Citrus Sinensis ID: 027156

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
Protein Sequence
MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA
Secondary Structure (PSIPRED)
ccccEEEEccccccHHHccccccEEEEHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEEEEccccccccccccEEEEEccccccccccccccccEEEccccccccccccccEEEEEEccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccccHHHHHHHcccEEEEHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHccccHHHHHEEEEEEEEcccccccccccccEEEcccccccHHHHHccccccccccccccccccHccccHHHHHHHHHHHHHHHHccccHHHHHHccccEEEEHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MGLKAALITTNSRLKSFGDKLGFATLQLNELIetsdslsgspIDVVASELLKLLGlqrgkmeevsQFDLVLVHIgagektnddkgkaVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIdekssdlsalfprqsytmkgetprndvrhhcpmlISQWQYAVTRKdmaetfsfkdfkehggyltipadRFLHEVAFKLwkapkyga
Flexible Loop (DISEMBL)
MGLKAALITTNSRLKSFGDKLGFATLQLNELIEtsdslsgspIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAgektnddkgkAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIdekssdlsalfPRQSytmkgetprndvrhHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLwkapkyga
Low Complexity Region (SEG)
MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA
Disordered region (IsUnstruct)
*******ITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISID************************DVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKA*****
Disordered Region (DISOPRED)
***KAALITTNSRLKSFGDKLGFATLQLNELI**************ASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK**********HDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNS******************FPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYG*
Disordered Region (DISEMBL)
MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA
Disordered Region (DISPRO)
*GLKAALITTNSRLKSFGDKLGFATLQLNELIETS***SGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYG*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
225429560	320	PREDICTED: uncharacterized protein LOC10	0.995	0.706	0.660	3e-86
224092198	309	predicted protein [Populus trichocarpa]	1.0	0.734	0.682	1e-85
449494427	315	PREDICTED: uncharacterized LOC101217985	0.995	0.717	0.612	2e-77
449450351	315	PREDICTED: uncharacterized protein LOC10	0.995	0.717	0.612	2e-77
255550804	313	conserved hypothetical protein [Ricinus	1.0	0.725	0.607	3e-75
356564061	308	PREDICTED: uncharacterized protein LOC10	0.947	0.698	0.616	1e-73
255647370	308	unknown [Glycine max]	0.947	0.698	0.612	2e-73
356552344	307	PREDICTED: uncharacterized protein LOC10	0.947	0.700	0.603	2e-71
357437483	306	hypothetical protein MTR_1g016410 [Medic	0.982	0.728	0.585	1e-69
388507454	304	unknown [Lotus japonicus]	0.942	0.703	0.594	1e-65

>gi|225429560|ref|XP_002279873.1| PREDICTED: uncharacterized protein LOC100255893 [Vitis vinifera] gi|296081666|emb|CBI20671.3| unnamed protein product [Vitis vinifera]

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 150/227 (66%), Positives = 186/227 (81%), Gaps = 1/227 (0%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG++AA++  NS L SFG  LGF  +Q +ELI+ +  LS  P+DVVASE LKLLG Q GK
Sbjct: 95  MGMRAAIVANNSSLTSFGGTLGFTVMQTDELIKNNHPLSEPPVDVVASESLKLLGFQEGK 154

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
             E SQFDL+ +HIGAGEK N  + + +A+D+EYIN LV  I+Q A+P +E+GSRLHLS+
Sbjct: 155 TLETSQFDLIFMHIGAGEKANG-QTEIIANDVEYINGLVGRIMQTAEPGSEIGSRLHLSL 213

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
           V+SYG V + D+ +LSVL++ +E +SDLS+L PRQSYTMKG  PR+++RHHCPMLI+QWQ
Sbjct: 214 VMSYGAVSKDDDPSLSVLVTKNENNSDLSSLSPRQSYTMKGGNPRDNIRHHCPMLIAQWQ 273

Query: 181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
           YAVTRKDMA+TFSF+DFKEHGG LTIPADRFLHEVAFKLWKAPKYGA
Sbjct: 274 YAVTRKDMAKTFSFEDFKEHGGNLTIPADRFLHEVAFKLWKAPKYGA 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092198|ref|XP_002309505.1| predicted protein [Populus trichocarpa] gi|222855481|gb|EEE93028.1| predicted protein [Populus trichocarpa]

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/227 (68%), Positives = 175/227 (77%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG+KAA+IT N  LKSFG KLG      N+L     SLSGS  D V  ELLKLLG Q GK
Sbjct: 83  MGMKAAIITNNPGLKSFGGKLGLTVFPFNDLKGNEFSLSGSSTDFVTFELLKLLGFQEGK 142

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
             E SQFDLV VH+GAGE+ N +  K +A D+EYI+ALV  I+++AQP +E+GSRLHLS+
Sbjct: 143 TLETSQFDLVFVHVGAGERVNAEGHKTIAIDVEYIDALVDGIMRIAQPGSEIGSRLHLSL 202

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
           V+SYG V E D  +LS+L S DE    LS LFP QSYTMKGE PRND+R+HCPMLISQWQ
Sbjct: 203 VMSYGYVTEGDGRDLSILTSKDEMDPALSKLFPLQSYTMKGEKPRNDIRYHCPMLISQWQ 262

Query: 181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
           YAVTR DMAETFSFKDFKEHGG L IPADRFLHEVAFKLWKAPKYGA
Sbjct: 263 YAVTRVDMAETFSFKDFKEHGGNLVIPADRFLHEVAFKLWKAPKYGA 309

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449494427|ref|XP_004159543.1| PREDICTED: uncharacterized LOC101217985 [Cucumis sativus]

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 139/227 (61%), Positives = 178/227 (78%), Gaps = 1/227 (0%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG++AAL+T NS ++S G +LG + L+L+EL++  + L   P+D +ASELLK LG Q GK
Sbjct: 90  MGMRAALLTNNSVVQSLGSELGISLLRLDELMQM-NHLGLPPVDFLASELLKRLGFQDGK 148

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           +++ S+FDL+ VHIG G+K N +K +  + +++YI+ALV  ILQ  QP +E+GSRLHLS+
Sbjct: 149 IQDASEFDLLFVHIGVGDKVNGEKDRTASDEMKYIDALVGDILQKTQPGSEIGSRLHLSL 208

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
           ++SYG V E D ++LSVL S   K+SDLS LFPRQSYTM GE  RND+RHH PML +QWQ
Sbjct: 209 LMSYGDVFEDDENSLSVLTSNCGKNSDLSVLFPRQSYTMMGEVQRNDIRHHSPMLAAQWQ 268

Query: 181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
           Y VTRKD AETFSFK+FKEHG  L IPADRF+HEVAFKLWKAPKYGA
Sbjct: 269 YGVTRKDKAETFSFKEFKEHGSNLVIPADRFIHEVAFKLWKAPKYGA 315

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450351|ref|XP_004142926.1| PREDICTED: uncharacterized protein LOC101217985 [Cucumis sativus]

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 139/227 (61%), Positives = 178/227 (78%), Gaps = 1/227 (0%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG++AAL+T NS ++S G +LG + L+L+EL++  + L   P+D +ASELLK LG Q GK
Sbjct: 90  MGMRAALLTNNSVVQSLGSELGISLLRLDELMQM-NHLGLPPVDFLASELLKRLGFQDGK 148

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           +++ S+FDL+ VHIG G+K N +K +  + +++YI+ALV  ILQ  QP +E+GSRLHLS+
Sbjct: 149 IQDASEFDLLFVHIGVGDKVNGEKDRTASDEMKYIDALVGDILQKTQPGSEIGSRLHLSL 208

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
           ++SYG V E D ++LSVL S   K+SDLS LFPRQSYTM GE  RND+RHH PML +QWQ
Sbjct: 209 LMSYGDVFEDDENSLSVLTSNCGKNSDLSVLFPRQSYTMMGEVQRNDIRHHSPMLAAQWQ 268

Query: 181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
           Y VTRKD AETFSFK+FKEHG  L IPADRF+HEVAFKLWKAPKYGA
Sbjct: 269 YGVTRKDKAETFSFKEFKEHGSNLVIPADRFIHEVAFKLWKAPKYGA 315

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550804|ref|XP_002516450.1| conserved hypothetical protein [Ricinus communis] gi|223544270|gb|EEF45791.1| conserved hypothetical protein [Ricinus communis]

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 138/227 (60%), Positives = 169/227 (74%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           M +KAA+IT N  L+SFG KLGF  L    L  T  S   S  + + SELLKLLG Q GK
Sbjct: 87  MEMKAAIITDNPSLQSFGSKLGFTVLSFKCLNGTHKSHYESSFEDLTSELLKLLGFQEGK 146

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
             E SQFDLV++H GA E  N D  +A   D  Y+N++V+  +  A+P +E+GSRLHLS+
Sbjct: 147 TIEASQFDLVILHTGASELLNSDSSEATECDAHYLNSMVKETMYNAKPGSEIGSRLHLSL 206

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
           V+SYG   + D++NLSVL+S DE +SDLS L PRQSYTMKGE  R++VRHHCPMLI+QWQ
Sbjct: 207 VMSYGNASKIDSTNLSVLVSKDEMNSDLSVLVPRQSYTMKGEKLRDNVRHHCPMLIAQWQ 266

Query: 181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
           +AVTRKD AET+S+K+FKEHG  L IPADRF+HEVAFKLWKAPKYGA
Sbjct: 267 HAVTRKDTAETYSYKEFKEHGVNLVIPADRFIHEVAFKLWKAPKYGA 313

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564061|ref|XP_003550275.1| PREDICTED: uncharacterized protein LOC100780200 [Glycine max]

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 140/227 (61%), Positives = 170/227 (74%), Gaps = 12/227 (5%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           +G+KAA++T NS LKSF  KLGF+ L+L+EL+       G   +VVA ELLK LG + GK
Sbjct: 94  IGMKAAILTNNSSLKSFSAKLGFSVLKLDELV------GGGSAEVVALELLKFLGFKEGK 147

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           + +   FDLV  HIGAGE+      K VA D+ Y++ALV  ++  AQP +++ SRLHLSV
Sbjct: 148 VLDSDHFDLVFFHIGAGEQ------KVVAADVGYMDALVGGVMSQAQPGSDISSRLHLSV 201

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
           V+SYG VLEAD+S  SVL  +DEK+S LS L+P QSYTMKG  PR DVRH+ PMLI+QWQ
Sbjct: 202 VMSYGNVLEADDSKFSVLKRVDEKNSHLSMLYPLQSYTMKGGIPRKDVRHYSPMLIAQWQ 261

Query: 181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
            AVTRKD AE FSF+DF EHGG LTIPADRFLHE+AFKLWKAPKYGA
Sbjct: 262 SAVTRKDNAERFSFEDFMEHGGNLTIPADRFLHEIAFKLWKAPKYGA 308

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647370|gb|ACU24151.1| unknown [Glycine max]

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 139/227 (61%), Positives = 170/227 (74%), Gaps = 12/227 (5%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           +G+KAA++T NS LKSF  KLGF+ L+L+EL+       G   +VVA ELLK LG + GK
Sbjct: 94  IGMKAAILTNNSSLKSFSAKLGFSVLKLDELV------GGGSAEVVALELLKFLGFKEGK 147

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           + +   FDLV  HIGAGE+      K VA D+ Y++ALV  ++  AQP +++ SRLHLSV
Sbjct: 148 VLDSDHFDLVFFHIGAGEQ------KVVAADVGYMDALVGGVMSQAQPGSDISSRLHLSV 201

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
           V+SYG VLEAD+   SVL  +DEK+S LS L+P QSYTMKG  PR DVRH+ PMLI+QWQ
Sbjct: 202 VMSYGNVLEADDFKFSVLKRVDEKNSHLSMLYPLQSYTMKGGIPRKDVRHYSPMLIAQWQ 261

Query: 181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
           +AVTRKD AE FSF+DF EHGG LTIPADRFLHE+AFKLWKAPKYGA
Sbjct: 262 FAVTRKDNAERFSFEDFMEHGGNLTIPADRFLHEIAFKLWKAPKYGA 308

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552344|ref|XP_003544528.1| PREDICTED: uncharacterized protein LOC100817041 [Glycine max]

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 137/227 (60%), Positives = 166/227 (73%), Gaps = 12/227 (5%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG+KAA++T NS LKSF  KLGF+ L+L+EL+       G   +VVA ELLKLLG Q GK
Sbjct: 93  MGMKAAILTNNSSLKSFSAKLGFSVLKLDELV------VGGSAEVVALELLKLLGFQEGK 146

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           + +   FDLV  H GAGE+      K VA D+ Y++ALV  ++   QP +++ SRLHLSV
Sbjct: 147 VLDSDHFDLVFFHNGAGEQ------KVVAADMGYMDALVGGVMSQMQPGSDISSRLHLSV 200

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
           V+SYG +LE D+S  SV   +DEK+S LS L+P QSY MKG  PR DVRH+ PMLI+QWQ
Sbjct: 201 VVSYGNILEGDDSKFSVSKRVDEKNSHLSVLYPLQSYAMKGGIPRKDVRHYSPMLIAQWQ 260

Query: 181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
            AVTRKD AE FSF+DF EHGG LTIPADRFLHE+AFKLWKAPKYGA
Sbjct: 261 SAVTRKDNAERFSFEDFMEHGGNLTIPADRFLHEIAFKLWKAPKYGA 307

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437483|ref|XP_003589017.1| hypothetical protein MTR_1g016410 [Medicago truncatula] gi|355478065|gb|AES59268.1| hypothetical protein MTR_1g016410 [Medicago truncatula] gi|388492878|gb|AFK34505.1| unknown [Medicago truncatula]

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 133/227 (58%), Positives = 170/227 (74%), Gaps = 4/227 (1%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG+KAA++T +S LKSF  KLGF+ +QL+ L++   S S    D+VA E+LKLLG Q GK
Sbjct: 84  MGMKAAIMTNHSGLKSFSTKLGFSVVQLDGLVKQHASESQDS-DIVAVEILKLLGFQEGK 142

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           + + SQFDLV +H+GAGEK N  +  A   D+E+++ALV  I++ AQP ++VGSRLHLSV
Sbjct: 143 VLDNSQFDLVFIHVGAGEKDNGSEQNA---DVEFVDALVGAIMRQAQPGSDVGSRLHLSV 199

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
           V+SYG+VLE D S  SV   +DEK S    L+P QSY MKG  PR DVR H PMLI+Q Q
Sbjct: 200 VMSYGKVLEDDESKFSVSKKVDEKDSCFLTLYPLQSYAMKGGVPRKDVRLHSPMLIAQLQ 259

Query: 181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
           +AVTRKD  + F+F+DF ++GG LTIPADRFLHE+AFK+WKAPKYGA
Sbjct: 260 HAVTRKDNVQRFTFQDFMKNGGNLTIPADRFLHEIAFKMWKAPKYGA 306

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507454|gb|AFK41793.1| unknown [Lotus japonicus]

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 135/227 (59%), Positives = 161/227 (70%), Gaps = 13/227 (5%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG+KAA++T +S LKSF  KLGF  LQL+ L +  D+      DVVA ELLKLLG Q GK
Sbjct: 91  MGMKAAILTNHSGLKSFSSKLGFNVLQLDALAKDYDA-GLHENDVVALELLKLLGFQEGK 149

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           +++ + FDLV  HIGAGEK           ++EYINALV  ++  AQP +++ SRLHLS+
Sbjct: 150 VQDSNNFDLVFFHIGAGEK-----------NVEYINALVGGLMNQAQPGSDISSRLHLSL 198

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
           V+SYG+V E D S  SV    DEKS  LS L+P QSY MKG  PR DVR H P+LI+QWQ
Sbjct: 199 VMSYGKVSEDDESKFSVSKRADEKSY-LSLLYPLQSYAMKGGFPRKDVRLHSPLLIAQWQ 257

Query: 181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
            AVT KD AE F F+DF EHGG LTIPADRFLHE+AFKLWKAPKYGA
Sbjct: 258 DAVTHKDNAERFYFQDFMEHGGNLTIPADRFLHEIAFKLWKAPKYGA 304

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
TAIR|locus:2181940	306	AT5G11810 "AT5G11810" [Arabido	0.955	0.709	0.515	7.8e-55

TAIR|locus:2181940 AT5G11810 "AT5G11810" [Arabidopsis thaliana (taxid:3702)]

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 117/227 (51%), Positives = 155/227 (68%)

Query:     1 MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
             MGLKAAL+T +S L SFG  +G   LQL+E+ + SDS    P D  +S+LLKLLG + GK
Sbjct:    90 MGLKAALVTDSSTLTSFGKLIGLDVLQLSEICQESDSF---PSDATSSKLLKLLGFEGGK 146

Query:    61 MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
               +V+ +DLV VH G  E  N        +++  +++L+  I+ MAQP +E+ SRLHLSV
Sbjct:   147 CLDVNLYDLVFVHFGVDEYNN-------GNNMGILDSLIGSIMGMAQPGSEILSRLHLSV 199

Query:   121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQ 180
             VLSYG V + D S   +    ++ +     L PRQSYTM+GE  R+DVRH+CPML++QWQ
Sbjct:   200 VLSYGSVTDKDVSVFPIKTPQEDINPAFIGLVPRQSYTMRGEKTRDDVRHYCPMLVAQWQ 259

Query:   181 YAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA 227
             + VTRKD+ +T SF+  K+  G L IPADRF+HEVAFKLWKAPKYGA
Sbjct:   260 HGVTRKDLVDTLSFEALKKLCGNLVIPADRFIHEVAFKLWKAPKYGA 306


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.376    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      227       227   0.00079  113 3  11 22  0.41    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  169 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.09u 0.08s 19.17t   Elapsed:  00:00:02
  Total cpu time:  19.09u 0.08s 19.17t   Elapsed:  00:00:02
  Start:  Fri May 10 02:11:14 2013   End:  Fri May 10 02:11:16 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0013020201 hypothetical protein (309 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	227
COG3635	408	Predicted phosphoglycerate mutase, AP superfamily	100.0
PRK04024	412	cofactor-independent phosphoglycerate mutase; Prov	100.0
PRK04135	395	cofactor-independent phosphoglycerate mutase; Prov	100.0
PRK04200	395	cofactor-independent phosphoglycerate mutase; Prov	99.97
TIGR00306	396	apgM 2,3-bisphosphoglycerate-independent phosphogl	99.97
TIGR02535	396	hyp_Hser_kinase proposed homoserine kinase. The pr	99.97
PF01676	252	Metalloenzyme: Metalloenzyme superfamily; InterPro	99.78
PRK12383	406	putative mutase; Provisional	99.18
TIGR01696	381	deoB phosphopentomutase. This protein is involved	98.62
PLN02538	558	2,3-bisphosphoglycerate-independent phosphoglycera	98.59
PRK05434	507	phosphoglyceromutase; Provisional	98.31
PRK05362	394	phosphopentomutase; Provisional	98.14
TIGR01307	501	pgm_bpd_ind 2,3-bisphosphoglycerate-independent ph	97.75
cd00016	384	alkPPc Alkaline phosphatase homologues; alkaline p	97.13
COG1015	397	DeoB Phosphopentomutase [Carbohydrate transport an	96.53
KOG4513	531	consensus Phosphoglycerate mutase [Carbohydrate tr	94.42
COG0696	509	GpmI Phosphoglyceromutase [Carbohydrate transport	93.57
PF01663	365	Phosphodiest: Type I phosphodiesterase / nucleotid	91.22

>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.8e-41  Score=310.92  Aligned_cols=162  Identities=18%  Similarity=0.238  Sum_probs=145.5

Q ss_pred             CCceeEEecCchhhhhhhhhcceEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccC
Q 027156            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (227)
Q Consensus         2 glkaA~It~~~llkg~g~~~G~~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~   81 (227)
                      |||||||++++++||+|+++|||||++||+||+.||+    |++++++|+++|          ++|||||||++++|++|
T Consensus       246 glk~a~Ia~~~l~KGlar~~GmDvi~vegatG~~dtn----~~~k~k~a~eal----------~~yDfv~vhik~tDeag  311 (408)
T COG3635         246 GLKGACIAAVPLIKGLARLVGMDVIEVEGATGYIDTN----YRGKAKAAIEAL----------KEYDFVFVHIKATDEAG  311 (408)
T ss_pred             CcceEEEEecHHHHhHHHHhCCceeecccccCccCcc----HHHHHHHHHHHH----------hhCCEEEEEeccCcccc
Confidence            8999999999999999999999999999999999998    999999999999          99999999999999999


Q ss_pred             ccc-chhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcCccCCceeEee
Q 027156           82 DDK-GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMK  160 (227)
Q Consensus        82 h~g-~~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy~~k  160 (227)
                      |+| .++|+++||++|++++++++ +..      ...+++||                +     | |+||+      ++ 
T Consensus       312 HdG~~e~Kv~~IE~iD~~i~pll~-~~~------~~~~i~vt----------------~-----D-HsTPv------~v-  355 (408)
T COG3635         312 HDGDFEGKVRVIEDIDKAIGPLLD-LDL------DEDVIAVT----------------G-----D-HSTPV------SV-  355 (408)
T ss_pred             CCCCHHHhHHHHHHHHHHhhhhhc-ccc------CCcEEEEe----------------C-----C-CCCcc------cc-
Confidence            999 77788899999999999987 221      12455655                2     7 99996      99 


Q ss_pred             CCCCCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHHHHhcC
Q 027156          161 GETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWK  221 (227)
Q Consensus       161 ~~~~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evafkL~k  221 (227)
                          ++|++||||++|  |.. .+|+|.|+.|+|.+|++ |++|+|+|.++|++++.+++|
T Consensus       356 ----k~Hs~dPVPili--~~~-~v~~D~v~~F~E~~~~~-G~Lgri~g~dlm~ill~~~~r  408 (408)
T COG3635         356 ----KDHSGDPVPILI--YGP-YVRRDDVKRFDEFSCAR-GSLGRIRGSDLMPILLDLAGR  408 (408)
T ss_pred             ----cccCCCCccEEE--ecC-CcccCccceecHhhhhc-CCcceeehHHHHHHHHHhhcC
Confidence                566699999999  766 44999999999999777 799999999999999999876

>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional

Probab=100.00  E-value=2.4e-34  Score=271.21  Aligned_cols=169  Identities=21%  Similarity=0.279  Sum_probs=151.2

Q ss_pred             CCceeEEecCchhhhhhhhhcceEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccC
Q 027156            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (227)
Q Consensus         2 glkaA~It~~~llkg~g~~~G~~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~   81 (227)
                      |||||+|+++++++|||+++||+++.+||+||+.||+    |.+++++++++|          ++|||||+|++++|++|
T Consensus       243 gl~ga~is~~~l~kGLa~~~Gm~~~~vpg~tg~~~t~----~~~k~~~~~~~l----------~~~Dfv~vh~~~~D~~G  308 (412)
T PRK04024        243 GLKAACVAGTALIKGIARMVGMDVITVEGATGGKDTN----YMAKAKAAVELL----------KEYDFVLLNIKGTDEAG  308 (412)
T ss_pred             CCceEEEeChHHHHHHHHHcCCceeccCCCcCCCCCC----HHHHHHHHHHHh----------ccCCEEEEeccCcchhh
Confidence            8999999999999999999999999999999999997    999999999999          78999999999999999


Q ss_pred             ccc-chhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcCccCCceeEee
Q 027156           82 DDK-GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMK  160 (227)
Q Consensus        82 h~g-~~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy~~k  160 (227)
                      |.| .++|+++||.+|+.++.+++.++..    .  .+++||                     .| |.||.      ++ 
T Consensus       309 H~gd~~~k~~aiE~iD~~l~~il~~l~~~----~--~~liIT---------------------aD-Hgtp~------~~-  353 (412)
T PRK04024        309 HDGDFEGKVEVIEKIDKMLGYILDNLDLD----E--VYIAVT---------------------GD-HSTPV------EV-  353 (412)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHhhcC----C--CEEEEe---------------------cC-CCCCc------cc-
Confidence            999 7778889999999999999887521    2  244544                     26 88875      66 


Q ss_pred             CCCCCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHHHHhcCCcCCCC
Q 027156          161 GETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA  227 (227)
Q Consensus       161 ~~~~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evafkL~kapKYGA  227 (227)
                          ++|+++|||+++  +++ ..|+|.++.|+|.+|.+ ||++++++.++|+.++.+++|+.||||
T Consensus       354 ----~~HT~~pVP~ii--~g~-~v~~d~~~~f~E~~~~~-g~l~~~~g~~lm~~~l~~~~~~~~~g~  412 (412)
T PRK04024        354 ----KDHSGDPVPILI--YGP-GVRVDDVEKFNELSAAK-GGLGRIRGLDVMPILLDLMNRAEKFGA  412 (412)
T ss_pred             ----ccCCCCCEeEEE--EcC-CccCCCCCccCHHHHhC-CCCCcccHHHHHHHHHHHhchHhhcCC
Confidence                567799999999  555 66899999999999766 799999999999999999999999998

>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional

Probab=100.00  E-value=4.3e-34  Score=268.26  Aligned_cols=159  Identities=20%  Similarity=0.335  Sum_probs=141.0

Q ss_pred             CCceeEEecCchhhhhhhhhcceEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccC
Q 027156            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (227)
Q Consensus         2 glkaA~It~~~llkg~g~~~G~~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~   81 (227)
                      |||||+|++++++||||+++||+|++ ||+      +    |.+++++++++|          ++|||||||++++|++|
T Consensus       236 Glkga~Ia~~~l~kGi~~~~Gm~~i~-~ga------~----~~~k~~~a~~~l----------~~~DfV~vhvk~~DeaG  294 (395)
T PRK04135        236 KLKAAAIASYPMYRGLAKLVGMDVLP-TGQ------T----LEDEIKTLKENW----------NDYDFFFLHVKKTDSYG  294 (395)
T ss_pred             CCceEEEehhHHHHHHHHHcCCeecC-CCC------C----HHHHHHHHHHHH----------hcCCEEEEEeccCchhh
Confidence            89999999999999999999999999 996      4    999999999999          88999999999999999


Q ss_pred             ccc-chhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcCccCCceeEee
Q 027156           82 DDK-GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMK  160 (227)
Q Consensus        82 h~g-~~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy~~k  160 (227)
                      |+| .++|+++||+||+.+..++ .++      .  .+++||                +     | |+||.      +. 
T Consensus       295 H~gd~~~Kv~~IE~iD~~l~~ll-~l~------~--~~ivVT----------------~-----D-H~TP~------~~-  336 (395)
T PRK04135        295 EDGNFEEKVKVIEEVDALLPEIL-ALK------P--DVLVIT----------------G-----D-HSTPA------VL-  336 (395)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHh-cCC------C--cEEEEe----------------C-----C-CCCcc------cc-
Confidence            999 6677779999999777888 432      2  145544                2     7 99996      67 


Q ss_pred             CCCCCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHHHHhcCCcCCCC
Q 027156          161 GETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA  227 (227)
Q Consensus       161 ~~~~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evafkL~kapKYGA  227 (227)
                          ++|+.+|||+++  |++ ..|+|.+++|+|.++.+ ||+++++|.++|+.++.+++|+.||||
T Consensus       337 ----~~Hs~dPVP~li--~g~-~~~~D~v~~F~E~~~~~-G~L~~~~G~~lm~~~l~~~~~~~~~G~  395 (395)
T PRK04135        337 ----KGHSWHPVPLLL--YSK-YCRPDLSQRFTERECAR-GGLGHIPAVDLMPLALAHALRLEKYGA  395 (395)
T ss_pred             ----cccCCCCEeEEE--EcC-CCCCCCCCccCHHHHcC-CCcCcccHHHHHHHHHHhhhhHhhcCC
Confidence                667799999999  444 67899999999999766 799999999999999999999999998

>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional

Probab=99.97  E-value=6.2e-31  Score=246.85  Aligned_cols=160  Identities=22%  Similarity=0.284  Sum_probs=139.8

Q ss_pred             CCceeEEecCchhhhhhhhhcceEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccC
Q 027156            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (227)
Q Consensus         2 glkaA~It~~~llkg~g~~~G~~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~   81 (227)
                      |||+|+|+++++++|+|+++||+|+.+||+||+.||+    |.+|+++++++|          ++|||||||++++|+++
T Consensus       233 gl~~a~ia~~~l~kGla~~~Gm~~~~vpgatg~~dt~----~~~k~~~a~~~l----------~~~DfV~vh~~~~D~aG  298 (395)
T PRK04200        233 GLKGAVISAVDLLKGIGIYAGLDVIEVPGATGYLDTN----YEGKAEAALEAL----------KTHDFVFVHVEAPDEAG  298 (395)
T ss_pred             CCceEEEeccHHHHHHHHHcCCccccCCCcccccccc----hHHHHHHHHHHh----------ccCCEEEEEecCcchhh
Confidence            8999999999999999999999999999999999997    999999999999          78999999999999999


Q ss_pred             ccc-chhhhhhhHHHHH-HHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcCccCCceeEe
Q 027156           82 DDK-GKAVAHDLEYINA-LVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTM  159 (227)
Q Consensus        82 h~g-~~~~~~~iE~iD~-lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy~~  159 (227)
                      |+| .++|+++||.+|+ +++++++.++..   ..  .+++||                .     | |.||.      ..
T Consensus       299 H~gd~~~kv~aiE~lD~~~~~~ll~al~~~---~~--~~l~it----------------~-----D-H~tp~------~~  345 (395)
T PRK04200        299 HEGDLEAKIKAIEDIDERVVGPILEALKKY---ED--YRILVL----------------P-----D-HPTPI------EL  345 (395)
T ss_pred             ccCCHHHHHHHHHHHHHHhHHHHHHHHHhc---CC--CEEEEe----------------c-----c-CCcCC------CC
Confidence            999 6777779999999 577899886420   02  345544                2     6 88875      66


Q ss_pred             eCCCCCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHHH
Q 027156          160 KGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAF  217 (227)
Q Consensus       160 k~~~~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evaf  217 (227)
                           ++|+.+|||++|  +++ .+|.|.++.|+|.+|.+ ||++++++.++|+.++.
T Consensus       346 -----~~Ht~~pVP~ii--~g~-~~~~d~~~~f~E~~~~~-g~l~~~~g~~lm~~~l~  394 (395)
T PRK04200        346 -----KTHTADPVPFLI--YGE-GIEPDGVQTFDEKSARK-GGLGLVEGCELMELLLK  394 (395)
T ss_pred             -----CccCCCCEeEEE--EcC-CcCCCCCCccCHHHHcC-CCcccccHHHHHHHHhh
Confidence                 667799999999  555 67899999999999776 79999999999999875

>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form

Probab=99.97  E-value=4.1e-30  Score=241.47  Aligned_cols=159  Identities=16%  Similarity=0.230  Sum_probs=139.1

Q ss_pred             CCceeEEecCchhhhhhhhhcceEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccC
Q 027156            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (227)
Q Consensus         2 glkaA~It~~~llkg~g~~~G~~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~   81 (227)
                      |+|||+|+++++++|||+++||+|+.+||+||+.||+    |.+|+++++++|          ++|||||||++++|+++
T Consensus       237 gl~~a~ia~~~l~kGLa~~~Gm~~~~v~gatg~~dt~----~~~k~~~~~~~l----------~~yDfv~v~~~~~D~aG  302 (396)
T TIGR00306       237 GLRGAMIAEVDLIKGLARLIGMDVIRVEGATGGIDTD----YRGKVRALILAL----------EEYDFVLVHTKGPDEAG  302 (396)
T ss_pred             CCceEEEechHHHHHHHHHcCCeeecCCccccccccc----HHHHHHHHHHHh----------hcCCEEEEEecCCChhh
Confidence            8999999999999999999999999999999999997    999999999999          78999999999999999


Q ss_pred             ccc-chhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcCccCCceeEee
Q 027156           82 DDK-GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMK  160 (227)
Q Consensus        82 h~g-~~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy~~k  160 (227)
                      |.| .++|+++||.+|+.+..+++.++..    +  .+++||                     .| |.||.      ++ 
T Consensus       303 H~gd~~~k~~aIE~iD~~l~~~l~~l~~~----~--~~liiT---------------------aD-Hgtp~------~~-  347 (396)
T TIGR00306       303 HDGDPELKVRAIEKIDSKIVGPLLALDLD----E--TRLILT---------------------AD-HSTPV------EV-  347 (396)
T ss_pred             hcCCHHHHHHHHHHHHHHHHHHHHHhhhC----C--CEEEEe---------------------CC-CCCCC------CC-
Confidence            999 6667779999999887668776432    2  345544                     26 88884      66 


Q ss_pred             CCCCCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHHH
Q 027156          161 GETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAF  217 (227)
Q Consensus       161 ~~~~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evaf  217 (227)
                          .+|+++|||+++  +++ ..|+|.+++|+|.+|.+ |++++|++.++|+.+++
T Consensus       348 ----~~Ht~~pVP~ii--~g~-~~~~d~~~~f~E~~~~~-g~l~~~~g~~lm~~~l~  396 (396)
T TIGR00306       348 ----KDHSADPVPIVI--VGP-GVRVDEVKSFNEFACRK-GALGRIRGEDLMDILLD  396 (396)
T ss_pred             ----CCCCCCCeeEEE--EeC-CccCCCCCCcChHHHhC-CCCCcccHHHHHHHHhC
Confidence                667799999999  444 67899999999999777 79999999999998863

This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).

>TIGR02535 hyp_Hser_kinase proposed homoserine kinase

Probab=99.97  E-value=4.6e-30  Score=241.08  Aligned_cols=160  Identities=19%  Similarity=0.304  Sum_probs=138.5

Q ss_pred             CCceeEEecCchhhhhhhhhcceEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccC
Q 027156            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (227)
Q Consensus         2 glkaA~It~~~llkg~g~~~G~~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~   81 (227)
                      |+|+++|+++++++|||+++||+++.+||+||+.||+    |.+|+++++++|          ++|||||||++++|+++
T Consensus       234 gl~~a~ia~~~l~kGla~~~Gm~~~~vpgatg~~dt~----~~~k~~~~~~~l----------~~~Dfv~vh~~~~D~aG  299 (396)
T TIGR02535       234 GIRGAMISAVDLLKGIGIYAGLERIEVEGATGYLDTN----YEGKVRAALEAL----------ETYDFVVVHVEAPDEAG  299 (396)
T ss_pred             CCceEEEeccHHHHHHHHHcCCccccCCccccccccc----hHHHHHHHHHHH----------hhCCEEEEEeCCCChhh
Confidence            8999999999999999999999999999999999997    999999999999          78999999999999999


Q ss_pred             ccc-chhhhhhhHHHHH-HHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcCccCCceeEe
Q 027156           82 DDK-GKAVAHDLEYINA-LVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTM  159 (227)
Q Consensus        82 h~g-~~~~~~~iE~iD~-lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy~~  159 (227)
                      |+| .++|+++||.+|+ ++++++++++..    ....+++||                .     | |.||.      +.
T Consensus       300 H~gd~~~kv~aIE~lD~~~~~~ll~al~~~----~~~~~~~vt----------------~-----D-H~tp~------~~  347 (396)
T TIGR02535       300 HEGDLEAKIKAIELIDSRIVGPLLEALSDR----DEPFRILVL----------------P-----D-HPTPL------EL  347 (396)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEEe----------------e-----e-CccCC------CC
Confidence            999 6777779999999 577899887421    111345544                2     6 88875      56


Q ss_pred             eCCCCCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHH
Q 027156          160 KGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVA  216 (227)
Q Consensus       160 k~~~~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~eva  216 (227)
                           ++|+.+|||++|+  ++ .+|+|.+++|+|.+|.+ |+++++.+.++|+.++
T Consensus       348 -----~~Ht~~pVP~ii~--g~-~~~~d~~~~f~E~~~~~-g~l~~~~g~~lm~~~~  395 (396)
T TIGR02535       348 -----KTHTAEPVPFLLY--GK-GIESDSVKTFDEKSARR-GGIGFVKGCELMDALI  395 (396)
T ss_pred             -----CccCCCCEeEEEE--eC-CcCCCCCCccCHHHHcC-CCcccccHHHHHHHHh
Confidence                 6677999999994  44 67899999999999777 7999999999999875

The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.

>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases

Probab=99.78  E-value=1.6e-19  Score=159.37  Aligned_cols=162  Identities=19%  Similarity=0.270  Sum_probs=126.7

Q ss_pred             CCceeEEecCchhhhhhhhhc-ceEeecCCcccccCCCCCCChhHH--HHHHHHHhccccCcccccCcccEEEEeccCCC
Q 027156            2 GLKAALITTNSRLKSFGDKLG-FATLQLNELIETSDSLSGSPIDVV--ASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE   78 (227)
Q Consensus         2 glkaA~It~~~llkg~g~~~G-~~v~~~~g~tg~~dt~~~~~~~~~--a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d   78 (227)
                      |+++++|+.+.++.+++..+| +++++.+|+|+..+++    +.++  ++++++.|        ++.+|||||+|+..+|
T Consensus        85 ~l~~~~ia~~~~~~~i~~~~~g~~v~~~~g~t~~~~~~----~~~~~~~~~~~~~l--------~~~~~~~v~~~~~~~D  152 (252)
T PF01676_consen   85 GLKGAGIAETPKIGGIADFFGGMDVISVEGATGDVDPD----MSAKEIAEAAIEAL--------KKDKYDFVFVHVKGTD  152 (252)
T ss_dssp             THHEEEEEECHHHHHHHHHTTTEEEE--STSSCCGSTT----TTHHHHHHHHHHHH--------HHTTSSEEEEEEEHHH
T ss_pred             CceecceecccccceeHHHhCCcccccccccccccccc----hhhHHHHHHHHHhh--------hcccCCeEEEeecCcc
Confidence            789999999999999999999 9999999999999996    6665  89999988        3478999999999999


Q ss_pred             ccCccc-chhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcCccCCcee
Q 027156           79 KTNDDK-GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSY  157 (227)
Q Consensus        79 ~a~h~g-~~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy  157 (227)
                      ++||.+ .+++.++||++|+.|++|++.++..    +  .+.+||  +                   | |-++-      
T Consensus       153 ~~GH~~~~~~~~~~ie~~D~~l~~l~~~~~~~----~--~~liiT--a-------------------D-Hg~~~------  198 (252)
T PF01676_consen  153 EAGHRGDPEAYIEAIERIDRFLGRLLEALDKE----D--DLLIIT--A-------------------D-HGNDE------  198 (252)
T ss_dssp             HHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHT----T--EEEEEE--E-------------------S-SBSTT------
T ss_pred             hhhccCCHHHHHHHHHHHHHHHHHHHHHHhcC----C--CEEEEE--C-------------------C-CCCcc------
Confidence            999998 7777779999999999999987321    2  244544  2                   4 55543      


Q ss_pred             EeeCCCCCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHH
Q 027156          158 TMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVA  216 (227)
Q Consensus       158 ~~k~~~~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~eva  216 (227)
                      +++.   ..|+++|||+++  |++ ..|.|.+..|++.+... +..+.+.+..+++++.
T Consensus       199 ~~~~---~~Ht~~~VPll~--~g~-~~~~~~~~~~~~~~di~-~ti~~~~G~~~~~~~~  250 (252)
T PF01676_consen  199 TMGH---TSHTREPVPLLI--YGP-GVRGDSVGEFGELADIA-PTILELLGLELPEEMT  250 (252)
T ss_dssp             TSBS---SS-B-B-EEEEE--ECT-TEEE-SC-STSBCGHHH-HHHHHHHTGGHHTTCH
T ss_pred             ccCC---cCCCCceEEEEE--EeC-CCccCccCcCCEEehHH-HHHHHHcCCCchHhhc
Confidence            4433   348899999999  555 77889999999988666 5888999988887764

This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....

>PRK12383 putative mutase; Provisional

Probab=99.18  E-value=2e-10  Score=109.07  Aligned_cols=85  Identities=13%  Similarity=0.153  Sum_probs=69.4

Q ss_pred             CCceeEEecCchhhhhhhhhcceEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccC
Q 027156            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (227)
Q Consensus         2 glkaA~It~~~llkg~g~~~G~~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~   81 (227)
                      |+++++|         |+..  |++..+|+|++..+.   +.+.++.+++++|.        ...+||||+|+..+|.+|
T Consensus       244 G~~v~~V---------GKi~--Di~s~~G~t~~~~~~---~t~~~~~~~l~aL~--------~~~~dlvfvnl~~~D~~G  301 (406)
T PRK12383        244 GVPVVLV---------GKVA--DIVNNPYGVSWQNLV---DTQRVMDITLDEFN--------THPTAFICTNIQETDLAG  301 (406)
T ss_pred             CCCEEEE---------EEhH--HeeccCCcccccccC---CHHHHHHHHHHHHh--------cCCCCEEEEeccCCcccc
Confidence            5666666         5555  888899999976654   46799999999992        234899999999999999


Q ss_pred             ccc-chhhhhhhHHHHHHHHHHHHhcCC
Q 027156           82 DDK-GKAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        82 h~g-~~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      |.+ .+.+..+||.+|+.++.+++.+++
T Consensus       302 H~~d~~~y~~aiE~iD~~lg~ll~~L~~  329 (406)
T PRK12383        302 HAEDVARYAERLEVVDRNLARLLEAMTP  329 (406)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999 666677999999999999998864

>TIGR01696 deoB phosphopentomutase

Probab=98.62  E-value=6.3e-07  Score=84.85  Aligned_cols=145  Identities=10%  Similarity=0.132  Sum_probs=95.6

Q ss_pred             hhhhhcceEeec---------CCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCc-cCccc-c
Q 027156           17 FGDKLGFATLQL---------NELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TNDDK-G   85 (227)
Q Consensus        17 ~g~~~G~~v~~~---------~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~-a~h~g-~   85 (227)
                      .....|.+|+.|         .|+|....+.   +.+..+.+++++|.        ...+||||+|+...|. +||.+ .
T Consensus       222 ~l~~aG~~V~~VGki~DiF~g~Glt~a~~~~---~~~~~~~~~l~aL~--------~~~~~lif~nl~d~D~~~GH~~d~  290 (381)
T TIGR01696       222 KLKDEGHDVISIGKIADIYDGEGITKKVRTT---SNMDGMDATIKEMK--------EDFTGISFTNLVDFDALWGHRRDV  290 (381)
T ss_pred             HHHHCCCeEEEEccHHhEecCCCcccccCCC---CHHHHHHHHHHHHh--------cCCCCEEEEEeCCCccccCCCCCH
Confidence            345566666555         4555544443   57888999999992        2348999999999994 79999 5


Q ss_pred             hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCc-CccCCceeEeeCCCC
Q 027156           86 KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLS-ALFPRQSYTMKGETP  164 (227)
Q Consensus        86 ~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~t-pl~P~QSy~~k~~~~  164 (227)
                      +....+||.+|+.|+.+++.++++    .   +++|+  +     ||               -+ |       ... |  
T Consensus       291 ~~y~~ale~vD~~Lg~ll~~L~~~----t---llIIT--A-----DH---------------G~Dp-------~~~-~--  331 (381)
T TIGR01696       291 AGYAAALELFDRRLPELFSLLRED----D---LLIIT--A-----DH---------------GNDP-------TWT-G--  331 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccC----C---EEEEE--C-----CC---------------CCCC-------CCC-C--
Confidence            566669999999999999988642    2   34444  2     44               33 2       110 0  


Q ss_pred             CCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHHHHhcCC-cCCC
Q 027156          165 RNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKA-PKYG  226 (227)
Q Consensus       165 ~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evafkL~ka-pKYG  226 (227)
                      .+|+|++||+++  |.+. .+.-  ..+.     .     +.-..++.+.++..+|-. |.+|
T Consensus       332 t~HTre~VPlIi--~gp~-i~~g--~~l~-----~-----~~slaDIapTIldllGv~~p~~G  379 (381)
T TIGR01696       332 TDHTREYIPVLV--YSPK-VKPG--HSLG-----H-----RETFADIGATIADNFGTSDPEYG  379 (381)
T ss_pred             CcCCCCCEeEEE--EECC-CCCC--ceeC-----C-----CCEehhHHHHHHHHcCcCCCCCC
Confidence            347899999999  4432 2211  0011     1     234578889999988876 7776

This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli and Bacillus. This model matches pfam01676 for Metalloenzyme superfamily.

>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Probab=98.59  E-value=3.6e-07  Score=89.96  Aligned_cols=77  Identities=17%  Similarity=0.123  Sum_probs=57.0

Q ss_pred             eEeecCCc-ccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccCccc-chhhhhhhHHHHHHHHH
Q 027156           24 ATLQLNEL-IETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDK-GKAVAHDLEYINALVRV  101 (227)
Q Consensus        24 ~v~~~~g~-tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~h~g-~~~~~~~iE~iD~lvg~  101 (227)
                      +.+.+|-- ..++|---.=+....+.++++.+        ...+|||||+|+..+|.+||.| .+++.++||.+|+.+++
T Consensus       385 ~~i~ipsp~v~tyd~~PeMSA~eVtd~~i~~i--------~~~~ydfi~vNfan~DmvGHtG~~ea~ikAIE~vD~~Lg~  456 (558)
T PLN02538        385 EYVEIPSDNGIPFNVQPKMKALEIAEKARDAL--------LSGKFDQVRVNLANGDMVGHTGDLEATIVACEAVDAAVKE  456 (558)
T ss_pred             eEEECCCCCCCCcccCCCCCHHHHHHHHHHHH--------hcCCCCEEEEeccCcccccCCCCHHHHHHHHHHHHHHHHH
Confidence            34445542 23344332334556888888888        3357999999999999999999 56677799999999999


Q ss_pred             HHHhcCC
Q 027156          102 ILQMAQP  108 (227)
Q Consensus       102 il~~~~~  108 (227)
                      |++.++.
T Consensus       457 Il~al~~  463 (558)
T PLN02538        457 ILDAVEQ  463 (558)
T ss_pred             HHHHHHh
Confidence            9988743

>PRK05434 phosphoglyceromutase; Provisional

Probab=98.31  E-value=2.2e-06  Score=83.77  Aligned_cols=59  Identities=8%  Similarity=0.223  Sum_probs=50.8

Q ss_pred             ChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccCccc-chhhhhhhHHHHHHHHHHHHhcCC
Q 027156           42 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDK-GKAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        42 ~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~h~g-~~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      +...++.+++++|.        ..+|||||||++.+|.+||.| .+++.++||.+|+.|+.|++.++.
T Consensus       371 s~~e~~d~~i~~l~--------~~~~Dfv~vnf~~~D~vGHtg~~~a~~~AIe~vD~~LGrll~aLk~  430 (507)
T PRK05434        371 SAYEVTDKLVEAIE--------SGKYDFIILNFANPDMVGHTGNLEAAVKAVEAVDECLGRVVDAVLK  430 (507)
T ss_pred             cHHHHHHHHHHHHh--------ccCCCEEEEEecCcchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            35668999999982        258999999999999999999 667777999999999999988754

>PRK05362 phosphopentomutase; Provisional

Probab=98.14  E-value=2.5e-05  Score=74.38  Aligned_cols=60  Identities=13%  Similarity=0.061  Sum_probs=50.0

Q ss_pred             ChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCc-cCccc-chhhhhhhHHHHHHHHHHHHhcCC
Q 027156           42 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TNDDK-GKAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        42 ~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~-a~h~g-~~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      ++...+.+++++|.       +..+++|||+|+...|. +||.+ .+....+||.+|+.|+.+++.+++
T Consensus       260 ~~~~~~~~ale~L~-------~~~~~~fvfvn~~~~D~~~GH~~~~~~y~~ale~~D~~lg~ll~~L~~  321 (394)
T PRK05362        260 SNMDGMDATIEEMK-------EAGDNGLVFTNLVDFDSLYGHRRDVAGYAAALEEFDARLPELLAALKE  321 (394)
T ss_pred             CHHHHHHHHHHHHH-------hCCCCcEEEEecccCccccCCcCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            57889999999991       02468999999999998 49987 556667999999999999998864

>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Probab=97.75  E-value=0.00021  Score=70.04  Aligned_cols=59  Identities=15%  Similarity=0.298  Sum_probs=49.7

Q ss_pred             ChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccCcccch-hhhhhhHHHHHHHHHHHHhcCC
Q 027156           42 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK-AVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        42 ~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~h~g~~-~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      .....+.++++.|        +..+||||++|+..+|.+||.|.. +...+||.+|..||.|++.++.
T Consensus       365 sa~evtd~~i~~I--------~~~k~dfi~vnfan~DmvGHtg~~~a~v~AIE~vD~~LGrIl~aLke  424 (501)
T TIGR01307       365 SAKAVTDAVLEAI--------AQGKFDLIVVNFANPDMVGHTGNFEAAIKAVEALDVCLGRIVEACKK  424 (501)
T ss_pred             CHHHHHHHHHHHH--------hccCCCEEEEECCCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3556788888888        225699999999999999999954 7777999999999999999864

This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.

>cd00016 alkPPc Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH

Probab=97.13  E-value=0.006  Score=57.86  Aligned_cols=59  Identities=7%  Similarity=0.144  Sum_probs=47.9

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCcccEEEEeccC--CCccCccc-chhhhhhhHHHHHHHHHHHHhcC
Q 027156           40 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA--GEKTNDDK-GKAVAHDLEYINALVRVILQMAQ  107 (227)
Q Consensus        40 ~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a--~d~a~h~g-~~~~~~~iE~iD~lvg~il~~~~  107 (227)
                      .++.....++++++|.         ++.+-.||||+.  .|.++|.. .+.+...++.+|..|+.+++.++
T Consensus       230 ~psL~emt~~al~~L~---------~~~~gFfl~ve~~~iD~~gH~~d~~~~~~~l~~~D~av~~~l~~l~  291 (384)
T cd00016         230 EPSLAEMTEKAIDVLS---------KNPNGFFLMVEGGRIDHAHHANDAAGALSETLAFDDAVEAALDFAK  291 (384)
T ss_pred             CCCHHHHHHHHHHHHH---------hcCCcEEEEEeCCCCCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4568899999999992         335777788886  89999998 45556699999999999998875

Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity.

>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]

Probab=96.53  E-value=0.017  Score=55.13  Aligned_cols=107  Identities=16%  Similarity=0.151  Sum_probs=72.9

Q ss_pred             eEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcc-cEEEEeccCCC-ccCccc-chhhhhhhHHHHHHHH
Q 027156           24 ATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF-DLVLVHIGAGE-KTNDDK-GKAVAHDLEYINALVR  100 (227)
Q Consensus        24 ~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~-DlVfvHv~a~d-~a~h~g-~~~~~~~iE~iD~lvg  100 (227)
                      |++.-.|.|....+.   +.+......|+.++        ++++ .|||.++.-.| .+||-- ...=+++||.+|+-+.
T Consensus       248 DI~~~~Git~~~~~~---~n~~~~d~tl~~~~--------~~~~~~~vFtNlVdfD~~yGHRrDv~gYa~aLe~FD~rL~  316 (397)
T COG1015         248 DIYAGQGITEKVKAV---SNMDGMDVTLEEMK--------TAEFNGLVFTNLVDFDSLYGHRRDVAGYAAALEEFDRRLP  316 (397)
T ss_pred             hhhccccccccccCC---CcHHHHHHHHHHHh--------cCCCCcEEEEeeeecccccccccchHHHHHHHHHHHHHHH
Confidence            556667777776444   45667777777772        2344 49999999888 788854 3334559999999999


Q ss_pred             HHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcCccCCceeEeeCCCCCCCcCCCccEEEEEc
Q 027156          101 VILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQW  179 (227)
Q Consensus       101 ~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy~~k~~~~~~~~r~pvP~li~~~  179 (227)
                      ++++.++++    +  ++++ |       .||-           . +||          +.|+  +|+|+.+|+|+++.
T Consensus       317 e~~~~l~ed----D--lLii-T-------ADHG-----------n-DPT----------~~gT--dHTRE~iPvl~y~~  357 (397)
T COG1015         317 ELIENLRED----D--LLII-T-------ADHG-----------N-DPT----------WGGT--DHTREYIPVLVYGP  357 (397)
T ss_pred             HHHHhcCCC----C--EEEE-e-------cCCC-----------C-CCC----------CCCC--CccccccceEEEcC
Confidence            999999874    3  3333 2       2553           2 342          2233  69999999999444

>KOG4513 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]

Probab=94.42  E-value=0.2  Score=48.43  Aligned_cols=96  Identities=18%  Similarity=0.178  Sum_probs=66.0

Q ss_pred             HHHHHHHHHhccccCcccccCcccEEEEeccCCCccCccc-chhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEe
Q 027156           45 VVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDK-GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLS  123 (227)
Q Consensus        45 ~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~h~g-~~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~  123 (227)
                      ..|.++.+.+        +...||+|.+++..+|-.+|-| +|.-+.+.|--|..|+.|.++.+.     -+ +..+|| 
T Consensus       391 eva~ka~~~i--------e~G~~p~v~vNlappDMVGHTG~~EAtv~AcEatD~aig~Iy~A~~~-----~~-y~lvvT-  455 (531)
T KOG4513|consen  391 EVAEKARDAI--------ESGKFPQVRVNLAPPDMVGHTGDIEATVVACEATDEAIGKIYDAIEQ-----VG-YILVVT-  455 (531)
T ss_pred             HHHHHHHHHH--------HcCCCCeEEEcCCCccccCcccchhhhhhHHHHHHHHHHHHHHHHHh-----cC-cEEEEE-
Confidence            3566666666        3356999999999999999999 666677999999999999998765     22 223333 


Q ss_pred             ccccccccCCCcceeecccccCCCCcCccCCceeEeeCCCCCCCcCCCccEEEEEc
Q 027156          124 YGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQW  179 (227)
Q Consensus       124 yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy~~k~~~~~~~~r~pvP~li~~~  179 (227)
                            .||-+.      .  +     .     ..--+|+...|+-.|||+.|-..
T Consensus       456 ------ADHGNA------E--k-----M-----v~~dgGk~tsHT~~~VPl~i~~p  487 (531)
T KOG4513|consen  456 ------ADHGNA------E--K-----M-----VKRDGGKLTSHTLKPVPLAIGGP  487 (531)
T ss_pred             ------cCCCCH------H--H-----h-----ccCCCCccccccccccceEecCC
Confidence                  144311      0  0     0     01235665678899999999433

>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]

Probab=93.57  E-value=0.4  Score=47.34  Aligned_cols=57  Identities=14%  Similarity=0.275  Sum_probs=45.6

Q ss_pred             hHHHHHHHHHhccccCcccccCcccEEEEeccCCCccCccc-chhhhhhhHHHHHHHHHHHHhcCC
Q 027156           44 DVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDK-GKAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        44 ~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~h~g-~~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      -....++++++        +...||+++++..-+|-.+|-| .+.-.+++|-+|.=|+.+.+....
T Consensus       374 ~evtd~~~~~i--------~~g~~D~iV~N~ANpDMVGHTG~~eatiKAvEavD~~lg~ivd~~~~  431 (509)
T COG0696         374 KEVTDALVEAI--------EKGKYDLIVLNYANPDMVGHTGNFEATIKAVEAVDECLGRIVDAVKK  431 (509)
T ss_pred             HHHHHHHHHHH--------hCCCCCEEEEecCCCccCcccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34566777766        2245899999999999999999 555566999999999999988654

>PF01663 Phosphodiest: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro: IPR002591 This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase I / nucleotide pyrophosphatase (nppase)

Probab=91.22  E-value=0.4  Score=42.62  Aligned_cols=44  Identities=11%  Similarity=0.194  Sum_probs=36.9

Q ss_pred             CcccEEEEeccCCCccCccc---chhhhhhhHHHHHHHHHHHHhcCC
Q 027156           65 SQFDLVLVHIGAGEKTNDDK---GKAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        65 ~~~DlVfvHv~a~d~a~h~g---~~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      .+.||+++|+..+|.++|.-   ..+-...+.++|..|+.+++.++.
T Consensus       182 ~~pdl~~~~~~~~D~~~H~~g~~s~~~~~~~~~~D~~ig~l~~~l~~  228 (365)
T PF01663_consen  182 ERPDLIFVYFPEPDHIGHRYGPDSPEIEDAYRRIDQAIGRLLEALDE  228 (365)
T ss_dssp             TTESEEEEEEECCHHHHHHH-TTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEecCCCccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            67999999999999999932   334567999999999999988764

These enzymes catalyse the cleavage of phosphodiester and phosphosulphate bonds in NAD, deoxynucleotides and nucleotide sugars []. Another member of this family is ATX an autotaxin, tumor cell motility-stimulating protein which exhibits type I phosphodiesterases activity []. The alignment encompasses the active site [, ]. Also present within this family is 60 kDa Ca2+-ATPase from Myroides odoratus []. This signature also hits a number of ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis.; GO: 0003824 catalytic activity; PDB: 2XRG_A 2XR9_A 3T02_A 3T01_A 3SZZ_A 3SZY_A 3T00_A 3NKM_A 3NKN_A 3NKR_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	227
3kd8_A	399	2,3-bisphosphoglycerate-independent phosphoglycera	99.96
2zkt_A	412	2,3-bisphosphoglycerate-independent phosphoglycer	99.88
3igz_B	561	Cofactor-independent phosphoglycerate mutase; glyc	98.52
2i09_A	403	Phosphopentomutase; structural genomics, target T1	98.31
3ot9_A	399	Phosphopentomutase; alkaline phosphatase like core	98.17
1o98_A	511	2,3-bisphosphoglycerate-independent phosphoglycera	97.89
1zed_A	484	Alkaline phosphatase; phosphoserine, substrate ana	97.16
3m7v_A	413	Phosphopentomutase; structural genomics, nysgrc, c	96.58
3tg0_A	449	Apase, alkaline phosphatase; hydrolase; 1.20A {Esc	96.21
2w5v_A	375	Alkaline phosphatase; psychrophiles, cold adaptati	94.94
3q3q_A	565	Alkaline phosphatase; hydrolase; 1.95A {Sphingomon	91.4
3a52_A	400	Cold-active alkaline phosphatase; hydrolase; 2.20A	90.0
1k7h_A	476	Alkaline phosphatase; hydrolase, transferase, phos	89.9
3nkq_A	831	Ectonucleotide pyrophosphatase/phosphodiesterase m	88.25
4gtw_A	823	Ectonucleotide pyrophosphatase/phosphodiesterase m	85.9
3szy_A	427	Phosphonoacetate hydrolase; alkaline phosphatase s	83.08
2w0y_A	473	APH, alkaline phosphatase; hydrolase, halophilic;	82.73

>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A

Probab=99.96  E-value=2.4e-30  Score=242.01  Aligned_cols=159  Identities=15%  Similarity=0.128  Sum_probs=120.3

Q ss_pred             CCceeEEecCchhhhhhhhhcceEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccC
Q 027156            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (227)
Q Consensus         2 glkaA~It~~~llkg~g~~~G~~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~   81 (227)
                      |+|+++|+++++++|||+++||+++++||+||+.|||    |++|+++++++|          ++|||||+|++.+|.+|
T Consensus       240 gl~~~~Ia~~~l~~GLa~~aGm~~~~vpgatg~~dt~----~~~k~~~~i~~l----------~~~d~v~~n~~~~D~~G  305 (399)
T 3kd8_A          240 RMKGACVVGSPWLKGLCRLLRMDVFDVPGATGTVGSN----YRGKIEKAVDLT----------SSHDFVLVNIKATDVAG  305 (399)
T ss_dssp             SSCEEEECCCHHHHHHHHHTTCEEECCCC------CC----HHHHHHHHHHHT----------TTCSEEEEEEECC----
T ss_pred             CCcceEEecchHHHHHHHhCCCeeeeccCcCCCcccc----HHHHHHHHHHHH----------hhCCEEEEEecCcchhh
Confidence            7899999999999999999999999999999999997    999999999999          77999999999999999


Q ss_pred             ccc-chhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcCccCCceeEee
Q 027156           82 DDK-GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMK  160 (227)
Q Consensus        82 h~g-~~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy~~k  160 (227)
                      |.| .+++.++||.+|+.|++|++ +++     +  .+++||                     .| |.+|.      +. 
T Consensus       306 H~gd~~~~~~aie~~D~~l~~i~~-l~~-----~--~~liIT---------------------aD-Hg~p~------~~-  348 (399)
T 3kd8_A          306 HDGNYPLKRDVIEDIDRAMEPLKS-IGD-----H--AVICVT---------------------GD-HSTPC------SF-  348 (399)
T ss_dssp             --CCHHHHHHHHHHHHHTTGGGGS-CTT-----T--EEEEEE---------------------EC---------------
T ss_pred             hccCHHHHHHHHHHHHHHHHHHHc-cCC-----C--CEEEEE---------------------CC-CCCCC------CC-
Confidence            999 67777799999999999988 653     2  344544                     26 77774      44 


Q ss_pred             CCCCCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHHHHhc
Q 027156          161 GETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLW  220 (227)
Q Consensus       161 ~~~~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evafkL~  220 (227)
                          .+|+++|||+++  +++ ..|+|.|++|+|.+|.+ |++ +|++.+||+.++.+++
T Consensus       349 ----~~HT~~pVP~ii--~g~-~~~~d~v~~f~E~~~~~-g~l-~~~g~~lm~~~l~~~~  399 (399)
T 3kd8_A          349 ----KDHSGDPVPIVF--YTD-GVMNDGVHLFDELSSAS-GSL-RITSYNVMDILMQLAG  399 (399)
T ss_dssp             --------CCCEEEEE--EET-TCCCCSCCCCSTTTGGG-SSE-EEEGGGHHHHHHHTTC
T ss_pred             ----CCCCCCCccEEE--EcC-CCCCCCCCccCHHHHhC-CCc-cccHHHHHHHHHHhcC
Confidence                458899999999  544 56899999999999766 799 9999999999998764

>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}

Probab=99.88  E-value=1.4e-22  Score=189.55  Aligned_cols=169  Identities=18%  Similarity=0.233  Sum_probs=145.6

Q ss_pred             CCceeEEecCchhhhhhhhhcceEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccC
Q 027156            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (227)
Q Consensus         2 glkaA~It~~~llkg~g~~~G~~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~   81 (227)
                      ++++++|+..++.+|||+.+||+++.++|+||+.+++    ++.++.++++.|          +.+||||+|+..+|.++
T Consensus       243 ~~~~~~Va~~~l~~Gigk~~gmd~~~~~g~t~~~~~~----~~~~~~~~~~~l----------~~~d~v~v~~~~~D~~G  308 (412)
T 2zkt_A          243 KVKAAGVIAVALVKGVARAVGFDVYTPEGATGEYNTN----EMAKAKKAVELL----------KDYDFVFLHFKPTDAAG  308 (412)
T ss_dssp             TCCEEEECCSHHHHHHHHHTTCEEECCTTCCSSTTCC----HHHHHHHHHHHH----------HHCSEEEEEECHHHHHH
T ss_pred             CcCcceEeeccccchhhhhcccceeeccCccCCCCCC----HHHHHHHHHHHh----------cCCCEEEEcCccCChHH
Confidence            6789999999999999999999999999999999997    999999999999          57899999999999999


Q ss_pred             ccc-chhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcCccCCceeEee
Q 027156           82 DDK-GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMK  160 (227)
Q Consensus        82 h~g-~~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tpl~P~QSy~~k  160 (227)
                      |.+ .+++.++||++|..+++|++.++..    .  .+++||                     .| |-+|.      .. 
T Consensus       309 H~~d~~~~~~aie~~D~~lg~ll~al~~~----~--~~liit---------------------aD-HG~p~------~~-  353 (412)
T 2zkt_A          309 HDNKPKLKAELIERADRMIGYILDHVDLE----E--VVIAIT---------------------GD-HSTPC------EV-  353 (412)
T ss_dssp             HTTCHHHHHHHHHHHHHHHHHHHTTSCTT----T--EEEEEE---------------------CS-SBCCT------TT-
T ss_pred             HcCCHHHHHHHHHHHHHHHHHHHHHHHhC----C--CEEEEE---------------------CC-CCCCC------CC-
Confidence            999 6677779999999999999887652    2  345544                     25 66652      33 


Q ss_pred             CCCCCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHHHHhcCCcCCCC
Q 027156          161 GETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA  227 (227)
Q Consensus       161 ~~~~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evafkL~kapKYGA  227 (227)
                          .+|+++|||+++  +.+ ..+.|.++.|+|.++. .|+++.+.+.++++.++..||..+||||
T Consensus       354 ----~~Ht~~~VP~ii--~g~-~~~~~~~~~f~E~~~~-~g~l~~i~~~Di~pTil~llg~~~~~G~  412 (412)
T 2zkt_A          354 ----MNHSGDPVPLLI--AGG-GVRTDDTKRFGEREAM-KGGLGRIRGHDIVPIMMDLMNRSEKFGA  412 (412)
T ss_dssp             ----TSCBCCCEEEEE--EST-TCCCCSCCSCSHHHHT-TCTTEEEEGGGHHHHHHHHTTCCCCCCC
T ss_pred             ----CcCCCCceeEEE--EeC-CcCCCccccccccccc-CcccccccHHHHHHHHHHHhCCCccCCC
Confidence                457899999999  544 4566889999998865 4789899999999999999999999997

>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A

Probab=98.52  E-value=1.3e-07  Score=91.85  Aligned_cols=71  Identities=8%  Similarity=0.159  Sum_probs=58.1

Q ss_pred             eecCCccc--ccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccCccc-chhhhhhhHHHHHHHHHH
Q 027156           26 LQLNELIE--TSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDK-GKAVAHDLEYINALVRVI  102 (227)
Q Consensus        26 ~~~~g~tg--~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~h~g-~~~~~~~iE~iD~lvg~i  102 (227)
                      |+.|.+|.  ....    ++..++.+++++|        +..++||||||+..+|.+||.| .+++.++||.+|+.||.|
T Consensus       383 ipSpkatyd~~Pem----sa~ev~d~~i~al--------~~~~~DfI~vn~an~DmvGHtGd~~a~~kAIE~vD~~LGrI  450 (561)
T 3igz_B          383 VPSDRVQFNEKPRM----QSAAITEAAIEAL--------KSGMYNVVRINFPNGDMVGHTGDLKATITGVEAVDESLAKL  450 (561)
T ss_dssp             ECCCSSCGGGSTTT----THHHHHHHHHHHH--------HHSCCSEEEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCCccCCCCC----CHHHHHHHHHHHH--------HhCCCCEEEEecCChhhhhcCCCHHHHHHHHHHHHHHHHHH
Confidence            55666665  3444    3888999999998        2356999999999999999999 567777999999999999


Q ss_pred             HHhcCC
Q 027156          103 LQMAQP  108 (227)
Q Consensus       103 l~~~~~  108 (227)
                      ++.++.
T Consensus       451 l~aL~e  456 (561)
T 3igz_B          451 KDAVDS  456 (561)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998754

>2i09_A Phosphopentomutase; structural genomics, target T1865, NYSGXRC, PSI, protein structure initiative; 2.00A {Streptococcus mutans} PDB: 3m7v_A

Probab=98.31  E-value=1.3e-06  Score=82.00  Aligned_cols=80  Identities=9%  Similarity=0.096  Sum_probs=60.4

Q ss_pred             hhhhcceEeec---------CCccccc-CCCCCCChhHHHHHHHHHhccccCccccc-Ccc-cEEEEeccCCCc-cCccc
Q 027156           18 GDKLGFATLQL---------NELIETS-DSLSGSPIDVVASELLKLLGLQRGKMEEV-SQF-DLVLVHIGAGEK-TNDDK   84 (227)
Q Consensus        18 g~~~G~~v~~~---------~g~tg~~-dt~~~~~~~~~a~~al~lLg~~e~~~~~~-~~~-DlVfvHv~a~d~-a~h~g   84 (227)
                      .+.+|.+|+-|         +|+|... .+.   +.+...++++++|.        . ..+ ||||+|+..+|. +||.+
T Consensus       237 L~~aG~~V~~VGKi~Dif~g~GiT~~~~~~~---~~~e~~d~~i~~l~--------~~~~~~dfi~vn~~~~Dm~~GH~~  305 (403)
T 2i09_A          237 LADAGVSTYAVGKINDIFNGSGITNDMGHNK---SNSHGVDTLIKTMG--------LSAFTKGFSFTNLVDFDALYGHRR  305 (403)
T ss_dssp             HHHTTCEEEEETTHHHHTTTTTCSEECCCCS---SHHHHHHHHHHHHH--------CSSCCSEEEEEEECHHHHHTTTTT
T ss_pred             HHHCCCeEEEEcchHHeecCCCccccccCCC---CHHHHHHHHHHHHH--------hcCCCCCEEEEEeccCCcccCcCC
Confidence            34556666554         4555544 443   45778899999882        2 235 999999999996 99999


Q ss_pred             -chhhhhhhHHHHHHHHHHHHhcCC
Q 027156           85 -GKAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        85 -~~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                       .+....+||.+|+.|+.|++.++.
T Consensus       306 d~~~y~~aIe~vD~~LG~Il~aL~~  330 (403)
T 2i09_A          306 NAHGYRDCLHEFDERLPEIIAAMKV  330 (403)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhCC
Confidence             566667999999999999999875

>3ot9_A Phosphopentomutase; alkaline phosphatase like core domain, R phosphate, ribose-1-phosphate, glucose-1,6-bisphosphate, PH transfer, isomerase; HET: TPO G16; 1.75A {Bacillus cereus} PDB: 3m8y_A* 3m8w_A* 3m8z_A* 3twz_A* 3tx0_A 3uo0_A* 3un2_A 3un3_A* 3un5_A 3uny_A

Probab=98.17  E-value=6.2e-06  Score=77.23  Aligned_cols=81  Identities=7%  Similarity=0.057  Sum_probs=62.2

Q ss_pred             hhhhhcceEeec---------CCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCc-cCccc-c
Q 027156           17 FGDKLGFATLQL---------NELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TNDDK-G   85 (227)
Q Consensus        17 ~g~~~G~~v~~~---------~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~-a~h~g-~   85 (227)
                      ..+.+|.+|+-|         +|+|....+.   +......++++.|        +...+||||+|+...|. ++|.+ .
T Consensus       232 ~L~~aG~~v~~VGKi~Dif~g~Git~~~~~~---~~~~~~d~~i~~L--------~~~~~dfv~vn~~~~D~~~GH~~~~  300 (399)
T 3ot9_A          232 ELKDSDYDVIAIGKISDIYDGEGVTESLRTK---SNMDGMDKLVDTL--------NMDFTGLSFLNLVDFDALFGHRRDP  300 (399)
T ss_dssp             HHHHTTCEEEEETTHHHHTTTTTCSEEECCS---SHHHHHHHHHHHH--------TSCCSEEEEEEECHHHHHTTTTTCH
T ss_pred             HHHHcCCeEEEeccHHheecCCCccceeccC---ChHHHHHHHHHHH--------HhCCCCEEEEEecCCcccccccCCH
Confidence            345667777766         3444444332   4677889999988        22468999999999999 99988 5


Q ss_pred             hhhhhhhHHHHHHHHHHHHhcCC
Q 027156           86 KAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        86 ~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      .....+||++|..|+.|++.++.
T Consensus       301 ~~Y~~aIe~vD~~IGrIL~~L~e  323 (399)
T 3ot9_A          301 QGYGEALQEYDARLPEVFAKLKE  323 (399)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhc
Confidence            66667999999999999999875

>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A

Probab=97.89  E-value=7.5e-05  Score=71.85  Aligned_cols=162  Identities=11%  Similarity=0.153  Sum_probs=100.1

Q ss_pred             CCceeEEecCchhhhhhh---------hhcceEeecCC-cccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEE
Q 027156            2 GLKAALITTNSRLKSFGD---------KLGFATLQLNE-LIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVL   71 (227)
Q Consensus         2 glkaA~It~~~llkg~g~---------~~G~~v~~~~g-~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVf   71 (227)
                      |++.+.|+.......+.-         ..|++.+-+|. ..+..|....-+.+..+.++++.|.        ..++||+|
T Consensus       325 Gy~~~~IaetekyahvtfF~nGg~~~~~~G~dr~l~~sp~v~tYDl~p~ms~~ev~d~ai~~L~--------~~kpdfi~  396 (511)
T 1o98_A          325 GLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEIE--------ADKYDAII  396 (511)
T ss_dssp             TCCEEEEEEGGGHHHHTTTTTTSCCSCCTTEEEEEECCCSCSSGGGSTTTTHHHHHHHHHHHHH--------TTCCSEEE
T ss_pred             CCcEEEEecccccCceeeecCCCcccccCCCcceecccCcccccccCccccHHHHHHHHHHHHH--------ccCCcEEE
Confidence            667777776655555433         45666444431 2333332111235568888998882        24689999


Q ss_pred             EeccCCCccCccc-chhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeecccccCCCCcC
Q 027156           72 VHIGAGEKTNDDK-GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSA  150 (227)
Q Consensus        72 vHv~a~d~a~h~g-~~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~~~ds~~tp  150 (227)
                      +|...+|..+|.+ .+....+||++|..|+.+++.++..    .  .+++|+  +     ||-...-+     .+     
T Consensus       397 lnf~~pD~~GH~~~~~~y~~aIe~vD~~lGrll~~Lk~~----g--TlIIiT--S-----DHG~~e~m-----~d-----  453 (511)
T 1o98_A          397 LNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAK----G--GIAIIT--A-----DHGNADEV-----LT-----  453 (511)
T ss_dssp             EEECHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHT----T--CEEEEE--C-----SSBSTTCC-----BC-----
T ss_pred             EeCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHC----C--CEEEEE--C-----CCCccccc-----cC-----
Confidence            9999999999988 4556679999999999999887541    1  344555  2     44310000     01     


Q ss_pred             ccCCceeEeeCCC-CCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHHHHhcCC
Q 027156          151 LFPRQSYTMKGET-PRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKA  222 (227)
Q Consensus       151 l~P~QSy~~k~~~-~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evafkL~ka  222 (227)
                        |       .|+ ...|++.+||+++  +.+. .+      +.     +.     ....++++.++..+|..
T Consensus       454 --~-------~Gk~~t~ht~~~VPlIi--~~pg-i~------~~-----~~-----~sl~DIaPTIL~llGi~  498 (511)
T 1o98_A          454 --P-------DGKPQTAHTTNPVPVIV--TKKG-IK------LR-----DG-----GILGDLAPTMLDLLGLP  498 (511)
T ss_dssp             --T-------TSCBCCSCBCCCEEEEE--CCTT-CC------BC-----SS-----EEGGGHHHHHHHHHTCC
T ss_pred             --C-------CCCcccCCCCeEEEEEE--EECC-cc------cC-----CC-----eEeHHHHHHHHHHhCcC
Confidence              1       111 2347899999999  5442 22      22     12     23459999999999864

>1zed_A Alkaline phosphatase; phosphoserine, substrate analog, hydro; HET: NAG PNP; 1.57A {Homo sapiens} SCOP: c.76.1.1 PDB: 1zeb_A* 1zef_A* 2glq_A* 3mk0_A* 3mk1_A* 3mk2_A* 1ew2_A*

Probab=97.16  E-value=0.00076  Score=64.50  Aligned_cols=60  Identities=7%  Similarity=0.077  Sum_probs=51.2

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCcccEEEEecc--CCCccCccc-chhhhhhhHHHHHHHHHHHHhcCC
Q 027156           40 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG--AGEKTNDDK-GKAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        40 ~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~--a~d~a~h~g-~~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      .++...+.+++|++|.         +++|..||||+  ..|.++|.+ ...+...++.+|+.|+.+++..++
T Consensus       285 ~P~L~emt~~ai~~L~---------~~~~Gffl~veg~~iD~~gH~~d~~~~~~~~~~fD~al~~~~~~~~~  347 (484)
T 1zed_A          285 DPSLMEMTEAALRLLS---------RNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTSE  347 (484)
T ss_dssp             CCCHHHHHHHHHHHHT---------TCTTCEEEEEEETTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred             CCCHHHHHHHHHHHHH---------hcCCcEEEEecccCcchhhhcCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            5679999999999993         56899999999  888999998 555666999999999999988654

>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}

Probab=96.58  E-value=0.0043  Score=53.74  Aligned_cols=102  Identities=10%  Similarity=0.050  Sum_probs=63.6

Q ss_pred             CcccEEEEeccCCCc-cCccc-chhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCCcceeeccc
Q 027156           65 SQFDLVLVHIGAGEK-TNDDK-GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISID  142 (227)
Q Consensus        65 ~~~DlVfvHv~a~d~-a~h~g-~~~~~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~yg~~~~~d~~~~~vl~~~~  142 (227)
                      ..+++++.+...++. .+|.+ .+.....||++|..||+|++.++.     +  .+++||  +     ||-         
T Consensus       287 ~~~~~~~~~~~~~d~~~~~~~~~~~y~~~i~~~D~~vg~~l~~L~e-----n--tliift--s-----DnG---------  343 (413)
T 3m7v_A          287 FTKGFSFTNLVDFDALYGHRRNAHGYRDCLHEFDERLPEIIAAMKV-----D--DLLLIT--A-----DHG---------  343 (413)
T ss_dssp             CCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHTCCT-----T--EEEEEE--C-----SSB---------
T ss_pred             cccccceecccccchhhhcchhHHHHHHHHHHHHhHHHHHHHhcCC-----C--CEEEEE--c-----cCC---------
Confidence            667888888776653 45555 445566999999999999999763     2  356666  2     442         


Q ss_pred             ccCCCCcCccCCceeEeeCCCCCCCcCCCccEEEEEccccceecCCCccCChHHHhhcCCccceeHHhHHHHHHHHhc
Q 027156          143 EKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLW  220 (227)
Q Consensus       143 ~~ds~~tpl~P~QSy~~k~~~~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evafkL~  220 (227)
                        . ++         .+. |  ..|++++||++++..+....+.+           .     ..-..++++-++..+|
T Consensus       344 --~-~~---------~~~-~--~~~~~~~vp~~~~~p~~~~~~~~-----------~-----~~~~~d~~pt~~~~~g  390 (413)
T 3m7v_A          344 --N-DP---------TYA-G--TDHTREYVPLLAYSPSFTGNGVL-----------P-----VGHYADISATIADNFG  390 (413)
T ss_dssp             --C-CT---------TSS-S--SSCBCBCEEEEEECTTCSCCEEC-----------C-----CEETTHHHHHHHHHHT
T ss_pred             --C-CC---------CCC-C--CCCCCeeEEEEEEECCCCCCCcC-----------C-----CcEEehHHHHHHHHcC
Confidence              1 11         111 1  23778899999944432112211           1     1233589999998877

>3tg0_A Apase, alkaline phosphatase; hydrolase; 1.20A {Escherichia coli} SCOP: c.76.1.1 PDB: 1b8j_A 1ed9_A 1ew8_A 1ew9_A 1ed8_A 1y6v_A 3bdg_B 1elx_A 2g9y_A 2ga3_A* 3bdh_A 3cmr_A 1elz_A 1hjk_A* 1hqa_A 1ely_A 3dyc_A 1ali_A 1alj_A 3bdf_A ...

Probab=96.21  E-value=0.0065  Score=57.68  Aligned_cols=138  Identities=12%  Similarity=0.119  Sum_probs=83.6

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCccc--EEEEeccCCCccCcccchh-hhhhhHHHHHHHHHHHHhcCCCcccCcce
Q 027156           40 GSPIDVVASELLKLLGLQRGKMEEVSQFD--LVLVHIGAGEKTNDDKGKA-VAHDLEYINALVRVILQMAQPATEVGSRL  116 (227)
Q Consensus        40 ~~~~~~~a~~al~lLg~~e~~~~~~~~~D--lVfvHv~a~d~a~h~g~~~-~~~~iE~iD~lvg~il~~~~~~~~~~~~~  116 (227)
                      .+......+++|++|.         ++.+  |+||+-+..|.++|.+... ....++.+|+.|+.+++.++..   .+  
T Consensus       296 ~PsL~eMT~kAi~~L~---------~~~~GfFl~VEg~~iD~a~H~nd~~~~~~e~~~fD~av~~a~~~~~~~---~d--  361 (449)
T 3tg0_A          296 VPTLAQMTDKAIELLS---------KNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKE---GN--  361 (449)
T ss_dssp             SCCHHHHHHHHHHHHT---------TCSSCEEEEEEETHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH---SS--
T ss_pred             CCCHHHHHHHHHHHHh---------hCCCcEEEEEeccccchhhccCCHHHHHHHHHHHHHHHHHHHHHHhcC---CC--
Confidence            4568889999999992         3445  5666666699999999554 4559999999999999876421   02  


Q ss_pred             EEEEEEeccccccccCCC-cceeecccc----------cCCCCcCccCCceeEeeCCCCCCCcCCCccEEEEEcccccee
Q 027156          117 HLSVVLSYGQVLEADNSN-LSVLISIDE----------KSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTR  185 (227)
Q Consensus       117 ~~s~V~~yg~~~~~d~~~-~~vl~~~~~----------~ds~~tpl~P~QSy~~k~~~~~~~~r~pvP~li~~~~~~~tR  185 (227)
                      .++||+  .     ||+. +.++.-...          .|-.+..    -+|.--.-..-+|+...||+..++++.    
T Consensus       362 TLiiVT--A-----DH~~~~~~~g~~~~~~g~~~~~~~~dg~~~~----l~y~~g~~~se~HtG~dV~v~A~GP~A----  426 (449)
T 3tg0_A          362 TLVIVT--A-----DHAHASQIVAPDTKAPGLTQALNTKDGAVMV----MSYGNSEEDSQEHTGSQLRIAAYGPHA----  426 (449)
T ss_dssp             EEEEEE--C-----SSBCSCEEECTTCCCSSEEEEEECTTSSEEE----EEECSCSSSSCCCBCCCEEEEEESTTG----
T ss_pred             cEEEEe--C-----CCCCcccccCCCCCCcccccccccCCCCeee----eecccCCCCCCCcCCceeeEEeecCCh----
Confidence            466666  3     6762 222221100          0100000    012211123356999999999966643    


Q ss_pred             cCCCccCChHHHhhcCCccceeHHhHHHHHHHHhc
Q 027156          186 KDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLW  220 (227)
Q Consensus       186 ~D~v~~Fse~e~~k~Gg~g~I~~~~~m~evafkL~  220 (227)
                          +.|          -|.+.-..+.|.|+.-|+
T Consensus       427 ----~~f----------~G~~eqt~i~~~m~~al~  447 (449)
T 3tg0_A          427 ----ANV----------VGLTDQTDLFYTMKAALG  447 (449)
T ss_dssp             ----GGG----------SEEEEHHHHHHHHHHHTT
T ss_pred             ----hhc----------CcceeccHHHHHHHHHhC
Confidence                122          235777777777777665

>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B

Probab=94.94  E-value=0.056  Score=48.54  Aligned_cols=133  Identities=10%  Similarity=0.112  Sum_probs=72.6

Q ss_pred             HHHHHHHHHhccccCcccccCcccEEEEeccCCCccCcccchhh-hhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEe
Q 027156           45 VVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAV-AHDLEYINALVRVILQMAQPATEVGSRLHLSVVLS  123 (227)
Q Consensus        45 ~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~h~g~~~~-~~~iE~iD~lvg~il~~~~~~~~~~~~~~~s~V~~  123 (227)
                      ....++++.|.  +     ..+.-|+++.....|..+|.+.... ...|+.+|..||.|++.++..   + + .+++|+|
T Consensus       233 ~~~~~ai~~i~--~-----~~kpFfl~~~~~~~d~~~h~~~~~~~~~~v~~~D~~vG~il~~L~~~---g-n-Tlvifts  300 (375)
T 2w5v_A          233 AATDLAIQFLS--K-----DNSAFFIMSEGSQIDWGGHANNASYLISEINDFDDAIGTALAFAKKD---G-N-TLVIVTS  300 (375)
T ss_dssp             HHHHHHHHHHT--G-----GGCCEEEEEEETTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH---S-S-EEEEEEC
T ss_pred             HHHHHHHHHhh--h-----CCCceEEEeecCcCChhhcCccHHHHHHHHHHHHHHHHHHHHHHhhC---C-C-EEEEEEC
Confidence            45678888882  0     0112255554444555666554444 669999999999999887642   1 2 4666662


Q ss_pred             ccccccccCC--CcceeecccccCCCCcCccCCceeEeeCCC------CCCCcCCCccEEEEEccccceecCCCccCChH
Q 027156          124 YGQVLEADNS--NLSVLISIDEKSSDLSALFPRQSYTMKGET------PRNDVRHHCPMLISQWQYAVTRKDMAETFSFK  195 (227)
Q Consensus       124 yg~~~~~d~~--~~~vl~~~~~~ds~~tpl~P~QSy~~k~~~------~~~~~r~pvP~li~~~~~~~tR~D~v~~Fse~  195 (227)
                             ||.  ...+-....... ..+       .-++.+|      ...|.+.+||+++  +.+...+      +   
T Consensus       301 -------DhG~Gg~~~g~~~~~~~-~~~-------~~~~~~K~~~~~~~~~e~g~rVP~iv--~~Pg~~~------~---  354 (375)
T 2w5v_A          301 -------DHETGGFTLAAKKNKRE-DGS-------EYSDYTEIGPTFSTGGHSATLIPVFA--YGPGSEE------F---  354 (375)
T ss_dssp             -------SCEETTCBCBEEEEECS-SSC-------EEEEEEEECCBCSCSSEECCCEEEEE--ESTTGGG------G---
T ss_pred             -------cCCCCCcccCCCCcccc-cCc-------ccccCCccccCcCCCCCCCcEeEEEE--ECCCccc------c---
Confidence                   441  110000000000 000       0122222      2357899999999  4442211      1   


Q ss_pred             HHhhcCCccceeHHhHHHHHHHHhcCC
Q 027156          196 DFKEHGGYLTIPADRFLHEVAFKLWKA  222 (227)
Q Consensus       196 e~~k~Gg~g~I~~~~~m~evafkL~ka  222 (227)
                             .+.+...++++.++..+|-.
T Consensus       355 -------~~~v~~~Di~pTll~~agi~  374 (375)
T 2w5v_A          355 -------IGIYENNEIFHKILKVTKWN  374 (375)
T ss_dssp             -------CEEEETTHHHHHHHHHHCCC
T ss_pred             -------CCceehhHHHHHHHHHhCCC
Confidence                   13577889999999987753

>3q3q_A Alkaline phosphatase; hydrolase; 1.95A {Sphingomonas SP}

Probab=91.40  E-value=0.13  Score=49.82  Aligned_cols=43  Identities=9%  Similarity=0.218  Sum_probs=37.5

Q ss_pred             CcccEEEEeccCCCccCccc---chhhhhhhHHHHHHHHHHHHhcC
Q 027156           65 SQFDLVLVHIGAGEKTNDDK---GKAVAHDLEYINALVRVILQMAQ  107 (227)
Q Consensus        65 ~~~DlVfvHv~a~d~a~h~g---~~~~~~~iE~iD~lvg~il~~~~  107 (227)
                      .+.||++||+...|..+|.-   ..+-...++++|+.|+.+++.++
T Consensus       287 ~~pdll~vy~~~~D~~gH~~Gp~S~e~~~~l~~lD~~lg~Ll~~l~  332 (565)
T 3q3q_A          287 AQTDIISIGLSATDYVGHTFGTEGTESCIQVDRLDTELGAFFDKLD  332 (565)
T ss_dssp             SSCEEEEEEECHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999962   56677799999999999998875

>3a52_A Cold-active alkaline phosphatase; hydrolase; 2.20A {Shewanella}

Probab=90.00  E-value=0.57  Score=43.45  Aligned_cols=70  Identities=17%  Similarity=0.195  Sum_probs=49.1

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCccc-EEEEeccCCCccCcccchhhh-hhhHHHHHHHHHHHHhcCCCcccCcceE
Q 027156           40 GSPIDVVASELLKLLGLQRGKMEEVSQFD-LVLVHIGAGEKTNDDKGKAVA-HDLEYINALVRVILQMAQPATEVGSRLH  117 (227)
Q Consensus        40 ~~~~~~~a~~al~lLg~~e~~~~~~~~~D-lVfvHv~a~d~a~h~g~~~~~-~~iE~iD~lvg~il~~~~~~~~~~~~~~  117 (227)
                      .+......++||+.|.        .++-= |+||--...|.++|...-... ..+..+|+.|+.+++.++..   .+  -
T Consensus       196 ~PsL~emT~kAI~~L~--------kn~~GFFLmVEgg~ID~a~H~nd~~~al~e~~~fD~AV~~al~~~~~~---~d--T  262 (400)
T 3a52_A          196 ANTLSKLTQKSLDLLS--------QNEKGFVLLVEGSLIDWAGHNNDIATAMAEMQGFANAIEVVEQYIRQH---PD--T  262 (400)
T ss_dssp             SCHHHHHHHHHHHHHT--------TCTTCEEEEEEETHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHC---CS--E
T ss_pred             CCCHHHHHHHHHHHHH--------hCCCCeEEEecCccCchhhhhCcHHHHHHHHHHHHHHHHHHHHHHhcC---CC--c
Confidence            3445667899999993        01222 888888888889998744443 38899999999999887531   13  4


Q ss_pred             EEEEE
Q 027156          118 LSVVL  122 (227)
Q Consensus       118 ~s~V~  122 (227)
                      ++|||
T Consensus       263 LIIVT  267 (400)
T 3a52_A          263 LLVVT  267 (400)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            66777

>1k7h_A Alkaline phosphatase; hydrolase, transferase, phosphomonoester, extended beta SHEE triad, metal triad; HET: NAG; 1.92A {Pandalus borealis} SCOP: c.76.1.1 PDB: 1shq_A* 1shn_A*

Probab=89.90  E-value=0.81  Score=43.55  Aligned_cols=61  Identities=13%  Similarity=0.195  Sum_probs=47.8

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCccc-EEEEeccCCCccCcccchhhh-hhhHHHHHHHHHHHHhcCC
Q 027156           40 GSPIDVVASELLKLLGLQRGKMEEVSQFD-LVLVHIGAGEKTNDDKGKAVA-HDLEYINALVRVILQMAQP  108 (227)
Q Consensus        40 ~~~~~~~a~~al~lLg~~e~~~~~~~~~D-lVfvHv~a~d~a~h~g~~~~~-~~iE~iD~lvg~il~~~~~  108 (227)
                      .+......+++|++|.        ...-= |+||.-...|.++|...-... ..++.+|..|+.+++.+++
T Consensus       284 ~PsL~eMT~~ai~~L~--------~~~~GFfl~vE~~~iD~~gH~~d~~~~~~e~~~fD~av~~~~~~~~~  346 (476)
T 1k7h_A          284 DPTLPEMTKVAIEMLT--------KDENGFFLLVEGGRIDHMHHANQIRQSLAETLDMEEAVSMALSMTDP  346 (476)
T ss_dssp             SCCHHHHHHHHHHHHT--------TCTTCEEEEEEECHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred             CCCHHHHHHHHHHHHH--------hCCCceEEEecccccchhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            4567889999999993        12223 888988888999998754444 4999999999999999865

>3nkq_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2; lysophospholipase D, autotaxin, ENPP2, lysophosphatidic acid hydrolase; HET: NAG BMA MAN NKQ; 1.70A {Mus musculus} PDB: 3nkm_A* 3nkn_A* 3nkp_A* 3nko_A* 3nkr_A* 2xrg_A* 2xr9_A*

Probab=88.25  E-value=0.45  Score=47.87  Aligned_cols=62  Identities=13%  Similarity=0.135  Sum_probs=48.7

Q ss_pred             ChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccCccc---chhhhhhhHHHHHHHHHHHHhcCC
Q 027156           42 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDK---GKAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        42 ~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~h~g---~~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      .++..+..+++.|...+     ..+.+|+++|+...|.++|.-   ..+-..+|+++|..||.|++.++.
T Consensus       245 ~~~~~v~~~~~~l~~~~-----~~~P~f~~ly~~~~D~~gH~~Gp~s~ey~~al~~vD~~IG~Ll~~Lk~  309 (831)
T 3nkq_A          245 PHERRILTILQWLSLPD-----NERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQ  309 (831)
T ss_dssp             CHHHHHHHHHHHHTSCT-----TTCCSEEEEEEEEEHHHHHHHCTTCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhccc-----ccCCceEEEecCCcchhccccCCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence            57788888888884322     257899999999999988853   345566999999999999988754

>4gtw_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2, alkaline phosphodiesterase...; bone mineralization, hydrolase; HET: NAG BMA MAN AMP; 2.70A {Mus musculus} PDB: 4gtx_A* 4gty_A* 4gtz_A* 4b56_A*

Probab=85.90  E-value=0.84  Score=45.58  Aligned_cols=63  Identities=13%  Similarity=0.220  Sum_probs=48.8

Q ss_pred             CChhHHHHHHHHHhccccCcccccCcccEEEEeccCCCccCccc---chhhhhhhHHHHHHHHHHHHhcCC
Q 027156           41 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDK---GKAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        41 ~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~h~g---~~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      ..++..+.++++.|...     +..+.+|+++|...+|.++|.-   ..+-..+|+++|..||.|++.++.
T Consensus       244 ~~~~~~~~~~~~~l~~~-----~~~~P~fl~~y~~~pD~~gH~~Gp~s~e~~~~i~~vD~~IG~ll~~L~~  309 (823)
T 4gtw_A          244 VPFEERILAVLEWLQLP-----SHERPHFYTLYLEEPDSSGHSHGPVSSEVIKALQKVDRLVGMLMDGLKD  309 (823)
T ss_dssp             SCHHHHHHHHHHHTTSC-----TTTCCSEEEEEECTTHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhc-----ccCCCeEEEECCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35677888899888533     3367899999999999888752   345556899999999999987653

>3szy_A Phosphonoacetate hydrolase; alkaline phosphatase superfamily; 1.35A {Sinorhizobium meliloti} SCOP: c.76.1.0 PDB: 3szz_A 3t00_A 3t01_A 3t02_A

Probab=83.08  E-value=1.3  Score=40.95  Aligned_cols=49  Identities=10%  Similarity=0.069  Sum_probs=37.3

Q ss_pred             HHHHHHHhccccCcccccCcccEEEEeccCCCccCcc-c--chhhhhhhHHHHHHHHHHHHh
Q 027156           47 ASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDD-K--GKAVAHDLEYINALVRVILQM  105 (227)
Q Consensus        47 a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a~h~-g--~~~~~~~iE~iD~lvg~il~~  105 (227)
                      +..+++++        +..+.||+++|  ..|.++|. |  .++-..+++.+|++|+.|++.
T Consensus       193 ~~~a~~~~--------~~~~p~l~y~~--~~D~~gH~~G~~s~~~~~~~~~~D~~l~~l~~~  244 (427)
T 3szy_A          193 FAAGVKLL--------REFRPDIMYLT--TTDYVQHKYAPGVPEANSFYEMFDRYLAELDGL  244 (427)
T ss_dssp             HHHHHHHH--------HHTCCSEEEEE--CCCHHHHHCCTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHH--------HhcCCCEEEEc--ccchhhccCCCCcHHHHHHHHHHHHHHHHHHhC
Confidence            45555555        23678998765  78999996 5  457777999999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	227
d2i09a1	283	Phosphopentomutase DeoB {Streptococcus mutans [Tax	94.91
d1y6va1	449	Alkaline phosphatase {Escherichia coli [TaxId: 562	84.47
d1j8yf2	211	GTPase domain of the signal sequence recognition p	83.12

>d2i09a1 c.76.1.5 (A:2-107,A:227-403) Phosphopentomutase DeoB {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: Alkaline phosphatase-like
superfamily: Alkaline phosphatase-like
family: DeoB catalytic domain-like
domain: Phosphopentomutase DeoB
species: Streptococcus mutans [TaxId: 1309]

Probab=94.91  E-value=0.13  Score=38.45  Aligned_cols=59  Identities=8%  Similarity=0.067  Sum_probs=38.0

Q ss_pred             hHHHHHHHHHhccccCcccccCcccEEEEeccCCCcc-Cccc-chhhhhhhHHHHHHHHHHHHhcCC
Q 027156           44 DVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKT-NDDK-GKAVAHDLEYINALVRVILQMAQP  108 (227)
Q Consensus        44 ~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv~a~d~a-~h~g-~~~~~~~iE~iD~lvg~il~~~~~  108 (227)
                      .....++++.+.      ....+..|+++|+...|.. +|.. ...-...|+++|..||+|++.++.
T Consensus       150 ~~~~d~~~~~~~------~~~~~~~~~~~~~~~~d~~~~~~~~~~~y~~~i~~~D~~iG~il~~L~~  210 (283)
T d2i09a1         150 SHGVDTLIKTMG------LSAFTKGFSFTNLVDFDALYGHRRNAHGYRDCLHEFDERLPEIIAAMKV  210 (283)
T ss_dssp             HHHHHHHHHHHH------CSSCCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred             HHHHHHHHHHHH------hcCCCcceeecccCCcccccCcCccHHHHHHHHHHHHHHhhhhhhhhcc
Confidence            334566666662      1124567888998776543 2221 333445799999999999999865

>d1y6va1 c.76.1.1 (A:1-449) Alkaline phosphatase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Alkaline phosphatase-like
superfamily: Alkaline phosphatase-like
family: Alkaline phosphatase
domain: Alkaline phosphatase
species: Escherichia coli [TaxId: 562]

Probab=84.47  E-value=1.7  Score=38.66  Aligned_cols=137  Identities=12%  Similarity=0.122  Sum_probs=79.0

Q ss_pred             CChhHHHHHHHHHhccccCcccccCccc--EEEEeccCCCccCcccchhh-hhhhHHHHHHHHHHHHhcCCCcccCcceE
Q 027156           41 SPIDVVASELLKLLGLQRGKMEEVSQFD--LVLVHIGAGEKTNDDKGKAV-AHDLEYINALVRVILQMAQPATEVGSRLH  117 (227)
Q Consensus        41 ~~~~~~a~~al~lLg~~e~~~~~~~~~D--lVfvHv~a~d~a~h~g~~~~-~~~iE~iD~lvg~il~~~~~~~~~~~~~~  117 (227)
                      +......++||+.|.         ++-+  |++|==+..|.++|...-.. ...+..+|..|+.+++..+..    . ..
T Consensus       297 PtL~eMt~~AL~~L~---------kn~kGFfLmVEgg~ID~a~H~n~~~~~l~e~~~fd~AV~~a~~~~~~~----~-dT  362 (449)
T d1y6va1         297 PTLAQMTDKAIELLS---------KNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKE----G-NT  362 (449)
T ss_dssp             CCHHHHHHHHHHHHT---------TCTTCEEEEEEETHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH----S-SE
T ss_pred             CCHHHHHHHHHHHHh---------cCCCccEEEeeccccchhhhcCCHHHHHHHHHHHHHHHHHHHHHhccC----C-Ce
Confidence            457789999999993         2223  33344444567778764333 337778999999988776431    1 25


Q ss_pred             EEEEEeccccccccCCCcc-eee----------cccccCCCCcCccCCceeEeeCCCCCCCcCCCccEEEEEccccceec
Q 027156          118 LSVVLSYGQVLEADNSNLS-VLI----------SIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRK  186 (227)
Q Consensus       118 ~s~V~~yg~~~~~d~~~~~-vl~----------~~~~~ds~~tpl~P~QSy~~k~~~~~~~~r~pvP~li~~~~~~~tR~  186 (227)
                      ++|||  .     ||...- ++.          .....+   .+ .+..+|.--.-..-+|+..+||+...+.+.  .+ 
T Consensus       363 LiIVT--A-----DH~~g~~~~g~~~~~~~~~~~~~~~~---g~-~~~~~y~~~~~~s~~Htg~dVpv~A~GpgA--~~-  428 (449)
T d1y6va1         363 LVIVT--A-----DHAHASQIVAPDTKAPGLTQALNTKD---GA-VMVMSYGNSEEDSQEHTGSQLRIAAYGPHA--AN-  428 (449)
T ss_dssp             EEEEE--C-----SSBCSCEEECTTCCCSSEEEEEECTT---SS-EEEEEECSCSSSSCCCBCCCEEEEEESTTG--GG-
T ss_pred             EEEEE--c-----ccCCCccccCCCCCCCccccccccCC---Cc-ceEEEeccCCCCCCCccCceeeeEEECCCc--cc-
Confidence            77777  2     554211 111          011111   11 233444322223356999999999854432  11 


Q ss_pred             CCCccCChHHHhhcCCccceeHHhHHHHHHHHhc
Q 027156          187 DMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLW  220 (227)
Q Consensus       187 D~v~~Fse~e~~k~Gg~g~I~~~~~m~evafkL~  220 (227)
                           |          .|.+.-.++.+.|+.-||
T Consensus       429 -----f----------~G~~dnT~I~~~m~~alg  447 (449)
T d1y6va1         429 -----V----------VGLTDQTDLFYTMKAALG  447 (449)
T ss_dssp             -----G----------SEEEEHHHHHHHHHHHTT
T ss_pred             -----c----------CccCcchHHHHHHHHHhC
Confidence                 2          236788888888888776

>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: GTPase domain of the signal sequence recognition protein Ffh
species: Archaeon Acidianus ambivalens [TaxId: 2283]

Probab=83.12  E-value=4.9  Score=31.83  Aligned_cols=58  Identities=14%  Similarity=0.318  Sum_probs=38.2

Q ss_pred             CCceeEEec-------CchhhhhhhhhcceEeecCCcccccCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEec
Q 027156            2 GLKAALITT-------NSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHI   74 (227)
Q Consensus         2 glkaA~It~-------~~llkg~g~~~G~~v~~~~g~tg~~dt~~~~~~~~~a~~al~lLg~~e~~~~~~~~~DlVfvHv   74 (227)
                      |.|-++||.       .+.|+.+|+.+|..+..++     .    ..+....+.+++...        ...++|+|||..
T Consensus        40 g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~-----~----~~~~~~~~~~a~~~~--------~~~~~d~IlIDT  102 (211)
T d1j8yf2          40 GFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEP-----G----EKDVVGIAKRGVEKF--------LSEKMEIIIVDT  102 (211)
T ss_dssp             TCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCT-----T----CCCHHHHHHHHHHHH--------HHTTCSEEEEEC
T ss_pred             CCceEEEEeeccccchhHHHHHhccccCcceeecc-----c----chhhhHHHHHHHHHh--------hccCCceEEEec
Confidence            556667764       5788999999999997652     1    123445555555443        126789999984


Q ss_pred             cC
Q 027156           75 GA   76 (227)
Q Consensus        75 ~a   76 (227)
                      .+
T Consensus       103 aG  104 (211)
T d1j8yf2         103 AG  104 (211)
T ss_dssp             CC
T ss_pred             CC
Confidence            43