Citrus Sinensis ID: 027114
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 228 | ||||||
| 224067292 | 228 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.964 | 1e-126 | |
| 255538460 | 228 | protein with unknown function [Ricinus c | 1.0 | 1.0 | 0.964 | 1e-126 | |
| 224136646 | 228 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.960 | 1e-125 | |
| 118482807 | 228 | unknown [Populus trichocarpa] | 1.0 | 1.0 | 0.956 | 1e-125 | |
| 225458469 | 228 | PREDICTED: transmembrane protein 147 [Vi | 0.995 | 0.995 | 0.951 | 1e-123 | |
| 356510328 | 228 | PREDICTED: transmembrane protein 147-lik | 0.995 | 0.995 | 0.947 | 1e-123 | |
| 351721575 | 228 | uncharacterized protein LOC100500074 [Gl | 0.995 | 0.995 | 0.947 | 1e-123 | |
| 357465367 | 228 | Transmembrane protein [Medicago truncatu | 1.0 | 1.0 | 0.938 | 1e-123 | |
| 255639411 | 228 | unknown [Glycine max] | 0.995 | 0.995 | 0.942 | 1e-123 | |
| 388497716 | 228 | unknown [Lotus japonicus] | 0.995 | 0.995 | 0.933 | 1e-123 |
| >gi|224067292|ref|XP_002302451.1| predicted protein [Populus trichocarpa] gi|118482507|gb|ABK93176.1| unknown [Populus trichocarpa] gi|222844177|gb|EEE81724.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/228 (96%), Positives = 226/228 (99%)
Query: 1 MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVS 60
MT+FHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVS
Sbjct: 1 MTLFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVS 60
Query: 61 ETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLA 120
E D+FDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLA
Sbjct: 61 ENDSFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLA 120
Query: 121 PLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIV 180
PLWVG+RGLEFTWDY+LQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIV
Sbjct: 121 PLWVGSRGLEFTWDYILQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIV 180
Query: 181 ATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSACQRPSA 228
ATMPSITSYLRRGLGW FPKVVGFELFTSL+MAFISWQLFSACQRPS+
Sbjct: 181 ATMPSITSYLRRGLGWHFPKVVGFELFTSLMMAFISWQLFSACQRPSS 228
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255538460|ref|XP_002510295.1| protein with unknown function [Ricinus communis] gi|223550996|gb|EEF52482.1| protein with unknown function [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224136646|ref|XP_002326911.1| predicted protein [Populus trichocarpa] gi|222835226|gb|EEE73661.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|118482807|gb|ABK93320.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225458469|ref|XP_002284036.1| PREDICTED: transmembrane protein 147 [Vitis vinifera] gi|302142390|emb|CBI19593.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356510328|ref|XP_003523891.1| PREDICTED: transmembrane protein 147-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|351721575|ref|NP_001236446.1| uncharacterized protein LOC100500074 [Glycine max] gi|255628973|gb|ACU14831.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|357465367|ref|XP_003602965.1| Transmembrane protein [Medicago truncatula] gi|355492013|gb|AES73216.1| Transmembrane protein [Medicago truncatula] gi|388506726|gb|AFK41429.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|255639411|gb|ACU20001.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|388497716|gb|AFK36924.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 228 | ||||||
| TAIR|locus:2015393 | 228 | AT1G47640 "AT1G47640" [Arabido | 0.995 | 0.995 | 0.885 | 2.5e-106 | |
| WB|WBGene00022734 | 225 | ZK418.5 [Caenorhabditis elegan | 0.929 | 0.942 | 0.346 | 1.3e-27 | |
| ZFIN|ZDB-GENE-040718-187 | 225 | tmem147 "transmembrane protein | 0.732 | 0.742 | 0.357 | 9.7e-25 | |
| UNIPROTKB|Q3SZR6 | 224 | TMEM147 "Transmembrane protein | 0.657 | 0.669 | 0.374 | 1.1e-23 | |
| UNIPROTKB|Q9BVK8 | 224 | TMEM147 "Transmembrane protein | 0.657 | 0.669 | 0.374 | 1.1e-23 | |
| MGI|MGI:1915011 | 224 | Tmem147 "transmembrane protein | 0.657 | 0.669 | 0.374 | 1.1e-23 | |
| RGD|1304706 | 224 | Tmem147 "transmembrane protein | 0.657 | 0.669 | 0.374 | 1.1e-23 | |
| FB|FBgn0015338 | 227 | CG5861 [Drosophila melanogaste | 0.723 | 0.726 | 0.385 | 2.9e-23 | |
| GENEDB_PFALCIPARUM|PF10_0070 | 260 | PF10_0070 "hypothetical protei | 0.728 | 0.638 | 0.294 | 3.6e-18 | |
| UNIPROTKB|Q8IJX1 | 260 | PF10_0070 "Conserved Plasmodiu | 0.728 | 0.638 | 0.294 | 3.6e-18 |
| TAIR|locus:2015393 AT1G47640 "AT1G47640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 201/227 (88%), Positives = 213/227 (93%)
Query: 1 MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVS 60
MT+FHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAA+VYL TALVKLVCLATFL+VS
Sbjct: 1 MTLFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAAVVYLATALVKLVCLATFLQVS 60
Query: 61 ETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLA 120
ET+ FDPYQE LKA+IGFIDVAGLY+AL QLTHRNISQNHKFQAVGLGWAFADSVLHRLA
Sbjct: 61 ETEVFDPYQEALKAMIGFIDVAGLYYALAQLTHRNISQNHKFQAVGLGWAFADSVLHRLA 120
Query: 121 PLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIV 180
PLWVGARGLEFTWDY+LQGLEANANLV +ISLAALGSLMWLRKNKPK+LIPIIY CA I+
Sbjct: 121 PLWVGARGLEFTWDYVLQGLEANANLVFTISLAALGSLMWLRKNKPKSLIPIIYTCAVII 180
Query: 181 ATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSACQRPS 227
ATMPSITSYL+R GW FPK+VGFEL TSLVMAFIS QLF CQRPS
Sbjct: 181 ATMPSITSYLKRVNGWHFPKIVGFELATSLVMAFISCQLFILCQRPS 227
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| WB|WBGene00022734 ZK418.5 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040718-187 tmem147 "transmembrane protein 147" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q3SZR6 TMEM147 "Transmembrane protein 147" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9BVK8 TMEM147 "Transmembrane protein 147" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:1915011 Tmem147 "transmembrane protein 147" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1304706 Tmem147 "transmembrane protein 147" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| FB|FBgn0015338 CG5861 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| GENEDB_PFALCIPARUM|PF10_0070 PF10_0070 "hypothetical protein" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8IJX1 PF10_0070 "Conserved Plasmodium membrane protein" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 228 | |||
| pfam09767 | 159 | pfam09767, DUF2053, Predicted membrane protein (DU | 3e-71 |
| >gnl|CDD|220389 pfam09767, DUF2053, Predicted membrane protein (DUF2053) | Back alignment and domain information |
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Score = 214 bits (546), Expect = 3e-71
Identities = 81/161 (50%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 2 TVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSE 61
T+FHF NC L FGP+ + Y A+ LSEY VKAA Y+ T L+KL+ LATF VS+
Sbjct: 1 TLFHFGNCLALAFGPYYIVYKASGLSEYGAFWKCVKAAGGYILTQLLKLLLLATFFPVSD 60
Query: 62 TDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAP 121
+ +FD + E+LK FID+AGLY L+Q + AVGLGWAFA+S++ RL P
Sbjct: 61 SGSFDIFGEILKISADFIDLAGLYLVLSQK-TNAGKGESRILAVGLGWAFAESIMSRLIP 119
Query: 122 LWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLR 162
LWVGARGLEF W Y+L+ +EAN +LV ++ LA L +W R
Sbjct: 120 LWVGARGLEFDWKYILRSIEANLDLVQTLVLACLL-WLWSR 159
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This entry is of the conserved N-terminal 150 residues of proteins conserved from plants to humans. The function is unknown although some annotation suggests it to be a transmembrane protein. Length = 159 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 228 | |||
| KOG3236 | 225 | consensus Predicted membrane protein [Function unk | 100.0 | |
| PF09767 | 159 | DUF2053: Predicted membrane protein (DUF2053); Int | 100.0 |
| >KOG3236 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
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Probab=100.00 E-value=3.7e-79 Score=527.73 Aligned_cols=221 Identities=46% Similarity=0.699 Sum_probs=209.1
Q ss_pred CcchhhHhHHHHhhhceeeeeeccCccccccchhHHHHHHHHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHH
Q 027114 1 MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSETDNFDPYQELLKALIGFID 80 (228)
Q Consensus 1 MT~~HF~NC~aL~f~Py~i~Yk~s~LsEy~~~~~c~~a~~~Yl~TQl~Kml~LATf~P~~~~~~f~~~~e~lk~~v~~iD 80 (228)
||+|||+||++|+|+||+++||+||+|||+++|||+|+++.|++||++||+++|||||+.|++.||+++|++|+++|++|
T Consensus 1 mtlFhf~Ncfal~~~py~~~yk~sglsey~~~wkcv~a~~~yl~tqL~klL~lAtff~~~~s~~f~~~~e~LK~s~di~d 80 (225)
T KOG3236|consen 1 MTLFHFGNCFALAFAPYFITYKYSGLSEYSAFWKCVQAGGGYLFTQLVKMLILATFFPALESGGFDFVPEFLKCSADIAD 80 (225)
T ss_pred CceeeccceeecccCceEEEEeccCccccCcchHHHHHhHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccCCCCCceeEeeehhhhhHHHHHhhhhhhhhccCCccchHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 027114 81 VAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMW 160 (228)
Q Consensus 81 l~Gly~vL~~~~~~~~~~~~ril~~GlGWa~ae~v~trl~plwvgaRg~eF~Wkyi~~slesNi~Lv~~is~a~L~~~mw 160 (228)
++|+++++++.++ |+|+|++++|+||++||++++|+.||||||||+||||+|+|+|+|||.||+|+++++++ .||.
T Consensus 81 l~Gl~li~s~~~~---~~~~k~~~~gLGWafA~sVlhRlipLWVGARG~eFtW~yVl~~LesN~~Lv~~I~la~l-~w~i 156 (225)
T KOG3236|consen 81 LIGLHLIMSRFPG---KGEVKFVVAGLGWAFAESVLHRLIPLWVGARGTEFTWDYVLQSLESNANLVQIISLAAL-GWMI 156 (225)
T ss_pred HhhHHHHHhcCCC---CCceeEEEeechHHHHHHHHHhhhHhhccccCceeEHHHHHHHhccCccHhhhhHHHHH-HHHh
Confidence 9999999999999 46999999999999999999999999999999999999999999999999999999999 8999
Q ss_pred HhcCCCCcchhHHHHHHHHHhhhhhHHHHHHhhc---CCcchhhHHHHHHHHHHHHHHHHHHHH-hcCCCCC
Q 027114 161 LRKNKPKTLIPIIYACAGIVATMPSITSYLRRGL---GWQFPKVVGFELFTSLVMAFISWQLFS-ACQRPSA 228 (228)
Q Consensus 161 ~R~~~~~~~~p~v~~l~~~~~~~~~i~~~~~~~~---~w~~~~~l~~~~~~s~~~~~~tl~~y~-~~~~~~~ 228 (228)
+|+|+++..+|.|..++..++++.++.|...|.. ||. .+++|+++|++||++|+|+|+ .+|||+.
T Consensus 157 tr~d~~~~~~p~Vsli~~~aV~~a~~~~~~~hl~~l~gW~---~v~f~~a~s~vmaf~t~~ly~~l~qr~sl 225 (225)
T KOG3236|consen 157 TRTDLKFLFRPAVSLILACAVFKAFVPETTSHLKSLGGWH---FVAFRAAVSLVMAFITLQLYSALCQRPSL 225 (225)
T ss_pred eeccccccccchhHHHHHHHHHHHHHHHHHHHHHhcccHH---HHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999987777777777776666666666644 888 899999999999999999999 8999974
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| >PF09767 DUF2053: Predicted membrane protein (DUF2053); InterPro: IPR019164 This family of proteins is conserved from plants to humans | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00