Citrus Sinensis ID: 027335
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 225 | ||||||
| 255537367 | 225 | Osmotin precursor, putative [Ricinus com | 1.0 | 1.0 | 0.742 | 6e-99 | |
| 224108780 | 225 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.755 | 3e-98 | |
| 224058573 | 225 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.751 | 4e-97 | |
| 225426801 | 225 | PREDICTED: thaumatin-like protein [Vitis | 1.0 | 1.0 | 0.746 | 1e-95 | |
| 225426807 | 225 | PREDICTED: thaumatin-like protein [Vitis | 1.0 | 1.0 | 0.742 | 7e-95 | |
| 329130216 | 223 | thaumatin-like protein [Litchi chinensis | 0.991 | 1.0 | 0.724 | 2e-94 | |
| 441482370 | 225 | thaumatin-like protein [Actinidia chinen | 1.0 | 1.0 | 0.733 | 9e-94 | |
| 147789487 | 225 | hypothetical protein VITISV_001194 [Viti | 1.0 | 1.0 | 0.728 | 1e-92 | |
| 225426805 | 225 | PREDICTED: thaumatin-like protein-like [ | 1.0 | 1.0 | 0.728 | 1e-92 | |
| 190358875 | 225 | RecName: Full=Thaumatin-like protein; Al | 1.0 | 1.0 | 0.724 | 5e-92 |
| >gi|255537367|ref|XP_002509750.1| Osmotin precursor, putative [Ricinus communis] gi|223549649|gb|EEF51137.1| Osmotin precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 365 bits (938), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/225 (74%), Positives = 189/225 (84%)
Query: 1 MNYFISLFNASFLFLTLYLTLVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVN 60
M + SL +FL TLY TL AATF I N CPYTVWAAA PGGGRRL+ G+ W ++ N
Sbjct: 1 MTFLKSLLIFTFLLATLYFTLAQAATFAITNKCPYTVWAAASPGGGRRLNTGETWTISAN 60
Query: 61 PGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFID 120
PGT ARIW RTNCQFD +GRG+C+TGDC GLL CQ YG+ PNTLAE+AL+QF++ DFID
Sbjct: 61 PGTTQARIWGRTNCQFDASGRGKCETGDCNGLLVCQGYGAAPNTLAEYALDQFEHQDFID 120
Query: 121 ISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNS 180
ISNIDGFN+PMEFSS SG C+RVI+CTADI+ QCPNEL+VPGGCNGPCPVFKTEEHCCNS
Sbjct: 121 ISNIDGFNIPMEFSSASGSCSRVIKCTADIIGQCPNELKVPGGCNGPCPVFKTEEHCCNS 180
Query: 181 GKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 225
G C PT FSR+FKERCPDAYSYPKDD TS+FTCP GTNYKV+FCP
Sbjct: 181 GNCSPTTFSRYFKERCPDAYSYPKDDPTSLFTCPTGTNYKVIFCP 225
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224108780|ref|XP_002333345.1| predicted protein [Populus trichocarpa] gi|222836270|gb|EEE74691.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224058573|ref|XP_002299549.1| predicted protein [Populus trichocarpa] gi|222846807|gb|EEE84354.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225426801|ref|XP_002283030.1| PREDICTED: thaumatin-like protein [Vitis vinifera] gi|147770982|emb|CAN60240.1| hypothetical protein VITISV_027469 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225426807|ref|XP_002283082.1| PREDICTED: thaumatin-like protein [Vitis vinifera] gi|147857465|emb|CAN82850.1| hypothetical protein VITISV_030860 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|329130216|gb|AEB77709.1| thaumatin-like protein [Litchi chinensis] | Back alignment and taxonomy information |
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| >gi|441482370|gb|AGC39176.1| thaumatin-like protein [Actinidia chinensis] | Back alignment and taxonomy information |
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| >gi|147789487|emb|CAN76134.1| hypothetical protein VITISV_001194 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225426805|ref|XP_002283064.1| PREDICTED: thaumatin-like protein-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|190358875|sp|P81370.2|TLP_ACTDE RecName: Full=Thaumatin-like protein; AltName: Allergen=Act d 2; Flags: Precursor gi|71057064|emb|CAI38795.2| thaumatin-like protein [Actinidia deliciosa] gi|441482368|gb|AGC39175.1| thaumatin-like protein [Actinidia deliciosa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 225 | ||||||
| TAIR|locus:2139777 | 244 | OSM34 "osmotin 34" [Arabidopsi | 0.968 | 0.893 | 0.654 | 2e-81 | |
| TAIR|locus:2037227 | 246 | AT1G75050 "AT1G75050" [Arabido | 0.973 | 0.890 | 0.426 | 1.5e-44 | |
| TAIR|locus:2037235 | 239 | PR5 "AT1G75040" [Arabidopsis t | 0.96 | 0.903 | 0.431 | 3.9e-44 | |
| TAIR|locus:2027161 | 246 | TLP-3 "AT1G75030" [Arabidopsis | 0.937 | 0.857 | 0.408 | 1.1e-41 | |
| TAIR|locus:2203236 | 356 | AT1G77700 "AT1G77700" [Arabido | 0.875 | 0.553 | 0.426 | 3.6e-41 | |
| TAIR|locus:2121189 | 345 | AT4G38660 "AT4G38660" [Arabido | 0.96 | 0.626 | 0.414 | 4.6e-41 | |
| TAIR|locus:2016442 | 247 | AT1G19320 "AT1G19320" [Arabido | 0.933 | 0.850 | 0.403 | 2.6e-40 | |
| TAIR|locus:2027864 | 264 | AT1G73620 [Arabidopsis thalian | 0.964 | 0.821 | 0.401 | 6.1e-39 | |
| TAIR|locus:2194344 | 244 | ATLP-1 [Arabidopsis thaliana ( | 0.955 | 0.881 | 0.386 | 1.9e-37 | |
| WB|WBGene00009213 | 233 | thn-1 [Caenorhabditis elegans | 0.906 | 0.875 | 0.383 | 1.9e-35 |
| TAIR|locus:2139777 OSM34 "osmotin 34" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 146/223 (65%), Positives = 172/223 (77%)
Query: 6 SLFNASFLFLTLYL-TLVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTK 64
+L ++F+F L L + AATF+I N C YTVWAAA PGGGRRLD GQ+W L+V GTK
Sbjct: 3 NLLVSTFIFSALLLISTATAATFEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTK 62
Query: 65 AARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNI 124
ARIW RTNC FD +GRGRCQTGDC G LQC +G PPNTLAE+ALNQF NLDF DIS +
Sbjct: 63 MARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLV 122
Query: 125 DGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGK-- 182
DGFN+PMEFS S C+R++ CTADI QCPN LR PGGCN PC VF+T ++CC +G+
Sbjct: 123 DGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGS 181
Query: 183 CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 225
C T++SRFFK+RCPDAYSYP+DD TS FTC TNY+VVFCP
Sbjct: 182 CSDTEYSRFFKQRCPDAYSYPQDDPTSTFTCTN-TNYRVVFCP 223
|
|
| TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2027864 AT1G73620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2194344 ATLP-1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| WB|WBGene00009213 thn-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 225 | |||
| smart00205 | 218 | smart00205, THN, Thaumatin family | 7e-99 | |
| pfam00314 | 212 | pfam00314, Thaumatin, Thaumatin family | 7e-95 | |
| cd09217 | 151 | cd09217, TLP-P, thaumatin and allergenic/antifunga | 9e-74 | |
| cd09218 | 219 | cd09218, TLP-PA, allergenic/antifungal thaumatin-l | 3e-72 | |
| cd09215 | 157 | cd09215, Thaumatin-like, the sweet-tasting protein | 2e-53 | |
| cd08961 | 153 | cd08961, GH64-TLP-SF, glycoside hydrolase family 6 | 6e-44 | |
| cd09219 | 229 | cd09219, TLP-F, thaumatin-like proteins: basidiomy | 2e-28 |
| >gnl|CDD|128501 smart00205, THN, Thaumatin family | Back alignment and domain information |
|---|
Score = 286 bits (733), Expect = 7e-99
Identities = 127/218 (58%), Positives = 146/218 (66%), Gaps = 19/218 (8%)
Query: 27 FDIRNNCPYTVWAAAVP-------GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGA 79
F+ NNCPYTVWAAA+P GGG L+ G +W L+ PGTK RIWART C FD +
Sbjct: 1 FEFVNNCPYTVWAAALPSGKPQLSGGGFELNSGASWQLDAPPGTKMGRIWARTGCNFDAS 60
Query: 80 GRGRCQTGDCGGLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG 138
GRGRC TGDCGG+LQC +G PP TLAEFALNQF LDF D+S +DGFN+PM F+ G
Sbjct: 61 GRGRCATGDCGGVLQCNGWGGRPPATLAEFALNQFGGLDFYDVSLVDGFNIPMSFTPTGG 120
Query: 139 -GCNRVIRCTADIVRQCPNELRVPGG-----CNGPCPVFKTEEHCC-----NSGKCGPTK 187
G + CTAD+ QCP EL+VPGG CN C VF T+++CC N C PT
Sbjct: 121 SGDCKGAGCTADLNAQCPAELQVPGGGSVVACNSACTVFGTDQYCCTGGQNNPETCPPTN 180
Query: 188 FSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 225
+SR FK CPDAYSY DD TS FTC GGTNYKV FCP
Sbjct: 181 YSRIFKNACPDAYSYAYDDPTSTFTCTGGTNYKVTFCP 218
|
The thaumatin family gathers proteins related to plant pathogenesis. The thaumatin family includes very basic members with extracellular and vacuolar localization. Thaumatin itsel is a potent sweet-tasting protein. Several members of this family display significant in vitro activity of inhibiting hyphal growth or spore germination of various fungi probably by a membrane permeabilizing mechanism. Length = 218 |
| >gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family | Back alignment and domain information |
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| >gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
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| >gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
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| >gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 225 | |||
| cd09218 | 219 | TLP-PA allergenic/antifungal thaumatin-like protei | 100.0 | |
| smart00205 | 218 | THN Thaumatin family. The thaumatin family gathers | 100.0 | |
| cd09219 | 229 | TLP-F thaumatin-like proteins: basidiomycete homol | 100.0 | |
| PF00314 | 213 | Thaumatin: Thaumatin family; InterPro: IPR001938 T | 100.0 | |
| cd09215 | 157 | Thaumatin-like the sweet-tasting protein, thaumati | 100.0 | |
| cd09217 | 151 | TLP-P thaumatin and allergenic/antifungal thaumati | 100.0 | |
| cd08961 | 153 | GH64-TLP-SF glycoside hydrolase family 64 (beta-1, | 100.0 | |
| PF04681 | 155 | Bys1: Blastomyces yeast-phase-specific protein; In | 98.56 | |
| cd09216 | 353 | GH64-LPHase-like glycoside hydrolase family 64: la | 90.61 | |
| cd09220 | 369 | GH64-GluB-like glycoside hydrolase family 64: beta | 90.29 |
| >cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-78 Score=524.78 Aligned_cols=197 Identities=48% Similarity=1.039 Sum_probs=186.3
Q ss_pred EEEEEcCCCCceeeeeeC--------CCceeecCCCceeEEeCCCCcceeeeeecccccCCCCccccccCCCCCceeccc
Q 027335 26 TFDIRNNCPYTVWAAAVP--------GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQA 97 (225)
Q Consensus 26 t~ti~N~C~~tVwp~~~p--------~~g~~L~~G~s~s~~~p~~w~sGriW~RtgC~~~~~g~~~C~TGdCgg~~~C~~ 97 (225)
+|||+|||+||||||+++ .+||+|+||++++|.+|++| +|||||||+|++|+.|+++|+||||+|+++|++
T Consensus 1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~W-sGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g 79 (219)
T cd09218 1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGW-SGRFWGRTGCSFDSSGKGSCATGDCGGGLECNG 79 (219)
T ss_pred CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCc-ceeeeeccCCCCCCCCccccccCCCCCeeecCC
Confidence 599999999999999975 37999999999999999999 799999999999999999999999999999997
Q ss_pred -CCCCCcceeeeeeccCCCcceeeecccCCCCCcceeeecCC--CCcCCcccccccccCCCCCCccC------CCccCCC
Q 027335 98 -YGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG--GCNRVIRCTADIVRQCPNELRVP------GGCNGPC 168 (225)
Q Consensus 98 -~g~ppaTlaEftl~~~~~~d~YDvSlVdG~NlP~~i~p~~g--~C~~~~~C~~dl~~~CP~~l~~~------~gC~s~C 168 (225)
.|.||+|||||||++.+++|||||||||||||||+|.|+++ .| +..+|.+|||+.||.||+++ .||+|+|
T Consensus 80 ~~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C-~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC 158 (219)
T cd09218 80 AGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGC-RTAGCVADLNAVCPAELQVKNSGGRVVACKSAC 158 (219)
T ss_pred CCCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCC-CCCcccCcccccCCHHHeeccCCCcEeeecCHH
Confidence 45899999999998877899999999999999999999763 69 99999999999999999985 2899999
Q ss_pred CcCCCCCcccCCC-----CCCCchhhHHHhhhCCCCCCCCCCCCCCceeeCCCCceEEEec
Q 027335 169 PVFKTEEHCCNSG-----KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFC 224 (225)
Q Consensus 169 ~~~~~~~~CC~g~-----~C~pt~ys~~fk~~CP~AYsya~Dd~ts~~tC~~~~~y~ItFC 224 (225)
++|++|||||+|+ +|+|+.|+++||++||+||+|+|||++++|+|+++++|+||||
T Consensus 159 ~~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC 219 (219)
T cd09218 159 LAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219 (219)
T ss_pred HhhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence 9999999999986 7999999999999999999999999999999998899999998
|
This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele |
| >smart00205 THN Thaumatin family | Back alignment and domain information |
|---|
| >cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
| >PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein | Back alignment and domain information |
|---|
| >cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
|---|
| >cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
| >PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C | Back alignment and domain information |
|---|
| >cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like | Back alignment and domain information |
|---|
| >cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 225 | ||||
| 1z3q_A | 200 | Resolution Of The Structure Of The Allergenic And A | 3e-85 | ||
| 4h8t_A | 198 | Structure Of Haze Forming Proteins In White Wines: | 9e-81 | ||
| 1pcv_A | 205 | Crystal Structure Of Osmotin, A Plant Antifungal Pr | 4e-77 | ||
| 2i0w_A | 207 | Crystal Structure Analysis Of Np24-I, A Thaumatin-L | 6e-76 | ||
| 1aun_A | 208 | Pathogenesis-Related Protein 5d From Nicotiana Taba | 2e-74 | ||
| 1du5_A | 206 | The Crystal Structure Of Zeamatin. Length = 206 | 4e-72 | ||
| 3aok_A | 207 | Crystal Structure Of Sweet-Tasting Protein Thaumati | 1e-69 | ||
| 1rqw_A | 207 | Thaumatin Structure At 1.05 A Resolution Length = 2 | 1e-68 | ||
| 1thv_A | 207 | The Structures Of Three Crystal Forms Of The Sweet | 7e-68 | ||
| 1kwn_A | 207 | 1.2 A Structure Of Thaumatin Crystallized In Gel Le | 1e-67 | ||
| 2blr_A | 206 | Thaumatin Before A High Dose X-Ray "burn" Length = | 1e-67 | ||
| 2d8o_A | 207 | Structure Of Vil-Thaumatin Length = 207 | 2e-66 | ||
| 2d8p_A | 207 | Structure Of Hyper-Vil-Thaumatin Length = 207 | 4e-65 | ||
| 2ahn_A | 222 | High Resolution Structure Of A Cherry Allergen Pru | 2e-31 | ||
| 3zs3_A | 222 | High Resolution Structure Of Mal D 2, The Thaumatin | 1e-29 | ||
| 3g7m_A | 151 | Structure Of The Thaumatin-Like Xylanase Inhibitor | 9e-18 |
| >pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 | Back alignment and structure |
|
| >pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 | Back alignment and structure |
| >pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 | Back alignment and structure |
| >pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 | Back alignment and structure |
| >pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 | Back alignment and structure |
| >pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 | Back alignment and structure |
| >pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 | Back alignment and structure |
| >pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 | Back alignment and structure |
| >pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 | Back alignment and structure |
| >pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 | Back alignment and structure |
| >pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 | Back alignment and structure |
| >pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 | Back alignment and structure |
| >pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 | Back alignment and structure |
| >pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 225 | |||
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 7e-72 | |
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 1e-68 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 2e-65 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 2e-65 | |
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 3e-56 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 2e-33 |
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 | Back alignment and structure |
|---|
Score = 217 bits (552), Expect = 7e-72
Identities = 132/206 (64%), Positives = 154/206 (74%), Gaps = 5/206 (2%)
Query: 25 ATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGR 83
A F + N CP+TVWAA+VP GGGR+L+RG++W + GT AARIWART C+FD +GRG
Sbjct: 1 AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGS 60
Query: 84 CQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNR 142
C+TGDCGG+LQC YG PNTLAE+AL QF NLDF DIS IDGFNVPM F G GC+R
Sbjct: 61 CRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSR 120
Query: 143 VIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCN---SGKCGPTKFSRFFKERCPDA 199
RC D+ +CP ELR G CN CPVFK +E+CC + C PT +SR+FK +CPDA
Sbjct: 121 GPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDA 180
Query: 200 YSYPKDDATSVFTCPGGTNYKVVFCP 225
YSYPKDDATS FTCP GTNYKVVFCP
Sbjct: 181 YSYPKDDATSTFTCPAGTNYKVVFCP 206
|
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 | Back alignment and structure |
|---|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 | Back alignment and structure |
|---|
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 225 | |||
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 100.0 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 100.0 | |
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 100.0 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 100.0 | |
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 100.0 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 100.0 | |
| 3gd0_A | 367 | Laminaripentaose-producing beta-1,3-guluase (lphas | 94.37 |
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-87 Score=570.69 Aligned_cols=200 Identities=74% Similarity=1.461 Sum_probs=195.2
Q ss_pred eEEEEEcCCCCceeeeeeCCCceeecCCCceeEEeCCCCcceeeeeecccccCCCCccccccCCCCCceecccCCCCCcc
Q 027335 25 ATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNT 104 (225)
Q Consensus 25 ~t~ti~N~C~~tVwp~~~p~~g~~L~~G~s~s~~~p~~w~sGriW~RtgC~~~~~g~~~C~TGdCgg~~~C~~~g~ppaT 104 (225)
++|||+|||+|||||+++|++|++|+|||++++.+|++|++|||||||+|+||++|+++|+||||||.++|++.|.||+|
T Consensus 1 ~t~ti~N~C~~tVWp~~~p~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pPaT 80 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCGGVLSCTAYGNPPNT 80 (200)
T ss_dssp CEEEEEECSSSCEEEEEETTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSSCC
T ss_pred CEEEEEeCCCCCeeceEeCCCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcCCeeecCCCCCCCcc
Confidence 48999999999999999999999999999999999999977999999999999999999999999999999998899999
Q ss_pred eeeeeeccCCCcceeeecccCCCCCcceeeecCCCCcCCcccccccccCCCCCCccCCCccCCCCcCCCCCcccCCCCCC
Q 027335 105 LAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCG 184 (225)
Q Consensus 105 laEftl~~~~~~d~YDvSlVdG~NlP~~i~p~~g~C~~~~~C~~dl~~~CP~~l~~~~gC~s~C~~~~~~~~CC~g~~C~ 184 (225)
||||+|++.+++|||||||||||||||+|+|+++.| +.++|.+|||+.||.|||+++||+|+|++|++|||||+|++|+
T Consensus 81 LaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g~C-~~~~C~~dln~~CP~~L~v~~gC~saC~af~~~~yCC~g~~C~ 159 (200)
T 1z3q_A 81 LAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGC-RGIRCAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNSGACS 159 (200)
T ss_dssp EEEEEEEETTTEEEEEEECTTCBSSCEEEEESSSSS-CCEEECSCHHHHCCTTTEETTEECCHHHHHCCHHHHCTTSCCC
T ss_pred eEEEEecCCCCCceeeeeeeccccCCeeeeeCCCCC-CccccccchhhhCCHHHcccCcccCcccccCCCcccCCCCCCC
Confidence 999999987789999999999999999999998889 9999999999999999999999999999999999999999999
Q ss_pred CchhhHHHhhhCCCCCCCCCCCCCCceeeCCCCceEEEecC
Q 027335 185 PTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 225 (225)
Q Consensus 185 pt~ys~~fk~~CP~AYsya~Dd~ts~~tC~~~~~y~ItFCP 225 (225)
|++||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 160 pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 160 PTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp CCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred chhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 99999999999999999999999999999988999999998
|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A | Back alignment and structure |
|---|
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... | Back alignment and structure |
|---|
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} | Back alignment and structure |
|---|
| >3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 225 | ||||
| d1auna_ | 208 | b.25.1.1 (A:) Pathogenesis-related protein 5d {Com | 8e-87 | |
| d1rqwa_ | 207 | b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d | 3e-83 | |
| d1du5a_ | 206 | b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 | 4e-83 |
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Pathogenesis-related protein 5d species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 253 bits (648), Expect = 8e-87
Identities = 133/206 (64%), Positives = 157/206 (76%), Gaps = 4/206 (1%)
Query: 24 AATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRG 82
+ F++ NNCPYTVWAAA P GGGRRL+RGQ+W PGTK ARIW RTNC FDGAGRG
Sbjct: 1 SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRG 60
Query: 83 RCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNR 142
CQTGDCGG+L+C+ +G PPNTLAE+ALNQF NLDF DIS IDGFN+PM F G +
Sbjct: 61 WCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGK 120
Query: 143 --VIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAY 200
I+CTA+I +CP LRVPGGCN PC F +++CC G CGPT+ SR+FK+RCPDAY
Sbjct: 121 CHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAY 180
Query: 201 SYPKDDATSVFTCPGG-TNYKVVFCP 225
SYP+DD TS FTC T+YKV+FCP
Sbjct: 181 SYPQDDPTSTFTCTSWTTDYKVMFCP 206
|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 | Back information, alignment and structure |
|---|
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 225 | |||
| d1auna_ | 208 | Pathogenesis-related protein 5d {Common tobacco (N | 100.0 | |
| d1rqwa_ | 207 | Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax | 100.0 | |
| d1du5a_ | 206 | Zeamatin {Maize (Zea mays) [TaxId: 4577]} | 100.0 |
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Pathogenesis-related protein 5d species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=8.4e-84 Score=551.03 Aligned_cols=201 Identities=66% Similarity=1.342 Sum_probs=193.7
Q ss_pred ceEEEEEcCCCCceeeeeeC-CCceeecCCCceeEEeCCCCcceeeeeecccccCCCCccccccCCCCCceecccCCCCC
Q 027335 24 AATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPP 102 (225)
Q Consensus 24 ~~t~ti~N~C~~tVwp~~~p-~~g~~L~~G~s~s~~~p~~w~sGriW~RtgC~~~~~g~~~C~TGdCgg~~~C~~~g~pp 102 (225)
+++|||+|||+|||||+++| ++|++|+||+++++.+|++|++|||||||||+||+.|+++|+||||||.++|++.|.||
T Consensus 1 ~~~fti~N~C~~TVWp~~~p~~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~~~G~pP 80 (208)
T d1auna_ 1 SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPP 80 (208)
T ss_dssp CCEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSS
T ss_pred CCEEEEEeCCCCCcccccccCCCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEecCCCCCCC
Confidence 46899999999999999998 67999999999999999999889999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCcceeeecccCCCCCcceeeecCC---CCcCCcccccccccCCCCCCccCCCccCCCCcCCCCCcccC
Q 027335 103 NTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG---GCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCN 179 (225)
Q Consensus 103 aTlaEftl~~~~~~d~YDvSlVdG~NlP~~i~p~~g---~C~~~~~C~~dl~~~CP~~l~~~~gC~s~C~~~~~~~~CC~ 179 (225)
+|||||||++.+++|||||||||||||||+|+|.++ .| +.++|.+|||..||.||++++||+|+|.+|++|||||+
T Consensus 81 ~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C-~~~~C~~dln~~CP~~L~v~~~C~saC~~~~~~~~CCt 159 (208)
T d1auna_ 81 NTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKC-HGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCT 159 (208)
T ss_dssp CCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTC-SCEEECSCHHHHCCTTTEETTEECCHHHHTCSHHHHCT
T ss_pred cceEEEEeccCCCcceeccccccccccceEEeccCCCCCCc-CcccccCCccccCCHhhccCCCCccceeecCCCccccC
Confidence 999999999877899999999999999999999863 69 99999999999999999999999999999999999999
Q ss_pred CCCCCCchhhHHHhhhCCCCCCCCCCCCCCceeeCCC-CceEEEecC
Q 027335 180 SGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 225 (225)
Q Consensus 180 g~~C~pt~ys~~fk~~CP~AYsya~Dd~ts~~tC~~~-~~y~ItFCP 225 (225)
+++|+|++|+++||++||+||+|||||++|||+|+++ ++|+|||||
T Consensus 160 ~~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP 206 (208)
T d1auna_ 160 QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 206 (208)
T ss_dssp TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEEST
T ss_pred CCcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCC
Confidence 9999999999999999999999999999999999875 799999999
|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} | Back information, alignment and structure |
|---|
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|