.029  Score=43.75  Aligned_cols=58  Identities=14%  Similarity=0.221  Sum_probs=41.2

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCC---C----EEEEEcCC--------------------------CCCHHhhhccCc
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKAD---A----TVTIVHSH--------------------------TTDPESIVREAD  212 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~---a----tVtv~~~~--------------------------t~~l~~~~~~aD  212 (229)
                      +--+|+|+|+++-||.+++.+|.+.+   .    .+.+.+..                          +.+..+.+++||
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aD  102 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD  102 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCc
Confidence            34689999986678999999998642   1    23333321                          125567799999


Q ss_pred             EEEEecCCCCC
Q 027064          213 IVIAAAGQAMM  223 (229)
Q Consensus       213 ivisA~g~p~~  223 (229)
                      +||...|.|.-
T Consensus       103 vVvi~ag~~rk  113 (175)
T d7mdha1         103 WALLIGAKPRG  113 (175)
T ss_dssp             EEEECCCCCCC
T ss_pred             eEEEeeccCCC
Confidence            99999998753

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.75  E-value=0.031  Score=44.49  Aligned_cols=39  Identities=38%  Similarity=0.535  Sum_probs=32.4

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHh--------------------hCCC-EEEEEcCCCC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLL--------------------KADA-TVTIVHSHTT  202 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~--------------------~~~a-tVtv~~~~t~  202 (229)
                      .++.||+|+|||.|+ |+.=+|.+|+                    +.|+ +|+++-+++.
T Consensus        35 ~~~~gk~VvVIGgGN-vAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~   94 (216)
T d1lqta1          35 PDLSGARAVVIGNGN-VALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP   94 (216)
T ss_dssp             CCCCSSEEEEECCSH-HHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred             ccccCceEEEECCCc-hhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECCh
Confidence            567899999999999 4999998887                    5677 7999977653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.71  E-value=0.014  Score=42.37  Aligned_cols=34  Identities=26%  Similarity=0.416  Sum_probs=31.2

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +|+++|||.|-+ |--+|..|.+.|+.||++++..
T Consensus        32 ~~~vvIiGgG~i-G~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGGGFI-GLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEECSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECCcHH-HHHHHHHhhcccceEEEEeccc
Confidence            589999999996 9999999999999999998754

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.64  E-value=0.024  Score=44.87  Aligned_cols=54  Identities=24%  Similarity=0.350  Sum_probs=46.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g  219 (229)
                      +++|+|.|||.|.- |+.=|..|...|.+|++-.+...              +..+..+.||||.-.++
T Consensus        14 ik~k~IaViGYGsQ-G~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~~~~eA~~~aDiim~L~P   81 (182)
T d1np3a2          14 IQGKKVAIIGYGSQ-GHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTP   81 (182)
T ss_dssp             HHTSCEEEECCSHH-HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSC
T ss_pred             HCCCEEEEEeeCcH-hHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccccHHHHhhhcCeeeeecc
Confidence            46899999999997 99999999999999999877532              46688999999986654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.62  E-value=0.013  Score=49.83  Aligned_cols=32  Identities=34%  Similarity=0.523  Sum_probs=29.7

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      ||+|+|.|+++.+|..++..|+++|++|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            89999999999999999999999999999874

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.60  E-value=0.052  Score=41.76  Aligned_cols=54  Identities=22%  Similarity=0.271  Sum_probs=38.0

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      .++|.-...+.-+.+..-.-.|..|+|+|.|. +|....+.+...|+ +|++++..
T Consensus         9 ~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~Gg-vGl~ai~~ak~~G~~~Vi~vd~~   63 (176)
T d1d1ta2           9 LIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGG-VGLSVIMGCKSAGASRIIGIDLN   63 (176)
T ss_dssp             GGGTHHHHHHHHHHTTSCCCTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSC
T ss_pred             hhhhHHHHHHHHHHHhhCCCCCCEEEEECCCc-hhHHHHHHHHHcCCceEEEecCc
Confidence            45774333333333332234799999999998 59999999999996 78888663

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=94.59  E-value=0.031  Score=45.54  Aligned_cols=75  Identities=23%  Similarity=0.299  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC---CC------------------------
Q 027064          151 PKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH---TT------------------------  202 (229)
Q Consensus       151 a~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~---t~------------------------  202 (229)
                      -.|++.-++-.+.+++..++++.|+|.. |-.++.+|.+.+. .++.++++   |.                        
T Consensus        10 LAgll~a~~~~g~~l~d~riv~~GAGsA-g~gia~~l~~~~~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~~~~~~   88 (222)
T d1vl6a1          10 SAAFLNALKLTEKKIEEVKVVVNGIGAA-GYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLS   88 (222)
T ss_dssp             HHHHHHHHHHHTCCTTTCEEEEECCSHH-HHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCC
T ss_pred             HHHHHHHHHHhCCChhhcEEEEEChHHH-HHHHHHHHHHhcccceEeecceeEEEcCcccccccHHHHHHHhhhcchhhh
Confidence            4678888999999999999999999997 9999999998887 68999875   11                        


Q ss_pred             -CHHhhhccCcEEEEecCCCCCCCCC
Q 027064          203 -DPESIVREADIVIAAAGQAMMVTMG  227 (229)
Q Consensus       203 -~l~~~~~~aDivisA~g~p~~i~~~  227 (229)
                       ++.+.++.+|+++.+. .++.++.|
T Consensus        89 ~~l~~~l~g~~~~~g~~-~~~~~~~e  113 (222)
T d1vl6a1          89 GDLETALEGADFFIGVS-RGNILKPE  113 (222)
T ss_dssp             SCHHHHHTTCSEEEECS-CSSCSCHH
T ss_pred             cchHhhccCcceecccc-ccccccHH
Confidence             3556778888776554 57776643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.56  E-value=0.017  Score=47.34  Aligned_cols=33  Identities=24%  Similarity=0.255  Sum_probs=30.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      |+|+|.|+++.+|+.++..|+++|++|+.+.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~   33 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVAR   33 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECC
Confidence            799999999999999999999999999988664

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.56  E-value=0.027  Score=43.66  Aligned_cols=75  Identities=17%  Similarity=0.170  Sum_probs=49.4

Q ss_pred             ccCCHHHHHHHHHHhCCCCCC--CeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCC--------------------CCC
Q 027064          147 LPCTPKGCLELLKRSGVTIKG--KRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSH--------------------TTD  203 (229)
Q Consensus       147 ~PcTa~av~~lL~~~~~~l~g--k~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~--------------------t~~  203 (229)
                      +|++..-++..|...+---.|  +.|+|-|+++-||..+.++....||. |+.+.+.                    +.+
T Consensus         9 lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~   88 (187)
T d1vj1a2           9 IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGN   88 (187)
T ss_dssp             TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSC
T ss_pred             hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchh
Confidence            466666666666665432334  77999998777899999999999995 4434321                    123


Q ss_pred             HHhhhcc-----CcEEEEecCCC
Q 027064          204 PESIVRE-----ADIVIAAAGQA  221 (229)
Q Consensus       204 l~~~~~~-----aDivisA~g~p  221 (229)
                      ..+.+++     +|+|+.++|.+
T Consensus        89 ~~~~~~~~~~~GvDvv~D~vGg~  111 (187)
T d1vj1a2          89 VAEQLREACPGGVDVYFDNVGGD  111 (187)
T ss_dssp             HHHHHHHHCTTCEEEEEESSCHH
T ss_pred             HHHHHHHHhccCceEEEecCCch
Confidence            3444444     78888888743

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.45  E-value=0.023  Score=44.80  Aligned_cols=34  Identities=32%  Similarity=0.418  Sum_probs=31.0

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..+||+|||+|-. |-.+|..|.++|..|++..+.
T Consensus         3 ~~~kV~IiGaG~a-Gl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGGSIS-GLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECcCHH-HHHHHHHHHHCCCCEEEEeCC
Confidence            4689999999996 999999999999999999764

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.40  E-value=0.027  Score=44.90  Aligned_cols=34  Identities=15%  Similarity=0.155  Sum_probs=30.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      |.|+|-|+|.-+|+.+|..|+++|++|.+++++.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~   35 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            5678889988889999999999999999997754

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.30  E-value=0.041  Score=41.48  Aligned_cols=53  Identities=23%  Similarity=0.178  Sum_probs=38.0

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      .++|.-.-.+.-|.+.+---.|..|+|.|.|. +|...++++...|+ +|+++.+
T Consensus         8 ~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGG-vG~~aiq~ak~~G~~~vi~~~~   61 (176)
T d2fzwa2           8 LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGG-VGLAVIMGCKVAGASRIIGVDI   61 (176)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECS
T ss_pred             HhhcHHHHHHHHHHHhhCCCCCCEEEEecchh-HHHHHHHHHHHHhcCceEEEcc
Confidence            46786555555554433234799999999998 59999999998997 5666644

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.26  E-value=0.021  Score=46.97  Aligned_cols=33  Identities=21%  Similarity=0.166  Sum_probs=30.6

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      |+++|.|+++.+|+.++..|+++|++|+.+.+.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            789999999999999999999999999988753

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=94.24  E-value=0.038  Score=45.90  Aligned_cols=31  Identities=29%  Similarity=0.460  Sum_probs=28.8

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +|+|.|+++.+|..++..|+++|.+|+++.+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~   32 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            6999999999999999999999999998753

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.19  E-value=0.026  Score=45.93  Aligned_cols=33  Identities=27%  Similarity=0.431  Sum_probs=28.5

Q ss_pred             CeE-EEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRA-VVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v-~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ||| +|-|+|.-+|+.+|..|+++||+|.++.+.
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~   34 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN   34 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence            565 667998888999999999999999999774

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=94.15  E-value=0.0039  Score=46.72  Aligned_cols=48  Identities=13%  Similarity=-0.022  Sum_probs=30.7

Q ss_pred             EEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecC
Q 027064          171 VVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       171 ~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g  219 (229)
                      -+||.|.+ |++++..|.+.+.-+.+++|+.              .+..+..+++|+||.|+.
T Consensus         3 gfIG~G~m-g~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~   64 (153)
T d2i76a2           3 NFVGTGTL-TRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVP   64 (153)
T ss_dssp             EEESCCHH-HHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSC
T ss_pred             EEEeCcHH-HHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEecc
Confidence            47999996 9999998876554445776532              134577899999999985

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.13  E-value=0.019  Score=41.86  Aligned_cols=34  Identities=29%  Similarity=0.417  Sum_probs=31.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      .|+++|||.|-+ |--+|..|.+.|+.||+.++..
T Consensus        25 p~~~viiG~G~i-glE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGAGYI-GLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCCSHH-HHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEccchH-HHHHHHHHHhcCCeEEEEEEcc
Confidence            489999999995 9999999999999999998854

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.13  E-value=0.025  Score=47.49  Aligned_cols=35  Identities=23%  Similarity=0.345  Sum_probs=31.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +.|+|+|||+|-. |-.+|..|+++|..|+++.+..
T Consensus         1 k~KKI~IIGaG~s-GL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAGFS-GAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECCcHH-HHHHHHHHHhCCCCEEEEECCC
Confidence            3599999999997 9999999999999999997754

>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=94.11  E-value=0.011  Score=50.61  Aligned_cols=79  Identities=9%  Similarity=0.155  Sum_probs=60.0

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhh----CCC-------EEEEEcCCC---C-------------
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADA-------TVTIVHSHT---T-------------  202 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~----~~a-------tVtv~~~~t---~-------------  202 (229)
                      +..|++.-|+-.+.+++.-++++.|+|.. |-.++.+|..    .|.       .+++|+++-   .             
T Consensus         8 ~lAglinAlki~gk~l~d~kivi~GAGaA-g~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~Glv~~~r~d~~~~k~~~a   86 (308)
T d1o0sa1           8 IVAGLLTCTRVTKKLVSQEKYLFFGAGAA-STGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFA   86 (308)
T ss_dssp             HHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTC
T ss_pred             HHHHHHHHHHHhCCCHHHcEEEEECcCHH-HHHHHHHHHHHHHhcCCchhhhhceEEEEeCCCCccCCCcccCHHHHHHH
Confidence            45688888999999999999999999997 9888887753    342       388887731   1             


Q ss_pred             -------CHHhhhccC--cEEEEecCCCCCCCCCCC
Q 027064          203 -------DPESIVREA--DIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       203 -------~l~~~~~~a--DivisA~g~p~~i~~~~v  229 (229)
                             ++.+.++.+  +++|-++|.|+.++.+||
T Consensus        87 ~~~~~~~~l~~~i~~~kptvliG~s~~~g~ft~evv  122 (308)
T d1o0sa1          87 KDMPETTSILEVIRAARPGALIGASTVRGAFNEEVI  122 (308)
T ss_dssp             BSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHH
T ss_pred             HhcccCCcHHHHHhccccccEEecccccCCCCHHHH
Confidence                   344545543  799999999999987753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.10  E-value=0.03  Score=44.45  Aligned_cols=35  Identities=17%  Similarity=0.300  Sum_probs=32.0

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -.+|+|+|||+|-. |...|..|.++|++|+++...
T Consensus        47 ~~~k~VvIIGaGpA-Gl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          47 KNKDSVLIVGAGPS-GSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             SSCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCceEEEEcccHH-HHHHHHHHHHhccceeeEeec
Confidence            47899999999997 999999999999999999654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=94.07  E-value=0.038  Score=45.06  Aligned_cols=56  Identities=16%  Similarity=0.246  Sum_probs=41.2

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-C------HHhhhc--cCcEEEEecCCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-D------PESIVR--EADIVIAAAGQAM  222 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-~------l~~~~~--~aDivisA~g~p~  222 (229)
                      =|+|+|.|+++.+|+.++..|+++|..|.++..+.. +      +.+.++  .-|.|+-+.+..+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~   66 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVG   66 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhhcCCCEEEEcchhcc
Confidence            379999999999999999999999998887744322 1      223333  3588887775543

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=94.07  E-value=0.023  Score=42.58  Aligned_cols=31  Identities=26%  Similarity=0.389  Sum_probs=28.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      +|+|||+|.. |-.+|..|.++|. +|+|..+.
T Consensus         2 ~V~IIGaG~a-GL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVGAGMS-GISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEECCBHH-HHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECCcHH-HHHHHHHHHhCCCCcEEEEECC
Confidence            6999999997 9999999999996 79999764

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.06  E-value=0.02  Score=42.95  Aligned_cols=32  Identities=19%  Similarity=0.132  Sum_probs=29.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..|+|||+|.. |..+|..|+++|..|+++.++
T Consensus         6 yDviViGaG~~-Gl~~A~~La~~G~~V~vlE~~   37 (297)
T d2bcgg1           6 YDVIVLGTGIT-ECILSGLLSVDGKKVLHIDKQ   37 (297)
T ss_dssp             CSEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             CCEEEECcCHH-HHHHHHHHHHCCCCEEEEcCC
Confidence            46999999997 999999999999999999775

>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=93.99  E-value=0.015  Score=49.57  Aligned_cols=79  Identities=20%  Similarity=0.299  Sum_probs=60.7

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhh----CCC-------EEEEEcCCC---C-------------
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADA-------TVTIVHSHT---T-------------  202 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~----~~a-------tVtv~~~~t---~-------------  202 (229)
                      |-.|++.-++-.+.+++.-++|+.|+|.. |-.++.+|..    .|.       .+++|+++-   .             
T Consensus         8 ~lAglinAlki~gk~l~d~kiV~~GAGsA-g~gia~~l~~~~~~~G~~~~~a~~~i~l~D~kGlv~~~R~~l~~~k~~~a   86 (298)
T d1gq2a1           8 AVAGLLAALRITKNRLSDHTVLFQGAGEA-ALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFA   86 (298)
T ss_dssp             HHHHHHHHHHHHTSCGGGCCEEEECCSHH-HHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGC
T ss_pred             HHHHHHHHHHHhCCCHHHcEEEEECccHH-HHHHHHHHHHHHHHcCCChhhccceEEEEeCCCcccCCCcccCHHHHHHH
Confidence            45788899999999999999999999997 9888888753    231       588887741   1             


Q ss_pred             -------CHHhhhcc--CcEEEEecCCCCCCCCCCC
Q 027064          203 -------DPESIVRE--ADIVIAAAGQAMMVTMGIL  229 (229)
Q Consensus       203 -------~l~~~~~~--aDivisA~g~p~~i~~~~v  229 (229)
                             ++.+.++.  .+++|-++|.|+.++.|||
T Consensus        87 ~~~~~~~~l~~~i~~vkptvliG~s~~~g~ft~evv  122 (298)
T d1gq2a1          87 HEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQIL  122 (298)
T ss_dssp             BSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHH
T ss_pred             HHhhhhhhhHHHhhccChheeEecccccCcCCHHHH
Confidence                   33444443  7899999999999988753

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.97  E-value=0.063  Score=41.88  Aligned_cols=53  Identities=30%  Similarity=0.489  Sum_probs=38.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSHTT---------------------DPESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~  220 (229)
                      .||.|+|+++.||.-+..+|.++ ...+..+-+++.                     +..+...+.|+++.|++.
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~~~~~~dvvf~a~p~   76 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPA   76 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCST
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhHhccccceEEEcccc
Confidence            37999999999999999999875 345555534321                     233445679999999875

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=93.87  E-value=0.042  Score=44.69  Aligned_cols=31  Identities=10%  Similarity=0.304  Sum_probs=28.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      .||+|.|+++.+|..++..|+++|++|+.++
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~~V~~id   31 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGIDLIVFD   31 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            3799999999999999999999999999875

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.84  E-value=0.047  Score=42.22  Aligned_cols=55  Identities=24%  Similarity=0.309  Sum_probs=36.1

Q ss_pred             CCeEEEEccchhhhHHHH--HHHhhCC----CEEEEEcCC--------------------------CCCHHhhhccCcEE
Q 027064          167 GKRAVVVGRSNIVGLPVS--LLLLKAD----ATVTIVHSH--------------------------TTDPESIVREADIV  214 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla--~~L~~~~----atVtv~~~~--------------------------t~~l~~~~~~aDiv  214 (229)
                      .-+|+|||+|.+ |-+.+  .+|....    .++...+..                          |.|..+.++.||+|
T Consensus         3 ~~KI~iIGaGsv-~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~V   81 (167)
T d1u8xx1           3 SFSIVIAGGGST-FTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV   81 (167)
T ss_dssp             CEEEEEECTTSS-SHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred             CceEEEECCChh-hhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEE
Confidence            457889998884 65532  3333221    256666442                          12667889999999


Q ss_pred             EEecCCCC
Q 027064          215 IAAAGQAM  222 (229)
Q Consensus       215 isA~g~p~  222 (229)
                      |.++|.|+
T Consensus        82 vitag~~~   89 (167)
T d1u8xx1          82 MAHIRVGK   89 (167)
T ss_dssp             EECCCTTH
T ss_pred             EECCCcCC
Confidence            99999764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=93.83  E-value=0.027  Score=45.01  Aligned_cols=35  Identities=17%  Similarity=0.229  Sum_probs=31.7

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +.+|+|.|+|.-+|+.++..|+++|++|.++.+..
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~   36 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA   36 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            56899999999999999999999999999997753

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.82  E-value=0.028  Score=42.60  Aligned_cols=53  Identities=25%  Similarity=0.369  Sum_probs=38.3

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC-C---------------CHHhhhccCcEEEEecC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT-T---------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t-~---------------~l~~~~~~aDivisA~g  219 (229)
                      |-+|.|||+++.||.-+..+|.+++.   .+..+.+.. .               .......+.|+++.+++
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~   72 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAG   72 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTTTTTCSEEEECSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhhhhhhhhhhhccC
Confidence            67999999999999999999998853   455454421 1               12244567788888876

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.81  E-value=0.026  Score=43.73  Aligned_cols=31  Identities=26%  Similarity=0.318  Sum_probs=28.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+|||+|.. |-..|..|+++|..|+++.+.
T Consensus         2 ~V~IIGaG~a-GL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGIS-GLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECCBHH-HHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECCCHH-HHHHHHHHHhCCCCEEEEecC
Confidence            6999999997 999999999999999999764

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=93.76  E-value=0.031  Score=44.58  Aligned_cols=53  Identities=19%  Similarity=0.340  Sum_probs=38.9

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---C------HHhhhcc--CcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---D------PESIVRE--ADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---~------l~~~~~~--aDivisA~g~p  221 (229)
                      +|+|.|+++.||+.++..|.++|..|.++.+...   |      +.+.++.  .|+||.+.|..
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~   65 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHT   65 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEECCCccccCcCCCHHHHHHHHHHcCCCEEEEecccc
Confidence            6999999999999999999999876665544321   2      2244543  49999987754

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.75  E-value=0.059  Score=40.75  Aligned_cols=52  Identities=15%  Similarity=0.307  Sum_probs=35.5

Q ss_pred             CeEEEEccchhhhHHHHHHHh-hCC---CEEEEEcCCC-C--------------CH--HhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLL-KAD---ATVTIVHSHT-T--------------DP--ESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~-~~~---atVtv~~~~t-~--------------~l--~~~~~~aDivisA~g  219 (229)
                      |+|.|||+++.||+-+..+|+ +++   .+++...|.+ .              ++  .+.....|++|+|+|
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~~~~~DivF~a~~   74 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKALDIIVTCQG   74 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHHHTCSEEEECSC
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhhhhcCcEEEEecC
Confidence            689999999999998886554 432   2555454422 1              01  134678999999987

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.74  E-value=0.056  Score=44.90  Aligned_cols=32  Identities=16%  Similarity=0.284  Sum_probs=29.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      |-|+|.|+++.+|.-++..|+++|++|+.+.+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence            67899999999999999999999999998843

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.69  E-value=0.05  Score=42.65  Aligned_cols=68  Identities=24%  Similarity=0.204  Sum_probs=45.0

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC-------------------CCCHHhh--
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH-------------------TTDPESI--  207 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~-------------------t~~l~~~--  207 (229)
                      |++..   ++..++. .|..|+|+|+|. ||...+.++...|+ .|+++.+.                   ..++.+.  
T Consensus        13 ta~~a---~~~a~v~-~G~tVlV~GaG~-vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~i~   87 (195)
T d1kola2          13 TGYHG---AVTAGVG-PGSTVYVAGAGP-VGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIA   87 (195)
T ss_dssp             HHHHH---HHHTTCC-TTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHH
T ss_pred             HHHHH---HHHhCCC-CCCEEEEECcCH-HHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCcCHHHHHH
Confidence            44544   4444543 699999999987 59888888888888 56666432                   1122222  


Q ss_pred             --hc--cCcEEEEecCCCC
Q 027064          208 --VR--EADIVIAAAGQAM  222 (229)
Q Consensus       208 --~~--~aDivisA~g~p~  222 (229)
                        +.  .+|++|.++|.+.
T Consensus        88 ~~t~g~g~D~vid~vG~~~  106 (195)
T d1kola2          88 ALLGEPEVDCAVDAVGFEA  106 (195)
T ss_dssp             HHHSSSCEEEEEECCCTTC
T ss_pred             HHhCCCCcEEEEECccccc
Confidence              22  3799999999653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.61  E-value=0.015  Score=47.21  Aligned_cols=37  Identities=14%  Similarity=0.163  Sum_probs=32.1

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhh---CCCEEEEEcCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLK---ADATVTIVHSH  200 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~---~~atVtv~~~~  200 (229)
                      .|+||.++|-|+|.=+|+.+|..|++   +|++|.++.+.
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~   42 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS   42 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECC
Confidence            47899999999988889999999975   79999998664

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=93.59  E-value=0.028  Score=43.58  Aligned_cols=36  Identities=28%  Similarity=0.444  Sum_probs=30.6

Q ss_pred             CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+++||+|+|||.|.. |-=++..|...++.++.+.+
T Consensus        28 ~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~   63 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQR   63 (235)
T ss_dssp             CCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEES
T ss_pred             CCCCCCEEEEECCCcc-HHHHHHHHHhhhcccccccc
Confidence            4689999999999998 99999999998886655543

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=93.55  E-value=0.048  Score=39.87  Aligned_cols=37  Identities=19%  Similarity=0.401  Sum_probs=32.5

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      .+||+|+|||.|.. +---|.+|.+-..+|+++|++..
T Consensus        25 ~~~k~V~VvGgGds-A~e~A~~L~~~a~~V~li~r~~~   61 (126)
T d1trba2          25 YRNQKVAVIGGGNT-AVEEALYLSNIASEVHLIHRRDG   61 (126)
T ss_dssp             GTTSEEEEECSSHH-HHHHHHHHTTTSSEEEEECSSSS
T ss_pred             hCCCEEEEECCCHH-HHHHHHHHhhcCCcEEEEeeccc
Confidence            48999999999997 88889999887779999999763

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=93.51  E-value=0.07  Score=41.44  Aligned_cols=53  Identities=17%  Similarity=0.264  Sum_probs=38.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC---C-------------------HHhhhccCcEEEEecCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT---D-------------------PESIVREADIVIAAAGQ  220 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~---~-------------------l~~~~~~aDivisA~g~  220 (229)
                      -||.|+|+++.||.-+.++|.++- ..++...|.+.   .                   ..+...++|+++.|++.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~   81 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPH   81 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSS
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeecccc
Confidence            479999999999999999999873 36555544321   1                   11335789999999864

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=93.50  E-value=0.08  Score=40.14  Aligned_cols=51  Identities=20%  Similarity=0.268  Sum_probs=35.9

Q ss_pred             eEEEEccchhhhHHHHHHHhhC-C---CEEEEEcCCCC-----------------CHHhhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKA-D---ATVTIVHSHTT-----------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~-~---atVtv~~~~t~-----------------~l~~~~~~aDivisA~g  219 (229)
                      ||.|||+++.||.-+..+|+++ +   ..+....+.+.                 .-.+..+++|+++.|++
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~~~~~~~DvvF~alp   73 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQLDAVITCQG   73 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCHHHHTTCSEEEECSC
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccchhhhccccEEEEecC
Confidence            6999999999999999877643 2   45554433211                 11245789999999987

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=93.48  E-value=0.093  Score=40.25  Aligned_cols=35  Identities=23%  Similarity=0.260  Sum_probs=29.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      -.|.+|+|+|.|. ||-..++.+...|| .|+++.+.
T Consensus        27 ~~G~~VlV~G~G~-iGl~a~~~ak~~Ga~~Vi~~d~~   62 (174)
T d1e3ia2          27 TPGSTCAVFGLGC-VGLSAIIGCKIAGASRIIAIDIN   62 (174)
T ss_dssp             CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSC
T ss_pred             CCCCEEEEECCCh-HHHHHHHHHHHhCCceeeeeccc
Confidence            4799999999988 59999999999999 57777553

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.32  E-value=0.089  Score=39.74  Aligned_cols=54  Identities=20%  Similarity=0.304  Sum_probs=43.0

Q ss_pred             CCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064          165 IKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       165 l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA~  218 (229)
                      |+|++++.||-. .-|-..+..++..-|+.+++|.-.+                         .++.+.++.||+|.+-.
T Consensus         1 l~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ai~~aDviyt~~   80 (161)
T d1vlva2           1 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV   80 (161)
T ss_dssp             STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred             CCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecchhhhhhhhHHHHHHHHHhhcCCceEEEecHHHhhhhhhheeccc
Confidence            589999999943 3479999999999999999986532                         25668899999998643

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.26  E-value=0.065  Score=40.55  Aligned_cols=36  Identities=17%  Similarity=0.226  Sum_probs=31.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT  201 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t  201 (229)
                      -.+++|+|||.|.+ |-=.|..|.+.|| +|++.+++.
T Consensus        43 ~~~~kVvVIGGGdt-A~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDT-AFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHH-HHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChh-HHHHHHHHHHcCCcceeEEEeCC
Confidence            45789999999996 9999999999998 688888765

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.24  E-value=0.078  Score=41.30  Aligned_cols=32  Identities=31%  Similarity=0.389  Sum_probs=27.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhh--CCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLK--ADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~--~~atVtv~~~~  200 (229)
                      .+|+|||+|.. |-..|..|.+  .|+.|++..+.
T Consensus         2 ~kv~iIGaGpa-Gl~aA~~L~~~~~~~~V~v~e~~   35 (230)
T d1cjca2           2 PQICVVGSGPA-GFYTAQHLLKHHSRAHVDIYEKQ   35 (230)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHHCSSCEEEEECSS
T ss_pred             CeEEEECccHH-HHHHHHHHHhcCCCCeEEEEeCC
Confidence            48999999998 9999998865  47899999664

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=93.24  E-value=0.07  Score=37.95  Aligned_cols=34  Identities=21%  Similarity=0.252  Sum_probs=27.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhh---CCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLK---ADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~---~~atVtv~~~~  200 (229)
                      ..|+++|||.|.+ |--+|..|.+   .|..|++..+.
T Consensus        17 ~p~~v~IiGgG~i-g~E~A~~l~~~~~~g~~Vtli~~~   53 (117)
T d1feca2          17 APKRALCVGGGYI-SIEFAGIFNAYKARGGQVDLAYRG   53 (117)
T ss_dssp             CCSEEEEECSSHH-HHHHHHHHHHHSCTTCEEEEEESS
T ss_pred             cCCeEEEECCChH-HHHHHHHhHhhcccccccceeccc
Confidence            3589999999995 9999987654   48899998764

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.23  E-value=0.056  Score=39.78  Aligned_cols=35  Identities=14%  Similarity=0.176  Sum_probs=28.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHh----hCCCEEEEEcCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLL----KADATVTIVHSHT  201 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~----~~~atVtv~~~~t  201 (229)
                      .+|+++|||.|.+ |--+|..|.    +.|..||+.++..
T Consensus        36 ~~k~i~IvGgG~~-G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          36 EVKSITIIGGGFL-GSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             HCSEEEEECCSHH-HHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCEEEEECCCHH-HHHHHHHHHHHHHhcCCEEEEecccc
Confidence            3689999999996 999988885    4588999987754

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.12  E-value=0.048  Score=41.66  Aligned_cols=53  Identities=21%  Similarity=0.103  Sum_probs=35.2

Q ss_pred             eEEEEccchhhhHHHHHHHh--hC----CCEEEEEcCC-----------------------CCCHHhhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLL--KA----DATVTIVHSH-----------------------TTDPESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~--~~----~atVtv~~~~-----------------------t~~l~~~~~~aDivisA~g  219 (229)
                      |++|||+|. +|.|.+...+  ..    ..++.+.+..                       |.+..+.++.||+||.+.|
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita~   80 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFR   80 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCC
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEecc
Confidence            688888887 4777664322  11    2356665431                       2356688999999999999


Q ss_pred             CCC
Q 027064          220 QAM  222 (229)
Q Consensus       220 ~p~  222 (229)
                      .|+
T Consensus        81 ~~~   83 (162)
T d1up7a1          81 PGG   83 (162)
T ss_dssp             TTH
T ss_pred             cCC
Confidence            874

>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Pyrococcus abyssi [TaxId: 29292]

Probab=93.11  E-value=0.072  Score=40.00  Aligned_cols=54  Identities=15%  Similarity=0.206  Sum_probs=43.4

Q ss_pred             CCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcCCC---------------------CCHHhhhccCcEEEEec
Q 027064          165 IKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHSHT---------------------TDPESIVREADIVIAAA  218 (229)
Q Consensus       165 l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~~t---------------------~~l~~~~~~aDivisA~  218 (229)
                      ++|++|++||-.  .-|.+.++.+|..-|+.+++|...+                     .|+.+.++.||+|.+-.
T Consensus         2 l~gl~i~~vGD~~~srV~~Sli~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~av~~aDvvy~~~   78 (157)
T d1ml4a2           2 IDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTR   78 (157)
T ss_dssp             SSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECC
T ss_pred             cCCCEEEEEcCCccChHHHHHHHHHHhcCCcEEEEccchhhcchHHHHHHHhhcccceeecCHHHhhccCcEEEeec
Confidence            689999999994  3368999999999999998886532                     36678899999887653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.03  E-value=0.042  Score=45.56  Aligned_cols=31  Identities=23%  Similarity=0.381  Sum_probs=29.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVH  198 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~  198 (229)
                      |+|+|.|+++.+|..++..|+++|.+|+.++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            7999999999999999999999999999874

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=92.95  E-value=0.044  Score=43.53  Aligned_cols=31  Identities=29%  Similarity=0.452  Sum_probs=28.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+|||+|.+ |-.+|..|+++|.+|+++.+.
T Consensus         6 DvvIIGaGi~-Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           6 EAVVIGGGII-GSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECcCHH-HHHHHHHHHHCCCcEEEEeCC
Confidence            6999999996 999999999999999999764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.95  E-value=0.04  Score=40.04  Aligned_cols=33  Identities=24%  Similarity=0.302  Sum_probs=29.9

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -++++|||+|-+ |--+|..|.+.|+.||+..+.
T Consensus        20 P~~vvIIGgG~i-G~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGASYV-ALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECCSHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECCCcc-HHHHHHHHhhcCCeEEEEEec
Confidence            479999999996 999999999999999998653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.92  E-value=0.045  Score=45.52  Aligned_cols=35  Identities=17%  Similarity=0.106  Sum_probs=31.6

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      -|+|+|+|+++.+|..++..|+++|.+|++..|..
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~   37 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSL   37 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCc
Confidence            48999999999999999999999999999886643

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.79  E-value=0.11  Score=41.37  Aligned_cols=40  Identities=33%  Similarity=0.434  Sum_probs=33.3

Q ss_pred             CCCCCCCeEEEEccchhhhHHHHHHHhh--------------------CCC-EEEEEcCCCC
Q 027064          162 GVTIKGKRAVVVGRSNIVGLPVSLLLLK--------------------ADA-TVTIVHSHTT  202 (229)
Q Consensus       162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~--------------------~~a-tVtv~~~~t~  202 (229)
                      ..+++||+|+|||.|+ |+.=+|..|++                    .|+ +|+++-++..
T Consensus        34 ~~~~~gk~VvVIGgGN-VAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~   94 (225)
T d1cjca1          34 APDLSCDTAVILGQGN-VALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP   94 (225)
T ss_dssp             CCCTTSSEEEEESCSH-HHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred             CccccCceEEEECCch-hHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcCh
Confidence            3567899999999999 59999998887                    477 7999977653

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=92.75  E-value=0.19  Score=37.62  Aligned_cols=55  Identities=18%  Similarity=0.217  Sum_probs=37.3

Q ss_pred             CcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          145 LFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       145 ~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      ..++|.-...+..+.+..---.|.+|+|+|.|.+ |-..+.++...++ .|+.+.+.
T Consensus         7 a~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~-g~~~~~~~~~~g~~~Vi~~~~~   62 (175)
T d1cdoa2           7 CLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAV-GLAAVMGCHSAGAKRIIAVDLN   62 (175)
T ss_dssp             GGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSC
T ss_pred             HHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCc-cchHHHHHHHHhhchheeecch
Confidence            3567865555555544332347899999999995 7777777777777 57777653

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=92.64  E-value=0.034  Score=42.43  Aligned_cols=34  Identities=12%  Similarity=0.310  Sum_probs=30.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++++|+|||.|.. |...|..|.+.|+.|+++++.
T Consensus         4 k~~dVvIIGGGpa-Gl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPA-GYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHH-HHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECCCHH-HHHHHHHHHHcCCceEEEEee
Confidence            5789999999997 999999999999999998653

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.54  E-value=0.093  Score=39.26  Aligned_cols=52  Identities=23%  Similarity=0.235  Sum_probs=37.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC---CEEEEEcCCCC---------------C-HHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD---ATVTIVHSHTT---------------D-PESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~---atVtv~~~~t~---------------~-l~~~~~~aDivisA~g  219 (229)
                      -+|.|||+++.||+-+..+|.+++   ..+..+-|.+.               + ..+...++|+++.|+|
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~~~~~~d~vf~a~p   73 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAA   73 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCGGGCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhhhhccceEEEecCC
Confidence            479999999999999999997543   35555544321               1 1244678999999986

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.40  E-value=0.063  Score=41.55  Aligned_cols=32  Identities=22%  Similarity=0.216  Sum_probs=27.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC-------CEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD-------ATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~-------atVtv~~~~  200 (229)
                      ++|+|||+|.. |...|..|.++|       +.|++..+.
T Consensus         3 ~~VaVIGaGpa-GL~aA~~L~~~G~~~~~~~~~V~v~E~~   41 (239)
T d1lqta2           3 YYIAIVGSGPS-AFFAAASLLKAADTTEDLDMAVDMLEML   41 (239)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHHHHHHSTTCCEEEEEEESS
T ss_pred             cEEEEECcCHH-HHHHHHHHHHcCCccccCCCceEEEecC
Confidence            58999999998 999999998876       579999653

>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.40  E-value=0.11  Score=40.35  Aligned_cols=55  Identities=24%  Similarity=0.315  Sum_probs=44.4

Q ss_pred             CCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCC-------------------------CCCHHhhhccCcEEEEe
Q 027064          164 TIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSH-------------------------TTDPESIVREADIVIAA  217 (229)
Q Consensus       164 ~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~-------------------------t~~l~~~~~~aDivisA  217 (229)
                      +|+|.+|+.||-+ +-|.+.++.++..-|+.+++|.-.                         +.++.+.++.||+|.+-
T Consensus         2 ~l~~lkia~vGD~~nnV~~Sli~~~~~~G~~l~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvVyt~   81 (185)
T d1dxha2           2 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD   81 (185)
T ss_dssp             CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHHHcCCEEEEEccHHHHhhhHHHHHHHHHhhccCCeEEEEeChhhccccccEEEee
Confidence            5789999999964 458999999999999999998642                         23566889999998765


Q ss_pred             c
Q 027064          218 A  218 (229)
Q Consensus       218 ~  218 (229)
                      +
T Consensus        82 ~   82 (185)
T d1dxha2          82 V   82 (185)
T ss_dssp             C
T ss_pred             h
Confidence            3

>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.35  E-value=0.13  Score=39.15  Aligned_cols=55  Identities=16%  Similarity=0.251  Sum_probs=44.6

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-------------------------CCCHHhhhccCcEEEEec
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-------------------------TTDPESIVREADIVIAAA  218 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-------------------------t~~l~~~~~~aDivisA~  218 (229)
                      +++|++|++||-+.-|-..++.++..-|++++++...                         +.++.+.++.||++...+
T Consensus         1 sl~gl~I~~vGD~~nV~~Sli~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~advi~~~~   80 (170)
T d1otha2           1 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT   80 (170)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred             CCCCCEEEEEcCchhHHHHHHHHHHHcCCEEEEEeccccCCchHHHHHHHHHHhccCCEEEEEcCHHHHHhhhhheeeec
Confidence            4789999999998888888888888889998888653                         235668899999998764

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.34  E-value=0.066  Score=40.06  Aligned_cols=49  Identities=18%  Similarity=0.261  Sum_probs=36.4

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAG  219 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g  219 (229)
                      ||-+||-|.+ |.|+|..|++.|..|. .++...             +..+.+.++|++|....
T Consensus         2 kIg~IGlG~M-G~~ma~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   63 (156)
T d2cvza2           2 KVAFIGLGAM-GYPMAGHLARRFPTLV-WNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLP   63 (156)
T ss_dssp             CEEEECCSTT-HHHHHHHHHTTSCEEE-ECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCS
T ss_pred             eEEEEeHHHH-HHHHHHHHHhCCCEEE-EeCCHHHHHHHHHHcCCcccccccccceeEEEeccc
Confidence            6889999996 9999999999998764 544322             22255678888887654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.33  E-value=0.11  Score=39.87  Aligned_cols=20  Identities=20%  Similarity=0.126  Sum_probs=16.7

Q ss_pred             CHHhhhccCcEEEEecCCCC
Q 027064          203 DPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       203 ~l~~~~~~aDivisA~g~p~  222 (229)
                      |..+.++.||+||+++|.++
T Consensus        70 d~~~al~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          70 DRRRALDGADFVTTQFRVGG   89 (169)
T ss_dssp             CHHHHHTTCSEEEECCCTTH
T ss_pred             CchhhcCCCCEEEEccccCC
Confidence            45577899999999999775

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.33  E-value=0.031  Score=42.70  Aligned_cols=31  Identities=19%  Similarity=0.270  Sum_probs=28.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|-|||-|.+ |.++|..|+++|..|+++++.
T Consensus         3 kIGvIGlG~M-G~~ma~~L~~~G~~V~~~dr~   33 (178)
T d1pgja2           3 DVGVVGLGVM-GANLALNIAEKGFKVAVFNRT   33 (178)
T ss_dssp             SEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEEeehHH-HHHHHHHHHHCCCeEEEEECC
Confidence            6889999996 999999999999999999874

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.33  E-value=0.07  Score=44.21  Aligned_cols=32  Identities=25%  Similarity=0.431  Sum_probs=28.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~  200 (229)
                      |+|+|||+|.. |-.+|..|+++|.  .|++..+.
T Consensus         5 KrVaIIGaG~s-Gl~~A~~L~~~~~~~~v~vfEk~   38 (335)
T d2gv8a1           5 RKIAIIGAGPS-GLVTAKALLAEKAFDQVTLFERR   38 (335)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHTTTCCSEEEEECSS
T ss_pred             CeEEEECcCHH-HHHHHHHHHHhCCCCCEEEEECC
Confidence            89999999997 9999999988764  89998765

>d1mv8a3 c.26.3.1 (A:301-436) GDP-mannose 6-dehydrogenase, GDP-binding domain {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
domain: GDP-mannose 6-dehydrogenase, GDP-binding domain
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.28  E-value=0.25  Score=36.07  Aligned_cols=60  Identities=13%  Similarity=0.313  Sum_probs=47.4

Q ss_pred             CCCCCeEEEEccc---------hhhhHHHHHHHhhCCCEEEEEcCC-------------------------CCCHHhhhc
Q 027064          164 TIKGKRAVVVGRS---------NIVGLPVSLLLLKADATVTIVHSH-------------------------TTDPESIVR  209 (229)
Q Consensus       164 ~l~gk~v~ViG~s---------~~VG~pla~~L~~~~atVtv~~~~-------------------------t~~l~~~~~  209 (229)
                      ++.+|+|.|+|-+         +.-...++..|..+|+.|.+.+..                         ..++.+.++
T Consensus        10 ~~~~kkI~ilGlafK~~t~D~R~Sps~~li~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i~   89 (136)
T d1mv8a3          10 SHDTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVA   89 (136)
T ss_dssp             TSSCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHH
T ss_pred             hcCCCEEEEEEEEECCCCcchhcCHHHHHHHHHhhhhccccccCCCCCHHHHhhhhhhhhhhccccccceeehhhhhhhh
Confidence            4578999999954         223678999999999999988531                         136778899


Q ss_pred             cCcEEEEecCCCCC
Q 027064          210 EADIVIAAAGQAMM  223 (229)
Q Consensus       210 ~aDivisA~g~p~~  223 (229)
                      .||+||.+|..+.|
T Consensus        90 ~~D~ivi~t~h~~f  103 (136)
T d1mv8a3          90 SSDVLVLGNGDELF  103 (136)
T ss_dssp             HCSEEEECSCCGGG
T ss_pred             hceEEEEEeCCHHH
Confidence            99999999998876

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.26  E-value=0.17  Score=39.35  Aligned_cols=51  Identities=24%  Similarity=0.363  Sum_probs=38.2

Q ss_pred             eEEEEccchhhhHHHHHHHhhC-CCEEEEEcCCCC---------------------------------CHHhhhccCcEE
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSHTT---------------------------------DPESIVREADIV  214 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~t~---------------------------------~l~~~~~~aDiv  214 (229)
                      ||.|.|.|.+ ||.++..|.++ +..|.-.+..++                                 ++.+...++|+|
T Consensus         3 KVaINGfGRI-GR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV   81 (178)
T d1b7go1           3 NVAVNGYGTI-GKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV   81 (178)
T ss_dssp             EEEEECCSHH-HHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred             EEEEECCCHH-HHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence            6899999996 99999999875 456655554432                                 233445689999


Q ss_pred             EEecCC
Q 027064          215 IAAAGQ  220 (229)
Q Consensus       215 isA~g~  220 (229)
                      |.+||.
T Consensus        82 iecTG~   87 (178)
T d1b7go1          82 VDTTPN   87 (178)
T ss_dssp             EECCST
T ss_pred             EECCCC
Confidence            999995

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.06  E-value=0.063  Score=44.19  Aligned_cols=32  Identities=16%  Similarity=0.199  Sum_probs=29.3

Q ss_pred             CeE-EEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRA-VVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v-~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      |+| +|.|+++.+|..++..|+++|++|+.+.+
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r   33 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVR   33 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            678 89999999999999999999999988755

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.01  E-value=0.076  Score=41.50  Aligned_cols=32  Identities=28%  Similarity=0.394  Sum_probs=28.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT  201 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t  201 (229)
                      +|+|||+|.. |..+|.+|.+.|. .|+|..+..
T Consensus         3 ~V~IvGaG~a-Gl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIG-GLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHH-HHHHHHHHHhCCCCeEEEEeCCC
Confidence            7999999996 9999999999995 899987753

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.00  E-value=0.11  Score=42.63  Aligned_cols=53  Identities=25%  Similarity=0.357  Sum_probs=40.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC----------------C-------HHhhhccCcEEEEecCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT----------------D-------PESIVREADIVIAAAGQA  221 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~----------------~-------l~~~~~~aDivisA~g~p  221 (229)
                      +|+|.|+++.+|+.++..|+++| .+|+.+++.+.                |       .+...+.+|+||-+++..
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~   78 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA   78 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccc
Confidence            69999999999999999999888 58888754321                1       123677899999877754

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.98  E-value=0.059  Score=43.08  Aligned_cols=31  Identities=26%  Similarity=0.407  Sum_probs=28.2

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +|+|||+|.. |...|..|+++|..|+|+.+.
T Consensus         1 DViVIGaG~a-GL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           1 DVVVVGGGIS-GMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             SEEEECCBHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred             CEEEECCCHH-HHHHHHHHHhCCCCEEEEecC
Confidence            4899999997 999999999999999999653

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.98  E-value=0.055  Score=40.36  Aligned_cols=31  Identities=23%  Similarity=0.237  Sum_probs=26.9

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      ++++|+|||.|.+ |--+|..|.+.|+.|+++
T Consensus         2 ~~~~VvIIGgG~~-G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGTGLA-GVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECCSHH-HHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECCcHH-HHHHHHHHHHcCCceEEE
Confidence            4789999999996 999999999998866554

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.93  E-value=0.1  Score=40.04  Aligned_cols=30  Identities=20%  Similarity=0.315  Sum_probs=25.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhC-CCEEEEE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA-DATVTIV  197 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~-~atVtv~  197 (229)
                      .+|.|+|+++.||.-+..+|.++ ...++-+
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            37999999999999999999987 5565433

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.91  E-value=0.071  Score=44.08  Aligned_cols=34  Identities=24%  Similarity=0.280  Sum_probs=30.9

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .=|+++|.|+++.+|..++..|.++|.+|+.+.+
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            3489999999999999999999999999998854

>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=91.82  E-value=0.16  Score=38.13  Aligned_cols=52  Identities=13%  Similarity=0.265  Sum_probs=39.6

Q ss_pred             CCCCeEEEEccchh--hhHHHHHHHhhCCCEEEE-EcCC------------------CCCHHhhhccCcEEEE
Q 027064          165 IKGKRAVVVGRSNI--VGLPVSLLLLKADATVTI-VHSH------------------TTDPESIVREADIVIA  216 (229)
Q Consensus       165 l~gk~v~ViG~s~~--VG~pla~~L~~~~atVtv-~~~~------------------t~~l~~~~~~aDivis  216 (229)
                      ++|++|++||-..-  |.+.++.+|..-|+++++ |+..                  +.++.+.++.||+|..
T Consensus         1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvvy~   73 (153)
T d1pg5a2           1 IDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYV   73 (153)
T ss_dssp             STTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEE
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHHHcCCeeEEEecccccccchhhcccCCCeEEEEeCHHHHhhcCCeEEE
Confidence            57999999998665  799999999999997554 4321                  1266688999998864

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.78  E-value=0.11  Score=38.18  Aligned_cols=37  Identities=22%  Similarity=0.360  Sum_probs=31.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT  202 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~  202 (229)
                      .+||+|+|||.|.. +---|.+|++--..|+++|+..+
T Consensus        32 frgk~V~VvGgGds-A~e~A~~L~~~a~~V~li~r~~~   68 (130)
T d1vdca2          32 FRNKPLAVIGGGDS-AMEEANFLTKYGSKVYIIHRRDA   68 (130)
T ss_dssp             GTTSEEEEECCSHH-HHHHHHHHTTTSSEEEEECSSSS
T ss_pred             hCCCEEEEEcCchH-HHHHHHHHhCCCCcEEEEEeccc
Confidence            47999999999997 77788888876668999999754

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=91.61  E-value=0.07  Score=42.97  Aligned_cols=33  Identities=15%  Similarity=0.319  Sum_probs=26.3

Q ss_pred             CeE-EEEccchhhhHHHHHHHhhCCCE-------EEEEcCC
Q 027064          168 KRA-VVVGRSNIVGLPVSLLLLKADAT-------VTIVHSH  200 (229)
Q Consensus       168 k~v-~ViG~s~~VG~pla~~L~~~~at-------Vtv~~~~  200 (229)
                      |+| +|-|+|.=+|+.+|..|+++|+.       |.++.+.
T Consensus         1 K~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~   41 (240)
T d2bd0a1           1 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT   41 (240)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCC
Confidence            675 56699888899999999999986       7777653

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.48  E-value=0.099  Score=42.05  Aligned_cols=31  Identities=19%  Similarity=0.204  Sum_probs=25.8

Q ss_pred             EEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ++|-|.|.=+|+.+|..|+++||+|.++.++
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~   35 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR   35 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            4555887767999999999999999987654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=91.32  E-value=0.12  Score=38.22  Aligned_cols=30  Identities=23%  Similarity=0.360  Sum_probs=26.6

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +++|+|.|.. |+.++..|..+|..|++...
T Consensus         5 HiII~G~g~~-g~~l~~~L~~~~~~v~vId~   34 (153)
T d1id1a_           5 HFIVCGHSIL-AINTILQLNQRGQNVTVISN   34 (153)
T ss_dssp             CEEEECCSHH-HHHHHHHHHHTTCCEEEEEC
T ss_pred             EEEEECCCHH-HHHHHHHHHHcCCCEEEEec
Confidence            6999999995 99999999999998888754

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.22  E-value=0.28  Score=35.26  Aligned_cols=52  Identities=17%  Similarity=0.234  Sum_probs=40.0

Q ss_pred             CeEEEEccchh---hhHHHHHHHhhCCCEEEEEcCCCC---------CHHhhhccCcEEEEecC
Q 027064          168 KRAVVVGRSNI---VGLPVSLLLLKADATVTIVHSHTT---------DPESIVREADIVIAAAG  219 (229)
Q Consensus       168 k~v~ViG~s~~---VG~pla~~L~~~~atVtv~~~~t~---------~l~~~~~~aDivisA~g  219 (229)
                      |++.|||+|.-   .|.-+...|++.|++|+-+|.+..         ++.+.-..-|+++.+++
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi~vp   65 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP   65 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEEEeC
Confidence            78999998843   577778888899999999987643         56665566698887765

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.17  E-value=0.49  Score=35.02  Aligned_cols=62  Identities=23%  Similarity=0.147  Sum_probs=46.5

Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEccch---hhhHHHHHHHhhCCCEEEEEcCCCC---------CHHhhhccCcEEEEecC
Q 027064          152 KGCLELLKRSGVTIKGKRAVVVGRSN---IVGLPVSLLLLKADATVTIVHSHTT---------DPESIVREADIVIAAAG  219 (229)
Q Consensus       152 ~av~~lL~~~~~~l~gk~v~ViG~s~---~VG~pla~~L~~~~atVtv~~~~t~---------~l~~~~~~aDivisA~g  219 (229)
                      ..+.++|...      |+|+|||+|.   -.|.-++..|.+.|++|+-+|.+..         ++.+.-..-|+++.+++
T Consensus        10 ~~i~~~L~~~------ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~vp   83 (139)
T d2d59a1          10 EDIREILTRY------KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVK   83 (139)
T ss_dssp             HHHHHHHHHC------CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSC
T ss_pred             HHHHHHHhcC------CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEEeC
Confidence            4455566544      8999999884   4688888999999999999988743         56665556788887765

>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Bacillus subtilis [TaxId: 1423]

Probab=91.05  E-value=0.11  Score=39.20  Aligned_cols=54  Identities=19%  Similarity=0.228  Sum_probs=42.6

Q ss_pred             CCCCeEEEEcc--chhhhHHHHHHHhhCCCEEEEEcCCC-----------CCHHhhhccCcEEEEec
Q 027064          165 IKGKRAVVVGR--SNIVGLPVSLLLLKADATVTIVHSHT-----------TDPESIVREADIVIAAA  218 (229)
Q Consensus       165 l~gk~v~ViG~--s~~VG~pla~~L~~~~atVtv~~~~t-----------~~l~~~~~~aDivisA~  218 (229)
                      ++|.+|++||-  ..-|.+.++.+|..-|+.+++|.-..           .++.+.++.||+|.+-.
T Consensus         1 F~gl~i~~vGD~~~srv~~Sl~~~~~~~g~~~~i~~P~~~~~~~~~~~~~~~~~ea~~~aDviy~~r   67 (151)
T d2at2a2           1 FKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLR   67 (151)
T ss_pred             CCCCEEEEEcCCCCCHHHHHHHHHHHHcCCcccccCCchhhccccceeEEEechhccccCceeeeeE
Confidence            47999999998  33379999999999999988874432           25678899999987653

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=91.04  E-value=0.22  Score=37.88  Aligned_cols=54  Identities=19%  Similarity=0.205  Sum_probs=36.6

Q ss_pred             cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      .+.|.-.-.+.-+-+..---.|..|+|+|.|. ||....+.+...|+ +|+++.+.
T Consensus         7 ~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGg-vGl~a~~~ak~~G~~~Vi~~d~~   61 (174)
T d1p0fa2           7 LIGCGFATGYGAAVNTAKVTPGSTCAVFGLGG-VGFSAIVGCKAAGASRIIGVGTH   61 (174)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSC
T ss_pred             hhhhHHHHHHHHHHHhhCCCCCCEEEEECCCc-hhHHHHHHHHHcCCceeeccCCh
Confidence            44663333333332222234799999999988 59999999999998 67777553

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=90.98  E-value=0.18  Score=38.87  Aligned_cols=52  Identities=25%  Similarity=0.335  Sum_probs=36.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC----------------------------------CHHhhhccCc
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT----------------------------------DPESIVREAD  212 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~----------------------------------~l~~~~~~aD  212 (229)
                      ++|.|-|.|.+ ||.+...|..++ ..|.-.+..++                                  +..+...++|
T Consensus         2 ~~VgINGfGRI-GR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vD   80 (171)
T d1cf2o1           2 KAVAINGYGTV-GKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEAD   80 (171)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCS
T ss_pred             eEEEEEcCcHH-HHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCC
Confidence            57889999986 999999887654 45554444332                                  1224467899


Q ss_pred             EEEEecCC
Q 027064          213 IVIAAAGQ  220 (229)
Q Consensus       213 ivisA~g~  220 (229)
                      +||.+||+
T Consensus        81 vViEcTG~   88 (171)
T d1cf2o1          81 IVIDCTPE   88 (171)
T ss_dssp             EEEECCST
T ss_pred             EEEEccCC
Confidence            99999996

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.81  E-value=0.042  Score=44.85  Aligned_cols=35  Identities=20%  Similarity=0.324  Sum_probs=28.2

Q ss_pred             CCCeEEEE-ccchhhhHHHHHHHhhC-CCEEEEEcCC
Q 027064          166 KGKRAVVV-GRSNIVGLPVSLLLLKA-DATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~Vi-G~s~~VG~pla~~L~~~-~atVtv~~~~  200 (229)
                      +||+|+|| |++.=+|+.+|..|+++ |++|.++.+.
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~   37 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD   37 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECC
Confidence            58999666 66555699999999875 8999998774

>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain
species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

Probab=90.79  E-value=0.63  Score=35.69  Aligned_cols=71  Identities=18%  Similarity=0.159  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCC
Q 027064           22 RSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVM   95 (229)
Q Consensus        22 ~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d   95 (229)
                      .+.++++++.+.++.|++|+..+--+|.|..+. =.+.....++..|+++.+  +..+.+.+++.+...+-+.|
T Consensus        20 ~e~lr~~~~~~~~~~gr~pkVlla~~g~D~Hd~-G~~~va~~l~~~G~eVi~--lg~~~~~e~iv~aa~~~~ad   90 (168)
T d7reqa2          20 VEEARELVEEFEQAEGRRPRILLAKMGQDGHDR-GQKVIATAYADLGFDVDV--GPLFQTPEETARQAVEADVH   90 (168)
T ss_dssp             HHHHHHHHHHHHHHHSSCCEEEEECBTTCCCCH-HHHHHHHHHHHTTCEEEE--CCTTBCHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHHHhhCCCCeEEEEeCCccHHHH-HHHHHHHHHHhCCcceec--CCCcCcHHHHHHHHHccCCC
Confidence            367888888887777999999999999776443 345667899999987655  45668999999999887533

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.71  E-value=0.093  Score=43.24  Aligned_cols=54  Identities=17%  Similarity=0.152  Sum_probs=38.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---CHHhhhccCcEEEEecCCCCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---DPESIVREADIVIAAAGQAMMV  224 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---~l~~~~~~aDivisA~g~p~~i  224 (229)
                      .+++|||+|-. |-.+|..|+++|..|+|..++..   +... .....+.+. ...||++
T Consensus         2 ~dv~IIGaG~s-Gl~~A~~L~~~g~~V~iiEk~~~iGG~~~t-~~~~g~~~~-~~G~h~f   58 (298)
T d1i8ta1           2 YDYIIVGSGLF-GAVCANELKKLNKKVLVIEKRNHIGGNAYT-EDCEGIQIH-KYGAHIF   58 (298)
T ss_dssp             EEEEEECCSHH-HHHHHHHHGGGTCCEEEECSSSSSSGGGCE-EEETTEEEE-TTSCCCE
T ss_pred             ccEEEECCcHH-HHHHHHHHHhCCCcEEEEECCCCcccceEE-eCcCCEEEe-ecCcEEE
Confidence            37899999997 99999999999999999977542   1211 133455554 4556654

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=90.69  E-value=0.15  Score=37.17  Aligned_cols=36  Identities=31%  Similarity=0.431  Sum_probs=30.7

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      .+||+|+|||.|.. +---|.+|.+-...|+++|+..
T Consensus        28 ~~gk~V~VvGgG~s-A~~~A~~L~~~a~~V~li~r~~   63 (126)
T d1fl2a2          28 FKGKRVAVIGGGNS-GVEAAIDLAGIVEHVTLLEFAP   63 (126)
T ss_dssp             GBTCEEEEECCSHH-HHHHHHHHHTTBSEEEEECSSS
T ss_pred             cCCceEEEEeCCHH-HHHHHHhhhccCCceEEEeccc
Confidence            57999999999997 7777888887766899999875

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.60  E-value=0.078  Score=42.47  Aligned_cols=32  Identities=28%  Similarity=0.416  Sum_probs=29.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      +|+|||+|. +|..+|..|.+.|..|++..+..
T Consensus         4 ~V~IvGaGp-~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGP-SGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECCSH-HHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECcCH-HHHHHHHHHHHCCCCEEEEeCCC
Confidence            799999998 59999999999999999997653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=90.55  E-value=0.076  Score=42.56  Aligned_cols=37  Identities=27%  Similarity=0.441  Sum_probs=32.4

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT  202 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~  202 (229)
                      |+.++|+|||.|++ |-+++..|...|. ++++++...-
T Consensus        28 L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD~D~V   65 (247)
T d1jw9b_          28 LKDSRVLIVGLGGL-GCAASQYLASAGVGNLTLLDFDTV   65 (247)
T ss_dssp             HHHCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECCCBC
T ss_pred             HhCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEECCccc
Confidence            57899999999995 9999999999998 8999876543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.52  E-value=0.13  Score=41.01  Aligned_cols=32  Identities=22%  Similarity=0.389  Sum_probs=29.0

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..|+|||+|.+ |-.+|..|+++|.+|++..+.
T Consensus         4 yDvvIIGaGi~-Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           4 FDVIVVGAGSM-GMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             CCEEEECcCHH-HHHHHHHHHHCCCcEEEEeCC
Confidence            46999999996 999999999999999999764

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.45  E-value=0.25  Score=41.53  Aligned_cols=63  Identities=11%  Similarity=0.079  Sum_probs=45.6

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhh-CCC-EEEEEcCCCC------------------CHHhhhccCcEEEEecCCCCC-C
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLK-ADA-TVTIVHSHTT------------------DPESIVREADIVIAAAGQAMM-V  224 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~-~~a-tVtv~~~~t~------------------~l~~~~~~aDivisA~g~p~~-i  224 (229)
                      .-+++.|||.|.. ++.-+..|.. +.. +|.+.+++..                  +..+.+..|||||+||..... +
T Consensus       124 ~~~~l~iiGaG~Q-A~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~a~~~aDiV~taT~s~~P~~  202 (320)
T d1omoa_         124 NSSVFGFIGCGTQ-AYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTPSRKPVV  202 (320)
T ss_dssp             TCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCCCSSCCB
T ss_pred             CccEEEEecCccc-HHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhhhhccccEEEEeccCccccc
Confidence            3478999999985 8877777764 444 6887765421                  334668999999999997766 4


Q ss_pred             CCCCC
Q 027064          225 TMGIL  229 (229)
Q Consensus       225 ~~~~v  229 (229)
                      +.+|+
T Consensus       203 ~~~~l  207 (320)
T d1omoa_         203 KAEWV  207 (320)
T ss_dssp             CGGGC
T ss_pred             chhhc
Confidence            76764

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.16  E-value=0.11  Score=41.80  Aligned_cols=31  Identities=19%  Similarity=0.353  Sum_probs=27.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~  200 (229)
                      +|+|||+|.+ |-.+|..|+++|. +|+++.+.
T Consensus         3 dViIIGaGi~-G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIV-GTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHH-HHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHH-HHHHHHHHHHcCCCcEEEEeCC
Confidence            6999999985 9999999999996 69999764

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.09  E-value=0.31  Score=37.48  Aligned_cols=53  Identities=19%  Similarity=0.275  Sum_probs=36.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCCCC----------------------------------CHHhhhccCc
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSHTT----------------------------------DPESIVREAD  212 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~t~----------------------------------~l~~~~~~aD  212 (229)
                      .||.|.|.|.+ ||.++..|.++ +..+.-.|..++                                  ++.+...++|
T Consensus         3 irIaINGfGRI-GR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD   81 (172)
T d2czca2           3 VKVGVNGYGTI-GKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD   81 (172)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred             EEEEEECCCHH-HHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCC
Confidence            47899999996 99999988765 345443433221                                  2334466899


Q ss_pred             EEEEecCCC
Q 027064          213 IVIAAAGQA  221 (229)
Q Consensus       213 ivisA~g~p  221 (229)
                      +||.+||+-
T Consensus        82 vViEcTG~f   90 (172)
T d2czca2          82 IIVDATPGG   90 (172)
T ss_dssp             EEEECCSTT
T ss_pred             EEEECCCCC
Confidence            999999963

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.92  E-value=0.25  Score=39.65  Aligned_cols=32  Identities=25%  Similarity=0.256  Sum_probs=28.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .++|-|+|.-+|+.+|..|+++||+|.++.+.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~   33 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDES   33 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            57899999989999999999999999988664

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=89.83  E-value=0.071  Score=44.24  Aligned_cols=30  Identities=17%  Similarity=0.339  Sum_probs=26.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      |+|+|.|+++.||.-++..|+++|..|.++
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~   32 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVT   32 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEE
Confidence            799999999999999999999998865444

>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Escherichia coli [TaxId: 562]

Probab=89.70  E-value=0.23  Score=38.18  Aligned_cols=55  Identities=18%  Similarity=0.178  Sum_probs=42.5

Q ss_pred             CCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCC-------------------------CCCHHhhhccCcEEEEe
Q 027064          164 TIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSH-------------------------TTDPESIVREADIVIAA  217 (229)
Q Consensus       164 ~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~-------------------------t~~l~~~~~~aDivisA  217 (229)
                      ++.|.+++.||-+ ..|...++.++..-|+++++|.-.                         +.++.+.++.||+|.+-
T Consensus         2 ~~~~l~i~~vGD~~nnv~~Sli~~~~~~g~~l~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~   81 (183)
T d1duvg2           2 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD   81 (183)
T ss_dssp             CGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred             CcCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEEechHhhhhHHHHHHHHHHHHhcCCceEEEechhhccccCCEEEEE
Confidence            4678899999954 457899998888889999888543                         23566789999998765


Q ss_pred             c
Q 027064          218 A  218 (229)
Q Consensus       218 ~  218 (229)
                      +
T Consensus        82 ~   82 (183)
T d1duvg2          82 V   82 (183)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.56  E-value=0.12  Score=39.34  Aligned_cols=32  Identities=13%  Similarity=0.243  Sum_probs=29.1

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .++|+|||.|.. |-..|..|.+.|+.|.++..
T Consensus         5 ~~~VvIIGgGpa-Gl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           5 NTRLCIVGSGPA-AHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             EEEEEEECCSHH-HHHHHHHHHHTTCCCEEECC
T ss_pred             cceEEEECCCHH-HHHHHHHHHHcCCcEEEEEe
Confidence            589999999996 99999999999999998864

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=89.54  E-value=0.15  Score=39.16  Aligned_cols=54  Identities=20%  Similarity=0.293  Sum_probs=36.1

Q ss_pred             CeEEEEccchhhhHHHHH---HHhhC---CCEEEEEcCCC--------------------------CCHHhhhccCcEEE
Q 027064          168 KRAVVVGRSNIVGLPVSL---LLLKA---DATVTIVHSHT--------------------------TDPESIVREADIVI  215 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~---~L~~~---~atVtv~~~~t--------------------------~~l~~~~~~aDivi  215 (229)
                      -|++|||+|.+ |-+.+.   +++..   +-++...+...                          .|+.+.++.||+||
T Consensus         3 mKI~iIGaGsv-g~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv   81 (171)
T d1obba1           3 VKIGIIGAGSA-VFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI   81 (171)
T ss_dssp             CEEEEETTTCH-HHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred             cEEEEECCCHH-HhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEe
Confidence            48899998874 755332   33322   23677765521                          26678899999999


Q ss_pred             EecCCCC
Q 027064          216 AAAGQAM  222 (229)
Q Consensus       216 sA~g~p~  222 (229)
                      ++++.++
T Consensus        82 ~~~~~g~   88 (171)
T d1obba1          82 NTAMVGG   88 (171)
T ss_dssp             ECCCTTH
T ss_pred             eeccccc
Confidence            9988765

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=89.51  E-value=0.41  Score=38.66  Aligned_cols=54  Identities=22%  Similarity=0.252  Sum_probs=42.1

Q ss_pred             CCC-CeEEEEccchhhhHHHHHHHhh------CCCEEEEEcCC-CC------------------CHHhhhccCcEEEEec
Q 027064          165 IKG-KRAVVVGRSNIVGLPVSLLLLK------ADATVTIVHSH-TT------------------DPESIVREADIVIAAA  218 (229)
Q Consensus       165 l~g-k~v~ViG~s~~VG~pla~~L~~------~~atVtv~~~~-t~------------------~l~~~~~~aDivisA~  218 (229)
                      ++| |+|.|||.|.- |+.=|+.|..      .|..|++--+. ++                  +..+.++.||||.-.+
T Consensus        41 ~kg~KkIaViGYGsQ-G~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~EAv~~ADiVmiLl  119 (226)
T d1qmga2          41 FKGIKQIGVIGWGSQ-APAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLI  119 (226)
T ss_dssp             TTTCSEEEEECCSSH-HHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHHHHHTCSEEEECS
T ss_pred             hcCCCEEEEEEeccH-HHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHHHHhhCCEEEEec
Confidence            578 99999999996 9999999998      45678886443 22                  2447788999998766


Q ss_pred             C
Q 027064          219 G  219 (229)
Q Consensus       219 g  219 (229)
                      +
T Consensus       120 P  120 (226)
T d1qmga2         120 S  120 (226)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.30  E-value=0.22  Score=36.66  Aligned_cols=46  Identities=26%  Similarity=0.272  Sum_probs=34.5

Q ss_pred             CHHHHHHHHHHhCCCCCCCeEEEE--ccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          150 TPKGCLELLKRSGVTIKGKRAVVV--GRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       150 Ta~av~~lL~~~~~~l~gk~v~Vi--G~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      |+.-++.+     -..-++.++|+  |.|- +|--+|..|.++|+.||++.+..
T Consensus        27 t~~d~l~~-----~~~~~~~vvi~d~ggg~-ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          27 TPEQVMDG-----KKKIGKRVVILNADTYF-MAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CHHHHHHT-----CSCCCSEEEEEECCCSS-HHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CHHHHhcC-----ccccCCceEEEecCCCh-HHHHHHHHHHHcCCeEEEEecCC
Confidence            66554332     23457888887  6666 59999999999999999997753

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.27  E-value=0.16  Score=39.60  Aligned_cols=32  Identities=19%  Similarity=0.272  Sum_probs=28.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+|+|||+|.. |-.+|..|.++|.+|+++.+.
T Consensus         3 yDViIIGaG~a-Gl~aA~~la~~G~~V~liEk~   34 (251)
T d2i0za1           3 YDVIVIGGGPS-GLMAAIGAAEEGANVLLLDKG   34 (251)
T ss_dssp             CSEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             CCEEEECcCHH-HHHHHHHHHHCCCcEEEEeCC
Confidence            36899999996 999999999999999999764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=89.09  E-value=0.18  Score=40.28  Aligned_cols=34  Identities=21%  Similarity=0.255  Sum_probs=28.8

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHS  199 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~  199 (229)
                      +.|.|+|-|+|.=+|+.+|..|+++|+  .|..+.+
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R   37 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR   37 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeC
Confidence            469999999999999999999999998  4665544

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=89.05  E-value=0.23  Score=39.85  Aligned_cols=31  Identities=32%  Similarity=0.331  Sum_probs=26.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      -|+|-|+|.-+|+.++..|+++||+|.++.+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~   33 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYA   33 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            4677899888899999999999999988643

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.03  E-value=0.1  Score=41.40  Aligned_cols=33  Identities=21%  Similarity=0.360  Sum_probs=29.2

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      .++|-|+|.-+|+.+|..|+++||+|.++.++.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~   35 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHS   35 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            368889998889999999999999999998763

>d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Escherichia coli [TaxId: 562]

Probab=88.67  E-value=0.39  Score=35.92  Aligned_cols=54  Identities=17%  Similarity=0.238  Sum_probs=39.9

Q ss_pred             CCCCeEEEEccchh--hhHHHHHHHhhCCC-EEEEEcCC---------------------CCCHHhhhccCcEEEEec
Q 027064          165 IKGKRAVVVGRSNI--VGLPVSLLLLKADA-TVTIVHSH---------------------TTDPESIVREADIVIAAA  218 (229)
Q Consensus       165 l~gk~v~ViG~s~~--VG~pla~~L~~~~a-tVtv~~~~---------------------t~~l~~~~~~aDivisA~  218 (229)
                      ++|.+|+.||-+.-  |.+.+..+|..-|. .+++|...                     +.++.+.+++||+|.+..
T Consensus         2 l~gl~i~~vGD~~nsrv~~Sli~~l~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~   79 (160)
T d1ekxa2           2 LDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTR   79 (160)
T ss_dssp             SSSCEEEEESCTTTCHHHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCSTTTGGGCSEEEECC
T ss_pred             CCCCEEEEEcCCCccHHHHHHHHHHHHcCCCeEEeeccchhhhhHHHHHHHhhhccccccccCHHHHhCcCceEEeec
Confidence            67899999998654  68888888887764 56666432                     236678899999988653

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=88.64  E-value=0.19  Score=39.78  Aligned_cols=33  Identities=21%  Similarity=0.355  Sum_probs=29.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT  201 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t  201 (229)
                      .+|+|||+|.. |..+|..|.++|.+|+++.+..
T Consensus         5 ~DViIIGaG~a-Gl~aA~~la~~G~~V~vlEk~~   37 (253)
T d2gqfa1           5 SENIIIGAGAA-GLFCAAQLAKLGKSVTVFDNGK   37 (253)
T ss_dssp             CSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSS
T ss_pred             CcEEEECcCHH-HHHHHHHHHHCCCcEEEEecCC
Confidence            47999999997 9999999999999999997653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.53  E-value=0.12  Score=42.48  Aligned_cols=30  Identities=23%  Similarity=0.336  Sum_probs=24.6

Q ss_pred             CeEEEE-ccchhhhHHHHHHHhhCCCEEEEE
Q 027064          168 KRAVVV-GRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       168 k~v~Vi-G~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      |+|++| |+|.=+|+.+|..|+++||+|..+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v   32 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKV   32 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEE
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEE
Confidence            667665 988888999999999999975544

>d1dlja3 c.26.3.1 (A:295-402) UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.30  E-value=0.96  Score=31.73  Aligned_cols=70  Identities=19%  Similarity=0.141  Sum_probs=49.5

Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEccc---------hhhhHHHHHHHhhCCCEEEEEcCCC------------CCHHhhhcc
Q 027064          152 KGCLELLKRSGVTIKGKRAVVVGRS---------NIVGLPVSLLLLKADATVTIVHSHT------------TDPESIVRE  210 (229)
Q Consensus       152 ~av~~lL~~~~~~l~gk~v~ViG~s---------~~VG~pla~~L~~~~atVtv~~~~t------------~~l~~~~~~  210 (229)
                      .-++++|+....+  .|+|.|.|-+         +.-...+...|.+.|+.|.+++-.-            .++.+.+..
T Consensus         2 k~ii~~l~~~~~~--~k~I~ilGl~fK~n~dD~R~Sp~i~ii~~L~~~g~~v~iyDP~v~~~~~~~~~~~~~~l~~~~~~   79 (108)
T d1dlja3           2 KQIINVLKEQESP--VKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLESEDQSVLVNDLENFKKQ   79 (108)
T ss_dssp             HHHHHHHTTSCCS--SCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCCTTCCSEECCCHHHHHHH
T ss_pred             HHHHHHHHhccCC--CCEEEEEEEEECCCCcchhhhhHHHHHHHHhccccceeeecCCcChhHhccCCEEEeCHHHHHhh
Confidence            3466677665433  4789999943         2235778889999999999885421            267788999


Q ss_pred             CcEEEEecCCCCC
Q 027064          211 ADIVIAAAGQAMM  223 (229)
Q Consensus       211 aDivisA~g~p~~  223 (229)
                      +|+||..+....|
T Consensus        80 sDiII~~~~~~~~   92 (108)
T d1dlja3          80 ANIIVTNRYDNEL   92 (108)
T ss_dssp             CSEEECSSCCGGG
T ss_pred             CCEEEEcCCchHH
Confidence            9999877665544

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=88.28  E-value=0.24  Score=36.72  Aligned_cols=31  Identities=10%  Similarity=0.228  Sum_probs=28.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+|+|||.|.+ |-..|..+.+.|.+|++.++
T Consensus         2 yDViIIGgGpa-Gl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           2 YDVLIVGSGPA-GAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHTTTCCEEEECS
T ss_pred             CcEEEECcCHH-HHHHHHHHHHcCCeEEEEEE
Confidence            37999999997 99999999999999999975

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.24  E-value=0.58  Score=34.05  Aligned_cols=55  Identities=24%  Similarity=0.227  Sum_probs=41.7

Q ss_pred             CCCCeEEEEccc---hhhhHHHHHHHhhCC-CEEEEEcCCCC---------CHHhhhccCcEEEEecC
Q 027064          165 IKGKRAVVVGRS---NIVGLPVSLLLLKAD-ATVTIVHSHTT---------DPESIVREADIVIAAAG  219 (229)
Q Consensus       165 l~gk~v~ViG~s---~~VG~pla~~L~~~~-atVtv~~~~t~---------~l~~~~~~aDivisA~g  219 (229)
                      ++=|+|+|||+|   .-.|.-+...|.+.+ ..|+-+|.+-.         ++.++-..-|.++.+++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~vp   73 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVP   73 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSC
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEEecC
Confidence            456999999998   556777888887766 48999988643         56665567799988875

>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Receiver domain of the ethylene receptor
domain: Receiver domain of the ethylene receptor
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.19  E-value=0.35  Score=35.06  Aligned_cols=59  Identities=17%  Similarity=0.211  Sum_probs=42.7

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCC
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAM  222 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~  222 (229)
                      +++|++|+||=-+....+-+..+|...|++|..+.+...-+...-.+-|+|+.-..=|+
T Consensus         4 d~~g~rILvVDD~~~~~~~l~~~L~~~G~~v~~a~~g~eal~~l~~~~dlillD~~mP~   62 (134)
T d1dcfa_           4 NFTGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEHKVVFMDVCMPG   62 (134)
T ss_dssp             CCTTCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHCCTTCSEEEEECCSST
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHhhcCCCeEEEEeccCC
Confidence            57899999999888888888899999999999887643222222234577776655554

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.16  E-value=0.023  Score=43.97  Aligned_cols=25  Identities=36%  Similarity=0.538  Sum_probs=22.4

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEE
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATV  194 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atV  194 (229)
                      +|+|||+|.+ |...|..|+++|.+|
T Consensus         2 kV~VIGaGi~-GlstA~~L~~~G~~v   26 (246)
T d1kifa1           2 RVVVIGAGVI-GLSTALCIHERYHSV   26 (246)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHHHTTT
T ss_pred             EEEEECchHH-HHHHHHHHHHCCCCc
Confidence            7999999996 999999999998753

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.95  E-value=0.2  Score=40.47  Aligned_cols=32  Identities=22%  Similarity=0.386  Sum_probs=29.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -.|+|||.|.. |-..|..|.++|++|+++.+.
T Consensus        17 ~DVlVIG~G~a-Gl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          17 VDVVVVGSGGA-GFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             CSEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             CCEEEECcCHH-HHHHHHHHHHCCCcEEEEecC
Confidence            57999999997 999999999999999999764

>d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: Dhaf3308-like
family: Dhaf3308-like
domain: Hypothetical protein Dhaf 3308
species: Desulfitobacterium hafniense [TaxId: 49338]

Probab=87.91  E-value=0.37  Score=39.30  Aligned_cols=48  Identities=31%  Similarity=0.371  Sum_probs=36.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------CHHhhhccCcEEEE
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------DPESIVREADIVIA  216 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------~l~~~~~~aDivis  216 (229)
                      ..+||+|+|||.-     |....|.++++.++++.+..+       .-.+.+.+||+||.
T Consensus       119 ~~~g~kV~vIG~~-----P~v~~l~~~~~~~~VlE~~p~~gd~p~~~~~~lLp~aD~vii  173 (251)
T d2h1qa1         119 EVKGKKVGVVGHF-----PHLESLLEPICDLSILEWSPEEGDYPLPASEFILPECDYVYI  173 (251)
T ss_dssp             TTTTSEEEEESCC-----TTHHHHHTTTSEEEEEESSCCTTCEEGGGHHHHGGGCSEEEE
T ss_pred             ccCCCEEEEEecc-----hhHHHHHhcCCcEEEEeCCCCCCCCCchHHHHhhhcCCEEEE
Confidence            3479999999973     566677888999999987653       24467889998763

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.89  E-value=0.5  Score=33.27  Aligned_cols=35  Identities=20%  Similarity=0.258  Sum_probs=28.3

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhh---CCCEEEEEcCCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLK---ADATVTIVHSHT  201 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~---~~atVtv~~~~t  201 (229)
                      ..|+++|||.|.+ |--+|..|.+   +|..||++++..
T Consensus        19 ~p~~v~ivGgG~i-g~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVGGGFI-SVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEECSSHH-HHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             cCCeEEEECCcHH-HHHHHHHhhhcccCCcEEEEEeccc
Confidence            4689999999995 9999977654   566899998754

>d1f4pa_ c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Flavodoxin
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=87.84  E-value=2.7  Score=30.46  Aligned_cols=112  Identities=13%  Similarity=0.087  Sum_probs=72.0

Q ss_pred             CeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhc
Q 027064           40 PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGE  119 (229)
Q Consensus        40 P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~  119 (229)
                      ||+.|+....-..+...++...+.+++.|+++..+.+++. +..++.         ++.+.+++-.|-            
T Consensus         1 pkv~I~Y~S~tG~te~~A~~i~~~l~~~g~~v~~~~~~~~-~~~~~~---------~~~~~vii~~sT------------   58 (147)
T d1f4pa_           1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASV-EAGGLF---------EGFDLVLLGCST------------   58 (147)
T ss_dssp             CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEGGGC-CSTTTT---------TTCSEEEEEECE------------
T ss_pred             CcEEEEEECCChhHHHHHHHHHHHHHHCCCeEEEEecccc-chhhhh---------cccCeEEEEecc------------
Confidence            8888888777777888999999999999999998877632 111111         112333332220            


Q ss_pred             CCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc-------hhhhHHHHHHHhhCCC
Q 027064          120 ISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS-------NIVGLPVSLLLLKADA  192 (229)
Q Consensus       120 I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s-------~~VG~pla~~L~~~~a  192 (229)
                                         .|+ ...-.|......++-|+.  .+++|+++.|+|-|       .-.++-+...|.+.|+
T Consensus        59 -------------------~g~-g~~~~~~~~~~f~~~l~~--~~l~~~~~avfGlGds~y~~f~~a~~~l~~~l~~lGa  116 (147)
T d1f4pa_          59 -------------------WGD-DSIELQDDFIPLFDSLEE--TGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGA  116 (147)
T ss_dssp             -------------------ECS-SSCEECTTTHHHHHTGGG--SCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTC
T ss_pred             -------------------cCC-cCCChhhhHHHhhhcccc--ccccCCcEEEEecCCccHHHHhHHHHHHHHHHHhCCC
Confidence                               010 011234455555555553  46899999999832       2347889999999999


Q ss_pred             EEE
Q 027064          193 TVT  195 (229)
Q Consensus       193 tVt  195 (229)
                      +..
T Consensus       117 ~~v  119 (147)
T d1f4pa_         117 EIV  119 (147)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            754

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=87.77  E-value=0.39  Score=40.97  Aligned_cols=62  Identities=11%  Similarity=0.238  Sum_probs=39.1

Q ss_pred             CCeEEEEccchhhhHHHHHHHh-hCCC-EEEEEcCCC---------------------CCHHhhhccCcEEEEecCCCC-
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLL-KADA-TVTIVHSHT---------------------TDPESIVREADIVIAAAGQAM-  222 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~-~~~a-tVtv~~~~t---------------------~~l~~~~~~aDivisA~g~p~-  222 (229)
                      -+++.|||.|.. ++.-+..|. -.+. +|.+.++..                     .++++.++.||||+++|..+. 
T Consensus       128 a~~l~iiG~G~Q-A~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s~  206 (340)
T d1x7da_         128 ARKMALIGNGAQ-SEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAY  206 (340)
T ss_dssp             CCEEEEECCSTT-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSE
T ss_pred             CceEEEEcccHH-HHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCCC
Confidence            467777777764 665444443 2333 455554421                     257788999999999987653 


Q ss_pred             --CCCCCCC
Q 027064          223 --MVTMGIL  229 (229)
Q Consensus       223 --~i~~~~v  229 (229)
                        +++.+|+
T Consensus       207 ~Pv~~~~~l  215 (340)
T d1x7da_         207 ATIITPDML  215 (340)
T ss_dssp             EEEECGGGC
T ss_pred             Ccccchhhc
Confidence              5677764

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.61  E-value=0.16  Score=44.64  Aligned_cols=39  Identities=15%  Similarity=0.276  Sum_probs=33.2

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCCCH
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTTDP  204 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~~l  204 (229)
                      |++.+|+|||.|++ |-.+++.|...|. ++++++..+-++
T Consensus        35 l~~~kVlvvG~Ggl-G~ei~k~L~~~Gvg~i~lvD~D~Ve~   74 (426)
T d1yovb1          35 LDTCKVLVIGAGGL-GCELLKNLALSGFRQIHVIDMDTIDV   74 (426)
T ss_dssp             HHHCCEEEECSSTT-HHHHHHHHHTTTCCCEEEECCCBCCG
T ss_pred             HhcCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEECCCcch
Confidence            35679999999995 9999999999998 799998876543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.36  E-value=0.25  Score=40.88  Aligned_cols=35  Identities=20%  Similarity=0.216  Sum_probs=30.9

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+..+|+|||+|.. |..+|..|.++|.+|++..+.
T Consensus         5 ~~~~dV~IIGAG~s-Gl~~a~~L~~~G~~v~i~Ek~   39 (298)
T d1w4xa1           5 PEEVDVLVVGAGFS-GLYALYRLRELGRSVHVIETA   39 (298)
T ss_dssp             CSEEEEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             CCCCCEEEECccHH-HHHHHHHHHhCCCCEEEEEcC
Confidence            35678999999997 999999999999999999664

>d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
species: Thermotoga maritima [TaxId: 2336]

Probab=87.26  E-value=1.7  Score=33.37  Aligned_cols=69  Identities=10%  Similarity=0.161  Sum_probs=53.6

Q ss_pred             CeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCC
Q 027064           40 PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHI  111 (229)
Q Consensus        40 P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i  111 (229)
                      |+.+||. |. .++....+...+.++++||+++........+.+++++.++++.+. ++.-|+.--=.-.|+
T Consensus         1 PkV~Ii~-Gs-~SD~~~~~~a~~~L~~~gi~~~~~v~saHr~p~rl~~~~~~~~~~-~~~viIa~AG~aa~L   69 (169)
T d1o4va_           1 PRVGIIM-GS-DSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEER-GIEVIIAGAGGAAHL   69 (169)
T ss_dssp             CEEEEEE-SC-GGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTT-TCCEEEEEEESSCCH
T ss_pred             CeEEEEE-Cc-HhhHHHHHHHHHHHHHcCCcEEEEEeeeecCHHHHHHHHHHHHhc-CCeEEEEeecCCcCc
Confidence            6666665 43 356667888889999999999999999999999999999999766 466676654444444

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.06  E-value=0.3  Score=35.74  Aligned_cols=47  Identities=15%  Similarity=0.228  Sum_probs=35.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEE-cCCCCCHHhhhccCcEEEEec
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIV-HSHTTDPESIVREADIVIAAA  218 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~-~~~t~~l~~~~~~aDivisA~  218 (229)
                      |+.|+|+++-.|+.++..+.++|..+... ++   +..+.+..+|+||.-+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~---~~~~~~~~~DVvIDFS   49 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDV---NGVEELDSPDVVIDFS   49 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEET---TEEEECSCCSEEEECS
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECC---CcHHHhccCCEEEEec
Confidence            68999986667999999999999876543 32   2334567889988654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.84  E-value=0.31  Score=38.74  Aligned_cols=33  Identities=15%  Similarity=0.218  Sum_probs=28.2

Q ss_pred             CeEEEEccchhhhHHHHHHHh---hCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLL---KADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~---~~~atVtv~~~~  200 (229)
                      |+|+|-|+|.=+|+.+|..|+   ++|++|+++.+.
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~   38 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN   38 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence            789999998888999998885   579999988664

>d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
species: Acetobacter aceti [TaxId: 435]

Probab=86.55  E-value=1.8  Score=32.87  Aligned_cols=70  Identities=10%  Similarity=0.129  Sum_probs=52.9

Q ss_pred             CCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCC
Q 027064           39 VPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHI  111 (229)
Q Consensus        39 ~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i  111 (229)
                      .|+.+||. |.+. +....+.-.+.++++||+++......+-+.+++.+.++.+.++ +++-|+.--=.-.|+
T Consensus         2 ~P~V~Iim-GS~S-D~~v~~~a~~~L~~~gI~~e~~v~SAHR~p~~l~~~~~~~e~~-~~~viIa~AG~aaaL   71 (159)
T d1u11a_           2 APVVGIIM-GSQS-DWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAER-GLNVIIAGAGGAAHL   71 (159)
T ss_dssp             CCSEEEEE-SSGG-GHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTT-TCCEEEEEEESSCCH
T ss_pred             cCeEEEEe-CCHh-hHHHHHHHHHHHHHhCCceEEEEehHhhChHHHHHHHHHHHhc-CCeEEEEEecCCCCC
Confidence            57777765 6443 4557777888999999999999999999999999999997654 566666654433333

>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: ROO-like flavoprotein TM0755, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=86.07  E-value=2.6  Score=30.19  Aligned_cols=116  Identities=9%  Similarity=0.043  Sum_probs=73.4

Q ss_pred             CCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHh
Q 027064           39 VPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLG  118 (229)
Q Consensus        39 ~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~  118 (229)
                      +.+..||....-..+...++...+.+++.|+++..+.+... +..++......+.   +-+++++-.|--.         
T Consensus         3 ~~kv~IiY~S~tGnTe~~A~~i~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~l~---~~d~iiigspt~~---------   69 (148)
T d1vmea1           3 KGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDE-ERPAISEILKDIP---DSEALIFGVSTYE---------   69 (148)
T ss_dssp             TTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSS-CCCCHHHHHHHST---TCSEEEEEECEET---------
T ss_pred             CCEEEEEEECCCcHHHHHHHHHHHHHHhCCCeEEEEecccc-cccchhHhhhhHH---HCCEeEEEecccC---------
Confidence            56888888877777888999999999999999998877643 2233333343332   3456666655210         


Q ss_pred             cCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccch---hhhHHHHHHHhhCCCEEE
Q 027064          119 EISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSN---IVGLPVSLLLLKADATVT  195 (229)
Q Consensus       119 ~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~---~VG~pla~~L~~~~atVt  195 (229)
                                      |.         . |......+.-+..  ..++||.++++|..+   --++.+...|...|++|.
T Consensus        70 ----------------~~---------~-~~~~~~~l~~~~~--~~~~~k~~~~fgs~g~~~~a~~~~~~~l~~~G~~~v  121 (148)
T d1vmea1          70 ----------------AE---------I-HPLMRFTLLEIID--KANYEKPVLVFGVHGWAPSAERTAGELLKETKFRIL  121 (148)
T ss_dssp             ----------------TE---------E-CHHHHHHHHHHHH--HCCCCCEEEEEEECCCCCCC-CCHHHHHHTSSCEEE
T ss_pred             ----------------Cc---------c-CchHHHHHHHHhh--cccCCCEEEEEEcCCCccchHHHHHHHHHHcCCcEE
Confidence                            10         1 1111222333333  357899999998643   125888899999999865

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=86.00  E-value=0.34  Score=39.01  Aligned_cols=32  Identities=28%  Similarity=0.412  Sum_probs=28.1

Q ss_pred             CeEEEEccchhhhHHHHHHHh-----hCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLL-----KADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~-----~~~atVtv~~~~  200 (229)
                      -.|+|||+|-+ |-.+|.+|+     ++|..|++..+.
T Consensus         8 yDV~IvGaG~a-Gl~lA~~La~~~~~~~G~~v~vlEr~   44 (360)
T d1pn0a1           8 CDVLIVGAGPA-GLMAARVLSEYVRQKPDLKVRIIDKR   44 (360)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred             CCEEEECcCHH-HHHHHHHHHhcccccCCCcEEEEcCC
Confidence            57999999995 999999995     579999999775

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.63  E-value=0.44  Score=34.70  Aligned_cols=30  Identities=23%  Similarity=0.382  Sum_probs=25.7

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ||+|||.|.+ |--+|..|. ++..||++++.
T Consensus         2 rVvIIGgG~~-G~e~A~~l~-~~~~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVGNGPG-GFELAKQLS-QTYEVTVIDKE   31 (167)
T ss_dssp             EEEEECCSHH-HHHHHHHHT-TTSEEEEECSS
T ss_pred             eEEEECCcHH-HHHHHHHHH-cCCCEEEEecc
Confidence            7999999996 999999886 47799999753

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=85.61  E-value=0.59  Score=35.07  Aligned_cols=53  Identities=28%  Similarity=0.458  Sum_probs=38.4

Q ss_pred             CeEEEEccchhhhHHHHHHHhhC-CCEE-EEEcCCCC-----------CHHhhhccCcEEEEecCCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKA-DATV-TIVHSHTT-----------DPESIVREADIVIAAAGQA  221 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~-~atV-tv~~~~t~-----------~l~~~~~~aDivisA~g~p  221 (229)
                      -+|.|||.|.+ |+..+..|.+. ++++ .++++...           +......+.|+|+.+|+..
T Consensus         4 irvgiiG~G~i-g~~~~~~l~~~~~~elvav~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           4 IRVAIVGYGNL-GRSVEKLIAKQPDMDLVGIFSRRATLDTKTPVFDVADVDKHADDVDVLFLCMGSA   69 (170)
T ss_dssp             EEEEEECCSHH-HHHHHHHHTTCSSEEEEEEEESSSCCSSSSCEEEGGGGGGTTTTCSEEEECSCTT
T ss_pred             ceEEEECChHH-HHHHHHHHHhCCCcEEEEEEecccccccccccccchhhhhhccccceEEEeCCCc
Confidence            47999999996 99999988865 5554 45554322           3446677889999998743

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=85.48  E-value=0.33  Score=39.41  Aligned_cols=31  Identities=13%  Similarity=0.230  Sum_probs=28.3

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .|+|||.|.. |-..|..|+++|++|+++...
T Consensus         7 DVvVIG~G~A-Gl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           7 DSLVIGGGLA-GLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             SEEEECCSHH-HHHHHHHHHTTTCCEEEECSS
T ss_pred             CEEEECcCHH-HHHHHHHHHHCCCCEEEEecC
Confidence            5999999997 999999999999999999654

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.23  E-value=0.27  Score=36.23  Aligned_cols=29  Identities=17%  Similarity=0.450  Sum_probs=25.5

Q ss_pred             CCCCCeEEEEccchhhhHHHHHHHhhCCCE
Q 027064          164 TIKGKRAVVVGRSNIVGLPVSLLLLKADAT  193 (229)
Q Consensus       164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~at  193 (229)
                      ...||+|+|||.|.+ |--+|..|.+.|+.
T Consensus        26 ~~~gkrVvVIGgG~~-g~d~a~~~~r~G~~   54 (162)
T d1ps9a2          26 APVGNKVAIIGCGGI-GFDTAMYLSQPGES   54 (162)
T ss_dssp             CCCCSEEEEECCHHH-HHHHHHHHTCCSSC
T ss_pred             cccCCceEEEcCchh-HHHHHHHHHHcCCc
Confidence            346999999999995 99999999999874

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.00  E-value=0.39  Score=36.59  Aligned_cols=31  Identities=6%  Similarity=0.086  Sum_probs=28.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ..++|||+|.. |..+|..+.+.|.+|+++.+
T Consensus         3 yDvvVIG~G~a-G~~aA~~a~~~G~kV~iiE~   33 (217)
T d1gesa1           3 YDYIAIGGGSG-GIASINRAAMYGQKCALIEA   33 (217)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHTTTCCEEEEES
T ss_pred             CCEEEECCCHH-HHHHHHHHHHCCCEEEEEec
Confidence            36899999997 99999999999999999865

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=84.94  E-value=0.35  Score=39.42  Aligned_cols=32  Identities=22%  Similarity=0.398  Sum_probs=29.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      -.|+|||.|.. |-..|..|.++|++|.++.+.
T Consensus        24 ~DVvVIG~G~a-Gl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          24 TDVVIIGSGGA-GLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             CSEEEECSSHH-HHHHHHHHHTTTCCEEEECSS
T ss_pred             ceEEEECcCHH-HHHHHHHHHHCCCcEEEEeCC
Confidence            57999999997 999999999999999999653

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.31  E-value=0.45  Score=36.24  Aligned_cols=32  Identities=13%  Similarity=0.223  Sum_probs=29.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..|+|||.|.. |...|..+.+.|.+|++..++
T Consensus         6 yDviVIG~GpA-Gl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           6 HDVVIIGGGPA-GYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred             cCEEEECCCHH-HHHHHHHHHHCCCcEEEEEec
Confidence            47899999998 999999999999999999754

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=84.19  E-value=0.41  Score=34.18  Aligned_cols=27  Identities=22%  Similarity=0.275  Sum_probs=21.1

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      |+++|+|.|.. |+.++..|...+  |.++
T Consensus         1 kHivI~G~g~~-g~~l~~~L~~~~--i~vi   27 (129)
T d2fy8a1           1 RHVVICGWSES-TLECLRELRGSE--VFVL   27 (129)
T ss_dssp             CCEEEESCCHH-HHHHHHTSCGGG--EEEE
T ss_pred             CEEEEECCCHH-HHHHHHHHcCCC--CEEE
Confidence            68999999995 999999986554  4444

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=84.08  E-value=0.3  Score=40.83  Aligned_cols=29  Identities=14%  Similarity=0.350  Sum_probs=26.0

Q ss_pred             eEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKADATVTIV  197 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~  197 (229)
                      +|+|.|+++.+|..++..|+++|..|+++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~   30 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVN   30 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEE
Confidence            79999999999999999999999975544

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=83.38  E-value=2  Score=30.24  Aligned_cols=34  Identities=18%  Similarity=0.306  Sum_probs=29.8

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      .+.+|.|+|.|.. ||.++....+.|..|.++...
T Consensus        10 ~~~kigIlGgGQL-~rMla~aA~~lG~~v~v~d~~   43 (111)
T d1kjqa2          10 AATRVMLLGSGEL-GKEVAIECQRLGVEVIAVDRY   43 (111)
T ss_dssp             TCCEEEEESCSHH-HHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCEEEEEeCCHH-HHHHHHHHHHCCCEEEEEcCC
Confidence            5678999999995 999999999999999888653

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.92  E-value=0.4  Score=39.15  Aligned_cols=34  Identities=32%  Similarity=0.430  Sum_probs=30.0

Q ss_pred             CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      +.-.|+|||.|.. |...|..|.++|++|.++.+.
T Consensus        18 e~~DVvVIGaG~a-Gl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          18 ETTQVLVVGAGSA-GFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEEEEEECCSHH-HHHHHHHHHHHTCCEEEECSS
T ss_pred             CccCEEEECcCHH-HHHHHHHHHHCCCcEEEEeCC
Confidence            3468999999997 999999999999999999653

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.73  E-value=0.65  Score=35.65  Aligned_cols=31  Identities=19%  Similarity=0.241  Sum_probs=28.8

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ..|+|||+|.. |..+|..+++.|.+|.++..
T Consensus         4 YDviVIG~Gpa-Gl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           4 FDLIIIGGGSG-GLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEEEECCSHH-HHHHHHHHGGGCCCEEEECC
T ss_pred             CCEEEECCCHH-HHHHHHHHHHCCCeEEEEec
Confidence            57999999998 99999999999999999974

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.46  E-value=0.43  Score=36.58  Aligned_cols=31  Identities=10%  Similarity=0.163  Sum_probs=28.3

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      .+++|||.|.. |..+|..+.+.|.+|+++.+
T Consensus         6 ~DlvVIG~Gpa-Gl~aA~~aa~~G~~V~liE~   36 (220)
T d1lvla1           6 TTLLIIGGGPG-GYVAAIRAGQLGIPTVLVEG   36 (220)
T ss_dssp             CSEEEECCSHH-HHHHHHHHHHHTCCEEEECS
T ss_pred             cCEEEECCCHH-HHHHHHHHHHCCCcEEEEec
Confidence            57899999986 99999999999999999864

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.44  E-value=0.51  Score=35.66  Aligned_cols=32  Identities=25%  Similarity=0.289  Sum_probs=28.5

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..++|||.|.. |..+|..+.+.|.+|+++.+.
T Consensus         4 ~DviVIG~Gpa-Gl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           4 TETLVVGAGPG-GYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             CSEEEECCSHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred             CCEEEECCCHH-HHHHHHHHHHCCCEEEEEecC
Confidence            47899999997 999999999999999999643

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=82.22  E-value=0.64  Score=37.64  Aligned_cols=31  Identities=26%  Similarity=0.303  Sum_probs=28.7

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      ..++|||.|.. |-.+|..|.+.|.+|.++.+
T Consensus         5 yDviIVGsG~a-G~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           5 YDVVIVGSGPI-GCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHHTTCEEEEECS
T ss_pred             ccEEEECcCHH-HHHHHHHHhhCCCeEEEEec
Confidence            47999999998 99999999999999999965

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=82.21  E-value=0.54  Score=37.55  Aligned_cols=35  Identities=26%  Similarity=0.402  Sum_probs=30.1

Q ss_pred             CCCCeEEEEccchhhhHHHHHHHhh-CCCEEEEEcCC
Q 027064          165 IKGKRAVVVGRSNIVGLPVSLLLLK-ADATVTIVHSH  200 (229)
Q Consensus       165 l~gk~v~ViG~s~~VG~pla~~L~~-~~atVtv~~~~  200 (229)
                      .....|+|||+|-. |..+|..|++ .|.+|++..+.
T Consensus        31 ~~e~DViVIGaGpa-GL~aA~~LA~~~G~~V~vlE~~   66 (278)
T d1rp0a1          31 YAETDVVVVGAGSA-GLSAAYEISKNPNVQVAIIEQS   66 (278)
T ss_dssp             HTEEEEEEECCSHH-HHHHHHHHHTSTTSCEEEEESS
T ss_pred             ccCCCEEEECCCHH-HHHHHHHHHHccCCeEEEEecC
Confidence            35688999999997 9999999976 59999999764

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=82.17  E-value=0.44  Score=36.17  Aligned_cols=32  Identities=13%  Similarity=0.199  Sum_probs=28.9

Q ss_pred             CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ..|+|||.|.. |..+|..+.+.|.+|++..+.
T Consensus         4 yDvvVIGgGpa-Gl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           4 NDVVIIGGGPG-GYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             CCEEEECCSHH-HHHHHHHHHHHTCCEEEEECS
T ss_pred             CCEEEECCCHH-HHHHHHHHHHCCCcEEEEEec
Confidence            57999999997 999999999999999998653

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.05  E-value=0.62  Score=35.89  Aligned_cols=33  Identities=21%  Similarity=0.220  Sum_probs=29.5

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH  200 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~  200 (229)
                      ...|+|||.|.. |...|..|.+.|..|++..+.
T Consensus         6 dyDviIIG~GPa-GlsaA~~aa~~G~~V~viE~~   38 (229)
T d1ojta1           6 EYDVVVLGGGPG-GYSAAFAAADEGLKVAIVERY   38 (229)
T ss_dssp             EEEEEEECCSHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred             ccCEEEECcCHH-HHHHHHHHHHCCCeEEEEecc
Confidence            357999999997 999999999999999999653

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=81.89  E-value=0.84  Score=37.87  Aligned_cols=33  Identities=27%  Similarity=0.396  Sum_probs=28.7

Q ss_pred             CCCeEEEEccchhhhHHHHHHHh-hCCCEEEEEc
Q 027064          166 KGKRAVVVGRSNIVGLPVSLLLL-KADATVTIVH  198 (229)
Q Consensus       166 ~gk~v~ViG~s~~VG~pla~~L~-~~~atVtv~~  198 (229)
                      ++-+|+|.|+++.+|..++..|+ ++|.+|++.+
T Consensus         1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            36789999999999999999887 5799999875

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=81.44  E-value=1.4  Score=32.14  Aligned_cols=53  Identities=17%  Similarity=0.061  Sum_probs=39.9

Q ss_pred             CCeEEEEccchh---hhHHHHHHHhhCCCEEEEEcCCC-----------CCHHhhhccCcEEEEecC
Q 027064          167 GKRAVVVGRSNI---VGLPVSLLLLKADATVTIVHSHT-----------TDPESIVREADIVIAAAG  219 (229)
Q Consensus       167 gk~v~ViG~s~~---VG~pla~~L~~~~atVtv~~~~t-----------~~l~~~~~~aDivisA~g  219 (229)
                      -|++.|||+|.-   .|.-+...|++.|+.+...|-+.           +++.+.-..-|+++.+++
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v~~p   79 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRP   79 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSC
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEEecc
Confidence            489999999854   57778888999999999987642           245555455688888775

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.35  E-value=0.77  Score=38.00  Aligned_cols=33  Identities=15%  Similarity=0.126  Sum_probs=27.5

Q ss_pred             CCeEEEEc--cchhhhHHHHHHHhhCCCEEEEEcC
Q 027064          167 GKRAVVVG--RSNIVGLPVSLLLLKADATVTIVHS  199 (229)
Q Consensus       167 gk~v~ViG--~s~~VG~pla~~L~~~~atVtv~~~  199 (229)
                      +|-++|-|  .|.=+|+.+|..|.++||+|.++.+
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~   36 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIW   36 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeC
Confidence            68899999  4333599999999999999998753

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=81.19  E-value=0.64  Score=35.03  Aligned_cols=31  Identities=26%  Similarity=0.323  Sum_probs=26.1

Q ss_pred             eEEEEccchhhhHHHHHHHhhC--CCEEEEEcCC
Q 027064          169 RAVVVGRSNIVGLPVSLLLLKA--DATVTIVHSH  200 (229)
Q Consensus       169 ~v~ViG~s~~VG~pla~~L~~~--~atVtv~~~~  200 (229)
                      ||+|||+|.+ |--+|..|.+.  +.+|++.++.
T Consensus         2 KVvIIGgG~~-G~e~A~~l~~~~~~~~V~v~~~~   34 (198)
T d1nhpa1           2 KVIVLGSSHG-GYEAVEELLNLHPDAEIQWYEKG   34 (198)
T ss_dssp             EEEEECSSHH-HHHHHHHHHHHCTTSEEEEEESS
T ss_pred             EEEEECCcHH-HHHHHHHHHhcCCCCeEEEEeCC
Confidence            7999999996 99999999876  5589988753

>d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
species: Bacillus anthracis [TaxId: 1392]

Probab=80.86  E-value=3.9  Score=30.78  Aligned_cols=68  Identities=12%  Similarity=0.066  Sum_probs=50.6

Q ss_pred             EEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCC
Q 027064           42 LAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHI  111 (229)
Q Consensus        42 LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i  111 (229)
                      |+.|..|. .++.-+.+.-.+.++++||+++......+-+.+++.+.++++.++ ++.-|+.--=.-.|+
T Consensus         3 ~V~IimGS-~SD~~~~~~a~~~L~~~gi~~~~~v~SAHrtp~rl~~~~~~~~~~-~~~viIa~AG~aa~L   70 (155)
T d1xmpa_           3 LVGVIMGS-TSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARER-GLKVIIAGAGGAAHL   70 (155)
T ss_dssp             SEEEEESS-GGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTT-TCCEEEEEEESSCCH
T ss_pred             EEEEEECc-HhhHHHHHHHHHHHHHcCCcEEEEEechhcChHHHHHHHHHHHhh-cceEEEeecccCCCc
Confidence            34445564 345567778889999999999999999999999999999998554 466666554444443

>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
species: Escherichia coli [TaxId: 562]

Probab=80.72  E-value=4.1  Score=30.85  Aligned_cols=69  Identities=12%  Similarity=0.114  Sum_probs=52.8

Q ss_pred             CeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCC
Q 027064           40 PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHI  111 (229)
Q Consensus        40 P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i  111 (229)
                      |+.+||. |. .++..+.+...+.++++||+++......+-+.+++.+.++++.++ ++.-||.--=.-.|+
T Consensus         2 aKV~IIm-GS-~SD~~~~~~a~~~L~~~gI~~e~~v~SAHRtp~~l~~~~~~~~~~-~~~ViIa~AG~aa~L   70 (163)
T d1qcza_           2 ARVAIVM-GS-KSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEEN-GYQVIIAGAGGAAHL   70 (163)
T ss_dssp             CCEEEEE-SS-GGGHHHHHHHHHHHHHHTCCEEEEECCTTTCHHHHHHHHHHTTTT-TCSEEEEEECSSCCH
T ss_pred             CeEEEEE-Cc-HhhHHHHHHHHHHHHHcCCCeEEEEeccccCHHHHHHHHHHHHHc-CCeEEEEeccCCCcc
Confidence            4555555 64 345567778889999999999999999999999999999998764 567676655544444

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=80.64  E-value=0.7  Score=36.51  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=27.4

Q ss_pred             CCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcC
Q 027064          167 GKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHS  199 (229)
Q Consensus       167 gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~  199 (229)
                      ++.++|.|.+.-+|+.++..|.++|++ |.++-+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R   42 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSR   42 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEES
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            568999998888899999999999994 666644

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=80.55  E-value=0.74  Score=36.03  Aligned_cols=30  Identities=17%  Similarity=0.327  Sum_probs=26.6

Q ss_pred             EEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064          170 AVVVGRSNIVGLPVSLLLLKADA-TVTIVHS  199 (229)
Q Consensus       170 v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~  199 (229)
                      |+|.|+++.+|.-++..|+++|. .|++++.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence            78999999999999999999997 5888753