Citrus Sinensis ID: 027317
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 225 | ||||||
| 4090533 | 318 | ACC oxidase [Carica papaya] gi|38141531| | 1.0 | 0.707 | 0.88 | 1e-117 | |
| 73761685 | 319 | ACC oxidase 1 [Gossypium hirsutum] | 0.991 | 0.699 | 0.887 | 1e-117 | |
| 14211818 | 318 | ACC oxidase [Carica papaya] gi|42491583| | 1.0 | 0.707 | 0.88 | 1e-117 | |
| 7595984 | 318 | ACC oxidase [Carica papaya] | 1.0 | 0.707 | 0.871 | 1e-117 | |
| 54606509 | 318 | 1-aminocyclopropane-1-carboxylate oxidas | 1.0 | 0.707 | 0.875 | 1e-116 | |
| 117957299 | 312 | 1-amino-cyclopropane-1-carboxylic acid o | 1.0 | 0.721 | 0.875 | 1e-116 | |
| 17224932 | 318 | 1-aminocyclopropane-1-carboxylate oxidas | 1.0 | 0.707 | 0.866 | 1e-115 | |
| 224113841 | 318 | 1-aminocyclopropane-1-carboxylate [Popul | 1.0 | 0.707 | 0.862 | 1e-114 | |
| 429142526 | 326 | ACC oxidase [Boehmeria nivea] | 0.991 | 0.684 | 0.856 | 1e-114 | |
| 224117980 | 318 | 1-aminocyclopropane-1-carboxylate [Popul | 1.0 | 0.707 | 0.866 | 1e-114 |
| >gi|4090533|gb|AAC98808.1| ACC oxidase [Carica papaya] gi|38141531|emb|CAE53415.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] gi|54888572|emb|CAH68522.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] | Back alignment and taxonomy information |
|---|
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/225 (88%), Positives = 217/225 (96%)
Query: 1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
MENFP+IDLSKLNG+ER++TME+I+DACENWGFFELVNHGISH+L+DTV+RLTKEHY KC
Sbjct: 1 MENFPVIDLSKLNGEERASTMELIHDACENWGFFELVNHGISHDLMDTVERLTKEHYKKC 60
Query: 61 MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVE 120
M+QRFK+MV S GLEAVQSE+ND+DWESTFFLRHLP SNM EIPDLEDDYRKAMKEFAV
Sbjct: 61 MEQRFKEMVESNGLEAVQSEINDMDWESTFFLRHLPASNMHEIPDLEDDYRKAMKEFAVG 120
Query: 121 LEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 180
L+K+AEQ+L+LLCENLGLE+GYLKKVFYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDA
Sbjct: 121 LQKLAEQMLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 180
Query: 181 GGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVIN 225
GGIILLFQDD+VSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVI
Sbjct: 181 GGIILLFQDDKVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVIT 225
|
Source: Carica papaya Species: Carica papaya Genus: Carica Family: Caricaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|73761685|gb|AAZ83342.1| ACC oxidase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
| >gi|14211818|gb|AAK57516.1| ACC oxidase [Carica papaya] gi|42491583|gb|AAS16933.1| 1-aminocyclopropane-1-carboxylate oxidase 1 [Carica papaya] gi|51243480|gb|AAT99444.1| ripening related ACC oxidase 1 [Carica papaya] | Back alignment and taxonomy information |
|---|
| >gi|7595984|gb|AAF64528.1|AF254125_1 ACC oxidase [Carica papaya] | Back alignment and taxonomy information |
|---|
| >gi|54606509|emb|CAH64841.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] | Back alignment and taxonomy information |
|---|
| >gi|117957299|gb|ABK59094.1| 1-amino-cyclopropane-1-carboxylic acid oxidase 3 [Manihot esculenta] | Back alignment and taxonomy information |
|---|
| >gi|17224932|gb|AAL37174.1|AF320071_1 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] | Back alignment and taxonomy information |
|---|
| >gi|224113841|ref|XP_002316589.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] gi|222859654|gb|EEE97201.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|429142526|gb|AFZ76981.1| ACC oxidase [Boehmeria nivea] | Back alignment and taxonomy information |
|---|
| >gi|224117980|ref|XP_002331528.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] gi|222873752|gb|EEF10883.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 225 | ||||||
| TAIR|locus:2205568 | 323 | EFE "ethylene-forming enzyme" | 0.995 | 0.693 | 0.691 | 2.6e-86 | |
| TAIR|locus:2027099 | 320 | ACO2 "ACC oxidase 2" [Arabidop | 0.982 | 0.690 | 0.638 | 2.2e-80 | |
| TAIR|locus:2008905 | 320 | AT1G12010 [Arabidopsis thalian | 0.982 | 0.690 | 0.647 | 7.6e-80 | |
| TAIR|locus:2050364 | 310 | ACO1 "ACC oxidase 1" [Arabidop | 0.986 | 0.716 | 0.433 | 2.1e-52 | |
| TAIR|locus:2031422 | 307 | AT1G77330 [Arabidopsis thalian | 0.951 | 0.697 | 0.452 | 1.6e-45 | |
| TAIR|locus:2169697 | 371 | AT5G05600 [Arabidopsis thalian | 0.982 | 0.595 | 0.311 | 1.8e-30 | |
| TAIR|locus:2042942 | 353 | AT2G38240 [Arabidopsis thalian | 0.973 | 0.620 | 0.285 | 2.7e-29 | |
| TAIR|locus:2122679 | 353 | AT4G25310 [Arabidopsis thalian | 0.968 | 0.617 | 0.331 | 4.4e-29 | |
| TAIR|locus:2020407 | 358 | SRG1 "senescence-related gene | 0.973 | 0.611 | 0.315 | 9.1e-29 | |
| TAIR|locus:2153924 | 341 | DMR6 "DOWNY MILDEW RESISTANT 6 | 0.964 | 0.636 | 0.307 | 3.9e-28 |
| TAIR|locus:2205568 EFE "ethylene-forming enzyme" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 155/224 (69%), Positives = 190/224 (84%)
Query: 1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
ME+FPII+L KLNG+ER+ TME I DACENWGFFE VNHGIS ELLD V+++TKEHY KC
Sbjct: 1 MESFPIINLEKLNGEERAITMEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKC 60
Query: 61 MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVE 120
M++RFK+ + ++GL++++SEVND+DWESTF+L+HLPVSN++++PDL+DDYR MK+FA +
Sbjct: 61 MEERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDVPDLDDDYRTLMKDFAGK 120
Query: 121 LEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 180
+EK++ KKVFYGSK PTFGTKVSNYPPCP PDL+KGLRAHTDA
Sbjct: 121 IEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDA 180
Query: 181 GGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVI 224
GGIILLFQDD+VSGLQLLKD +WVDVPP+KHSIV+NLGDQLEVI
Sbjct: 181 GGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVI 224
|
|
| TAIR|locus:2027099 ACO2 "ACC oxidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2008905 AT1G12010 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2050364 ACO1 "ACC oxidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2031422 AT1G77330 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 225 | |||
| PLN02299 | 321 | PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl | 1e-169 | |
| PLN02403 | 303 | PLN02403, PLN02403, aminocyclopropanecarboxylate o | 7e-91 | |
| PLN02393 | 362 | PLN02393, PLN02393, leucoanthocyanidin dioxygenase | 4e-56 | |
| PLN03178 | 360 | PLN03178, PLN03178, leucoanthocyanidin dioxygenase | 1e-45 | |
| PLN02639 | 337 | PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy | 7e-45 | |
| PLN02758 | 361 | PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy | 2e-42 | |
| PLN02912 | 348 | PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy | 6e-39 | |
| PLN02704 | 335 | PLN02704, PLN02704, flavonol synthase | 1e-38 | |
| PLN02216 | 357 | PLN02216, PLN02216, protein SRG1 | 5e-38 | |
| PLN02254 | 358 | PLN02254, PLN02254, gibberellin 3-beta-dioxygenase | 4e-36 | |
| PLN02947 | 374 | PLN02947, PLN02947, oxidoreductase | 1e-35 | |
| PLN00417 | 348 | PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy | 1e-34 | |
| COG3491 | 322 | COG3491, PcbC, Isopenicillin N synthase and relate | 5e-34 | |
| PLN02750 | 345 | PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy | 3e-33 | |
| PLN03001 | 262 | PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy | 1e-32 | |
| PLN02515 | 358 | PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di | 1e-31 | |
| PLN02276 | 361 | PLN02276, PLN02276, gibberellin 20-oxidase | 3e-27 | |
| PLN02997 | 325 | PLN02997, PLN02997, flavonol synthase | 3e-27 | |
| PLN02984 | 341 | PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy | 1e-26 | |
| PLN02904 | 357 | PLN02904, PLN02904, oxidoreductase | 2e-24 | |
| pfam14226 | 113 | pfam14226, DIOX_N, non-haem dioxygenase in morphin | 7e-24 | |
| PTZ00273 | 320 | PTZ00273, PTZ00273, oxidase reductase; Provisional | 1e-23 | |
| pfam03171 | 96 | pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe | 8e-19 | |
| PLN02365 | 300 | PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy | 2e-15 | |
| PLN02156 | 335 | PLN02156, PLN02156, gibberellin 2-beta-dioxygenase | 6e-14 | |
| PLN02485 | 329 | PLN02485, PLN02485, oxidoreductase | 5e-12 | |
| PLN03002 | 332 | PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy | 1e-10 | |
| PLN03176 | 120 | PLN03176, PLN03176, flavanone-3-hydroxylase; Provi | 9e-06 |
| >gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase | Back alignment and domain information |
|---|
Score = 468 bits (1207), Expect = e-169
Identities = 185/224 (82%), Positives = 214/224 (95%)
Query: 1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
ME+FP+ID+ KLNG+ER+ATME+I DACENWGFFELVNHGISHEL+D V+++TKEHY KC
Sbjct: 4 MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKC 63
Query: 61 MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVE 120
M+QRFK+MVASKGLE VQ+EV DLDWESTFFLRHLP SN+A+IPDL+D+YRK MK+FA+E
Sbjct: 64 MEQRFKEMVASKGLEGVQTEVEDLDWESTFFLRHLPESNLADIPDLDDEYRKVMKDFALE 123
Query: 121 LEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 180
LEK+AE+LL+LLCENLGLE+GYLKK F+GSKGPTFGTKVSNYPPCPKPDL+KGLRAHTDA
Sbjct: 124 LEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVSNYPPCPKPDLVKGLRAHTDA 183
Query: 181 GGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVI 224
GGIILLFQDD+VSGLQLLKD +WVDVPPM+HSIV+NLGDQLEVI
Sbjct: 184 GGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVI 227
|
Length = 321 |
| >gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase | Back alignment and domain information |
|---|
| >gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 | Back alignment and domain information |
|---|
| >gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase | Back alignment and domain information |
|---|
| >gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal | Back alignment and domain information |
|---|
| >gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 225 | |||
| PLN02299 | 321 | 1-aminocyclopropane-1-carboxylate oxidase | 100.0 | |
| COG3491 | 322 | PcbC Isopenicillin N synthase and related dioxygen | 100.0 | |
| PLN02216 | 357 | protein SRG1 | 100.0 | |
| PLN02997 | 325 | flavonol synthase | 100.0 | |
| PLN02912 | 348 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02403 | 303 | aminocyclopropanecarboxylate oxidase | 100.0 | |
| PLN02750 | 345 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN03178 | 360 | leucoanthocyanidin dioxygenase; Provisional | 100.0 | |
| PLN02254 | 358 | gibberellin 3-beta-dioxygenase | 100.0 | |
| PLN02276 | 361 | gibberellin 20-oxidase | 100.0 | |
| PLN02393 | 362 | leucoanthocyanidin dioxygenase like protein | 100.0 | |
| PLN02485 | 329 | oxidoreductase | 100.0 | |
| PLN00417 | 348 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02758 | 361 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PTZ00273 | 320 | oxidase reductase; Provisional | 100.0 | |
| PLN02639 | 337 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN03002 | 332 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02515 | 358 | naringenin,2-oxoglutarate 3-dioxygenase | 100.0 | |
| PLN02947 | 374 | oxidoreductase | 100.0 | |
| KOG0143 | 322 | consensus Iron/ascorbate family oxidoreductases [S | 100.0 | |
| PLN02704 | 335 | flavonol synthase | 100.0 | |
| PLN02904 | 357 | oxidoreductase | 100.0 | |
| PLN02156 | 335 | gibberellin 2-beta-dioxygenase | 100.0 | |
| PLN02984 | 341 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PLN02365 | 300 | 2-oxoglutarate-dependent dioxygenase | 100.0 | |
| PLN03001 | 262 | oxidoreductase, 2OG-Fe(II) oxygenase family protei | 100.0 | |
| PF14226 | 116 | DIOX_N: non-haem dioxygenase in morphine synthesis | 99.93 | |
| PLN03176 | 120 | flavanone-3-hydroxylase; Provisional | 99.82 | |
| PF03171 | 98 | 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent | 99.69 | |
| smart00702 | 178 | P4Hc Prolyl 4-hydroxylase alpha subunit homologues | 91.1 | |
| PF13640 | 100 | 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; | 85.57 | |
| PF07350 | 416 | DUF1479: Protein of unknown function (DUF1479); In | 81.43 |
| >PLN02299 1-aminocyclopropane-1-carboxylate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-65 Score=433.96 Aligned_cols=225 Identities=82% Similarity=1.387 Sum_probs=204.0
Q ss_pred CCCCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcCCHHHHhHhhhcCCCccccccc
Q 027317 1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSE 80 (225)
Q Consensus 1 m~~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~Gy~~~~~~ 80 (225)
|++||+|||+.+.+.++.+++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++....+||.++..+
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~gy~~~~~~ 83 (321)
T PLN02299 4 MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVASKGLEGVQTE 83 (321)
T ss_pred CCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccCCCCccccccc
Confidence 67899999999876667789999999999999999999999999999999999999999999999976667899887766
Q ss_pred ccCCCCccceeccccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCceeeeee
Q 027317 81 VNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVS 160 (225)
Q Consensus 81 ~~~~d~~e~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~ 160 (225)
....||+|.|.++..|..+.+.||+.+++||+.+++|+++|.+++.+||++++++||+++++|.+.+....++.+.+|++
T Consensus 84 ~~~~d~ke~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~ 163 (321)
T PLN02299 84 VEDLDWESTFFLRHLPESNLADIPDLDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVS 163 (321)
T ss_pred CCCcCHHHHcccccCCccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCccceeeeE
Confidence 66779999998876565566889998899999999999999999999999999999999999988776433345679999
Q ss_pred ecCCCCCCCCCCCccccccCCceeEEEeCCCCCceeEeeCCceEecCCCCCcEEEEhhhHhhhcC
Q 027317 161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVIN 225 (225)
Q Consensus 161 ~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~~~g~W~~v~p~~g~~vVnvGD~l~~~T 225 (225)
|||||+.++...|+++|||+|+||||+|++.++||||+++|+|++|+|.||++|||+||+||+||
T Consensus 164 ~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~T 228 (321)
T PLN02299 164 NYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVIT 228 (321)
T ss_pred ecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHh
Confidence 99999988777899999999999999996459999999899999999999999999999999998
|
|
| >COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02216 protein SRG1 | Back alignment and domain information |
|---|
| >PLN02997 flavonol synthase | Back alignment and domain information |
|---|
| >PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02403 aminocyclopropanecarboxylate oxidase | Back alignment and domain information |
|---|
| >PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN03178 leucoanthocyanidin dioxygenase; Provisional | Back alignment and domain information |
|---|
| >PLN02254 gibberellin 3-beta-dioxygenase | Back alignment and domain information |
|---|
| >PLN02276 gibberellin 20-oxidase | Back alignment and domain information |
|---|
| >PLN02393 leucoanthocyanidin dioxygenase like protein | Back alignment and domain information |
|---|
| >PLN02485 oxidoreductase | Back alignment and domain information |
|---|
| >PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PTZ00273 oxidase reductase; Provisional | Back alignment and domain information |
|---|
| >PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02515 naringenin,2-oxoglutarate 3-dioxygenase | Back alignment and domain information |
|---|
| >PLN02947 oxidoreductase | Back alignment and domain information |
|---|
| >KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
| >PLN02704 flavonol synthase | Back alignment and domain information |
|---|
| >PLN02904 oxidoreductase | Back alignment and domain information |
|---|
| >PLN02156 gibberellin 2-beta-dioxygenase | Back alignment and domain information |
|---|
| >PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PLN02365 2-oxoglutarate-dependent dioxygenase | Back alignment and domain information |
|---|
| >PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein | Back alignment and domain information |
|---|
| >PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A | Back alignment and domain information |
|---|
| >PLN03176 flavanone-3-hydroxylase; Provisional | Back alignment and domain information |
|---|
| >PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit | Back alignment and domain information |
|---|
| >smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues | Back alignment and domain information |
|---|
| >PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A | Back alignment and domain information |
|---|
| >PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 225 | ||||
| 1w9y_A | 319 | The Structure Of Acc Oxidase Length = 319 | 1e-91 | ||
| 1gp5_A | 356 | Anthocyanidin Synthase From Arabidopsis Thaliana Co | 3e-20 | ||
| 2brt_A | 355 | Anthocyanidin Synthase From Arabidopsis Thaliana Co | 3e-20 | ||
| 1gp4_A | 356 | Anthocyanidin Synthase From Arabidopsis Thaliana (S | 1e-19 | ||
| 3oox_A | 312 | Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas | 9e-05 | ||
| 2bjs_A | 325 | Isopenicillin N Synthase C-Terminal Truncation Muta | 4e-04 | ||
| 1ips_A | 331 | Isopenicillin N Synthase From Aspergillus Nidulans | 4e-04 |
| >pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 | Back alignment and structure |
|
| >pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 | Back alignment and structure |
| >pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 | Back alignment and structure |
| >pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 | Back alignment and structure |
| >pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 | Back alignment and structure |
| >pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 | Back alignment and structure |
| >pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 225 | |||
| 1w9y_A | 319 | 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge | 1e-126 | |
| 1gp6_A | 356 | Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep | 1e-107 | |
| 1odm_A | 331 | Isopenicillin N synthase; antibiotic biosynthesis, | 1e-50 | |
| 1dcs_A | 311 | Deacetoxycephalosporin C synthase; ferrous oxygena | 3e-50 | |
| 3oox_A | 312 | Putative 2OG-Fe(II) oxygenase family protein; stru | 5e-46 | |
| 3on7_A | 280 | Oxidoreductase, iron/ascorbate family; structural | 6e-46 |
| >1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 | Back alignment and structure |
|---|
Score = 359 bits (923), Expect = e-126
Identities = 175/224 (78%), Positives = 206/224 (91%)
Query: 1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
MENFPII L K+NG ER+ATMEMI DACENWGFFELVNHGI E++DTV+++TK HY KC
Sbjct: 1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKC 60
Query: 61 MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVE 120
M+QRFK++VASK LE VQ+EV D+DWESTFFL+HLP+SN++E+PDL+++YR+ M++FA
Sbjct: 61 MEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKR 120
Query: 121 LEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 180
LEK+AE+LL+LLCENLGLE+GYLK FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDA
Sbjct: 121 LEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 180
Query: 181 GGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVI 224
GGIILLFQDD+VSGLQLLKD QW+DVPPM+HSIV+NLGDQLEVI
Sbjct: 181 GGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVI 224
|
| >1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 | Back alignment and structure |
|---|
| >1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 | Back alignment and structure |
|---|
| >1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 | Back alignment and structure |
|---|
| >3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 | Back alignment and structure |
|---|
| >3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 225 | |||
| 1w9y_A | 319 | 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge | 100.0 | |
| 3oox_A | 312 | Putative 2OG-Fe(II) oxygenase family protein; stru | 100.0 | |
| 1gp6_A | 356 | Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep | 100.0 | |
| 1odm_A | 331 | Isopenicillin N synthase; antibiotic biosynthesis, | 100.0 | |
| 1dcs_A | 311 | Deacetoxycephalosporin C synthase; ferrous oxygena | 100.0 | |
| 3on7_A | 280 | Oxidoreductase, iron/ascorbate family; structural | 100.0 | |
| 3itq_A | 216 | Prolyl 4-hydroxylase, alpha subunit domain protei; | 86.25 | |
| 2jig_A | 224 | Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { | 83.12 | |
| 3dkq_A | 243 | PKHD-type hydroxylase SBAL_3634; putative oxygenas | 80.56 |
| >1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-67 Score=444.30 Aligned_cols=225 Identities=78% Similarity=1.345 Sum_probs=206.1
Q ss_pred CCCCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcCCHHHHhHhhhcCCCccccccc
Q 027317 1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSE 80 (225)
Q Consensus 1 m~~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~Gy~~~~~~ 80 (225)
|++||||||+.+.+.++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....+||.+++.+
T Consensus 1 m~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~Gy~~~~~e 80 (319)
T 1w9y_A 1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAE 80 (319)
T ss_dssp -CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCccccc
Confidence 88999999999875668899999999999999999999999999999999999999999999999976556799888777
Q ss_pred ccCCCCccceeccccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCceeeeee
Q 027317 81 VNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVS 160 (225)
Q Consensus 81 ~~~~d~~e~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~ 160 (225)
.+..||+|.|+++..|...+|.||+.+++||+.+++|+++|.+++.+||++|+++||+++++|.+.+...+++.+.+|++
T Consensus 81 ~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~ 160 (319)
T 1w9y_A 81 VTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVS 160 (319)
T ss_dssp GGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEE
T ss_pred CCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEE
Confidence 77889999999876666667899999999999999999999999999999999999999999999887533356789999
Q ss_pred ecCCCCCCCCCCCccccccCCceeEEEeCCCCCceeEeeCCceEecCCCCCcEEEEhhhHhhhcC
Q 027317 161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVIN 225 (225)
Q Consensus 161 ~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~~~g~W~~v~p~~g~~vVnvGD~l~~~T 225 (225)
|||||+.++...|+++|||+|+||||+||+.++||||+++|+|++|+|+||++||||||+||+||
T Consensus 161 ~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~S 225 (319)
T 1w9y_A 161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVIT 225 (319)
T ss_dssp ECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHT
T ss_pred ecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHh
Confidence 99999988778899999999999999996469999999999999999999999999999999998
|
| >3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} | Back alignment and structure |
|---|
| >1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* | Back alignment and structure |
|---|
| >1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... | Back alignment and structure |
|---|
| >1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* | Back alignment and structure |
|---|
| >3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} | Back alignment and structure |
|---|
| >3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} | Back alignment and structure |
|---|
| >2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A | Back alignment and structure |
|---|
| >3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 225 | ||||
| d1w9ya1 | 307 | b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla | 8e-64 | |
| d1gp6a_ | 349 | b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr | 2e-38 | |
| d1dcsa_ | 311 | b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S | 2e-34 | |
| d1odma_ | 329 | b.82.2.1 (A:) Isopenicillin N synthase {Emericella | 3e-23 |
| >d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: Penicillin synthase-like domain: 1-aminocyclopropane-1-carboxylate oxidase 1 species: Petunia hybrida [TaxId: 4102]
Score = 198 bits (504), Expect = 8e-64
Identities = 170/219 (77%), Positives = 201/219 (91%)
Query: 2 ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCM 61
ENFPII L K+NG ER+ATMEMI DACENWGFFELVNHGI E++DTV+++TK HY KCM
Sbjct: 1 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCM 60
Query: 62 DQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVEL 121
+QRFK++VASK LE VQ+EV D+DWESTFFL+HLP+SN++E+PDL+++YR+ M++FA L
Sbjct: 61 EQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRL 120
Query: 122 EKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAG 181
EK+AE+LL+LLCENLGLE+GYLK FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAG
Sbjct: 121 EKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAG 180
Query: 182 GIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQ 220
GIILLFQDD+VSGLQLLKD QW+DVPPM+HSIV+NLGDQ
Sbjct: 181 GIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQ 219
|
| >d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 | Back information, alignment and structure |
|---|
| >d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 | Back information, alignment and structure |
|---|
| >d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 225 | |||
| d1w9ya1 | 307 | 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun | 100.0 | |
| d1gp6a_ | 349 | Anthocyanidin synthase {Mouse-ear cress (Arabidops | 100.0 | |
| d1dcsa_ | 311 | Deacetoxycephalosporin C synthase {Streptomyces cl | 100.0 | |
| d1odma_ | 329 | Isopenicillin N synthase {Emericella nidulans [Tax | 100.0 |
| >d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: Penicillin synthase-like domain: 1-aminocyclopropane-1-carboxylate oxidase 1 species: Petunia hybrida [TaxId: 4102]
Probab=100.00 E-value=5.6e-63 Score=414.82 Aligned_cols=224 Identities=78% Similarity=1.345 Sum_probs=205.9
Q ss_pred CCCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcCCHHHHhHhhhcCCCcccccccc
Q 027317 2 ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEV 81 (225)
Q Consensus 2 ~~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~Gy~~~~~~~ 81 (225)
++||||||+.+.+.+|++++++|++||+++|||||+||||+.++++++++.+++||++|.|+|+++....++|.++..+.
T Consensus 1 ~~lPvIDl~~~~~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~~~~ 80 (307)
T d1w9ya1 1 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEV 80 (307)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred CCCCeEECcccCCcCHHHHHHHHHHHHHcCeEEEEEcCCCCHHHHHHHHHHHHHHHhCcHHHhhhhhcCCCCCcCccccc
Confidence 47999999999888899999999999999999999999999999999999999999999999998766555666666666
Q ss_pred cCCCCccceeccccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCceeeeeee
Q 027317 82 NDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSN 161 (225)
Q Consensus 82 ~~~d~~e~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~~ 161 (225)
...||+|.|++...+..+.+.||+.+++||+.+++|++.|.+|+.+|+++++++||+++++|.+.+....++.+.+|++|
T Consensus 81 ~~~d~~e~~~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr~~~ 160 (307)
T d1w9ya1 81 TDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSN 160 (307)
T ss_dssp GGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEE
T ss_pred cccChhhhcccccccccCcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHhhhhccccccccceecC
Confidence 77899999988776767778899999999999999999999999999999999999999999998866555678899999
Q ss_pred cCCCCCCCCCCCccccccCCceeEEEeCCCCCceeEeeCCceEecCCCCCcEEEEhhhHhhhcC
Q 027317 162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVIN 225 (225)
Q Consensus 162 Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~~~g~W~~v~p~~g~~vVnvGD~l~~~T 225 (225)
|||++.++...|+++|||+|+||||+|++.++||||.++|+|++|+|.||++|||+||+||+||
T Consensus 161 YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~~~g~Wi~v~p~~~~~vVnvGD~l~~~T 224 (307)
T d1w9ya1 161 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVIT 224 (307)
T ss_dssp CCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHT
T ss_pred CCCCcccccccccccccccceeEEeeccCCCCeEEEecCCcEEEeccCCCeEEEEcchhhHHhh
Confidence 9999988888899999999999999997678999999999999999999999999999999998
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| >d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} | Back information, alignment and structure |
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| >d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|