Citrus Sinensis ID: 027351


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220----
MVAEITSSSQYPYPIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSHGATSNDTEKLIEGFPQKTIFESLDESGLSFGIYYQYPPATLFYR
ccccccccccccccccEEEEEEEEcccHHHHHccccccccccccccccccccccccccccccEEcccccEEEcccccccccccccccccccccccccccccccccHHHHHccccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccccccccccccccccHHHHHHHccccEEEcccccccccccc
ccccccccccccccccEEEEEEEccccHHHHHccccccccccccccccccccccccccccccEEEccccccccccccccHHHHHHHHcccccccccccHHHccccccccccccccHccHHHHHHHccccccHHHHccccHcHcHHHHHHHHHHEEHHcHHccccccccccEEEEEEEccccccccccccHccccccccHHHHHHHccccEEEEEcccccEEEEc
mvaeitsssqypypiKTIVVLVQENRSFDHMIGWMKslnpeldgvtgsesnpistsdpnspliyfgdksvyvdpdpghsIQAIFEQVFGLTWAQYtslssssssnneelhvlrpnmqgfaQNAESTQKGMAASvmngfkpdmVPVYKELVAEFGvcdrwfasvpastqpnrlyvhsatshgatsndtekliegfpqktIFESLdesglsfgiyyqyppatlfyr
mvaeitsssqypypiKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATshgatsndteKLIEGFPQKTIFESLDESGLSFGIYYqyppatlfyr
MVAEITSSSQYPYPIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQYTslssssssnneelHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSHGATSNDTEKLIEGFPQKTIFESLDESGLSFGIYYQYPPATLFYR
**********YPYPIKTIVVLVQENRSFDHMIGWMKSL***********************LIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQYT**************************************MNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVH**************LIEGFPQKTIFESLDESGLSFGIYYQYPPATLFY*
*************PIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSHGATSNDTEKLIEGFPQKTIFESLDESGLSFGIYYQYPPATLFYR
********SQYPYPIKTIVVLVQENRSFDHMIGWMKSLNPELD************SDPNSPLIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQY************ELHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHS********NDTEKLIEGFPQKTIFESLDESGLSFGIYYQYPPATLFYR
***********PYPIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSHGATSNDTEKLIEGFPQKTIFESLDESGLSFGIYYQYPPATLFYR
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MVAEITSSSQYPYPIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSHGATSNDTEKLIEGFPQKTIFESLDESGLSFGIYYQYPPATLFYR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query224 2.2.26 [Sep-21-2011]
Q9RGS8 700 Non-hemolytic phospholipa no no 0.754 0.241 0.266 7e-08
P0A5R8 514 Phospholipase C 4 OS=Myco yes no 0.763 0.332 0.252 1e-06
P0A5R9 514 Phospholipase C 4 OS=Myco yes no 0.763 0.332 0.252 1e-06
Q04001 520 Phospholipase C 1 OS=Myco no no 0.781 0.336 0.252 6e-06
P95245 517 Phospholipase C 3 OS=Myco yes no 0.741 0.321 0.259 3e-05
P95246 521 Phospholipase C 2 OS=Myco no no 0.799 0.343 0.253 7e-05
P15713 692 Non-hemolytic phospholipa yes no 0.758 0.245 0.247 8e-05
P06200 730 Hemolytic phospholipase C no no 0.611 0.187 0.267 0.0001
>sp|Q9RGS8|PHLN_BURPS Non-hemolytic phospholipase C OS=Burkholderia pseudomallei (strain K96243) GN=plcN PE=1 SV=2 Back     alignment and function desciption
 Score = 57.4 bits (137), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 41/210 (19%)

Query: 15  IKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKSVYVDP 74
           ++ IV+L+QENRSFDH  G       +L GV G                 FGD      P
Sbjct: 47  VEHIVILMQENRSFDHYFG-------KLRGVRG-----------------FGDPR----P 78

Query: 75  DPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGM---- 130
               + +++F Q   L  A+       +S  N  +  L+    G+     +  KG     
Sbjct: 79  LALQNGKSVFHQPVLLGPAELLPFHPDAS--NLGMQFLQDLPHGWQDMHGAWNKGRYDRW 136

Query: 131 ----AASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSA--TSHGATS 184
                 + M   + D +P + +L   F +CD +  S+P+ST PNR Y+ +    + GA  
Sbjct: 137 IANKGTTTMAYLERDDIPFHYQLADAFTICDAYHCSIPSSTDPNRYYMWTGYVGNDGAGG 196

Query: 185 NDTEKLIE-GFPQKTIFESLDESGLSFGIY 213
                  E G+   T  E+L+++G+S+ IY
Sbjct: 197 GPVLGNEEAGYGWSTYPETLEQAGVSWKIY 226




Hydrolyzes phosphatidylserine as well as phosphatidylcholine.
Burkholderia pseudomallei (strain K96243) (taxid: 272560)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 3
>sp|P0A5R8|PHLD_MYCTU Phospholipase C 4 OS=Mycobacterium tuberculosis GN=plcD PE=3 SV=1 Back     alignment and function description
>sp|P0A5R9|PHLD_MYCBO Phospholipase C 4 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=plcD PE=3 SV=1 Back     alignment and function description
>sp|Q04001|PHLA_MYCTU Phospholipase C 1 OS=Mycobacterium tuberculosis GN=plcA PE=1 SV=3 Back     alignment and function description
>sp|P95245|PHLC_MYCTU Phospholipase C 3 OS=Mycobacterium tuberculosis GN=plcC PE=3 SV=2 Back     alignment and function description
>sp|P95246|PHLB_MYCTU Phospholipase C 2 OS=Mycobacterium tuberculosis GN=plcB PE=1 SV=2 Back     alignment and function description
>sp|P15713|PHLN_PSEAE Non-hemolytic phospholipase C OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=plcN PE=3 SV=2 Back     alignment and function description
>sp|P06200|PHLC_PSEAE Hemolytic phospholipase C OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=plcH PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query224
255566038 525 Phospholipase C 3 precursor, putative [R 0.955 0.407 0.691 3e-87
224124040 536 predicted protein [Populus trichocarpa] 0.897 0.375 0.728 4e-87
359489134 513 PREDICTED: phospholipase C 3-like isofor 0.910 0.397 0.704 3e-86
147775257203 hypothetical protein VITISV_025817 [Viti 0.892 0.985 0.713 8e-86
359489132 509 PREDICTED: phospholipase C 3-like isofor 0.892 0.392 0.713 1e-85
356504452 523 PREDICTED: non-hemolytic phospholipase C 0.946 0.405 0.668 2e-83
255637093 523 unknown [Glycine max] 0.946 0.405 0.663 9e-83
449532573220 PREDICTED: non-hemolytic phospholipase C 0.892 0.909 0.708 5e-82
449442455 529 PREDICTED: phospholipase C 3-like [Cucum 0.892 0.378 0.708 6e-82
356558928 517 PREDICTED: phospholipase C 3-like [Glyci 0.928 0.402 0.668 2e-81
>gi|255566038|ref|XP_002524007.1| Phospholipase C 3 precursor, putative [Ricinus communis] gi|223536734|gb|EEF38375.1| Phospholipase C 3 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/224 (69%), Positives = 183/224 (81%), Gaps = 10/224 (4%)

Query: 1   MVAEITSSSQYPYPIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNS 60
           M AE +S+S   YPIKT+VVLVQENRSFDHM+GW+K+LNPE+DGVTG ESNPISTSD NS
Sbjct: 1   MAAE-SSTSANEYPIKTVVVLVQENRSFDHMLGWLKTLNPEIDGVTGQESNPISTSDLNS 59

Query: 61  PLIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFA 120
            L++F D++ YVDPDPGHSIQAI+EQVFG+ W +  +LSS ++        + P M GFA
Sbjct: 60  SLVFFRDQAAYVDPDPGHSIQAIYEQVFGVEWTE-AALSSENA--------VSPKMNGFA 110

Query: 121 QNAESTQKGMAASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSH 180
           QNAE TQ+GMA +VMNGF+P+ VPVYKEL   F VCDRWFAS+P STQPNRLY+HSATSH
Sbjct: 111 QNAERTQQGMAETVMNGFRPEAVPVYKELAMNFAVCDRWFASIPTSTQPNRLYLHSATSH 170

Query: 181 GATSNDTEKLIEGFPQKTIFESLDESGLSFGIYYQYPPATLFYR 224
           GATSNDT+ L EGFPQKTIFES+ E+G SFGIY+Q  P TLFYR
Sbjct: 171 GATSNDTKMLAEGFPQKTIFESMHEAGFSFGIYFQQVPTTLFYR 214




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124040|ref|XP_002319230.1| predicted protein [Populus trichocarpa] gi|222857606|gb|EEE95153.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359489134|ref|XP_002265749.2| PREDICTED: phospholipase C 3-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147775257|emb|CAN65837.1| hypothetical protein VITISV_025817 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359489132|ref|XP_003633883.1| PREDICTED: phospholipase C 3-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356504452|ref|XP_003521010.1| PREDICTED: non-hemolytic phospholipase C-like [Glycine max] Back     alignment and taxonomy information
>gi|255637093|gb|ACU18878.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449532573|ref|XP_004173255.1| PREDICTED: non-hemolytic phospholipase C-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|449442455|ref|XP_004138997.1| PREDICTED: phospholipase C 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356558928|ref|XP_003547754.1| PREDICTED: phospholipase C 3-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query224
TAIR|locus:2099639 538 NPC4 "non-specific phospholipa 0.941 0.392 0.668 2.1e-75
TAIR|locus:2007357 533 NPC1 "non-specific phospholipa 0.495 0.208 0.693 3.7e-68
TAIR|locus:2096384 521 NPC5 "non-specific phospholipa 0.946 0.406 0.608 4e-67
TAIR|locus:2099654 523 NPC3 "non-specific phospholipa 0.941 0.403 0.605 5.1e-67
TAIR|locus:2039563 514 NPC2 "non-specific phospholipa 0.870 0.379 0.610 6.2e-62
TAIR|locus:2114470 520 NPC6 "non-specific phospholipa 0.495 0.213 0.567 2.6e-55
ASPGD|ASPL0000031238 508 AN8546 [Emericella nidulans (t 0.870 0.383 0.357 2.2e-23
ASPGD|ASPL0000065031 455 plcB [Emericella nidulans (tax 0.861 0.424 0.284 4.3e-15
ASPGD|ASPL0000049651 466 AN2336 [Emericella nidulans (t 0.875 0.420 0.296 3.2e-13
UNIPROTKB|P95245 517 plcC "Phospholipase C 3" [Myco 0.401 0.174 0.297 6e-06
TAIR|locus:2099639 NPC4 "non-specific phospholipase C4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
 Identities = 149/223 (66%), Positives = 170/223 (76%)

Query:     4 EITSSSQYPYPIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSE--SNPISTSDPNSP 61
             E T      YPIKTIVVLVQENRSFDH +GW K LN E+DGVT S+  SN +S+SD NS 
Sbjct:     3 ETTKGGSGSYPIKTIVVLVQENRSFDHTLGWFKELNREIDGVTKSDPKSNTVSSSDTNSL 62

Query:    62 LIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQYTXXXXXXXXXXXXXHVLRPNMQGFAQ 121
              + FGD+S YV+PDPGHSIQ I+EQVFG  W                 H   PNM GFAQ
Sbjct:    63 RVVFGDQSQYVNPDPGHSIQDIYEQVFGKPW-------DSGKPDPNPGH---PNMSGFAQ 112

Query:   122 NAESTQKGMAASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSHG 181
             NAE  +KGM+++VMNGFKP+ +PVYKELV  F +CDRWFASVPASTQPNRLYVHSATSHG
Sbjct:   113 NAERNKKGMSSAVMNGFKPNALPVYKELVQNFAICDRWFASVPASTQPNRLYVHSATSHG 172

Query:   182 ATSNDTEKLIEGFPQKTIFESLDESGLSFGIYYQYPPATLFYR 224
             ATSND + L+EGFPQKTIFESLDE+G SFGIYYQ+PP+TLFYR
Sbjct:   173 ATSNDKKLLLEGFPQKTIFESLDEAGFSFGIYYQFPPSTLFYR 215




GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA;ISS
GO:0004629 "phospholipase C activity" evidence=IDA
GO:0009395 "phospholipid catabolic process" evidence=IDA
TAIR|locus:2007357 NPC1 "non-specific phospholipase C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096384 NPC5 "non-specific phospholipase C5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099654 NPC3 "non-specific phospholipase C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039563 NPC2 "non-specific phospholipase C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2114470 NPC6 "non-specific phospholipase C6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000031238 AN8546 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000065031 plcB [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000049651 AN2336 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|P95245 plcC "Phospholipase C 3" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3LOW CONFIDENCE prediction!
3rd Layer3.1.4.3LOW CONFIDENCE prediction!
3rd Layer3.1.3.2LOW CONFIDENCE prediction!
3rd Layer3.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query224
pfam04185 357 pfam04185, Phosphoesterase, Phosphoesterase family 1e-50
COG3511 527 COG3511, PlcC, Phospholipase C [Cell envelope biog 1e-10
TIGR03396 689 TIGR03396, PC_PLC, phospholipase C, phosphocholine 2e-10
>gnl|CDD|217948 pfam04185, Phosphoesterase, Phosphoesterase family Back     alignment and domain information
 Score =  167 bits (425), Expect = 1e-50
 Identities = 66/211 (31%), Positives = 92/211 (43%), Gaps = 22/211 (10%)

Query: 15  IKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKSVYVDP 74
           IK +V+++QENRSFDH  G +  +   +                              DP
Sbjct: 1   IKHVVIIMQENRSFDHYFGTLPGVRGPIG-------------------FGKDVWYPNTDP 41

Query: 75  DPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGMAASV 134
           DPG S QA+  Q F  T  +        +  N   +       G   +  + +      V
Sbjct: 42  DPGASFQALENQPFDTTNGKPLDNGFCVNDLNHSWYQNHLAWNGGRNDKWTAKAMSGPQV 101

Query: 135 MNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSHGATSNDTEKLIE-- 192
           M  F    +P+Y  L  EF +CD +F SVP  TQPNRLY+ S TS G  +N    L +  
Sbjct: 102 MGYFDRSDIPIYWALADEFTLCDNYFCSVPGPTQPNRLYLLSGTSDGDGTNGGPVLADPK 161

Query: 193 -GFPQKTIFESLDESGLSFGIYYQYPPATLF 222
            GFP +TI + L + G+S+GIY    P TL 
Sbjct: 162 AGFPWRTIPDRLSQKGVSWGIYQGKFPGTLD 192


This family includes both bacterial phospholipase C enzymes EC:3.1.4.3, but also eukaryotic acid phosphatases EC:3.1.3.2. Length = 357

>gnl|CDD|226042 COG3511, PlcC, Phospholipase C [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|234195 TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 224
TIGR03396 690 PC_PLC phospholipase C, phosphocholine-specific, P 100.0
COG3511 527 PlcC Phospholipase C [Cell envelope biogenesis, ou 100.0
PF04185 376 Phosphoesterase: Phosphoesterase family; InterPro: 100.0
TIGR03397 483 acid_phos_Burk acid phosphatase, Burkholderia-type 100.0
TIGR03417 500 chol_sulfatase choline-sulfatase. 92.23
PRK13759 485 arylsulfatase; Provisional 85.73
TIGR02335 408 hydr_PhnA phosphonoacetate hydrolase. This family 82.96
>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type Back     alignment and domain information
Probab=100.00  E-value=7.4e-54  Score=417.86  Aligned_cols=168  Identities=26%  Similarity=0.423  Sum_probs=140.2

Q ss_pred             CCCCCCccEEEEEEEecccchhcccccccCCCCCCCCCCCCCCCCCCCCCCCCceeecCCC--ccc--------------
Q 027351            9 SQYPYPIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKS--VYV--------------   72 (224)
Q Consensus         9 ~~~~~~IkHVVVlm~ENRSFDhyfG~l~~~~~~~~Gl~g~~~nP~~~~~p~~~~v~~~~~~--~~~--------------   72 (224)
                      ...+++|||||||||||||||||||+|+       |+||+. ||..+..|+|.+|+.|+..  ..+              
T Consensus        38 tgt~~dv~HVVilmqENRSFDHyfGtl~-------GvrGf~-d~~~~~~~~g~~v~~q~~~~~~~~~Pf~ld~~~~~~~~  109 (690)
T TIGR03396        38 TGTIQDVEHVVILMQENRSFDHYFGTLR-------GVRGFG-DRRPIPLPDGKPVWYQPNAKGETVAPFHLDTSKTNAQR  109 (690)
T ss_pred             CCccccccEEEEEEeeccchhhhcccCc-------CccCCC-CCccccCCCCCCceecCCCCCceeCCcccCCcCcCccc
Confidence            3479999999999999999999999999       999998 8888888888888887542  111              


Q ss_pred             CCCCCCchHHHHHHhhCCCccccccccCCCCCCccccccCCCCCCchhHhhhhhcCCCcccccccccCCCchHHHHHHHH
Q 027351           73 DPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPVYKELVAE  152 (224)
Q Consensus        73 ~~Dp~h~~~~~~~qi~G~~~~~~~~~~~~~~~~~~~~~~~~g~mdgfv~~~~~~~~~~~~~vMgyy~~~~lp~~~~lA~~  152 (224)
                      ..|+.|+|.+.+.+                        +|+|+||+|+..       ++.++||||++++||++|+||++
T Consensus       110 ~~~~~H~w~~~~~a------------------------wn~G~~d~w~~~-------k~~~tMgYy~r~dlPf~~aLAda  158 (690)
T TIGR03396       110 VGGTPHSWSDAHAA------------------------WNNGRMDRWPAA-------KGPLTMGYYKREDIPFQYALADA  158 (690)
T ss_pred             CCCCCCCcHHHHHH------------------------HHCCCccccccc-------CCCceeeccCccccHHHHHHHHH
Confidence            12455666665555                        589999999974       46789999999999999999999


Q ss_pred             HhhcccccCCCCCCCchhhhhhhhccCCCCC-------CCCCCC-----cCCCCCCCCHHHHHHhCCCcEEEeec
Q 027351          153 FGVCDRWFASVPASTQPNRLYVHSATSHGAT-------SNDTEK-----LIEGFPQKTIFESLDESGLSFGIYYQ  215 (224)
Q Consensus       153 ftv~D~~f~s~~g~T~PNR~~l~sgts~G~~-------~n~~~~-----~~~~~~~~Ti~e~L~~~gisW~~Y~~  215 (224)
                      |||||+||||++|+|+|||+|+|||++++.+       .|+...     ....++|+||+|+|+++|||||+||+
T Consensus       159 FTvcD~yf~S~~g~T~PNR~~~~sGt~~~~~~~~~~~~~n~~~~~~~~~~~~~~~w~Ti~e~L~~aGVSWkvYq~  233 (690)
T TIGR03396       159 FTICDAYHCSVQGGTNPNRLYLWTGTNGPLGGAGGPAVTNDDDWPGIGPGEGGYTWTTYPERLEQAGVSWKVYQD  233 (690)
T ss_pred             hhhhhhhcccCCCCCCcCceeeEecccCCcccCCcceecCCccccccccccCCCCcCcHHHHHHhCCCcEEEEec
Confidence            9999999999999999999999999998753       222110     12468899999999999999999976



Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.

>COG3511 PlcC Phospholipase C [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF04185 Phosphoesterase: Phosphoesterase family; InterPro: IPR007312 This entry includes both bacterial phospholipase C enzymes (3 Back     alignment and domain information
>TIGR03397 acid_phos_Burk acid phosphatase, Burkholderia-type Back     alignment and domain information
>TIGR03417 chol_sulfatase choline-sulfatase Back     alignment and domain information
>PRK13759 arylsulfatase; Provisional Back     alignment and domain information
>TIGR02335 hydr_PhnA phosphonoacetate hydrolase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query224
2d1g_A 498 Acid phosphatase; ACPA, decavanadate vanadate, hyd 5e-20
>2d1g_A Acid phosphatase; ACPA, decavanadate vanadate, hydrolase; HET: DVT ETE PGE; 1.75A {Francisella tularensis subsp} Length = 498 Back     alignment and structure
 Score = 86.9 bits (214), Expect = 5e-20
 Identities = 36/257 (14%), Positives = 63/257 (24%), Gaps = 71/257 (27%)

Query: 14  PIKTIVVLVQENRSFDHMIGWMKSLNPELDG----------VTGSESNPISTSDPNSPLI 63
           PIK +V++ QEN SFD   G   +                      +  +  ++PN+   
Sbjct: 33  PIKHVVIIFQENNSFDRYFGMYPNAKNPEGEPKFVAKENTPNVNGLTKQLLENNPNTKNP 92

Query: 64  YFGDKSVYVDPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNA 123
           Y  D++        H          G                          M  F ++ 
Sbjct: 93  YRLDRNFQ-PCSQNHEYHQEISSFNG------------------------GLMNKFVEHG 127

Query: 124 ESTQKGMA----ASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATS 179
                         VM  +  + V         F + D  F +    + P  L + +  +
Sbjct: 128 GHDNDTYKQNCDGQVMGYYDGNTVTALWNYAQNFALNDNTFGTTFGPSTPGALNLVAGAN 187

Query: 180 H------GATSNDTEKLIEGFPQ--------------------------KTIFESLDESG 207
                  G   N     I   P                             I   L + G
Sbjct: 188 GPAMSPSGNLENIENNYIIDDPNPYYDDCSYGTSKSGDTNTAVAKITDGYNIGHYLTQKG 247

Query: 208 LSFGIYYQYPPATLFYR 224
           +++G +      T +  
Sbjct: 248 ITWGWFQGGFKPTSYSG 264


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query224
2d1g_A 498 Acid phosphatase; ACPA, decavanadate vanadate, hyd 100.0
3ed4_A 502 Arylsulfatase; structural genomics, PSI-2, protein 91.24
2qzu_A 491 Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfata 90.95
1auk_A 489 Arylsulfatase A; cerebroside-3-sulfate hydrolysis, 89.06
3b5q_A 482 Putative sulfatase YIDJ; NP_810509.1, structural g 88.86
3szy_A 427 Phosphonoacetate hydrolase; alkaline phosphatase s 88.05
4fdi_A 502 N-acetylgalactosamine-6-sulfatase; glycoprotein, e 87.15
3lxq_A 450 Uncharacterized protein VP1736; alkaline, phosphat 86.54
2vqr_A 543 Putative sulfatase; phosphonate monoester hydrolas 86.13
1fsu_A 492 N-acetylgalactosamine-4-sulfatase; glycosaminoglyc 85.16
2w8d_A 436 Processed glycerol phosphate lipoteichoic acid SY; 80.43
>2d1g_A Acid phosphatase; ACPA, decavanadate vanadate, hydrolase; HET: DVT ETE PGE; 1.75A {Francisella tularensis subsp} Back     alignment and structure
Probab=100.00  E-value=1.9e-50  Score=382.60  Aligned_cols=185  Identities=17%  Similarity=0.229  Sum_probs=136.5

Q ss_pred             CCCCCCccEEEEEEEecccchhcccccccCCCCCCCCCCCC---CCCCCCC--------CCCCCceeecCCCcccCCCCC
Q 027351            9 SQYPYPIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSE---SNPISTS--------DPNSPLIYFGDKSVYVDPDPG   77 (224)
Q Consensus         9 ~~~~~~IkHVVVlm~ENRSFDhyfG~l~~~~~~~~Gl~g~~---~nP~~~~--------~p~~~~v~~~~~~~~~~~Dp~   77 (224)
                      ...+++||||||||||||||||||||||++. ..+|+|++.   ..|...+        +|+. ..++.-+....+.|+.
T Consensus        28 ~~t~~~IkHVVVlmqENRSFDhyFGtl~~~~-~~~G~~~f~~~~~~p~~~gl~~~~~~~~~~~-~~Pf~l~~~~~~~d~~  105 (498)
T 2d1g_A           28 LKTTTPIKHVVIIFQENNSFDRYFGMYPNAK-NPEGEPKFVAKENTPNVNGLTKQLLENNPNT-KNPYRLDRNFQPCSQN  105 (498)
T ss_dssp             SCCSSSCCEEEEEEECSCCHHHHHTTTTCCC-CCTTSCCCCCCTTCCCCSCCCHHHHHSCSSS-SCCEECCTTSCCCCCC
T ss_pred             cccccCccEEEEEEEeccchhhhhccccccc-CCCCccccccCCCCCCCCCccccceecCCCc-cCCeecCcccCCCCCC
Confidence            4578999999999999999999999998653 245777774   1122111        1221 1233322222567999


Q ss_pred             CchHHHHHHhhCCCccccccccCCCCCCccccccCCCCCCchhHhhhhh-c---CCCcccccccccCCCchHHHHHHHHH
Q 027351           78 HSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAEST-Q---KGMAASVMNGFKPDMVPVYKELVAEF  153 (224)
Q Consensus        78 h~~~~~~~qi~G~~~~~~~~~~~~~~~~~~~~~~~~g~mdgfv~~~~~~-~---~~~~~~vMgyy~~~~lp~~~~lA~~f  153 (224)
                      |+|.+.+.|+                        ++|+||+|+...... .   ++.++++||||++++||++|+||++|
T Consensus       106 H~~~~~q~a~------------------------n~G~~d~w~~~~~~~~~~~~~~~~~~~Mgyy~~~diP~~~aLA~~f  161 (498)
T 2d1g_A          106 HEYHQEISSF------------------------NGGLMNKFVEHGGHDNDTYKQNCDGQVMGYYDGNTVTALWNYAQNF  161 (498)
T ss_dssp             CCHHHHHHHH------------------------GGGTCCCHHHHHSCCCHHHHHHHTTGGGEECCTTTSHHHHHHHHHS
T ss_pred             CCchHHHHHh------------------------hCCCccchhhccCccccccccCcccccceeeCCccChHHHHHHHhh
Confidence            9999988875                        689999999864320 0   12246899999999999999999999


Q ss_pred             hhcccccCCCCCCCchhhhhhhhccCCC--------------CCCCCCCC-c-----------------CCCCCCCCHHH
Q 027351          154 GVCDRWFASVPASTQPNRLYVHSATSHG--------------ATSNDTEK-L-----------------IEGFPQKTIFE  201 (224)
Q Consensus       154 tv~D~~f~s~~g~T~PNR~~l~sgts~G--------------~~~n~~~~-~-----------------~~~~~~~Ti~e  201 (224)
                      ||||+||||++|+|+|||+||+||++..              .+.++..+ .                 ...++|+||+|
T Consensus       162 tl~D~yf~sv~gpT~PNrl~l~sG~tG~~~~~~~~~~~d~~g~~~~d~~p~~~~~~~~~~~~~~~~~~~~~~~~~~Ti~d  241 (498)
T 2d1g_A          162 ALNDNTFGTTFGPSTPGALNLVAGANGPAMSPSGNLENIENNYIIDDPNPYYDDCSYGTSKSGDTNTAVAKITDGYNIGH  241 (498)
T ss_dssp             EEESSEECSSSSCHHHHHHHHHHSCCCSEECTTCCTTTEETTEECSCCEESSCGGGSTTSTTSCTTSCEEEECSCCCHHH
T ss_pred             hhhhhhhccCCCCCCCCeeEEEecCCCcccCcccccccCCCcccccCCCccccccccccccccccccccccCcCCCCHHH
Confidence            9999999999999999999999999831              11121100 0                 00368999999


Q ss_pred             HHHhCCCcEEEeecCCCC
Q 027351          202 SLDESGLSFGIYYQYPPA  219 (224)
Q Consensus       202 ~L~~~gisW~~Y~~~~p~  219 (224)
                      +|+++||||++|+++++.
T Consensus       242 ~L~~aGvSW~~Yq~~~~~  259 (498)
T 2d1g_A          242 YLTQKGITWGWFQGGFKP  259 (498)
T ss_dssp             HHHHHTCCEEEEETTCSC
T ss_pred             HHHHcCCceEEccCCCCc
Confidence            999999999999987763



>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli} Back     alignment and structure
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis} Back     alignment and structure
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens} SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P* 1e3c_P* 1e33_P* Back     alignment and structure
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3szy_A Phosphonoacetate hydrolase; alkaline phosphatase superfamily; 1.35A {Sinorhizobium meliloti} SCOP: c.76.1.0 PDB: 3szz_A 3t00_A 3t01_A 3t02_A Back     alignment and structure
>4fdi_A N-acetylgalactosamine-6-sulfatase; glycoprotein, enzyme replacement therapy, formylg N-linked glycosylation, lysosomal enzyme, hydrolase; HET: NAG CIT; 2.20A {Homo sapiens} PDB: 4fdj_A* Back     alignment and structure
>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB, sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio parahaemolyticus} Back     alignment and structure
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase, plasmid, formylglycine, phosphodiesterase; 1.42A {Rhizobium leguminosarum BV} PDB: 2w8s_A Back     alignment and structure
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation, hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2 Back     alignment and structure
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query224
d1fsua_ 492 Arylsulfatase B (4-sulfatase) {Human (Homo sapiens 93.48
d1auka_ 485 Arylsulfatase A {Human (Homo sapiens) [TaxId: 9606 92.49
d1p49a_ 553 Steryl-sulfatase {Human (Homo sapiens) [TaxId: 960 88.04
>d1fsua_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Alkaline phosphatase-like
superfamily: Alkaline phosphatase-like
family: Arylsulfatase
domain: Arylsulfatase B (4-sulfatase)
species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.48  E-value=0.086  Score=45.45  Aligned_cols=79  Identities=15%  Similarity=0.141  Sum_probs=54.1

Q ss_pred             cccccccCC-CchHHHHHHHHHhhcccccCCCCCCCchhhhhhhhccC---CCCCCCCCCC-cCCCC--CCCCHHHHHHh
Q 027351          133 SVMNGFKPD-MVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATS---HGATSNDTEK-LIEGF--PQKTIFESLDE  205 (224)
Q Consensus       133 ~vMgyy~~~-~lp~~~~lA~~ftv~D~~f~s~~g~T~PNR~~l~sgts---~G~~~n~~~~-~~~~~--~~~Ti~e~L~~  205 (224)
                      ..||+|... ..|.|.+||++=++++|+|++ + -+.|-|.-++||.-   .|...+.... ....+  ..+||+|.|.+
T Consensus        17 ~~lg~~g~~~~TPnld~La~~Gv~F~n~~~~-~-~c~PSRasllTG~y~~~~Gv~~~~~~~~~~~~l~~~~~tl~~~L~~   94 (492)
T d1fsua_          17 NDVGFHGSRIRTPHLDALAAGGVLLDNYYTQ-P-LATPSRSQLLTGRYQIRTGLQHQIIWPCQPSCVPLDEKLLPQLLKE   94 (492)
T ss_dssp             TSSGGGTCSSCCHHHHHHHHTSEEETTEECC-C-C-CHHHHHHHHCSCHHHHTCCSSCCCTTCCCCSCTTCCCHHHHHHH
T ss_pred             CccccCCCCCCCHHHHHHHHhCceecCcccC-c-ccHHHHHHHHHCcChhhhCCccCccCCCCCCcCCcccchHHHHHHH
Confidence            346776543 469999999999999999975 3 35599999999873   2332221110 11122  36899999999


Q ss_pred             CCCcEEEe
Q 027351          206 SGLSFGIY  213 (224)
Q Consensus       206 ~gisW~~Y  213 (224)
                      +|..-..+
T Consensus        95 ~GY~T~~~  102 (492)
T d1fsua_          95 AGYTTHMV  102 (492)
T ss_dssp             TTCEEEEE
T ss_pred             cCCCeeec
Confidence            99976654



>d1auka_ c.76.1.2 (A:) Arylsulfatase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure