Citrus Sinensis ID: 027383

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220----
Protein Sequence
MAEMEMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLLASSSASPSFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST
Secondary Structure (PSIPRED)
ccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccEEEEEEccccEEcccccccccHHHHHHHHHccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHcccEEEEcccccccHHHHHHcccccccEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccccccccEEEccccccccccEEEEcccccccccccccccccccccEEEEEEccccEEEccccccccHHHHHHHHHccccccEEEEEEEEccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcHcccEEEEEEccccccc
Coil and Loop (DISEMBL)
maememgqievceprsvqvWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLlasssaspsfkplpvvelplqesSAAAAAHvsfdgglsddcggggdgqeiEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECvssdkecdgkpkinyvtvferpGLHEFLKKLAEFADLVLFTAglegyarplvdkidrenlfslrlyrpstvst
Flexible Loop (DISEMBL)
maememgqievceprsvQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLLASSSASPSFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVssdkecdgkpkINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGyarplvdkidrenlfslrlyrpstvst
Low Complexity Region (SEG)
MAEMEMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPsffsylvglssssyssllasssaspsFKPLPVVELPLQESSAAAAAHVSFdgglsddcggggdgQEIEKltvvldldetlvCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST
Disordered region (IsUnstruct)
********IEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLS***************************************F***L**DCGGGGDGQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLY*******
Disordered Region (DISOPRED)
**********VCEPRSVQVWRGFVSWVGFIFQVFIQIL**************************************************************************TVVLDLDETLVCAYETSSL***IR**AAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVS*
Disordered Region (DISEMBL)
********IEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSS*************SFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST
Disordered Region (DISPRO)
*****MGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLLA**SASPSFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEMEMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLLASSSASPSFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	224	2.2.26 [Sep-21-2011]
Q9GZU7	261	Carboxy-terminal domain R	yes	no	0.437	0.375	0.358	2e-08
P58466	261	Carboxy-terminal domain R	yes	no	0.437	0.375	0.358	2e-08
Q9PTJ6	275	CTD small phosphatase-lik	no	no	0.415	0.338	0.392	3e-08
P58465	276	CTD small phosphatase-lik	no	no	0.415	0.336	0.383	9e-08
O15194	276	CTD small phosphatase-lik	no	no	0.415	0.336	0.383	9e-08
Q09695	325	Uncharacterized protein C	yes	no	0.397	0.273	0.333	1e-07
O14595	271	Carboxy-terminal domain R	no	no	0.415	0.343	0.357	2e-07
Q8BX07	270	Carboxy-terminal domain R	no	no	0.433	0.359	0.353	5e-07
Q07949	397	Probable phosphatase PSR2	yes	no	0.401	0.226	0.311	9e-07
Q54GB2	567	CTD small phosphatase-lik	no	no	0.410	0.162	0.327	6e-06

>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 19/117 (16%)

Query: 106 GQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKIN 165
            Q+ +K+ VV+DLDETLV    +S  P       A+  + +          E DG   ++
Sbjct: 85  AQDSDKICVVIDLDETLV---HSSFKP----VNNADFIIPV----------EIDGV--VH 125

Query: 166 YVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222
            V V +RP + EFL+++ E  + VLFTA L  YA P+ D +D+   F  RL+R S V
Sbjct: 126 QVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV 182

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6

>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 19/117 (16%)

Query: 106 GQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKIN 165
            Q+ +K+ VV+DLDETLV    +S  P       A+  + +          E DG   ++
Sbjct: 85  AQDSDKICVVIDLDETLV---HSSFKP----VNNADFIIPV----------EIDGV--VH 125

Query: 166 YVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222
            V V +RP + EFL+++ E  + VLFTA L  YA P+ D +D+   F  RL+R S V
Sbjct: 126 QVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV 182

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation (By similarity). Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2 SV=2

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
           K  VV+DLDETLV     SS   I     A+  + +          E DG   I+ V V 
Sbjct: 105 KKCVVIDLDETLV----HSSFKPI---SNADFIVPV----------EIDGT--IHQVYVL 145

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222
           +RP + EFL+++ E  + VLFTA L  YA P+ D +DR  +F  RL+R S V
Sbjct: 146 KRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV 197

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2 SV=3

 Score = 57.4 bits (137), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 19/112 (16%)

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
           K  VV+DLDETLV     SS   I     A+  + +          E DG   I+ V V 
Sbjct: 106 KKCVVIDLDETLV----HSSFKPI---SNADFIVPV----------EIDGT--IHQVYVL 146

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222
           +RP + EFL+++ +  + VLFTA L  YA P+ D +DR  +F  RL+R S V
Sbjct: 147 KRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV 198

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1 SV=2

 Score = 57.4 bits (137), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 19/112 (16%)

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
           K  VV+DLDETLV     SS   I     A+  + +          E DG   I+ V V 
Sbjct: 106 KKCVVIDLDETLV----HSSFKPI---SNADFIVPV----------EIDGT--IHQVYVL 146

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222
           +RP + EFL+++ +  + VLFTA L  YA P+ D +DR  +F  RL+R S V
Sbjct: 147 KRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV 198

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation (By similarity). Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 19/108 (17%)

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
           K  ++LDLDETLV +      PA         GL+                   + V V 
Sbjct: 157 KKCLILDLDETLVHSSFKYIEPADFVVSIEIDGLQ-------------------HDVRVV 197

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYR 218
           +RPG+ EFLKK+ +  ++V+FTA L  YA P++D +D  ++   RL+R
Sbjct: 198 KRPGVDEFLKKMGDMFEIVVFTASLAKYADPVLDMLDHSHVIRHRLFR 245

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 19/112 (16%)

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
           ++ VV+DLDETLV     SS   I         +   E+E  +           + V V 
Sbjct: 101 RICVVIDLDETLV----HSSFKPINNADF----IVPIEIEGTT-----------HQVYVL 141

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222
           +RP + EFL+++ E  + VLFTA L  YA P+ D +DR  +F  RL+R S V
Sbjct: 142 KRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESCV 193

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells. May contribute to the development of sarcomas.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1

 Score = 54.7 bits (130), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 19/116 (16%)

Query: 107 QEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINY 166
           Q+  ++ VV+DLDETLV     SS   I     A+  + + E+E  +           + 
Sbjct: 96  QDQGRICVVIDLDETLV----HSSFKPI---NNADFIVPV-EIEGTT-----------HQ 136

Query: 167 VTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222
           V V +RP + EFL+++ E  + VLFTA L  YA P+ D +DR  +F  RL+R + V
Sbjct: 137 VYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFREACV 192

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSR2 PE=1 SV=1

 Score = 53.9 bits (128), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 19/109 (17%)

Query: 110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTV 169
           +K  ++LDLDETLV +       +     +A+  L +          E D +  ++ V V
Sbjct: 226 QKKCLILDLDETLVHS-------SFKYMHSADFVLPV----------EIDDQ--VHNVYV 266

Query: 170 FERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYR 218
            +RPG+ EFL ++++  ++V+FTA +  YA PL+D +D       RL+R
Sbjct: 267 IKRPGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPNGTIHHRLFR 315

Probable phosphatase. Involved in the response to sodium and lithium ion stress (but not to potassium or sorbitol stress) by inducing transcription of the sodium pump ENA1/PMR2. Acts through a calcineurin-independent pathway and is functionally redundant with PSR1. Also involved in the general stress response; acts together with WHI2 to activate stress response element (STRE)-mediated gene expression, possibly through dephosphorylation of MSN2.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1

 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 21/113 (18%)

Query: 111 KLTVVLDLDETLV-CAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTV 169
           K+++VLDLDETLV C+ E    P +            F +   +++ +   K        
Sbjct: 390 KISLVLDLDETLVHCSTEPLEQPHLT-----------FPVFFNNTEYQVFAK-------- 430

Query: 170 FERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222
            +RP   EFL K+++  ++++FTA  E YA  L++ ID  N    RLYR S V
Sbjct: 431 -KRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKIKYRLYRDSCV 482

Probable phosphatase.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	224
225448441	318	PREDICTED: CTD small phosphatase-like pr	0.955	0.672	0.657	2e-73
449439892	301	PREDICTED: CTD small phosphatase-like pr	0.937	0.697	0.645	5e-71
307135932	301	hypothetical protein [Cucumis melo subsp	0.937	0.697	0.631	2e-69
225448443	298	PREDICTED: CTD small phosphatase-like pr	0.866	0.651	0.631	1e-68
224091008	324	predicted protein [Populus trichocarpa]	0.915	0.632	0.628	2e-68
225439430	322	PREDICTED: CTD small phosphatase-like pr	0.946	0.658	0.623	2e-64
224109316	261	predicted protein [Populus trichocarpa]	0.892	0.766	0.589	2e-63
297820342	304	NLI interacting factor family protein [A	0.919	0.677	0.585	3e-63
15228783	305	haloacid dehalogenase-like hydrolase dom	0.928	0.681	0.575	4e-63
224101149	307	predicted protein [Populus trichocarpa]	0.897	0.654	0.602	6e-63

>gi|225448441|ref|XP_002273682.1| PREDICTED: CTD small phosphatase-like protein 2 isoform 1 [Vitis vinifera] gi|297736603|emb|CBI25474.3| unnamed protein product [Vitis vinifera]

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 148/225 (65%), Positives = 170/225 (75%), Gaps = 11/225 (4%)

Query: 2   AEMEMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYL--VGLSSSSYSSL 59
           A+ E+ Q EV  PRS+Q+WR  ++W+ F FQ+F+QILRGTPS    L  VGL    + SL
Sbjct: 8   AKAELTQAEVYAPRSLQLWRTLLNWLAFFFQIFLQILRGTPSVTQVLSYVGLR---HHSL 64

Query: 60  LASSSASPSFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLD 119
           L SS   PSFKPLPVVELP  E    +    + DG    D       +  EK TVVLDLD
Sbjct: 65  LPSS---PSFKPLPVVELPELEPPPDSVQINATDGT---DSAAAAVDRPAEKFTVVLDLD 118

Query: 120 ETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFL 179
           ETLVCAYETSSLPA IR QA E+GLK FELECVSSDKEC+GKPK+NYVTVFERPGL EFL
Sbjct: 119 ETLVCAYETSSLPASIRNQAIESGLKWFELECVSSDKECEGKPKVNYVTVFERPGLREFL 178

Query: 180 KKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           K+L+EF++LVLFTAGLEGYARPLVD+ID ENLFSLRLYRPST+ST
Sbjct: 179 KQLSEFSELVLFTAGLEGYARPLVDRIDVENLFSLRLYRPSTIST 223

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439892|ref|XP_004137719.1| PREDICTED: CTD small phosphatase-like protein 2-like [Cucumis sativus] gi|449523123|ref|XP_004168574.1| PREDICTED: CTD small phosphatase-like protein 2-like [Cucumis sativus]

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 142/220 (64%), Positives = 163/220 (74%), Gaps = 10/220 (4%)

Query: 5   EMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLLASSS 64
           ++GQ EVC PRS+QVW+ F+ W+ F F V +QI+RG PS    L   S   +   L  SS
Sbjct: 3   QIGQTEVCAPRSLQVWQAFMDWLSFFFHVIVQIVRGAPSLPQIL---SYIGFRFPLLPSS 59

Query: 65  ASPSFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLDETLVC 124
           A PSFKPLP  ELPL + S    +       LSD   GGG  + +EK+TVVLDLDETLVC
Sbjct: 60  A-PSFKPLPAAELPLHQFSTKKIS------SLSDLDDGGGQDRPLEKVTVVLDLDETLVC 112

Query: 125 AYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE 184
           AYETSSLPA+ RTQA EAGL  FELECVSSDKE +GKPKI+YVTVFERPGLHEFL + AE
Sbjct: 113 AYETSSLPAVFRTQATEAGLNWFELECVSSDKEIEGKPKISYVTVFERPGLHEFLSQAAE 172

Query: 185 FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           FADL+LFTAGLEGYA+PLVD+ID E  FS RLYRPSTVST
Sbjct: 173 FADLILFTAGLEGYAKPLVDRIDTEGRFSHRLYRPSTVST 212

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307135932|gb|ADN33794.1| hypothetical protein [Cucumis melo subsp. melo]

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/220 (63%), Positives = 162/220 (73%), Gaps = 10/220 (4%)

Query: 5   EMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLLASSS 64
           ++GQ EVC PRS+QVW+  + W+ F F V +QI+RG PS    L   S   +   L  SS
Sbjct: 3   QIGQTEVCAPRSLQVWQALMDWLCFFFHVIVQIVRGAPSLPQIL---SYIGFRFPLLPSS 59

Query: 65  ASPSFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLDETLVC 124
           A PSFKPLP  ELPL + S    +       L+D   GGG  + +EK+TVVLDLDETLVC
Sbjct: 60  A-PSFKPLPAAELPLHQFSTKKIS------SLNDLDDGGGQDRPLEKITVVLDLDETLVC 112

Query: 125 AYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE 184
           AYETSSLPA+ RTQA EAGL  FELECVSSDKE +GKPKI+YVTVFERPGLHEFL + AE
Sbjct: 113 AYETSSLPAVFRTQATEAGLNWFELECVSSDKEVEGKPKISYVTVFERPGLHEFLSQAAE 172

Query: 185 FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           FA+L+LFTAGLEGYA+PLVD+ID E  FS RLYRPSTVST
Sbjct: 173 FAELILFTAGLEGYAKPLVDRIDTEGRFSHRLYRPSTVST 212

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448443|ref|XP_002274356.1| PREDICTED: CTD small phosphatase-like protein 2 isoform 2 [Vitis vinifera]

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/225 (63%), Positives = 164/225 (72%), Gaps = 31/225 (13%)

Query: 2   AEMEMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYL--VGLSSSSYSSL 59
           A+ E+ Q EV  PRS+Q+WR  ++W+ F FQ+F+QILRGTPS    L  VGL    + SL
Sbjct: 8   AKAELTQAEVYAPRSLQLWRTLLNWLAFFFQIFLQILRGTPSVTQVLSYVGLR---HHSL 64

Query: 60  LASSSASPSFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLD 119
           L SS   PSFKPLPVVELP  E    +                        ++ VVLDLD
Sbjct: 65  LPSS---PSFKPLPVVELPELEPPPDSV-----------------------QINVVLDLD 98

Query: 120 ETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFL 179
           ETLVCAYETSSLPA IR QA E+GLK FELECVSSDKEC+GKPK+NYVTVFERPGL EFL
Sbjct: 99  ETLVCAYETSSLPASIRNQAIESGLKWFELECVSSDKECEGKPKVNYVTVFERPGLREFL 158

Query: 180 KKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           K+L+EF++LVLFTAGLEGYARPLVD+ID ENLFSLRLYRPST+ST
Sbjct: 159 KQLSEFSELVLFTAGLEGYARPLVDRIDVENLFSLRLYRPSTIST 203

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091008|ref|XP_002309143.1| predicted protein [Populus trichocarpa] gi|222855119|gb|EEE92666.1| predicted protein [Populus trichocarpa]

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/226 (62%), Positives = 170/226 (75%), Gaps = 21/226 (9%)

Query: 10  EVCEPRSV-QVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLLASSSASPS 68
           EVC  RSV +VW+G ++ +GF+ ++F+QILRGTPS   +L+     ++  L   SS+ PS
Sbjct: 14  EVCVSRSVNEVWKGMMNGLGFVMKLFLQILRGTPSMAQFLLSYIGFTFPLL---SSSPPS 70

Query: 69  FKPLPVVELPLQESSAAA---AAHVS-------FDGGLSDDCGGGGDGQEIEKLTVVLDL 118
           FKPLPVVE+PLQE+++      AH S        D G SDDC        IEKLTVVLDL
Sbjct: 71  FKPLPVVEIPLQETTSNKITDKAHDSSCLPGYVCDFGASDDCL-------IEKLTVVLDL 123

Query: 119 DETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEF 178
           DETL+CAYE SSLPAIIRTQA EAG+K FELEC SS+K+ +GKP+INYVTVFERPGL EF
Sbjct: 124 DETLICAYEASSLPAIIRTQAVEAGVKCFELECFSSEKDVEGKPRINYVTVFERPGLKEF 183

Query: 179 LKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           LK++ EFADL+LFTAGLEGYARPL D+ID EN FS RLYRPSTVST
Sbjct: 184 LKQIGEFADLILFTAGLEGYARPLFDRIDVENQFSQRLYRPSTVST 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439430|ref|XP_002265560.1| PREDICTED: CTD small phosphatase-like protein 2 [Vitis vinifera] gi|296083159|emb|CBI22795.3| unnamed protein product [Vitis vinifera]

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/234 (62%), Positives = 167/234 (71%), Gaps = 22/234 (9%)

Query: 6   MGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYL--VGLSSSSYSSLLASS 63
           M   +V  PR +QVWR  V+W+GF  Q+F+QI RGTPS    L  +GL        L  S
Sbjct: 1   MAPTQVYVPRPLQVWRAVVNWLGFFLQIFLQIFRGTPSLPQLLSYIGLRHP-----LLPS 55

Query: 64  SASPSFKPLPVVELPLQESSAAAAA-------------HVSFDGGLSDDCGGGGDGQEIE 110
           SAS SF+PLPVVEL L +SS    +             H  F GG+  D   GGD + +E
Sbjct: 56  SAS-SFRPLPVVELSLHDSSPEPPSAPLSSPLPVRVVEHSPFGGGVGGD-DDGGDDRPLE 113

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
           KLTVVLDLDETLVCAYETSSLPA +RTQA EAGLK FELECVSSDKEC+GKP I+YVTVF
Sbjct: 114 KLTVVLDLDETLVCAYETSSLPAHLRTQAIEAGLKWFELECVSSDKECEGKPNISYVTVF 173

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           ERPGL EFL++++EFA+LVLFTA LEGYARPLVDKID  N FS RLYRPSTVST
Sbjct: 174 ERPGLQEFLEQISEFAELVLFTAALEGYARPLVDKIDAGNRFSKRLYRPSTVST 227

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109316|ref|XP_002315157.1| predicted protein [Populus trichocarpa] gi|222864197|gb|EEF01328.1| predicted protein [Populus trichocarpa]

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/224 (58%), Positives = 156/224 (69%), Gaps = 24/224 (10%)

Query: 1   MAEMEMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLL 60
           MAE+   ++ V  PRS+Q+WR    W+ F F +F+QILR         VG  + S     
Sbjct: 1   MAELTQPEV-VYSPRSIQLWRTLWDWLAFFFHIFLQILRA--------VGPQTLS----- 46

Query: 61  ASSSASPSFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLDE 120
               +S  FKPLP+VELP  +++    A V    G           + I+KL VVLDLDE
Sbjct: 47  ----SSHPFKPLPLVELP--DTTDPPPATVEISAG----TDAVSANEPIQKLKVVLDLDE 96

Query: 121 TLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLK 180
           TLVCAYETSSLPA +R QA EAGLK FEL+C+SSDKEC+GKPKINYVTVFERPGL EFLK
Sbjct: 97  TLVCAYETSSLPAALRNQATEAGLKWFELDCISSDKECEGKPKINYVTVFERPGLDEFLK 156

Query: 181 KLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           +L+EFA+LVLFTAGLEGYARPLVD+ID EN FSLRLYRPST ST
Sbjct: 157 QLSEFAELVLFTAGLEGYARPLVDRIDTENRFSLRLYRPSTSST 200

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820342|ref|XP_002878054.1| NLI interacting factor family protein [Arabidopsis lyrata subsp. lyrata] gi|297323892|gb|EFH54313.1| NLI interacting factor family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 133/227 (58%), Positives = 159/227 (70%), Gaps = 21/227 (9%)

Query: 1   MAEMEMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLL 60
           MAE+    + V  PRS QVW+  V+W+ F +Q+F+QILR         VG     Y  LL
Sbjct: 1   MAELTQADV-VYSPRSFQVWKTLVNWLAFFYQIFLQILRA--------VG-----YHPLL 46

Query: 61  ASSSASPS--FKPLPVVELPLQESSAAAAAHV-SFDGGLSDDCGGGGDGQEIEKLTVVLD 117
           +SS+ + +  FKPLP +EL  + S +     + S     S DC    +     +L VVLD
Sbjct: 47  SSSAKASADGFKPLPAIELLDRASESPTTVDIASTTTSDSSDC----ERSRFHRLKVVLD 102

Query: 118 LDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHE 177
           LDETLVCAYETSSLPA +R QA EAGLK FELEC+S+DKECDGKPKINYVTVFERPGLHE
Sbjct: 103 LDETLVCAYETSSLPAALRNQAIEAGLKWFELECLSTDKECDGKPKINYVTVFERPGLHE 162

Query: 178 FLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           FL++L+EFADLVLFTAGLEGYARPLVD+ID   + S RLYRPSTVST
Sbjct: 163 FLEQLSEFADLVLFTAGLEGYARPLVDRIDTRKVLSNRLYRPSTVST 209

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228783|ref|NP_191155.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|7573491|emb|CAB87850.1| putative protein [Arabidopsis thaliana] gi|20466680|gb|AAM20657.1| putative protein [Arabidopsis thaliana] gi|21537285|gb|AAM61626.1| unknown [Arabidopsis thaliana] gi|23198192|gb|AAN15623.1| putative protein [Arabidopsis thaliana] gi|332645940|gb|AEE79461.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 130/226 (57%), Positives = 160/226 (70%), Gaps = 18/226 (7%)

Query: 1   MAEMEMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLL 60
           MAE+    + V  PRS QVW+  V+W+ F +Q+F+QILR         VG     Y  LL
Sbjct: 1   MAELTQADV-VYSPRSFQVWKTLVNWLAFFYQIFLQILRA--------VG-----YHPLL 46

Query: 61  ASSSASPS--FKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDL 118
           +SS+ + +  FKPLP +EL  + S +     ++     SD C  G   +  ++L VVLDL
Sbjct: 47  SSSAKASADGFKPLPAIELLDRASESPTTVEIA-ATTTSDSCSDGARSR-FQRLKVVLDL 104

Query: 119 DETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEF 178
           DETLVCAYETSSLPA +R QA EAGLK FELEC+S+DKE DGKPKINYVTVFERPGLHEF
Sbjct: 105 DETLVCAYETSSLPAALRNQAIEAGLKWFELECLSTDKEYDGKPKINYVTVFERPGLHEF 164

Query: 179 LKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           L++L+EFADL+LFTAGLEGYARPLVD+ID   + + RLYRPSTVST
Sbjct: 165 LEQLSEFADLILFTAGLEGYARPLVDRIDTRKVLTNRLYRPSTVST 210

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101149|ref|XP_002312160.1| predicted protein [Populus trichocarpa] gi|222851980|gb|EEE89527.1| predicted protein [Populus trichocarpa]

 Score =  246 bits (627), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 135/224 (60%), Positives = 158/224 (70%), Gaps = 23/224 (10%)

Query: 1   MAEMEMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPSFFSYLVGLSSSSYSSLL 60
           MAE+   ++ V  PRS+Q+WR   +W+ F FQ+F+QILR         VG  S S     
Sbjct: 1   MAELTHPEV-VYSPRSIQLWRALWNWLAFFFQIFLQILRA--------VGPRSLS----- 46

Query: 61  ASSSASPSFKPLPVVELPLQESSAAAAAHVSFDGGLSDDCGGGGDGQEIEKLTVVLDLDE 120
              + S +FKPLP+ ELP  E++    A V    G           + I+KLTVVLDLDE
Sbjct: 47  ---TPSHTFKPLPLGELP--ETTDPPPATVEIPAGTD----AISANEPIQKLTVVLDLDE 97

Query: 121 TLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLK 180
           TLVCAYETSSLPA++  QA EAGLK FELECVSSDKEC+GK KINYVTVFERPGL EFLK
Sbjct: 98  TLVCAYETSSLPALLCNQAMEAGLKWFELECVSSDKECEGKLKINYVTVFERPGLDEFLK 157

Query: 181 KLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           +L+EFA+LVLFTAGLEGYARPLVD+ID EN FSLRLYRPST ST
Sbjct: 158 QLSEFAELVLFTAGLEGYARPLVDRIDTENRFSLRLYRPSTTST 201

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	224
TAIR|locus:2082048	305	AT3G55960 [Arabidopsis thalian	0.937	0.688	0.491	2.5e-49
TAIR|locus:2019352	221	AT1G29780 [Arabidopsis thalian	0.241	0.244	0.5	3.1e-09
FB|FBgn0036556	329	CG5830 [Drosophila melanogaste	0.285	0.194	0.454	9.6e-09
UNIPROTKB|H7C2S4	196	CTDSPL "CTD small phosphatase-	0.285	0.326	0.439	1.6e-08
UNIPROTKB|Q9PTJ6	275	NFI1 "CTD small phosphatase-li	0.285	0.232	0.454	2.2e-08
ZFIN|ZDB-GENE-060825-333	265	ctdspla "CTD (carboxy-terminal	0.285	0.241	0.439	3.3e-08
UNIPROTKB|F1PB80	250	ITGA9 "Uncharacterized protein	0.285	0.256	0.439	3.5e-08
RGD|1304841	250	Ctdspl "CTD (carboxy-terminal	0.285	0.256	0.439	3.5e-08
UNIPROTKB|I3L819	265	CTDSPL "Uncharacterized protei	0.285	0.241	0.439	4.3e-08
UNIPROTKB|O15194	276	CTDSPL "CTD small phosphatase-	0.285	0.231	0.439	4.8e-08

TAIR|locus:2082048 AT3G55960 [Arabidopsis thaliana (taxid:3702)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 110/224 (49%), Positives = 133/224 (59%)

Query:     1 MAEMEMGQIEVCEPRSVQVWRGFVSWVGFIFQVFIQILRGTPXXXXXXXXXXXXXXXXXX 60
             MAE+    + V  PRS QVW+  V+W+ F +Q+F+QILR                     
Sbjct:     1 MAELTQADV-VYSPRSFQVWKTLVNWLAFFYQIFLQILRAV-----------GYHPLLSS 48

Query:    61 XXXXXXXXFKPLPVVELPLQESSAAAAAHVSFXXXXXXXXXXXXXXQEIEKXXXXXXXXX 120
                     FKPLP +EL L  +S +    V                   ++         
Sbjct:    49 SAKASADGFKPLPAIEL-LDRASESPTT-VEIAATTTSDSCSDGARSRFQRLKVVLDLDE 106

Query:   121 XXXCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLK 180
                CAYETSSLPA +R QA EAGLK FELEC+S+DKE DGKPKINYVTVFERPGLHEFL+
Sbjct:   107 TLVCAYETSSLPAALRNQAIEAGLKWFELECLSTDKEYDGKPKINYVTVFERPGLHEFLE 166

Query:   181 KLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
             +L+EFADL+LFTAGLEGYARPLVD+ID   + + RLYRPSTVST
Sbjct:   167 QLSEFADLILFTAGLEGYARPLVDRIDTRKVLTNRLYRPSTVST 210

GO:0005634 "nucleus" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2019352 AT1G29780 [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query:   167 VTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220
             + V +RPG+ EFL++L E   +V+FTAGLE YA  ++DK+D+  + S RLYR S
Sbjct:    87 IFVVKRPGVTEFLERLGENYKVVVFTAGLEEYASQVLDKLDKNGVISQRLYRDS 140

GO:0005886 "plasma membrane" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

FB|FBgn0036556 CG5830 [Drosophila melanogaster (taxid:7227)]

 Score = 137 (53.3 bits), Expect = 9.6e-09, P = 9.6e-09
 Identities = 30/66 (45%), Positives = 42/66 (63%)

Query:   157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
             E DG   ++ V V +RP + EFL+K+ E  + VLFTA L  YA P+ D +D+ N+F  RL
Sbjct:   118 EIDGT--VHQVYVLKRPHVDEFLQKMGELYECVLFTASLAKYADPVADLLDKWNVFRARL 175

Query:   217 YRPSTV 222
             +R S V
Sbjct:   176 FRESCV 181

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|H7C2S4 CTDSPL "CTD small phosphatase-like protein" [Homo sapiens (taxid:9606)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query:   157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
             E DG   I+ V V +RP + EFL+++ +  + VLFTA L  YA P+ D +DR  +F  RL
Sbjct:    24 EIDGT--IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARL 81

Query:   217 YRPSTV 222
             +R S V
Sbjct:    82 FRESCV 87

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|Q9PTJ6 NFI1 "CTD small phosphatase-like protein" [Gallus gallus (taxid:9031)]

 Score = 132 (51.5 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 30/66 (45%), Positives = 41/66 (62%)

Query:   157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
             E DG   I+ V V +RP + EFL+++ E  + VLFTA L  YA P+ D +DR  +F  RL
Sbjct:   134 EIDGT--IHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDRWGVFRARL 191

Query:   217 YRPSTV 222
             +R S V
Sbjct:   192 FRESCV 197

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-060825-333 ctdspla "CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a" [Danio rerio (taxid:7955)]

 Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query:   157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
             E DG   ++ V V +RP + EFL+K+ E  + VLFTA L  YA P+ D +D+  +F  RL
Sbjct:   124 EIDGT--VHQVYVLKRPHVDEFLQKMGEMFECVLFTASLAKYADPVADLLDQWGVFRARL 181

Query:   217 YRPSTV 222
             +R S V
Sbjct:   182 FRESCV 187

GO:0016791 "phosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1PB80 ITGA9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 129 (50.5 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query:   157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
             E DG   I+ V V +RP + EFL+++ +  + VLFTA L  YA P+ D +DR  +F  RL
Sbjct:   109 EIDGT--IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARL 166

Query:   217 YRPSTV 222
             +R S V
Sbjct:   167 FRESCV 172

GO:0016791 "phosphatase activity" evidence=IEA

RGD|1304841 Ctdspl "CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like" [Rattus norvegicus (taxid:10116)]

 Score = 129 (50.5 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query:   157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
             E DG   I+ V V +RP + EFL+++ +  + VLFTA L  YA P+ D +DR  +F  RL
Sbjct:   109 EIDGT--IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARL 166

Query:   217 YRPSTV 222
             +R S V
Sbjct:   167 FRESCV 172

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|I3L819 CTDSPL "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 129 (50.5 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query:   157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
             E DG   I+ V V +RP + EFL+++ +  + VLFTA L  YA P+ D +DR  +F  RL
Sbjct:   124 EIDGT--IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARL 181

Query:   217 YRPSTV 222
             +R S V
Sbjct:   182 FRESCV 187

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|O15194 CTDSPL "CTD small phosphatase-like protein" [Homo sapiens (taxid:9606)]

 Score = 129 (50.5 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query:   157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
             E DG   I+ V V +RP + EFL+++ +  + VLFTA L  YA P+ D +DR  +F  RL
Sbjct:   135 EIDGT--IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARL 192

Query:   217 YRPSTV 222
             +R S V
Sbjct:   193 FRESCV 198

GO:0046872 "metal ion binding" evidence=IEA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	224
TIGR02251	162	TIGR02251, HIF-SF_euk, Dullard-like phosphatase do	2e-31
smart00577	148	smart00577, CPDc, catalytic domain of ctd-like pho	7e-29
pfam03031	153	pfam03031, NIF, NLI interacting factor-like phosph	2e-23
TIGR02250	156	TIGR02250, FCP1_euk, FCP1-like phosphatase, phosph	5e-08
COG5190	390	COG5190, FCP1, TFIIF-interacting CTD phosphatases,	6e-07

>gnl|CDD|233801 TIGR02251, HIF-SF_euk, Dullard-like phosphatase domain

 Score =  112 bits (281), Expect = 2e-31
 Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 19/115 (16%)

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
           K T+VLDLDETLV     S+          +A  K+  L             KI  V VF
Sbjct: 1   KKTLVLDLDETLVH----STFKMPKV----DADFKVPVLIDG----------KIIPVYVF 42

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDREN-LFSLRLYRPSTVST 224
           +RP + EFL++++++ +LV+FTA LE YA P++D +DR   + S RLYR S V T
Sbjct: 43  KRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT 97

This model represents the putative phosphatase domain of a family of eukaryotic proteins including "Dullard" , and the NLI interacting factor (NIF)-like phosphatases. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDNxPxxa) and aparrently lacking the last aspartate. This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the pfam03031. Length = 162

>gnl|CDD|214729 smart00577, CPDc, catalytic domain of ctd-like phosphatases

 Score =  105 bits (264), Expect = 7e-29
 Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 17/115 (14%)

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
           K T+VLDLDETLV +   S      R                            + V V 
Sbjct: 2   KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPV----------------LIDGHPHGVYVK 45

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLR-LYRPSTVST 224
           +RPG+ EFLK+ +E  +LV+FTAGL  YA P++D +D +  F  R L+R   V  
Sbjct: 46  KRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFV 100

Length = 148

>gnl|CDD|217328 pfam03031, NIF, NLI interacting factor-like phosphatase

 Score = 91.1 bits (227), Expect = 2e-23
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 25/112 (22%)

Query: 112 LTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFE 171
            T+VLDLDETLV +     LP                                + V V +
Sbjct: 1   KTLVLDLDETLVHSSFEPDLP------------------------FDFVLNFNHGVYVKK 36

Query: 172 RPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDREN-LFSLRLYRPSTV 222
           RPGL EFL++L+++ ++V+FTA  + YA P++DK+D +   F  RLYR S  
Sbjct: 37  RPGLDEFLQELSKYYEIVIFTASSKEYADPVLDKLDPKKKYFKHRLYRESCT 88

This family contains a number of NLI interacting factor isoforms and also an N-terminal regions of RNA polymerase II CTC phosphatase and FCP1 serine phosphatase. This region has been identified as the minimal phosphatase domain. Length = 153

>gnl|CDD|131304 TIGR02250, FCP1_euk, FCP1-like phosphatase, phosphatase domain

 Score = 50.4 bits (121), Expect = 5e-08
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 20/112 (17%)

Query: 111 KLTVVLDLDETLV-CAYETSSLPA---IIRTQAAEA--GLKLFELECVSSDKECDGKPKI 164
           KL +VLDLD+TL+    + +        I    +E    L+ F L              +
Sbjct: 6   KLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLG------------TM 53

Query: 165 NYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDREN-LFSLR 215
            Y+T   RP LHEFLK+ ++  ++ ++T G   YA+ +   ID +   F  R
Sbjct: 54  WYLTKL-RPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDR 104

This model represents the phosphatase domain of the humanRNA polymerase II subunit A C-terminal domain phosphatase (FCP1, ) and closely related phosphatases from eukaryotes including plants, fungi and slime mold. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDDppphW). This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3.This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the pfam03031. Length = 156

>gnl|CDD|227517 COG5190, FCP1, TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

 Score = 49.0 bits (117), Expect = 6e-07
 Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 25/121 (20%)

Query: 107 QEIEKLTVVLDLDETLV---CAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPK 163
               K T+VLDLDETLV     Y T                       V  +        
Sbjct: 208 STSPKKTLVLDLDETLVHSSFRYITLLDF------------------LVKVEI----SLL 245

Query: 164 INYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVS 223
            + V V +RP L  FL KL++  +LV FTA ++ YA P++D +D + +FS RL+R S VS
Sbjct: 246 QHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCVS 305

Query: 224 T 224
            
Sbjct: 306 Y 306

Length = 390

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	224
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	99.9
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	99.9
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	99.88
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	99.85
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	99.81
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.68
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	99.61
KOG2832	393	consensus TFIIF-interacting CTD phosphatase, inclu	99.53
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	99.51
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	98.2
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	97.92
PHA03398	303	viral phosphatase superfamily protein; Provisional	97.9
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	97.75
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.3
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	96.93
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	96.85
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	96.84
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	96.66
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	96.45
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	96.34
PRK08238	479	hypothetical protein; Validated	96.23
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	96.14
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	95.92
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	95.91
COG4996	164	Predicted phosphatase [General function prediction	95.66
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	95.62
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	95.52
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	95.51
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	95.32
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	95.18
PHA02530	300	pseT polynucleotide kinase; Provisional	94.62
PRK11133	322	serB phosphoserine phosphatase; Provisional	94.55
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	94.41
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	94.06
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	93.94
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	93.9
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	93.88
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	93.61
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	93.51
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	92.61
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	92.41
PRK13582	205	thrH phosphoserine phosphatase; Provisional	92.27
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	92.08
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	91.99
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	91.78
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	91.71
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	91.63
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	91.56
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	91.29
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	91.24
PRK13288	214	pyrophosphatase PpaX; Provisional	90.9
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	90.73
PRK09449	224	dUMP phosphatase; Provisional	90.65
PRK13222	226	phosphoglycolate phosphatase; Provisional	90.65
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	90.6
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	90.44
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	90.43
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	90.37
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	90.07
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	90.04
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	90.02
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	89.83
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	89.82
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	89.66
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	89.64
COG2503	274	Predicted secreted acid phosphatase [General funct	89.38
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	89.29
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	89.09
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	88.86
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	88.26
PRK10513	270	sugar phosphate phosphatase; Provisional	88.15
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	87.72
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	87.57
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	87.41
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	87.34
PRK10444	248	UMP phosphatase; Provisional	87.16
PLN02645	311	phosphoglycolate phosphatase	87.07
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	87.03
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	86.83
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	86.74
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	86.72
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	86.6
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	85.98
PRK06769	173	hypothetical protein; Validated	85.55
PRK01158	230	phosphoglycolate phosphatase; Provisional	85.43
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	85.12
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	84.98
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	84.92
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	84.85
PRK13226	229	phosphoglycolate phosphatase; Provisional	83.93
PLN02954	224	phosphoserine phosphatase	83.9
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	83.87
PHA02597	197	30.2 hypothetical protein; Provisional	83.66
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	83.57
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	83.49
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	83.43
PRK13223	272	phosphoglycolate phosphatase; Provisional	83.02
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	82.88
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	82.64
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	82.56
PLN02575	381	haloacid dehalogenase-like hydrolase	82.4
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	82.38
PRK11587	218	putative phosphatase; Provisional	82.34
PRK13288	214	pyrophosphatase PpaX; Provisional	81.12
PRK11590	211	hypothetical protein; Provisional	81.05
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	80.82
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	80.76
PRK13225	273	phosphoglycolate phosphatase; Provisional	80.74
PRK10976	266	putative hydrolase; Provisional	80.74
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	80.63
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	80.48
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	80.43

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=99.90  E-value=4.8e-25  Score=197.52  Aligned_cols=102  Identities=44%  Similarity=0.624  Sum_probs=84.0

Q ss_pred             CCCCCCCCeeEEEeCCCceeccccCCC-chHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHh
Q 027383          104 GDGQEIEKLTVVLDLDETLVCAYETSS-LPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKL  182 (224)
Q Consensus       104 ~~~~~~~KltLVLDLDETLVhs~e~Ss-~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~l  182 (224)
                      ++....+|++|||||||||||+.   . +++..     .+   .|     .++++++|.  ...+||.+|||++|||+.+
T Consensus        82 ~~~~~~~kk~lVLDLDeTLvHss---~~~~~~~-----~~---d~-----~~~v~~~~~--~~~~yV~kRP~vdeFL~~~  143 (262)
T KOG1605|consen   82 LRLATVGRKTLVLDLDETLVHSS---LNLKPIV-----NA---DF-----TVPVEIDGH--IHQVYVRKRPHVDEFLSRV  143 (262)
T ss_pred             cccccCCCceEEEeCCCcccccc---cccCCCC-----Cc---ce-----eeeeeeCCc--ceEEEEEcCCCHHHHHHHh
Confidence            44558899999999999999983   2 33211     11   13     335566664  5889999999999999999


Q ss_pred             hhCceEEEEcCCchhhHHHHHHhhCCC-CccceeeecCCcCC
Q 027383          183 AEFADLVLFTAGLEGYARPLVDKIDRE-NLFSLRLYRPSTVS  223 (224)
Q Consensus       183 se~fEIvIFTAg~k~YA~~Vld~IDP~-~~F~~RLyRdsC~~  223 (224)
                      +++||+++|||+.+.||++|+|.|||. ++|+||+||+||+.
T Consensus       144 s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~  185 (262)
T KOG1605|consen  144 SKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTL  185 (262)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEe
Confidence            999999999999999999999999995 69999999999974

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=99.90  E-value=5.7e-24  Score=176.17  Aligned_cols=95  Identities=47%  Similarity=0.655  Sum_probs=76.3

Q ss_pred             CeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCceEEE
Q 027383          111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVL  190 (224)
Q Consensus       111 KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~fEIvI  190 (224)
                      |+||||||||||||+....    ..+    ..   .|.+     +....|+  ...+||++|||++|||++++++||++|
T Consensus         1 k~~lvlDLDeTLi~~~~~~----~~~----~~---~~~~-----~~~~~~~--~~~~~v~~RPgl~eFL~~l~~~yei~I   62 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKM----PKV----DA---DFKV-----PVLIDGK--IIPVYVFKRPHVDEFLERVSKWYELVI   62 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCC----CCC----CC---ceEE-----EEEecCc--EEEEEEEECCCHHHHHHHHHhcCEEEE
Confidence            6899999999999985321    100    01   1222     1122332  568999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHhhCCCC-ccceeeecCCcCC
Q 027383          191 FTAGLEGYARPLVDKIDREN-LFSLRLYRPSTVS  223 (224)
Q Consensus       191 FTAg~k~YA~~Vld~IDP~~-~F~~RLyRdsC~~  223 (224)
                      ||++.+.||++|++.|||.+ +|++++||++|..
T Consensus        63 ~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~   96 (162)
T TIGR02251        63 FTASLEEYADPVLDILDRGGKVISRRLYRESCVF   96 (162)
T ss_pred             EcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE
Confidence            99999999999999999997 8999999999963

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=99.88  E-value=1.2e-22  Score=168.38  Aligned_cols=103  Identities=30%  Similarity=0.473  Sum_probs=78.2

Q ss_pred             CCCCeeEEEeCCCceeccccCCCchHHhh----hhHh--hhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHH
Q 027383          108 EIEKLTVVLDLDETLVCAYETSSLPAIIR----TQAA--EAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKK  181 (224)
Q Consensus       108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r----~q~~--eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~  181 (224)
                      .++|++||||||||||||...+.......    ++..  ..+...|.+         +    ....++++|||++|||++
T Consensus         3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~---------~----~~~~~v~~rPgv~efL~~   69 (156)
T TIGR02250         3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNL---------G----TMWYLTKLRPFLHEFLKE   69 (156)
T ss_pred             cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEc---------C----CeEEEEEECCCHHHHHHH
Confidence            46899999999999999986543332111    0000  011122222         1    256899999999999999


Q ss_pred             hhhCceEEEEcCCchhhHHHHHHhhCCCC-cccee-eecCCcCC
Q 027383          182 LAEFADLVLFTAGLEGYARPLVDKIDREN-LFSLR-LYRPSTVS  223 (224)
Q Consensus       182 lse~fEIvIFTAg~k~YA~~Vld~IDP~~-~F~~R-LyRdsC~~  223 (224)
                      +++.||++|||++.+.||++|++.|||.+ +|++| ++|++|..
T Consensus        70 l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~  113 (156)
T TIGR02250        70 ASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGS  113 (156)
T ss_pred             HHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCC
Confidence            99999999999999999999999999996 89777 67999963

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=99.85  E-value=1.2e-21  Score=158.66  Aligned_cols=88  Identities=42%  Similarity=0.623  Sum_probs=68.0

Q ss_pred             eeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCceEEEE
Q 027383          112 LTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLF  191 (224)
Q Consensus       112 ltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~fEIvIF  191 (224)
                      |+|||||||||||+...+..+         .   .+..     .    +  ....+++++|||+++||++++++||++||
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~---------~---~~~~-----~----~--~~~~~~v~~RP~l~~FL~~l~~~~ev~i~   57 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLP---------Y---DFKI-----I----D--QRGGYYVKLRPGLDEFLEELSKHYEVVIW   57 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-------------SEEE-----E----T--EEEEEEEEE-TTHHHHHHHHHHHCEEEEE
T ss_pred             CEEEEeCCCcEEEEeecCCCC---------c---ccce-----e----c--cccceeEeeCchHHHHHHHHHHhceEEEE
Confidence            689999999999986432111         0   0110     0    0  13578999999999999999999999999


Q ss_pred             cCCchhhHHHHHHhhCCCC-ccceeeecCCcC
Q 027383          192 TAGLEGYARPLVDKIDREN-LFSLRLYRPSTV  222 (224)
Q Consensus       192 TAg~k~YA~~Vld~IDP~~-~F~~RLyRdsC~  222 (224)
                      |++++.||++|++.|||++ .|++++||++|.
T Consensus        58 T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~   89 (159)
T PF03031_consen   58 TSASEEYAEPVLDALDPNGKLFSRRLYRDDCT   89 (159)
T ss_dssp             -SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSE
T ss_pred             EeehhhhhhHHHHhhhhhcccccccccccccc
Confidence            9999999999999999965 899999999995

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=99.81  E-value=7.1e-20  Score=157.86  Aligned_cols=82  Identities=24%  Similarity=0.238  Sum_probs=68.2

Q ss_pred             CCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhC
Q 027383          106 GQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEF  185 (224)
Q Consensus       106 ~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~  185 (224)
                      +...+|++|||||||||||+...                                   ....++.+||||+|||+.++++
T Consensus        16 ~~~~~kklLVLDLDeTLvh~~~~-----------------------------------~~~~~~~kRP~l~eFL~~~~~~   60 (195)
T TIGR02245        16 PPREGKKLLVLDIDYTLFDHRSP-----------------------------------AETGEELMRPYLHEFLTSAYED   60 (195)
T ss_pred             CCCCCCcEEEEeCCCceEccccc-----------------------------------CCCceEEeCCCHHHHHHHHHhC
Confidence            33568999999999999996310                                   0123588999999999999999


Q ss_pred             ceEEEEcCCchhhHHHHHHhhCCCC--ccceeeecCCcC
Q 027383          186 ADLVLFTAGLEGYARPLVDKIDREN--LFSLRLYRPSTV  222 (224)
Q Consensus       186 fEIvIFTAg~k~YA~~Vld~IDP~~--~F~~RLyRdsC~  222 (224)
                      |||+||||+++.||+++++.|++.+  .++.++++|+|.
T Consensus        61 feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~   99 (195)
T TIGR02245        61 YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTA   99 (195)
T ss_pred             CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEecccc
Confidence            9999999999999999999998753  477788889984

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.68  E-value=1.4e-16  Score=129.38  Aligned_cols=98  Identities=42%  Similarity=0.527  Sum_probs=75.9

Q ss_pred             CCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCceEE
Q 027383          110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLV  189 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~fEIv  189 (224)
                      +|++|||||||||||+...|..+ ..        -..+.     +.+.+.+.  ...++++.|||++|||+++.+.|+++
T Consensus         1 ~k~~lvldld~tl~~~~~~~~~~-~~--------~~~~~-----~~~~~~~~--~~~~~v~l~pG~~e~L~~L~~~~~l~   64 (148)
T smart00577        1 KKKTLVLDLDETLVHSTHRSFKE-WT--------NRDFI-----VPVLIDGH--PHGVYVKKRPGVDEFLKRASELFELV   64 (148)
T ss_pred             CCcEEEEeCCCCeECCCCCcCCC-CC--------ccceE-----EEEEeCCc--eEEEEEEECCCHHHHHHHHHhccEEE
Confidence            58999999999999986433221 10        00111     12222232  46789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHhhCCCC-ccceeeecCCcCC
Q 027383          190 LFTAGLEGYARPLVDKIDREN-LFSLRLYRPSTVS  223 (224)
Q Consensus       190 IFTAg~k~YA~~Vld~IDP~~-~F~~RLyRdsC~~  223 (224)
                      |||++.+.||+.+++.+++.+ +|+..+++++|..
T Consensus        65 I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~   99 (148)
T smart00577       65 VFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF   99 (148)
T ss_pred             EEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc
Confidence            999999999999999999976 6799999999964

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.61  E-value=5.2e-16  Score=153.00  Aligned_cols=107  Identities=30%  Similarity=0.337  Sum_probs=75.7

Q ss_pred             CCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCceEE
Q 027383          110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLV  189 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~fEIv  189 (224)
                      ++|.||+|||.||+|+...+.+..+......++    +..+....=..++...+...+||++|||+.|||+++++.||++
T Consensus       145 ~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~----~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemh  220 (635)
T KOG0323|consen  145 KKLHLVLDLDHTLLHTILKSDLSETEKYLKEEA----ESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMH  220 (635)
T ss_pred             hcceeehhhhhHHHHhhccchhhhhhhhccccc----ccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeE
Confidence            457999999999999987655543322110000    0000000000011001246799999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHhhCCCC-cccee-eecCC
Q 027383          190 LFTAGLEGYARPLVDKIDREN-LFSLR-LYRPS  220 (224)
Q Consensus       190 IFTAg~k~YA~~Vld~IDP~~-~F~~R-LyRds  220 (224)
                      |||+|.+.||..|+++|||++ +|++| +.||.
T Consensus       221 VyTmg~R~YA~~i~~liDP~~~lF~dRIisrde  253 (635)
T KOG0323|consen  221 VYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE  253 (635)
T ss_pred             EEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence            999999999999999999998 89998 66775

>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=99.53  E-value=1.4e-14  Score=135.13  Aligned_cols=85  Identities=27%  Similarity=0.401  Sum_probs=75.2

Q ss_pred             CCCCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhh
Q 027383          104 GDGQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLA  183 (224)
Q Consensus       104 ~~~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~ls  183 (224)
                      +.+..++++||||||.++|||..       |..    +                       ..|.+++|||++.||++++
T Consensus       182 ~pPy~Qp~yTLVleledvLVhpd-------ws~----~-----------------------tGwRf~kRPgvD~FL~~~a  227 (393)
T KOG2832|consen  182 PPPYEQPPYTLVLELEDVLVHPD-------WSY----K-----------------------TGWRFKKRPGVDYFLGHLA  227 (393)
T ss_pred             CCcccCCCceEEEEeeeeEeccc-------hhh----h-----------------------cCceeccCchHHHHHHhhc
Confidence            34667799999999999999962       321    1                       2356899999999999999


Q ss_pred             hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcC
Q 027383          184 EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV  222 (224)
Q Consensus       184 e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~  222 (224)
                      ++|||||||+....||.+|++.|||+|.++++|||++|.
T Consensus       228 ~~yEIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~  266 (393)
T KOG2832|consen  228 KYYEIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGATK  266 (393)
T ss_pred             ccceEEEEecCCccchhhhHhhcCCcceEEEEEecCccc
Confidence            999999999999999999999999999999999999996

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.51  E-value=1.2e-14  Score=136.71  Aligned_cols=99  Identities=42%  Similarity=0.536  Sum_probs=80.6

Q ss_pred             CCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhC
Q 027383          106 GQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEF  185 (224)
Q Consensus       106 ~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~  185 (224)
                      .....+++|++|||+||+|+....    +        ....|..     ..+..+.  ...++|.+||+|++|+..++++
T Consensus       207 ~~~~~~k~L~l~lde~l~~S~~~~----~--------~~~df~~-----~~e~~~~--~~~~~v~kRp~l~~fl~~ls~~  267 (390)
T COG5190         207 KSTSPKKTLVLDLDETLVHSSFRY----I--------TLLDFLV-----KVEISLL--QHLVYVSKRPELDYFLGKLSKI  267 (390)
T ss_pred             cCCCCccccccCCCccceeecccc----c--------cccchhh-----ccccccc--eeEEEEcCChHHHHHHhhhhhh
Confidence            667789999999999999985321    0        0011322     1222332  4789999999999999999999


Q ss_pred             ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcCC
Q 027383          186 ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVS  223 (224)
Q Consensus       186 fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~~  223 (224)
                      |++++||++.+.||++|+++||+.+.|++|+||.+|+.
T Consensus       268 ~~l~~ft~s~~~y~~~v~d~l~~~k~~~~~lfr~sc~~  305 (390)
T COG5190         268 HELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCVS  305 (390)
T ss_pred             EEEEEEecchhhhcchHHHhccccceeehhhhccccee
Confidence            99999999999999999999999999999999999975

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=98.20  E-value=6.3e-07  Score=85.00  Aligned_cols=103  Identities=29%  Similarity=0.396  Sum_probs=75.8

Q ss_pred             CCCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh
Q 027383          105 DGQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE  184 (224)
Q Consensus       105 ~~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse  184 (224)
                      .....+++.||.|+|.|.+|+....+.|.. .++..+..++.+.      +-...+  ....++++.||++..|+...++
T Consensus        20 ~l~q~~~~~l~~~~~~~~~h~~~~~~~p~~-~~~~~~~~~~~~~------~~~~~~--~~~~~~~k~~~~l~~~~~~i~~   90 (390)
T COG5190          20 ALRQDKKLILVVDLDQTIIHTTVDPNDPNN-VNQSLERTLKSVN------DRDPVQ--EKCAYYVKARPKLFPFLTKISP   90 (390)
T ss_pred             HhhcCcccccccccccceecccccCCCCCc-hhhhhhccccchh------cccccc--ccccceeeecccccchhhhhch
Confidence            456678999999999999999754333322 1233332222110      101111  2467899999999999999999


Q ss_pred             CceEEEEcCCchhhHHHHHHhhCCCC-ccceee
Q 027383          185 FADLVLFTAGLEGYARPLVDKIDREN-LFSLRL  216 (224)
Q Consensus       185 ~fEIvIFTAg~k~YA~~Vld~IDP~~-~F~~RL  216 (224)
                      .||+.+||+|++.||+.++.++||.| .|..|.
T Consensus        91 ~~e~~~~~~~~~~~~~~~~~i~d~~g~~~~d~~  123 (390)
T COG5190          91 LYELHIYTMGTRAYAERIAKIIDPTGKLFNDRI  123 (390)
T ss_pred             hcceeeEeeccccchhhhhhccccccccccccc
Confidence            99999999999999999999999997 787763

>TIGR01684 viral_ppase viral phosphatase

Probab=97.92  E-value=3.4e-05  Score=71.14  Aligned_cols=74  Identities=26%  Similarity=0.277  Sum_probs=60.6

Q ss_pred             CCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEec-cCHHHHHHHhhhC-
Q 027383          108 EIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFER-PGLHEFLKKLAEF-  185 (224)
Q Consensus       108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~R-PgL~EFL~~lse~-  185 (224)
                      -+.+..+|+||||||+-..+                                        -|..| |++.|.|+++.+. 
T Consensus       123 ~~~~kvIvFDLDgTLi~~~~----------------------------------------~v~irdPgV~EaL~~LkekG  162 (301)
T TIGR01684       123 FEPPHVVVFDLDSTLITDEE----------------------------------------PVRIRDPRIYDSLTELKKRG  162 (301)
T ss_pred             cccceEEEEecCCCCcCCCC----------------------------------------ccccCCHHHHHHHHHHHHCC
Confidence            34577999999999996310                                        14568 9999999999986 


Q ss_pred             ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          186 ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       186 fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +-++|+|++.+.+++.+++.++-.++|+..+.-++.
T Consensus       163 ikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv  198 (301)
T TIGR01684       163 CILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK  198 (301)
T ss_pred             CEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence            899999999999999999999888888776665544

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=97.90  E-value=3.6e-05  Score=71.04  Aligned_cols=75  Identities=25%  Similarity=0.242  Sum_probs=61.9

Q ss_pred             CCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEec-cCHHHHHHHhhhC-
Q 027383          108 EIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFER-PGLHEFLKKLAEF-  185 (224)
Q Consensus       108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~R-PgL~EFL~~lse~-  185 (224)
                      -+.++.+|+||||||+...+                                        -|..| |++.|.|+++.+. 
T Consensus       125 ~~~~~~i~~D~D~TL~~~~~----------------------------------------~v~irdp~V~EtL~eLkekG  164 (303)
T PHA03398        125 WEIPHVIVFDLDSTLITDEE----------------------------------------PVRIRDPFVYDSLDELKERG  164 (303)
T ss_pred             eeeccEEEEecCCCccCCCC----------------------------------------ccccCChhHHHHHHHHHHCC
Confidence            34678899999999996420                                        14568 9999999999975 


Q ss_pred             ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcC
Q 027383          186 ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV  222 (224)
Q Consensus       186 fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~  222 (224)
                      +-+.|+|+|.+.+++.+++.+.-.++|+..+..++..
T Consensus       165 ikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~  201 (303)
T PHA03398        165 CVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKA  201 (303)
T ss_pred             CEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcc
Confidence            8999999999999999999998888887777666543

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=97.75  E-value=7.2e-05  Score=55.63  Aligned_cols=48  Identities=25%  Similarity=0.303  Sum_probs=39.4

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRL  216 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL  216 (224)
                      ...+|++.++|+++.+. +.++|.|++...+++.+++.+.-...++..+
T Consensus        23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~   71 (139)
T cd01427          23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVI   71 (139)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhhee
Confidence            56799999999999986 9999999999999999999876433333333

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.30  E-value=0.00085  Score=61.82  Aligned_cols=49  Identities=22%  Similarity=0.354  Sum_probs=42.2

Q ss_pred             cCHHHHHHHhhhCc-eEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          173 PGLHEFLKKLAEFA-DLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       173 PgL~EFL~~lse~f-EIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      |.+.+-|.++.+.+ -+++|+.|.++||..-++.+.-.++|+..|.+.+-
T Consensus       145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~  194 (297)
T PF05152_consen  145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNK  194 (297)
T ss_pred             hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCcc
Confidence            56778899998765 89999999999999999999877899998887653

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=96.93  E-value=0.0039  Score=48.59  Aligned_cols=41  Identities=17%  Similarity=0.205  Sum_probs=34.2

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCc--------hhhHHHHHHhhCCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGL--------EGYARPLVDKIDRE  209 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~--------k~YA~~Vld~IDP~  209 (224)
                      ....|++.++|+++.+. +.++|-|++.        ..+++.+++.+.-.
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~   73 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP   73 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence            34679999999999754 9999999999        88888888887543

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=96.85  E-value=0.0034  Score=53.38  Aligned_cols=52  Identities=15%  Similarity=0.122  Sum_probs=43.8

Q ss_pred             EEEeccCHHHHHHHhh-hCceEEEEcCC-chhhHHHHHHhhCCC---------CccceeeecC
Q 027383          168 TVFERPGLHEFLKKLA-EFADLVLFTAG-LEGYARPLVDKIDRE---------NLFSLRLYRP  219 (224)
Q Consensus       168 ~V~~RPgL~EFL~~ls-e~fEIvIFTAg-~k~YA~~Vld~IDP~---------~~F~~RLyRd  219 (224)
                      .+..+||+.|+|+.+. +.+.+.|-|++ ...+++.+++.++-.         .+|+..+.-+
T Consensus        43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~  105 (174)
T TIGR01685        43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIY  105 (174)
T ss_pred             EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeecc
Confidence            4778999999999997 55999999988 999999999999866         6677766543

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=96.84  E-value=0.0014  Score=52.09  Aligned_cols=38  Identities=16%  Similarity=0.041  Sum_probs=34.0

Q ss_pred             EeccCHHHHHHHhhh-CceEEEEcCC-chhhHHHHHHhhC
Q 027383          170 FERPGLHEFLKKLAE-FADLVLFTAG-LEGYARPLVDKID  207 (224)
Q Consensus       170 ~~RPgL~EFL~~lse-~fEIvIFTAg-~k~YA~~Vld~ID  207 (224)
                      ...||+.++|+.+.+ .+.++|-|++ .+.|+..+++...
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~   68 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE   68 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence            467999999999974 6999999999 9999999998876

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=96.66  E-value=0.0078  Score=48.48  Aligned_cols=40  Identities=23%  Similarity=0.155  Sum_probs=31.1

Q ss_pred             EEeccCHHHHHHHhh-hCceEEEEcCCch---------------hhHHHHHHhhCC
Q 027383          169 VFERPGLHEFLKKLA-EFADLVLFTAGLE---------------GYARPLVDKIDR  208 (224)
Q Consensus       169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k---------------~YA~~Vld~IDP  208 (224)
                      +...||+.++|+++. +-|.++|-|++.+               .++..+++.++-
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l   81 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGV   81 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCC
Confidence            356899999999997 5599999999874               456666666543

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=96.45  E-value=0.0046  Score=54.97  Aligned_cols=48  Identities=4%  Similarity=0.070  Sum_probs=36.6

Q ss_pred             ccCHHHHHHHhhhC-ceEEEEcCC----chhhHHHHHHhhCCCCccceeeecC
Q 027383          172 RPGLHEFLKKLAEF-ADLVLFTAG----LEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       172 RPgL~EFL~~lse~-fEIvIFTAg----~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      .|+..|||+++.+. +.++|-|+.    .+.+++.+++.+.-.+.|...+..+
T Consensus       116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d  168 (237)
T TIGR01672       116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGD  168 (237)
T ss_pred             hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCC
Confidence            34499999999865 899999998    6679999998876655565444433

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=96.34  E-value=0.016  Score=52.45  Aligned_cols=52  Identities=12%  Similarity=0.091  Sum_probs=39.2

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCc----cceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENL----FSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~----F~~RLyRds  220 (224)
                      ...-||..+||+++.+. ..++|-|+..+.+.+...+.|...++    +++.+.|+.
T Consensus       117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~  173 (266)
T TIGR01533       117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD  173 (266)
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC
Confidence            34579999999999754 78999999998888877777655542    466777753

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PRK08238 hypothetical protein; Validated

Probab=96.23  E-value=0.0084  Score=58.33  Aligned_cols=47  Identities=19%  Similarity=0.147  Sum_probs=38.4

Q ss_pred             EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeec
Q 027383          169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYR  218 (224)
Q Consensus       169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyR  218 (224)
                      ...+|+..|+++++. +-+.++|-|++.+.+++++++.+.-   |++.+.-
T Consensus        71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigs  118 (479)
T PRK08238         71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFAS  118 (479)
T ss_pred             CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeC
Confidence            347899999999997 5589999999999999999998853   5544443

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=96.14  E-value=0.013  Score=47.65  Aligned_cols=48  Identities=10%  Similarity=0.016  Sum_probs=36.1

Q ss_pred             eccCHHHHHHHh-hhCceEEEEcCCchhhHH------------HHHHhhCCCCc-cceeeec
Q 027383          171 ERPGLHEFLKKL-AEFADLVLFTAGLEGYAR------------PLVDKIDRENL-FSLRLYR  218 (224)
Q Consensus       171 ~RPgL~EFL~~l-se~fEIvIFTAg~k~YA~------------~Vld~IDP~~~-F~~RLyR  218 (224)
                      ..+...+-|+++ .+-+++++.|+-.....+            .+.+.|+.+++ +++.+.|
T Consensus        25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~   86 (126)
T TIGR01689        25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVG   86 (126)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeC
Confidence            456677788887 467899999998888877            88889988773 5555443

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=95.92  E-value=0.069  Score=44.13  Aligned_cols=28  Identities=25%  Similarity=0.209  Sum_probs=24.2

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCch
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLE  196 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k  196 (224)
                      +..-||+.++|+++.+. |.++|.|++..
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~   53 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSG   53 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence            44569999999999865 99999999985

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=95.91  E-value=0.066  Score=44.25  Aligned_cols=28  Identities=21%  Similarity=0.184  Sum_probs=24.2

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCch
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLE  196 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k  196 (224)
                      +...||+.++|+++.+. +.+.|-|++..
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~   56 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQSG   56 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence            44679999999999975 99999999873

>COG4996 Predicted phosphatase [General function prediction only]

Probab=95.66  E-value=0.047  Score=45.98  Aligned_cols=88  Identities=28%  Similarity=0.199  Sum_probs=62.0

Q ss_pred             eEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccC-cccCCCcceeeEEEEeccCHHHHHHHhhhC-ceEEE
Q 027383          113 TVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSD-KECDGKPKINYVTVFERPGLHEFLKKLAEF-ADLVL  190 (224)
Q Consensus       113 tLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~-~~~~G~~~~~~v~V~~RPgL~EFL~~lse~-fEIvI  190 (224)
                      .+|+|+|+||......|++.+-            |..  ++.. .+-++     ..-|.+||++.+||+++.+- |=+-.
T Consensus         2 ~i~~d~d~t~wdhh~iSsl~pP------------f~r--Vs~n~i~Ds~-----G~ev~L~~~v~~~l~warnsG~i~~~   62 (164)
T COG4996           2 AIVFDADKTLWDHHNISSLEPP------------FRR--VSSNTIEDSK-----GREVHLFPDVKETLKWARNSGYILGL   62 (164)
T ss_pred             cEEEeCCCcccccccchhcCCc------------cee--cCccceecCC-----CeEEEEcHHHHHHHHHHHhCCcEEEE
Confidence            4799999999944444555321            211  1111 11122     23488999999999999854 77779


Q ss_pred             EcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          191 FTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       191 FTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      +|=..+.-|-+++..+|-..+|++..-.+
T Consensus        63 ~sWN~~~kA~~aLral~~~~yFhy~VieP   91 (164)
T COG4996          63 ASWNFEDKAIKALRALDLLQYFHYIVIEP   91 (164)
T ss_pred             eecCchHHHHHHHHHhchhhhEEEEEecC
Confidence            99999999999999999998888766544

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=95.62  E-value=0.032  Score=49.74  Aligned_cols=51  Identities=10%  Similarity=0.133  Sum_probs=36.5

Q ss_pred             EEeccCHHHHHHHhh-hCceEEEEcCC----chhhHHHHHHhhCC--CCccceeeecC
Q 027383          169 VFERPGLHEFLKKLA-EFADLVLFTAG----LEGYARPLVDKIDR--ENLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~ls-e~fEIvIFTAg----~k~YA~~Vld~IDP--~~~F~~RLyRd  219 (224)
                      ....||..|||+.+. +-++|++-|+.    .+.+++.+++.+.-  .+.|...+..+
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd  170 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGD  170 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCC
Confidence            445566999999994 66899999984    56688888886654  44565544433

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=95.52  E-value=0.086  Score=43.93  Aligned_cols=38  Identities=21%  Similarity=0.232  Sum_probs=29.5

Q ss_pred             eccCHHHHHHHhh-hCceEEEEcCCchh------------hHHHHHHhhCC
Q 027383          171 ERPGLHEFLKKLA-EFADLVLFTAGLEG------------YARPLVDKIDR  208 (224)
Q Consensus       171 ~RPgL~EFL~~ls-e~fEIvIFTAg~k~------------YA~~Vld~IDP  208 (224)
                      .-||+.+.|+++. +-+.+.|-|++...            +++.+++.++-
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl   93 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV   93 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence            3499999999996 57999999998763            46666666553

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01686 FkbH FkbH-like domain

Probab=95.51  E-value=0.023  Score=51.71  Aligned_cols=65  Identities=28%  Similarity=0.219  Sum_probs=47.7

Q ss_pred             CCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh-CceE
Q 027383          110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE-FADL  188 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse-~fEI  188 (224)
                      .+++||+|||+||.....-            +.|.              .|..     .....|+++++|+++.+ -+-+
T Consensus         2 ~~k~~v~DlDnTlw~gv~~------------e~g~--------------~~i~-----~~~~~~~~~e~L~~L~~~Gi~l   50 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVLG------------EDGI--------------DNLN-----LSPLHKTLQEKIKTLKKQGFLL   50 (320)
T ss_pred             CeEEEEEcCCCCCCCCEEc------------cCCc--------------cccc-----cCccHHHHHHHHHHHHhCCCEE
Confidence            4789999999999964210            1111              1110     11236899999999985 5899


Q ss_pred             EEEcCCchhhHHHHHHh
Q 027383          189 VLFTAGLEGYARPLVDK  205 (224)
Q Consensus       189 vIFTAg~k~YA~~Vld~  205 (224)
                      .|-|+..+..|..+++.
T Consensus        51 ai~S~n~~~~a~~~l~~   67 (320)
T TIGR01686        51 ALASKNDEDDAKKVFER   67 (320)
T ss_pred             EEEcCCCHHHHHHHHHh
Confidence            99999999999999987

The C-terminal portion of this domain is unique to this family (by BLAST).

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=95.32  E-value=0.084  Score=44.94  Aligned_cols=42  Identities=24%  Similarity=0.331  Sum_probs=30.2

Q ss_pred             EEEeccCHHHHHHHhhh-CceEEEEc-CCchhhHHHHHHhhCCC
Q 027383          168 TVFERPGLHEFLKKLAE-FADLVLFT-AGLEGYARPLVDKIDRE  209 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse-~fEIvIFT-Ag~k~YA~~Vld~IDP~  209 (224)
                      -+.+-|++.+.|+.+.+ -..|.+=| +..++.|+++++.++-.
T Consensus        43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~   86 (169)
T PF12689_consen   43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID   86 (169)
T ss_dssp             EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred             EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence            48889999999999995 68888888 56789999999999876

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=95.18  E-value=0.15  Score=42.45  Aligned_cols=47  Identities=17%  Similarity=0.048  Sum_probs=37.2

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCC---------------chhhHHHHHHhhCCCCccceeee
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAG---------------LEGYARPLVDKIDRENLFSLRLY  217 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg---------------~k~YA~~Vld~IDP~~~F~~RLy  217 (224)
                      +..-||+.+.|+++.+ -|.++|-|+.               ...|++.+++.++-.  |+..++
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~   90 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLI   90 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEE
Confidence            5678999999999986 5999999996               356788888777665  665554

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=94.62  E-value=0.069  Score=47.24  Aligned_cols=50  Identities=14%  Similarity=0.178  Sum_probs=43.0

Q ss_pred             EeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCC-ccceeeecC
Q 027383          170 FERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDREN-LFSLRLYRP  219 (224)
Q Consensus       170 ~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~-~F~~RLyRd  219 (224)
                      ...|+..++|+++.+. +.++|-|+..+..++.+++.|+..+ +|+.....+
T Consensus       187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~  238 (300)
T PHA02530        187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRP  238 (300)
T ss_pred             CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCc
Confidence            4589999999999865 8999999999999999999998887 676655554

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=94.55  E-value=0.032  Score=51.57  Aligned_cols=45  Identities=24%  Similarity=0.358  Sum_probs=38.2

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFS  213 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~  213 (224)
                      +..+||..++++.+.+. +.++|.|+|...+++.+.+.++-...+.
T Consensus       180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a  225 (322)
T PRK11133        180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA  225 (322)
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE
Confidence            56899999999999865 8999999999999999999876544333

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=94.41  E-value=0.21  Score=49.42  Aligned_cols=81  Identities=20%  Similarity=0.197  Sum_probs=52.3

Q ss_pred             CCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh-Cc
Q 027383          108 EIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE-FA  186 (224)
Q Consensus       108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse-~f  186 (224)
                      ...++.+.||+||||+.+.....++.                          +   ... +..+-|++.+.|+++.+ -|
T Consensus       165 ~~~~Kia~fD~DGTLi~t~sg~~~~~--------------------------~---~~d-~~~l~pgV~e~L~~L~~~Gy  214 (526)
T TIGR01663       165 KGQEKIAGFDLDGTIIKTKSGKVFPK--------------------------G---PDD-WQIIFPEIPEKLKELEADGF  214 (526)
T ss_pred             CccCcEEEEECCCCccccCCCccCCC--------------------------C---HHH-eeecccCHHHHHHHHHHCCC
Confidence            34678999999999997521000110                          0   001 12235999999999985 59


Q ss_pred             eEEEEcCCch------------hhHHHHHHhhCCCCccceeeecCC
Q 027383          187 DLVLFTAGLE------------GYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       187 EIvIFTAg~k------------~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      .|+|+|+...            .+++.+++.++-.  |+..+.-+.
T Consensus       215 ~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~  258 (526)
T TIGR01663       215 KICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGA  258 (526)
T ss_pred             EEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCC
Confidence            9999999777            4677788777543  554444333

Note that the EC number for the kinase function is: 2.7.1.78

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=94.06  E-value=0.22  Score=46.93  Aligned_cols=54  Identities=26%  Similarity=0.223  Sum_probs=39.4

Q ss_pred             CCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh-CceE
Q 027383          110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE-FADL  188 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse-~fEI  188 (224)
                      +|+.|+||=|+||+.....                 .|..              ...-.+...|++.++|+++.+ .+.+
T Consensus         1 ~~k~l~lDrDgtl~~~~~~-----------------~y~~--------------~~~~~~~l~pGV~e~L~~Lk~~G~kL   49 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPPT-----------------DFQV--------------DSLDKLAFEPGVIPALLKLQKAGYKL   49 (354)
T ss_pred             CCcEEEEeCCCCccCCCCc-----------------cccc--------------cCcccceECcCHHHHHHHHHhCCCeE
Confidence            4788999999999985310                 0100              011136789999999999986 5999


Q ss_pred             EEEcCC
Q 027383          189 VLFTAG  194 (224)
Q Consensus       189 vIFTAg  194 (224)
                      +|-|++
T Consensus        50 ~IvTNq   55 (354)
T PRK05446         50 VMVTNQ   55 (354)
T ss_pred             EEEECC
Confidence            999994

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=93.94  E-value=0.17  Score=43.80  Aligned_cols=15  Identities=20%  Similarity=0.129  Sum_probs=12.4

Q ss_pred             CeeEEEeCCCceecc
Q 027383          111 KLTVVLDLDETLVCA  125 (224)
Q Consensus       111 KltLVLDLDETLVhs  125 (224)
                      -..+++|+||||.+.
T Consensus         8 ~~~~~~D~dG~l~~~   22 (242)
T TIGR01459         8 YDVFLLDLWGVIIDG   22 (242)
T ss_pred             CCEEEEecccccccC
Confidence            447899999999874

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=93.90  E-value=0.12  Score=40.11  Aligned_cols=55  Identities=16%  Similarity=0.329  Sum_probs=48.1

Q ss_pred             EEEEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          167 VTVFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       167 v~V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ......|++.++|+.++ +.+.++|.|++...+++.+++.+.-..+|+..++.+++
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~  129 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDV  129 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGS
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchh
Confidence            35788999999999999 88999999999999999999999777778887776544

...

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=93.88  E-value=0.14  Score=42.40  Aligned_cols=37  Identities=16%  Similarity=0.356  Sum_probs=29.5

Q ss_pred             ccCHHHHHHHhhhC-ceEEEEcCCc-hhhHHHHHHhhCC
Q 027383          172 RPGLHEFLKKLAEF-ADLVLFTAGL-EGYARPLVDKIDR  208 (224)
Q Consensus       172 RPgL~EFL~~lse~-fEIvIFTAg~-k~YA~~Vld~IDP  208 (224)
                      -|++.++|+++.+. +.++|.|++. ...++.+++.++-
T Consensus        45 ~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl   83 (170)
T TIGR01668        45 YPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI   83 (170)
T ss_pred             ChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence            47888999999865 8999999998 6777777776653

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=93.61  E-value=0.14  Score=42.62  Aligned_cols=26  Identities=31%  Similarity=0.416  Sum_probs=20.5

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCC
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAG  194 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg  194 (224)
                      ..+-|++.+-|+++.+ -|.|+|+|+.
T Consensus        28 ~~~~~~v~~~L~~l~~~Gy~IvIvTNQ   54 (159)
T PF08645_consen   28 KFFPPGVPEALRELHKKGYKIVIVTNQ   54 (159)
T ss_dssp             EEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred             hhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence            4456789999999985 6999999986

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=93.51  E-value=0.12  Score=43.22  Aligned_cols=54  Identities=19%  Similarity=0.248  Sum_probs=46.5

Q ss_pred             EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ++...||+.++|+++.+. +.+.|.|++...++...++.++-.++|+..+..+..
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~  146 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE  146 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccC
Confidence            357899999999999876 999999999999999999998877788887766543

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=92.61  E-value=0.3  Score=37.53  Aligned_cols=30  Identities=40%  Similarity=0.533  Sum_probs=23.1

Q ss_pred             cCHHHHHHHhhhC-ceEEEEcCCc----hhhHHHH
Q 027383          173 PGLHEFLKKLAEF-ADLVLFTAGL----EGYARPL  202 (224)
Q Consensus       173 PgL~EFL~~lse~-fEIvIFTAg~----k~YA~~V  202 (224)
                      ||..||++++.+. ..+++.|+++    +.|++++
T Consensus        17 pga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L   51 (101)
T PF13344_consen   17 PGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL   51 (101)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred             cCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence            7888999999865 8999999998    4555555

...

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=92.41  E-value=0.31  Score=42.93  Aligned_cols=15  Identities=53%  Similarity=0.556  Sum_probs=13.1

Q ss_pred             CeeEEEeCCCceecc
Q 027383          111 KLTVVLDLDETLVCA  125 (224)
Q Consensus       111 KltLVLDLDETLVhs  125 (224)
                      .+.+++||||||+..
T Consensus         4 ~kli~~DlDGTLl~~   18 (273)
T PRK00192          4 KLLVFTDLDGTLLDH   18 (273)
T ss_pred             ceEEEEcCcccCcCC
Confidence            568999999999974

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=92.27  E-value=0.21  Score=41.33  Aligned_cols=47  Identities=28%  Similarity=0.422  Sum_probs=40.1

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCcccee
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLR  215 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~R  215 (224)
                      +..+||+.++|+.+.+.+.++|-|++...+++.+++.++-..+|.++
T Consensus        67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~  113 (205)
T PRK13582         67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHS  113 (205)
T ss_pred             CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcce
Confidence            45689999999999877999999999999999999998755555443

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=92.08  E-value=0.24  Score=42.56  Aligned_cols=48  Identities=21%  Similarity=0.361  Sum_probs=42.3

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL  216 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL  216 (224)
                      +..+||..+|++.+.+.+.++|-|++...+++++++.+.-+.+|.+++
T Consensus        67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l  114 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKL  114 (203)
T ss_pred             CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceee
Confidence            467999999999999888999999999999999999988766676553

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=91.99  E-value=0.58  Score=38.16  Aligned_cols=42  Identities=10%  Similarity=0.098  Sum_probs=31.8

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCcc
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLF  212 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F  212 (224)
                      +.++|+.  -++++.+ .+.+.|-|+..+..++.+++.+.-..+|
T Consensus        29 ~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~   71 (154)
T TIGR01670        29 FNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY   71 (154)
T ss_pred             EechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE
Confidence            3556665  6777775 5899999999999999999887654444

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=91.78  E-value=0.33  Score=38.89  Aligned_cols=48  Identities=31%  Similarity=0.574  Sum_probs=40.0

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRL  216 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL  216 (224)
                      +..+|+..++++++.+ -+.++|.|++.+.|++++++.+.-..+|+.++
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~  120 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRL  120 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeE
Confidence            5579999999999975 48999999999999999999886555555443

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=91.71  E-value=0.37  Score=39.86  Aligned_cols=53  Identities=26%  Similarity=0.245  Sum_probs=44.8

Q ss_pred             EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      .+..+||+.++|+.+.+. +.+.|.|++.+.+++.+++.++=.++|+..+..+.
T Consensus        83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~  136 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDS  136 (213)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCC
Confidence            367899999999999854 89999999999999999999877677777665543

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=91.63  E-value=0.47  Score=39.13  Aligned_cols=13  Identities=38%  Similarity=0.475  Sum_probs=11.3

Q ss_pred             EEEeCCCceeccc
Q 027383          114 VVLDLDETLVCAY  126 (224)
Q Consensus       114 LVLDLDETLVhs~  126 (224)
                      |++||||||++..
T Consensus         1 i~~DlDGTLl~~~   13 (254)
T PF08282_consen    1 IFSDLDGTLLNSD   13 (254)
T ss_dssp             EEEECCTTTCSTT
T ss_pred             cEEEECCceecCC
Confidence            6899999999854

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=91.56  E-value=0.41  Score=39.05  Aligned_cols=47  Identities=17%  Similarity=0.270  Sum_probs=40.4

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCcccee
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLR  215 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~R  215 (224)
                      +..+||+.++|+.+.+ -+.++|-|++...+++.+++.+.-..+|...
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~  126 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNE  126 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEE
Confidence            5679999999999975 5999999999999999999998765556544

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=91.29  E-value=0.36  Score=40.96  Aligned_cols=42  Identities=24%  Similarity=0.407  Sum_probs=37.7

Q ss_pred             EEEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCC
Q 027383          168 TVFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRE  209 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~  209 (224)
                      .+..|||..+||+.+.+ ...++|.|++.+.|++++++.+...
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~  110 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK  110 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc
Confidence            47899999999999987 4999999999999999999988543

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=91.24  E-value=0.42  Score=39.70  Aligned_cols=53  Identities=17%  Similarity=0.147  Sum_probs=46.4

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +..+||..++|+++.+.+.++|-|++.+.+++.+++.+.=.++|++.+..+.+
T Consensus        96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~  148 (224)
T TIGR02254        96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDA  148 (224)
T ss_pred             CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCcc
Confidence            67899999999999977999999999999999999988776778887776554

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=90.90  E-value=0.63  Score=38.99  Aligned_cols=54  Identities=17%  Similarity=0.100  Sum_probs=46.9

Q ss_pred             EEEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          168 TVFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      .+...||+.++|+.+.+ .+.+.|-|++.+.+++.+++.++=.++|+..+..+++
T Consensus        80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~  134 (214)
T PRK13288         80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDV  134 (214)
T ss_pred             hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcC
Confidence            35678999999999985 5899999999999999999999877788888776665

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=90.73  E-value=0.43  Score=39.40  Aligned_cols=52  Identities=19%  Similarity=0.257  Sum_probs=44.0

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      +...|++.++|+++.+. +.++|-|++...+++.+++.+.=.++|+..+..++
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~  143 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADA  143 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhh
Confidence            45679999999999986 99999999999999999998765557877766554

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK09449 dUMP phosphatase; Provisional

Probab=90.65  E-value=0.38  Score=40.41  Aligned_cols=53  Identities=17%  Similarity=0.275  Sum_probs=45.8

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...||+.++|+++.+.+-+.|-|++.+.+++.+++.+.-.++|+..+..+++
T Consensus        94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~  146 (224)
T PRK09449         94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQV  146 (224)
T ss_pred             CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECcc
Confidence            45789999999999988999999999999999999988777778877766554

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=90.65  E-value=0.65  Score=38.71  Aligned_cols=52  Identities=23%  Similarity=0.273  Sum_probs=43.7

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ...+||+.++|+.+.+ .+.++|.|++.+.+++.+++.++=.++|+..+..++
T Consensus        92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~  144 (226)
T PRK13222         92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDS  144 (226)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCC
Confidence            6689999999999985 589999999999999999999876667776555443

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=90.60  E-value=0.47  Score=43.36  Aligned_cols=15  Identities=20%  Similarity=0.330  Sum_probs=12.7

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++|+||||+++.
T Consensus         1 ~~~ifD~DGvL~~g~   15 (321)
T TIGR01456         1 FGFAFDIDGVLFRGK   15 (321)
T ss_pred             CEEEEeCcCceECCc
Confidence            468999999999863

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=90.44  E-value=0.72  Score=40.01  Aligned_cols=17  Identities=29%  Similarity=0.272  Sum_probs=14.3

Q ss_pred             CCeeEEEeCCCceeccc
Q 027383          110 EKLTVVLDLDETLVCAY  126 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~  126 (224)
                      ..+.+++||||||+...
T Consensus         2 ~~kli~~DlDGTLl~~~   18 (264)
T COG0561           2 MIKLLAFDLDGTLLDSN   18 (264)
T ss_pred             CeeEEEEcCCCCccCCC
Confidence            36789999999999864

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=90.43  E-value=0.5  Score=42.66  Aligned_cols=48  Identities=21%  Similarity=0.216  Sum_probs=41.2

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeee
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLY  217 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLy  217 (224)
                      ++-=|-|+++|-.+.+.+ .++||+|.+..|..++.+|--...|....|
T Consensus        99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieDcFegii~  146 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIEDCFEGIIC  146 (244)
T ss_pred             cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHHhccceeE
Confidence            677788999999999888 999999999999999999977766666544

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=90.37  E-value=0.53  Score=41.92  Aligned_cols=53  Identities=21%  Similarity=0.351  Sum_probs=46.4

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...||+.++|+++.+. +-++|-|++.+.+++.+++.++-.++|+..+..+.+
T Consensus       108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~  161 (260)
T PLN03243        108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDV  161 (260)
T ss_pred             cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccC
Confidence            55789999999999854 999999999999999999998766788888877665

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=90.07  E-value=0.67  Score=38.59  Aligned_cols=54  Identities=22%  Similarity=0.194  Sum_probs=46.2

Q ss_pred             EEEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          168 TVFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      .+...||..++|+++.+ .+.++|.|++...+++.+++.++-.++|+..+..+++
T Consensus        73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~  127 (205)
T TIGR01454        73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV  127 (205)
T ss_pred             ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC
Confidence            35678999999999975 5899999999999999999998887788877766554

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=90.04  E-value=0.63  Score=40.56  Aligned_cols=53  Identities=11%  Similarity=0.092  Sum_probs=46.8

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...||+.++|+++.+ -+.+.|-|++.+.+++.+++.++-.++|+..+..+++
T Consensus       107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~  160 (248)
T PLN02770        107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSEC  160 (248)
T ss_pred             CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcC
Confidence            5678999999999964 5999999999999999999999887889888877765

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=90.02  E-value=0.44  Score=40.52  Aligned_cols=38  Identities=24%  Similarity=0.478  Sum_probs=35.1

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhh
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKI  206 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~I  206 (224)
                      +..+||..|||+++.+ -+.++|-|++...|++++++.+
T Consensus        73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~  111 (219)
T PRK09552         73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL  111 (219)
T ss_pred             CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence            6789999999999985 4999999999999999999986

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=89.83  E-value=0.86  Score=38.38  Aligned_cols=14  Identities=36%  Similarity=0.432  Sum_probs=11.8

Q ss_pred             eeEEEeCCCceecc
Q 027383          112 LTVVLDLDETLVCA  125 (224)
Q Consensus       112 ltLVLDLDETLVhs  125 (224)
                      +.+++||||||+..
T Consensus         2 k~v~~DlDGTLl~~   15 (215)
T TIGR01487         2 KLVAIDIDGTLTEP   15 (215)
T ss_pred             cEEEEecCCCcCCC
Confidence            47899999999954

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=89.82  E-value=0.7  Score=38.66  Aligned_cols=47  Identities=23%  Similarity=0.366  Sum_probs=40.4

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCcccee
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLR  215 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~R  215 (224)
                      +..+||+.+||+.+.+ -+.++|-|+|...+++.+++.+.-..+|+..
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~  131 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANR  131 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeE
Confidence            4679999999999986 5999999999999999999998665566543

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=89.66  E-value=0.83  Score=38.45  Aligned_cols=13  Identities=46%  Similarity=0.462  Sum_probs=11.2

Q ss_pred             EEEeCCCceeccc
Q 027383          114 VVLDLDETLVCAY  126 (224)
Q Consensus       114 LVLDLDETLVhs~  126 (224)
                      +++||||||+...
T Consensus         2 i~~DlDGTLL~~~   14 (221)
T TIGR02463         2 VFSDLDGTLLDSH   14 (221)
T ss_pred             EEEeCCCCCcCCC
Confidence            7899999999753

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=89.64  E-value=0.78  Score=36.63  Aligned_cols=51  Identities=22%  Similarity=0.353  Sum_probs=41.0

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      +...||+.++|+++.+ -+.++|.|++...+ ..++..++-.++|+..++.+.
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~  135 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGD  135 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCC
Confidence            5678999999999986 58999999999999 776666666667877766443

HAD subfamilies caused by an overly broad single model.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=89.38  E-value=0.27  Score=44.94  Aligned_cols=38  Identities=13%  Similarity=0.272  Sum_probs=24.9

Q ss_pred             EeccCHHHHHHHhhhCceEEEEcCCc-hhh-HHHHHHhhC
Q 027383          170 FERPGLHEFLKKLAEFADLVLFTAGL-EGY-ARPLVDKID  207 (224)
Q Consensus       170 ~~RPgL~EFL~~lse~fEIvIFTAg~-k~Y-A~~Vld~ID  207 (224)
                      +.=||..|||+++.++--.|.|-+.. ++- .+.-++.|-
T Consensus       122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk  161 (274)
T COG2503         122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLK  161 (274)
T ss_pred             ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHH
Confidence            44599999999999887666665443 333 344455444

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=89.29  E-value=0.74  Score=39.96  Aligned_cols=12  Identities=42%  Similarity=0.556  Sum_probs=10.8

Q ss_pred             EEEeCCCceecc
Q 027383          114 VVLDLDETLVCA  125 (224)
Q Consensus       114 LVLDLDETLVhs  125 (224)
                      +++||||||++.
T Consensus         2 i~~DlDGTLl~~   13 (225)
T TIGR02461         2 IFTDLDGTLLPP   13 (225)
T ss_pred             EEEeCCCCCcCC
Confidence            689999999984

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=89.09  E-value=0.89  Score=39.97  Aligned_cols=18  Identities=33%  Similarity=0.397  Sum_probs=15.2

Q ss_pred             CCCeeEEEeCCCceeccc
Q 027383          109 IEKLTVVLDLDETLVCAY  126 (224)
Q Consensus       109 ~~KltLVLDLDETLVhs~  126 (224)
                      +.++.+++||||||++..
T Consensus         5 ~~~~lI~~DlDGTLL~~~   22 (271)
T PRK03669          5 QDPLLIFTDLDGTLLDSH   22 (271)
T ss_pred             CCCeEEEEeCccCCcCCC
Confidence            457889999999999863

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=88.86  E-value=0.66  Score=42.52  Aligned_cols=49  Identities=18%  Similarity=0.386  Sum_probs=40.5

Q ss_pred             EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhC---CC-Cccceee
Q 027383          168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKID---RE-NLFSLRL  216 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~ID---P~-~~F~~RL  216 (224)
                      -+..|||+.+|++.+.+. ..++|+|+|...+++.+++.+.   +. .++++++
T Consensus       119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L  172 (277)
T TIGR01544       119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFM  172 (277)
T ss_pred             CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeE
Confidence            478899999999999755 8999999999999999999743   33 3566664

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=88.26  E-value=1  Score=37.30  Aligned_cols=12  Identities=42%  Similarity=0.609  Sum_probs=10.7

Q ss_pred             EEEeCCCceecc
Q 027383          114 VVLDLDETLVCA  125 (224)
Q Consensus       114 LVLDLDETLVhs  125 (224)
                      +++|+||||+..
T Consensus         2 i~~D~DgTL~~~   13 (204)
T TIGR01484         2 LFFDLDGTLLDP   13 (204)
T ss_pred             EEEeCcCCCcCC
Confidence            789999999964

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=88.15  E-value=1.8  Score=37.54  Aligned_cols=16  Identities=25%  Similarity=0.339  Sum_probs=13.4

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||++..
T Consensus         3 ~kli~~DlDGTLl~~~   18 (270)
T PRK10513          3 IKLIAIDMDGTLLLPD   18 (270)
T ss_pred             eEEEEEecCCcCcCCC
Confidence            4688999999999753

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=87.72  E-value=0.98  Score=39.23  Aligned_cols=13  Identities=38%  Similarity=0.455  Sum_probs=11.4

Q ss_pred             EEEeCCCceeccc
Q 027383          114 VVLDLDETLVCAY  126 (224)
Q Consensus       114 LVLDLDETLVhs~  126 (224)
                      +++||||||++..
T Consensus         2 i~~DlDGTll~~~   14 (256)
T TIGR01486         2 IFTDLDGTLLDPH   14 (256)
T ss_pred             EEEcCCCCCcCCC
Confidence            7899999999864

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=87.57  E-value=1.5  Score=38.76  Aligned_cols=15  Identities=27%  Similarity=0.297  Sum_probs=12.6

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++|+||||++..
T Consensus         2 k~i~~D~DGtl~~~~   16 (257)
T TIGR01458         2 KGVLLDISGVLYISD   16 (257)
T ss_pred             CEEEEeCCCeEEeCC
Confidence            478999999999763

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=87.41  E-value=1.6  Score=37.78  Aligned_cols=20  Identities=40%  Similarity=0.282  Sum_probs=16.6

Q ss_pred             CCCCCCeeEEEeCCCceecc
Q 027383          106 GQEIEKLTVVLDLDETLVCA  125 (224)
Q Consensus       106 ~~~~~KltLVLDLDETLVhs  125 (224)
                      ....+-+.+++|||+|||--
T Consensus        23 L~~~Gikgvi~DlDNTLv~w   42 (175)
T COG2179          23 LKAHGIKGVILDLDNTLVPW   42 (175)
T ss_pred             HHHcCCcEEEEeccCceecc
Confidence            45567899999999999954

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=87.34  E-value=0.59  Score=38.25  Aligned_cols=50  Identities=22%  Similarity=0.346  Sum_probs=41.9

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      +...||+.++|+++.  +.++|.|++.+.+++.+++.++-.++|+..+..+.
T Consensus        83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~  132 (184)
T TIGR01993        83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDT  132 (184)
T ss_pred             CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeec
Confidence            446799999999998  68999999999999999999876667887765543

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK10444 UMP phosphatase; Provisional

Probab=87.16  E-value=1.6  Score=38.69  Aligned_cols=15  Identities=27%  Similarity=0.388  Sum_probs=12.6

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++|+||||++..
T Consensus         2 ~~v~~DlDGtL~~~~   16 (248)
T PRK10444          2 KNVICDIDGVLMHDN   16 (248)
T ss_pred             cEEEEeCCCceEeCC
Confidence            368999999999864

>PLN02645 phosphoglycolate phosphatase

Probab=87.07  E-value=1.4  Score=40.09  Aligned_cols=15  Identities=20%  Similarity=0.184  Sum_probs=12.9

Q ss_pred             CeeEEEeCCCceecc
Q 027383          111 KLTVVLDLDETLVCA  125 (224)
Q Consensus       111 KltLVLDLDETLVhs  125 (224)
                      -..+++|+||||++.
T Consensus        28 ~~~~~~D~DGtl~~~   42 (311)
T PLN02645         28 VETFIFDCDGVIWKG   42 (311)
T ss_pred             CCEEEEeCcCCeEeC
Confidence            458899999999975

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=87.03  E-value=1.2  Score=35.87  Aligned_cols=48  Identities=21%  Similarity=0.426  Sum_probs=40.9

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRL  216 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL  216 (224)
                      +..+|++.++|+.+.+ .+.++|-|++...+++.+++.++-..+|+..+
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~  119 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIY  119 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEe
Confidence            6789999999999976 48999999999999999999876555565554

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=86.83  E-value=1.5  Score=37.89  Aligned_cols=12  Identities=42%  Similarity=0.689  Sum_probs=10.8

Q ss_pred             EEEeCCCceecc
Q 027383          114 VVLDLDETLVCA  125 (224)
Q Consensus       114 LVLDLDETLVhs  125 (224)
                      +++||||||+..
T Consensus         2 i~~DlDGTLl~~   13 (256)
T TIGR00099         2 IFIDLDGTLLND   13 (256)
T ss_pred             EEEeCCCCCCCC
Confidence            789999999975

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01675 plant-AP plant acid phosphatase

Probab=86.74  E-value=1.8  Score=38.62  Aligned_cols=49  Identities=14%  Similarity=0.216  Sum_probs=36.5

Q ss_pred             eccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCc--cceeeecC
Q 027383          171 ERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENL--FSLRLYRP  219 (224)
Q Consensus       171 ~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~--F~~RLyRd  219 (224)
                      --|+..+|++++.+ -++|++-|.-.+...+...+.|.-.|+  +++-+.|+
T Consensus       121 aip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~  172 (229)
T TIGR01675       121 ALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRG  172 (229)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecC
Confidence            46889999999864 588888898888887777777766653  35556664

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=86.72  E-value=1.4  Score=37.21  Aligned_cols=52  Identities=15%  Similarity=0.050  Sum_probs=45.1

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ....||+.++|+.+.+ -+.++|.|++...+++.+++.+.-.++|+..+.++.
T Consensus        91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~  143 (222)
T PRK10826         91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEK  143 (222)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEccc
Confidence            4577999999999985 599999999999999999999887778888776654

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=86.60  E-value=2.6  Score=35.27  Aligned_cols=29  Identities=7%  Similarity=0.135  Sum_probs=19.3

Q ss_pred             hCceEEEEcCCchhhHHHHHHhhCCCCcc
Q 027383          184 EFADLVLFTAGLEGYARPLVDKIDRENLF  212 (224)
Q Consensus       184 e~fEIvIFTAg~k~YA~~Vld~IDP~~~F  212 (224)
                      +-++++|-|+.....+.++++.+.-..+|
T Consensus        63 ~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f   91 (183)
T PRK09484         63 SGIEVAIITGRKSKLVEDRMTTLGITHLY   91 (183)
T ss_pred             CCCEEEEEeCCCcHHHHHHHHHcCCceee
Confidence            45777777777777777777776543333

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=85.98  E-value=2.6  Score=36.26  Aligned_cols=16  Identities=38%  Similarity=0.449  Sum_probs=13.3

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+...
T Consensus         3 ~kli~~DlDGTLl~~~   18 (272)
T PRK10530          3 YRVIALDLDGTLLTPK   18 (272)
T ss_pred             ccEEEEeCCCceECCC
Confidence            4688999999999653

>PRK06769 hypothetical protein; Validated

Probab=85.55  E-value=1.5  Score=36.40  Aligned_cols=27  Identities=22%  Similarity=0.107  Sum_probs=22.9

Q ss_pred             EeccCHHHHHHHhhh-CceEEEEcCCch
Q 027383          170 FERPGLHEFLKKLAE-FADLVLFTAGLE  196 (224)
Q Consensus       170 ~~RPgL~EFL~~lse-~fEIvIFTAg~k  196 (224)
                      ..-|++.++|+++.+ -+.+.|-|++..
T Consensus        28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~   55 (173)
T PRK06769         28 TLFPFTKASLQKLKANHIKIFSFTNQPG   55 (173)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEECCch
Confidence            456999999999975 589999999874

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=85.43  E-value=2.4  Score=35.62  Aligned_cols=16  Identities=19%  Similarity=0.266  Sum_probs=13.1

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+...
T Consensus         3 ~kli~~DlDGTLl~~~   18 (230)
T PRK01158          3 IKAIAIDIDGTITDKD   18 (230)
T ss_pred             eeEEEEecCCCcCCCC
Confidence            3678999999999653

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=85.12  E-value=1.9  Score=36.07  Aligned_cols=51  Identities=18%  Similarity=0.139  Sum_probs=43.4

Q ss_pred             EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCC--CccceeeecC
Q 027383          169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRE--NLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~--~~F~~RLyRd  219 (224)
                      ....||+.++|+++. +.+.+.|-|++.+.+++.+++.++-.  ++|+..+..+
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~  139 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPS  139 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCC
Confidence            468899999999997 56999999999999999999998765  6777666544

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=84.98  E-value=1.2  Score=35.86  Aligned_cols=50  Identities=20%  Similarity=0.260  Sum_probs=40.2

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      +...||+.++|+++.+. +.+.|-|++  .+++.+++...-.++|+..+..+.
T Consensus        87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~  137 (185)
T TIGR02009        87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADE  137 (185)
T ss_pred             CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhh
Confidence            67899999999999864 888888887  789999988766667777665543

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=84.92  E-value=1.4  Score=36.38  Aligned_cols=48  Identities=21%  Similarity=0.284  Sum_probs=40.8

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRL  216 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL  216 (224)
                      ...+|+..++++.+.+ -+.++|-|++...+++++++.+.-+++|..++
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l  134 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRL  134 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecce
Confidence            4579999999999975 58999999999999999999987766666543

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=84.85  E-value=2.2  Score=36.78  Aligned_cols=53  Identities=9%  Similarity=-0.005  Sum_probs=44.1

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc-ceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF-SLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F-~~RLyRdsC  221 (224)
                      +...||+.++|+++.+. +.+.|-|++.+.+++.+++.+.-.++| +..+..+..
T Consensus        98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~  152 (253)
T TIGR01422        98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDV  152 (253)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccC
Confidence            46789999999999764 999999999999999999998777764 666666553

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=83.93  E-value=2.9  Score=35.85  Aligned_cols=54  Identities=15%  Similarity=0.076  Sum_probs=44.3

Q ss_pred             EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      .+...||+.++|+++.+. +.+.|-|++...+++.+++.++-.++|+.....+++
T Consensus        93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~  147 (229)
T PRK13226         93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTL  147 (229)
T ss_pred             cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcC
Confidence            357799999999999865 899999999999999999988766677766665543

>PLN02954 phosphoserine phosphatase

Probab=83.90  E-value=2.4  Score=35.54  Aligned_cols=46  Identities=26%  Similarity=0.416  Sum_probs=38.3

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCC--Cccce
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRE--NLFSL  214 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~--~~F~~  214 (224)
                      ...+||+.|+|+.+.+ ...++|-|++.+.+++.+++.+.-.  ++|..
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~  131 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFAN  131 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEe
Confidence            4578999999999975 4899999999999999999997533  45654

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=83.87  E-value=3.4  Score=42.61  Aligned_cols=31  Identities=23%  Similarity=0.029  Sum_probs=22.1

Q ss_pred             CCCCCCCCCCCCCCCCeeEEEeCCCceeccc
Q 027383           96 LSDDCGGGGDGQEIEKLTVVLDLDETLVCAY  126 (224)
Q Consensus        96 ~~~~~~~~~~~~~~~KltLVLDLDETLVhs~  126 (224)
                      |++...+--......++.++.||||||++..
T Consensus       401 ~~~~~~~~~~~~~~~~KLIfsDLDGTLLd~d  431 (694)
T PRK14502        401 SRAARPSRLPSSGQFKKIVYTDLDGTLLNPL  431 (694)
T ss_pred             chhhhcccCCCcCceeeEEEEECcCCCcCCC
Confidence            3344444444666788899999999999753

>PHA02597 30

Probab=83.66  E-value=0.65  Score=38.39  Aligned_cols=52  Identities=21%  Similarity=0.101  Sum_probs=35.7

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCC----ccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDREN----LFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~----~F~~RLyRds  220 (224)
                      +...||+.++|+++.+.+.+++-|++.......+.+.+.-.+    +|++.+.-++
T Consensus        73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~  128 (197)
T PHA02597         73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH  128 (197)
T ss_pred             ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc
Confidence            567999999999999878887777776665555665553322    4555554443

2 hypothetical protein; Provisional

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=83.57  E-value=2.8  Score=36.54  Aligned_cols=15  Identities=27%  Similarity=0.335  Sum_probs=12.7

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+...
T Consensus         3 kli~~DlDGTLl~~~   17 (272)
T PRK15126          3 RLAAFDMDGTLLMPD   17 (272)
T ss_pred             cEEEEeCCCcCcCCC
Confidence            578999999999753

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=83.49  E-value=1.8  Score=41.26  Aligned_cols=52  Identities=15%  Similarity=0.231  Sum_probs=44.6

Q ss_pred             EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      +...||+.|+|+++. +.+.+.|-|++.+.+++.+++.++=.++|+..+..+.
T Consensus       329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~  381 (459)
T PRK06698        329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQ  381 (459)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCC
Confidence            567899999999997 4599999999999999999999877777877766554

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=83.43  E-value=0.71  Score=37.51  Aligned_cols=51  Identities=14%  Similarity=0.066  Sum_probs=42.6

Q ss_pred             EeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          170 FERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       170 ~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ..-|+ .+.|+.+.+.+.+.|-|++.+.+++.+++.+.=.++|+..+..+++
T Consensus        88 ~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~  138 (188)
T PRK10725         88 EPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDV  138 (188)
T ss_pred             CCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhc
Confidence            34565 4889999877899999999999999999998777788888877664

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=83.02  E-value=2.4  Score=37.66  Aligned_cols=53  Identities=23%  Similarity=0.342  Sum_probs=44.0

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +..+||+.++|+.+.+ .+.++|.|++.+.+++.+++.++-.++|+..+..+.+
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~  153 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTL  153 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCC
Confidence            4578999999999975 6899999999999999999987766677776665543

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=82.88  E-value=3  Score=36.99  Aligned_cols=14  Identities=21%  Similarity=0.240  Sum_probs=11.8

Q ss_pred             eeEEEeCCCceecc
Q 027383          112 LTVVLDLDETLVCA  125 (224)
Q Consensus       112 ltLVLDLDETLVhs  125 (224)
                      ..+++|+||||++.
T Consensus         3 ~~~~~D~DGtl~~~   16 (279)
T TIGR01452         3 QGFIFDCDGVLWLG   16 (279)
T ss_pred             cEEEEeCCCceEcC
Confidence            36889999999874

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>smart00775 LNS2 LNS2 domain

Probab=82.64  E-value=2.7  Score=34.77  Aligned_cols=28  Identities=21%  Similarity=0.402  Sum_probs=16.9

Q ss_pred             ccCHHHHHHHhhhC-ceEEEEcCCchhhH
Q 027383          172 RPGLHEFLKKLAEF-ADLVLFTAGLEGYA  199 (224)
Q Consensus       172 RPgL~EFL~~lse~-fEIvIFTAg~k~YA  199 (224)
                      .|+..++++++.+. +.+++-|+....-+
T Consensus        29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~   57 (157)
T smart00775       29 HPGVAKLYRDIQNNGYKILYLTARPIGQA   57 (157)
T ss_pred             CHHHHHHHHHHHHcCCeEEEEcCCcHHHH
Confidence            58888888888765 44444444443433

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=82.56  E-value=3  Score=32.76  Aligned_cols=52  Identities=21%  Similarity=0.152  Sum_probs=40.5

Q ss_pred             EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ....||+.++|+.+. +.+.+.|.|++.+.+++.+++.. -...|...+..+++
T Consensus        63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~  115 (154)
T TIGR01549        63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEF  115 (154)
T ss_pred             heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCC
Confidence            445699999999996 45899999999999999999984 22356665555543

HAD subfamilies caused by an overly broad single model.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=82.40  E-value=2.4  Score=40.56  Aligned_cols=54  Identities=17%  Similarity=0.180  Sum_probs=47.1

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcC
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV  222 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~  222 (224)
                      +...||+.|||+.+.+ .+.+.|-|++.+.+++.+++.++=.++|+..+..+++.
T Consensus       215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~  269 (381)
T PLN02575        215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY  269 (381)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC
Confidence            4567999999999975 59999999999999999999988777899888877653

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=82.38  E-value=2.4  Score=36.82  Aligned_cols=51  Identities=18%  Similarity=0.334  Sum_probs=44.7

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      ..++||..|.++.+.+. +.++|.|+|-..++++|.+.+.-+..+.+++-.+
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~  127 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEID  127 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEe
Confidence            78899999999999976 9999999999999999999998876666665444

>PRK11587 putative phosphatase; Provisional

Probab=82.34  E-value=0.75  Score=38.89  Aligned_cols=51  Identities=14%  Similarity=0.022  Sum_probs=37.8

Q ss_pred             EEEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          168 TVFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       168 ~V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      .+...||+.++|+.+. +.+.+.|-|++...+++.+++...- ..|...+..+
T Consensus        81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~  132 (218)
T PRK11587         81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAE  132 (218)
T ss_pred             CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHH
Confidence            3567899999999997 4599999999999988877765542 2344444433

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=81.12  E-value=0.91  Score=38.01  Aligned_cols=16  Identities=44%  Similarity=0.505  Sum_probs=13.9

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      ...+++|+||||+++.
T Consensus         3 ~~~viFD~DGTL~ds~   18 (214)
T PRK13288          3 INTVLFDLDGTLINTN   18 (214)
T ss_pred             ccEEEEeCCCcCccCH
Confidence            4689999999999975

>PRK11590 hypothetical protein; Provisional

Probab=81.05  E-value=0.96  Score=38.45  Aligned_cols=39  Identities=23%  Similarity=0.125  Sum_probs=33.6

Q ss_pred             EEeccCHHHHH-HHhh-hCceEEEEcCCchhhHHHHHHhhC
Q 027383          169 VFERPGLHEFL-KKLA-EFADLVLFTAGLEGYARPLVDKID  207 (224)
Q Consensus       169 V~~RPgL~EFL-~~ls-e~fEIvIFTAg~k~YA~~Vld~ID  207 (224)
                      +..+|+..|.| +.+. +-+.++|-|++.+.|++++++.+.
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~  134 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP  134 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence            45689999999 5676 588999999999999999998755

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=80.82  E-value=0.94  Score=37.78  Aligned_cols=16  Identities=31%  Similarity=0.503  Sum_probs=13.7

Q ss_pred             eeEEEeCCCceecccc
Q 027383          112 LTVVLDLDETLVCAYE  127 (224)
Q Consensus       112 ltLVLDLDETLVhs~e  127 (224)
                      ..+++|+||||+.+..
T Consensus         3 ~~viFDlDGTL~ds~~   18 (221)
T TIGR02253         3 KAIFFDLDDTLIDTSG   18 (221)
T ss_pred             eEEEEeCCCCCcCCCC
Confidence            4789999999999753

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=80.76  E-value=4.1  Score=34.78  Aligned_cols=21  Identities=24%  Similarity=0.293  Sum_probs=16.4

Q ss_pred             CCCCCCeeEEEeCCCceeccc
Q 027383          106 GQEIEKLTVVLDLDETLVCAY  126 (224)
Q Consensus       106 ~~~~~KltLVLDLDETLVhs~  126 (224)
                      ....+=+.||+|+|+||+.-+
T Consensus        36 Lk~~Gik~li~DkDNTL~~~~   56 (168)
T PF09419_consen   36 LKKKGIKALIFDKDNTLTPPY   56 (168)
T ss_pred             hhhcCceEEEEcCCCCCCCCC
Confidence            445567889999999998544

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=80.74  E-value=0.77  Score=41.24  Aligned_cols=49  Identities=16%  Similarity=0.225  Sum_probs=41.5

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeee
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLY  217 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLy  217 (224)
                      +..-||+.++|+++.+ .+.+.|-|++.+.+++.+++.++-.++|+..+.
T Consensus       141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~  190 (273)
T PRK13225        141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQA  190 (273)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEe
Confidence            4557999999999985 589999999999999999999887667765543

>PRK10976 putative hydrolase; Provisional

Probab=80.74  E-value=4.2  Score=35.16  Aligned_cols=15  Identities=40%  Similarity=0.408  Sum_probs=12.9

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+...
T Consensus         3 kli~~DlDGTLl~~~   17 (266)
T PRK10976          3 QVVASDLDGTLLSPD   17 (266)
T ss_pred             eEEEEeCCCCCcCCC
Confidence            578999999999764

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=80.63  E-value=0.89  Score=37.75  Aligned_cols=50  Identities=14%  Similarity=0.170  Sum_probs=41.5

Q ss_pred             eccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          171 ERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       171 ~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ..|+..++|+.+.+. +.+.|-|++.+.+++.+++.+.=..+|+..+..++
T Consensus       107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~  157 (197)
T TIGR01548       107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED  157 (197)
T ss_pred             cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC
Confidence            344569999999865 89999999999999999999876677877776654

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=80.48  E-value=3.4  Score=34.50  Aligned_cols=13  Identities=31%  Similarity=0.378  Sum_probs=10.9

Q ss_pred             EEEeCCCceeccc
Q 027383          114 VVLDLDETLVCAY  126 (224)
Q Consensus       114 LVLDLDETLVhs~  126 (224)
                      +++||||||+...
T Consensus         1 i~~DlDGTLl~~~   13 (225)
T TIGR01482         1 IASDIDGTLTDPN   13 (225)
T ss_pred             CeEeccCccCCCC
Confidence            5899999999753

catalyze the same reaction as SPP.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=80.43  E-value=0.94  Score=37.04  Aligned_cols=14  Identities=36%  Similarity=0.320  Sum_probs=12.1

Q ss_pred             eEEEeCCCceeccc
Q 027383          113 TVVLDLDETLVCAY  126 (224)
Q Consensus       113 tLVLDLDETLVhs~  126 (224)
                      .+++||||||+.+.
T Consensus         2 ~viFDlDGTL~ds~   15 (184)
T TIGR01993         2 VWFFDLDNTLYPHS   15 (184)
T ss_pred             eEEEeCCCCCCCCc
Confidence            58999999999764

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	224
2hhl_A	195	Crystal Structure Of The Human Small Ctd Phosphatas		4e-08
2q5e_A	187	Crystal Structure Of Human Carboxy-Terminal Domain		1e-07
1ta0_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		3e-07
3l0b_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		3e-07
3l0y_A	184	Crystal Structure Of Scp1 Phosphatase D98a Mutant L		3e-07
3l0c_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		3e-07
3pgl_A	180	Crystal Structure Of Human Small C-Terminal Domain		3e-07
2ghq_A	181	Ctd-Specific Phosphatase Scp1 In Complex With Pepti		3e-07
1t9z_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		4e-07

>pdb|2HHL|A Chain A, Crystal Structure Of The Human Small Ctd Phosphatase 3 Isoform 1 Length = 195

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
           E DG   I+ V V +RP + EFL+++ +  + VLFTA L  YA P+ D +DR  +F  RL
Sbjct: 57  EIDGT--IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARL 114
Query: 217 YRPSTV 222
           +R S V
Sbjct: 115 FRESCV 120

>pdb|2Q5E|A Chain A, Crystal Structure Of Human Carboxy-Terminal Domain Rna Polymerase Ii Polypeptide A Small Phosphatase 2 Length = 187

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 167 VTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222
           V V +RP + EFL+++ E  + VLFTA L  YA P+ D +DR  +F  RL+R S V
Sbjct: 54  VYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESCV 109

>pdb|1TA0|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein With Associated Ligand Length = 197

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
           E DG   ++ V V +RP + EFL+++ E  + VLFTA L  YA P+ D +D+   F  RL
Sbjct: 44  EIDGV--VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARL 101
Query: 217 YRPSTV 222
           +R S V
Sbjct: 102 FRESCV 107

>pdb|3L0B|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant Phosphory Intermediate Length = 184

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
           E DG   ++ V V +RP + EFL+++ E  + VLFTA L  YA P+ D +D+   F  RL
Sbjct: 47  EIDGV--VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARL 104
Query: 217 YRPSTV 222
           +R S V
Sbjct: 105 FRESCV 110

>pdb|3L0Y|A Chain A, Crystal Structure Of Scp1 Phosphatase D98a Mutant Length = 184

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
           E DG   ++ V V +RP + EFL+++ E  + VLFTA L  YA P+ D +D+   F  RL
Sbjct: 47  EIDGV--VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARL 104
Query: 217 YRPSTV 222
           +R S V
Sbjct: 105 FRESCV 110

>pdb|3L0C|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant With Trap Inorganic Phosphate Length = 184

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
           E DG   ++ V V +RP + EFL+++ E  + VLFTA L  YA P+ D +D+   F  RL
Sbjct: 47  EIDGV--VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARL 104
Query: 217 YRPSTV 222
           +R S V
Sbjct: 105 FRESCV 110

>pdb|3PGL|A Chain A, Crystal Structure Of Human Small C-Terminal Domain Phosphatase 1 (Scp1) Bound To Rabeprazole Length = 180

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
           E DG   ++ V V +RP + EFL+++ E  + VLFTA L  YA P+ D +D+   F  RL
Sbjct: 43  EIDGV--VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARL 100
Query: 217 YRPSTV 222
           +R S V
Sbjct: 101 FRESCV 106

>pdb|2GHQ|A Chain A, Ctd-Specific Phosphatase Scp1 In Complex With Peptide C- Terminal Domain Of Rna Polymerase Ii Length = 181

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
           E DG   ++ V V +RP + EFL+++ E  + VLFTA L  YA P+ D +D+   F  RL
Sbjct: 44  EIDGV--VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARL 101
Query: 217 YRPSTV 222
           +R S V
Sbjct: 102 FRESCV 107

>pdb|1T9Z|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein Length = 197

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 157 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216
           E DG   ++ V V +RP + EFL++  E  + VLFTA L  YA P+ D +D+   F  RL
Sbjct: 44  EIDGV--VHQVYVLKRPHVDEFLQRXGELFECVLFTASLAKYADPVADXLDKWGAFRARL 101
Query: 217 YRPSTV 222
           +R S V
Sbjct: 102 FRESCV 107

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	224
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	7e-25
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	2e-24
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	6e-23
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	1e-22
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	5e-19
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	6e-11
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	4e-04

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} Length = 195

 Score = 95.9 bits (239), Expect = 7e-25
 Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 19/114 (16%)

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
           K  VV+DLDETLV +       A             F +                 V V 
Sbjct: 28  KKCVVIDLDETLVHSSFKPISNA------------DFIVPVEIDGTIHQ-------VYVL 68

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           +RP + EFL+++ +  + VLFTA L  YA P+ D +DR  +F  RL+R S V  
Sbjct: 69  KRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFH 122

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A Length = 181

 Score = 94.3 bits (235), Expect = 2e-24
 Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 19/114 (16%)

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
           K+ VV++LDETLV +       A             F +                 V V 
Sbjct: 15  KICVVINLDETLVHSSFKPVNNA------------DFIIPVEIDGVVHQ-------VYVL 55

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           +RP + EFL+++ E  + VLFTA L  YA P+ D +D+   F  RL+R S V  
Sbjct: 56  KRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH 109

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} Length = 372

 Score = 94.1 bits (233), Expect = 6e-23
 Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTV 169
           ++L++++DLD+T++ A    ++   +          L ++   +  +   G     Y+  
Sbjct: 17  KRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKF 76

Query: 170 FERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDREN-LFSLRLYR 218
             RPGL +FL+K++E  +L ++T G + YA+ +   ID    LF  R+  
Sbjct: 77  --RPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLS 124

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} Length = 204

 Score = 90.5 bits (225), Expect = 1e-22
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 35/115 (30%)

Query: 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVF 170
            LT+V+ L++ LV                                   +   K  +    
Sbjct: 34  PLTLVITLEDFLVH---------------------------------SEWSQKHGW-RTA 59

Query: 171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDREN-LFSLRLYRPSTVST 224
           +RPG   FL  L+++ ++VLF++    Y+  + +K+D  +   S  L++   V  
Sbjct: 60  KRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYK 114

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} Length = 442

 Score = 83.9 bits (206), Expect = 5e-19
 Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 4/119 (3%)

Query: 107 QEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINY 166
           ++ ++L++++ LD+T++ A    ++   +          L ++   +  +   G     Y
Sbjct: 22  RQEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYY 81

Query: 167 VTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDREN-LFSLR-LYRPSTVS 223
           +    RPGL +FL+K++E  +L ++T G + YA+ +   ID    LF  R L R  + S
Sbjct: 82  IKF--RPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS 138

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} Length = 320

 Score = 59.8 bits (144), Expect = 6e-11
 Identities = 13/60 (21%), Positives = 25/60 (41%)

Query: 158 CDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLY 217
            D +      T   RP LHEFL    E  D+V+++A    +    +  +   +  + ++ 
Sbjct: 152 FDHRSPAETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVM 211

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.8 bits (89), Expect = 4e-04
 Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 11/39 (28%)

Query: 107 QEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLK 145
           Q ++KL   L L       Y   S PA+    A +A ++
Sbjct: 20  QALKKLQASLKL-------YADDSAPAL----AIKATME 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	224
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	99.9
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	99.9
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	99.88
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	99.87
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.87
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	99.83
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	97.64
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	97.36
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	97.36
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	97.35
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	97.2
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	97.12
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	96.88
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	96.87
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	96.86
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	96.74
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	96.7
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	96.63
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	96.54
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	96.5
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	96.05
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	95.92
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	95.84
3mn1_A	189	Probable YRBI family phosphatase; structural genom	95.65
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	95.62
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	95.43
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	95.34
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	95.18
3mmz_A	176	Putative HAD family hydrolase; structural genomics	95.16
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	94.96
2o2x_A	218	Hypothetical protein; structural genomics, joint c	94.95
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	94.56
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	94.2
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	93.85
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	93.79
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	93.56
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	93.33
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	93.33
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	92.84
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	92.78
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	92.11
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	91.76
2hsz_A	243	Novel predicted phosphatase; structural genomics,	91.68
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	91.63
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	91.6
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	91.36
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	91.25
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	91.22
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	90.83
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	90.81
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	90.76
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	90.46
2zg6_A	220	Putative uncharacterized protein ST2620, probable	90.26
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	90.25
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	90.16
2hsz_A	243	Novel predicted phosphatase; structural genomics,	90.16
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	90.15
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	90.13
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	90.07
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	89.94
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	89.9
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	89.87
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	89.79
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	89.7
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	89.5
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	89.32
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	89.29
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	89.18
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	89.06
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	89.06
3fvv_A	232	Uncharacterized protein; unknown function, structu	88.96
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	88.96
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	88.95
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	88.86
1te2_A	226	Putative phosphatase; structural genomics, phospha	88.69
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	88.6
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	88.22
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	88.03
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	87.71
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	87.55
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	87.43
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	87.43
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	87.4
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	87.31
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	87.11
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	87.01
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	86.85
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	86.83
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	86.74
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	86.66
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	86.4
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	85.9
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	85.88
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	85.68
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	85.64
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	85.62
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	84.99
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	84.58
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	84.54
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	84.46
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	84.36
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	84.28
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	84.28
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	84.24
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	84.11
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	83.97
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	83.97
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	83.91
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	83.77
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	83.63
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	83.62
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	83.32
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	83.31
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	83.31
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	83.21
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	83.19
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	83.18
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	83.18
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	83.11
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	83.1
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	83.06
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	83.06
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	83.02
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	83.0
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	83.0
1te2_A	226	Putative phosphatase; structural genomics, phospha	82.97
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	82.96
3fvv_A	232	Uncharacterized protein; unknown function, structu	82.89
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	82.81
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	82.65
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	82.58
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	82.57
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	82.51
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	82.36
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	82.24
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	82.16
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	82.14
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	82.12
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	82.1
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	82.08
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	82.0
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	81.91
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	81.88
3dao_A	283	Putative phosphatse; structural genomics, joint ce	81.61
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	81.48
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	81.43
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	81.41
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	81.27
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	81.21
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	81.14
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	81.02
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	81.01
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	80.84
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	80.76
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	80.74
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	80.7
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	80.66
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	80.64
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	80.6
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	80.55
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	80.46
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	80.41
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	80.19
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	80.17

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=99.90  E-value=3.9e-24  Score=201.95  Aligned_cols=109  Identities=26%  Similarity=0.462  Sum_probs=84.5

Q ss_pred             CCCCeeEEEeCCCceeccccCCCchHHhh---hhHhh--hccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHh
Q 027383          108 EIEKLTVVLDLDETLVCAYETSSLPAIIR---TQAAE--AGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKL  182 (224)
Q Consensus       108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r---~q~~e--agl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~l  182 (224)
                      ..+|++||||||||||||...+...++.+   ++..+  .++..|.+     +...+|.  ...+||++|||+++||+++
T Consensus        23 ~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l-----~~~~~~~--~~~~~V~~RPgl~eFL~~l   95 (442)
T 3ef1_A           23 QEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNL-----QEGPSGY--TSCYYIKFRPGLAQFLQKI   95 (442)
T ss_dssp             HTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEE-----EETTTTE--EEEEEEEECTTHHHHHHHH
T ss_pred             hcCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceee-----eeccCCc--eeEEEEEeCCCHHHHHHHH
Confidence            45899999999999999965432222211   00001  12334655     3445564  5789999999999999999


Q ss_pred             hhCceEEEEcCCchhhHHHHHHhhCCCC-ccceeee-cCCcCC
Q 027383          183 AEFADLVLFTAGLEGYARPLVDKIDREN-LFSLRLY-RPSTVS  223 (224)
Q Consensus       183 se~fEIvIFTAg~k~YA~~Vld~IDP~~-~F~~RLy-RdsC~~  223 (224)
                      +++|||+|||||.+.||++|++.|||++ +|++|+| |++|..
T Consensus        96 s~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~  138 (442)
T 3ef1_A           96 SELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS  138 (442)
T ss_dssp             TTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSC
T ss_pred             hCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCC
Confidence            9999999999999999999999999998 8999987 999963

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=99.90  E-value=4.3e-24  Score=183.13  Aligned_cols=82  Identities=26%  Similarity=0.408  Sum_probs=72.0

Q ss_pred             CCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCc
Q 027383          107 QEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFA  186 (224)
Q Consensus       107 ~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~f  186 (224)
                      .+++|+||||||||||||+...   +                               ...+++++|||++|||++++++|
T Consensus        30 ~~~~~~tLVLDLDeTLvh~~~~---~-------------------------------~~~~~v~~RPgl~eFL~~l~~~y   75 (204)
T 3qle_A           30 PYQRPLTLVITLEDFLVHSEWS---Q-------------------------------KHGWRTAKRPGADYFLGYLSQYY   75 (204)
T ss_dssp             --CCSEEEEEECBTTTEEEEEE---T-------------------------------TTEEEEEECTTHHHHHHHHTTTE
T ss_pred             ccCCCeEEEEeccccEEeeecc---c-------------------------------cCceeEEeCCCHHHHHHHHHhCC
Confidence            3468999999999999998421   0                               12468999999999999999999


Q ss_pred             eEEEEcCCchhhHHHHHHhhCCCC-ccceeeecCCcC
Q 027383          187 DLVLFTAGLEGYARPLVDKIDREN-LFSLRLYRPSTV  222 (224)
Q Consensus       187 EIvIFTAg~k~YA~~Vld~IDP~~-~F~~RLyRdsC~  222 (224)
                      ||+|||||.+.||++|++.|||.+ +|++||||++|.
T Consensus        76 eivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~  112 (204)
T 3qle_A           76 EIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCV  112 (204)
T ss_dssp             EEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSE
T ss_pred             EEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEeccee
Confidence            999999999999999999999986 899999999996

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=99.88  E-value=3.6e-23  Score=171.81  Aligned_cols=97  Identities=40%  Similarity=0.609  Sum_probs=80.0

Q ss_pred             CCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCc
Q 027383          107 QEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFA  186 (224)
Q Consensus       107 ~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~f  186 (224)
                      ...+|+||||||||||||+......           +. .|.+     +++++|.  ...+++++|||++|||++++++|
T Consensus        11 ~~~~k~~LVLDLD~TLvhs~~~~~~-----------~~-d~~~-----~~~~~~~--~~~~~v~~rPg~~efL~~l~~~~   71 (181)
T 2ght_A           11 QDSDKICVVINLDETLVHSSFKPVN-----------NA-DFII-----PVEIDGV--VHQVYVLKRPHVDEFLQRMGELF   71 (181)
T ss_dssp             GGTTSCEEEECCBTTTEEEESSCCS-----------SC-SEEE-----EEEETTE--EEEEEEEECTTHHHHHHHHHHHS
T ss_pred             ccCCCeEEEECCCCCeECCcccCCC-----------Cc-ccee-----eeeeCCe--eEEEEEEeCCCHHHHHHHHHhCC
Confidence            3458999999999999998532110           11 2332     3345564  46789999999999999999999


Q ss_pred             eEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcC
Q 027383          187 DLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV  222 (224)
Q Consensus       187 EIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~  222 (224)
                      |++|||++.+.||+++++.|||.++|++|++|++|.
T Consensus        72 ~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~  107 (181)
T 2ght_A           72 ECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV  107 (181)
T ss_dssp             EEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSE
T ss_pred             CEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCce
Confidence            999999999999999999999999999999999995

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=99.87  E-value=1.2e-22  Score=187.69  Aligned_cols=109  Identities=27%  Similarity=0.465  Sum_probs=82.8

Q ss_pred             CCCCeeEEEeCCCceeccccCCCchHHhh---h--hHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHh
Q 027383          108 EIEKLTVVLDLDETLVCAYETSSLPAIIR---T--QAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKL  182 (224)
Q Consensus       108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r---~--q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~l  182 (224)
                      ..+|++||||||||||||...+.+..|.+   +  .....++..|.+     +....|.  .+.++|++|||++|||+++
T Consensus        15 ~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~-----~~~~~~~--~~~~~v~~RPg~~eFL~~l   87 (372)
T 3ef0_A           15 QEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNL-----QEGPSGY--TSCYYIKFRPGLAQFLQKI   87 (372)
T ss_dssp             HHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEE-----EETTTTE--EEEEEEEECTTHHHHHHHH
T ss_pred             hCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceee-----eeccCCc--eEEEEEEECcCHHHHHHHH
Confidence            34899999999999999964332222211   0  000122334554     2233443  5789999999999999999


Q ss_pred             hhCceEEEEcCCchhhHHHHHHhhCCCC-ccceeee-cCCcCC
Q 027383          183 AEFADLVLFTAGLEGYARPLVDKIDREN-LFSLRLY-RPSTVS  223 (224)
Q Consensus       183 se~fEIvIFTAg~k~YA~~Vld~IDP~~-~F~~RLy-RdsC~~  223 (224)
                      +++|||+||||+.+.||++|++.|||++ +|++|++ |++|..
T Consensus        88 ~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~  130 (372)
T 3ef0_A           88 SELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS  130 (372)
T ss_dssp             HTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC
T ss_pred             hcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC
Confidence            9999999999999999999999999998 8999987 999953

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.87  E-value=2.1e-22  Score=169.85  Aligned_cols=96  Identities=42%  Similarity=0.617  Sum_probs=79.6

Q ss_pred             CCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCce
Q 027383          108 EIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFAD  187 (224)
Q Consensus       108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~fE  187 (224)
                      ..+|+||||||||||||+.....           .+. .|.+     +++++|.  ...+++++|||++|||++++++||
T Consensus        25 ~~~k~~LVLDLD~TLvhs~~~~~-----------~~~-d~~~-----~~~~~g~--~~~~~v~~RPgv~efL~~l~~~~~   85 (195)
T 2hhl_A           25 DYGKKCVVIDLDETLVHSSFKPI-----------SNA-DFIV-----PVEIDGT--IHQVYVLKRPHVDEFLQRMGQLFE   85 (195)
T ss_dssp             GTTCCEEEECCBTTTEEEESSCC-----------TTC-SEEE-----EEEETTE--EEEEEEEECTTHHHHHHHHHHHSE
T ss_pred             cCCCeEEEEccccceEcccccCC-----------CCc-ccee-----eeecCCc--eeeEEEEeCcCHHHHHHHHHcCCe
Confidence            45899999999999999853210           011 2333     3345564  467899999999999999999999


Q ss_pred             EEEEcCCchhhHHHHHHhhCCCCccceeeecCCcC
Q 027383          188 LVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV  222 (224)
Q Consensus       188 IvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~  222 (224)
                      ++|||++.+.||+++++.||+.++|++|++|++|.
T Consensus        86 i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~  120 (195)
T 2hhl_A           86 CVLFTASLAKYADPVADLLDRWGVFRARLFRESCV  120 (195)
T ss_dssp             EEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCE
T ss_pred             EEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccce
Confidence            99999999999999999999999999999999996

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=99.83  E-value=1.1e-21  Score=178.10  Aligned_cols=82  Identities=27%  Similarity=0.285  Sum_probs=71.1

Q ss_pred             CCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhC
Q 027383          106 GQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEF  185 (224)
Q Consensus       106 ~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~  185 (224)
                      +.+.+|+||||||||||||+....                                   ..+++++|||+++||++++++
T Consensus       135 p~~~~k~tLVLDLDeTLvh~~~~~-----------------------------------~~~~~~~RP~l~eFL~~l~~~  179 (320)
T 3shq_A          135 PPREGKKLLVLDIDYTLFDHRSPA-----------------------------------ETGTELMRPYLHEFLTSAYED  179 (320)
T ss_dssp             CCCTTCEEEEECCBTTTBCSSSCC-----------------------------------SSHHHHBCTTHHHHHHHHHHH
T ss_pred             CCcCCCcEEEEeccccEEcccccC-----------------------------------CCcceEeCCCHHHHHHHHHhC
Confidence            445589999999999999973110                                   113578999999999999999


Q ss_pred             ceEEEEcCCchhhHHHHHHhhCCCCc--cceeeecCCcC
Q 027383          186 ADLVLFTAGLEGYARPLVDKIDRENL--FSLRLYRPSTV  222 (224)
Q Consensus       186 fEIvIFTAg~k~YA~~Vld~IDP~~~--F~~RLyRdsC~  222 (224)
                      |||+||||+.+.||++|++.|||.+.  |++|+||++|.
T Consensus       180 yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~  218 (320)
T 3shq_A          180 YDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTA  218 (320)
T ss_dssp             EEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGG
T ss_pred             CEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCc
Confidence            99999999999999999999999973  89999999995

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=97.64  E-value=0.00015  Score=57.99  Aligned_cols=54  Identities=15%  Similarity=0.140  Sum_probs=45.9

Q ss_pred             EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      .....|++.++|+.+.+. +.++|.|++...+++.+++.+.-..+|+..+..+.+
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~  155 (231)
T 3kzx_A          101 NFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDT  155 (231)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSS
T ss_pred             cceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEccccc
Confidence            356799999999999976 999999999999999999998776678777765543

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=97.36  E-value=3.7e-05  Score=56.82  Aligned_cols=46  Identities=9%  Similarity=0.182  Sum_probs=35.5

Q ss_pred             ccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeee
Q 027383          172 RPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLY  217 (224)
Q Consensus       172 RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLy  217 (224)
                      .|++.++|+++.+. +.++|.|++...+++.+++.+.-..+|+..+.
T Consensus        20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~   66 (137)
T 2pr7_A           20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLL   66 (137)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEE
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEE
Confidence            46788888888865 88999999998888888887755555665554

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=97.36  E-value=0.00038  Score=55.54  Aligned_cols=47  Identities=23%  Similarity=0.159  Sum_probs=41.3

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCc-hhhHHHHHHhhCCCCcccee
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGL-EGYARPLVDKIDRENLFSLR  215 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~-k~YA~~Vld~IDP~~~F~~R  215 (224)
                      +...|++.++|+++.+. +.++|.|++. +.+++.+++.++-..+|+..
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~  115 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHR  115 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEE
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhccee
Confidence            56789999999999865 9999999999 79999999998877777765

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=97.35  E-value=0.00031  Score=56.24  Aligned_cols=53  Identities=13%  Similarity=0.174  Sum_probs=45.7

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCch---hhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLE---GYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k---~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...||+.++|+++.+. +.++|.|++..   .+++.+++.+.-..+|+..+..+.+
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~   89 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSE   89 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTT
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccc
Confidence            45789999999999876 99999999987   8999999998877788888877653

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=97.20  E-value=0.0012  Score=52.14  Aligned_cols=53  Identities=23%  Similarity=0.211  Sum_probs=44.3

Q ss_pred             EEEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc--ceeeecC
Q 027383          167 VTVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF--SLRLYRP  219 (224)
Q Consensus       167 v~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F--~~RLyRd  219 (224)
                      -.....|++.++|+.+.+. +.++|.|++...+++.+++.+.-..+|  +..+..+
T Consensus        67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~  122 (205)
T 3m9l_A           67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRD  122 (205)
T ss_dssp             EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTT
T ss_pred             hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCC
Confidence            3567899999999999976 999999999999999999998766667  5555443

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=97.12  E-value=0.00013  Score=58.36  Aligned_cols=53  Identities=21%  Similarity=0.207  Sum_probs=45.3

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ....|++.++|+.+.+. +.++|.|++...+++.+++.+.-..+|+..+..+.+
T Consensus       103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  156 (237)
T 4ex6_A          103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSV  156 (237)
T ss_dssp             GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTS
T ss_pred             CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCC
Confidence            34789999999999975 999999999999999999998766678877776654

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=96.88  E-value=0.0032  Score=49.12  Aligned_cols=46  Identities=13%  Similarity=0.140  Sum_probs=36.0

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCch---------------hhHHHHHHhhCCCCccceee
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLE---------------GYARPLVDKIDRENLFSLRL  216 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k---------------~YA~~Vld~IDP~~~F~~RL  216 (224)
                      +...|++.++|+++.+. +.++|.|++..               .+++.+++.+.  ..|+..+
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~   87 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIF   87 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEE
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEE
Confidence            34579999999999876 99999999987               67777777776  2345444

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=96.87  E-value=0.0023  Score=51.12  Aligned_cols=77  Identities=21%  Similarity=0.223  Sum_probs=53.8

Q ss_pred             CCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhC-c
Q 027383          108 EIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEF-A  186 (224)
Q Consensus       108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~-f  186 (224)
                      ....+.+++|+|+||+.....                 .|..         .+.   .  .+...|++.++|+++.+. +
T Consensus        11 ~~~~k~~~~D~Dgtl~~~~~~-----------------~~~~---------~~~---~--~~~~~pg~~e~L~~L~~~G~   59 (176)
T 2fpr_A           11 GSSQKYLFIDRDGTLISEPPS-----------------DFQV---------DRF---D--KLAFEPGVIPQLLKLQKAGY   59 (176)
T ss_dssp             --CCEEEEECSBTTTBCCC-------------------CCCC---------CSG---G--GCCBCTTHHHHHHHHHHTTE
T ss_pred             CCcCcEEEEeCCCCeEcCCCC-----------------CcCc---------CCH---H--HCcCCccHHHHHHHHHHCCC
Confidence            346789999999999975210                 0100         000   0  145689999999999875 9


Q ss_pred             eEEEEcCC---------------chhhHHHHHHhhCCCCccceeee
Q 027383          187 DLVLFTAG---------------LEGYARPLVDKIDRENLFSLRLY  217 (224)
Q Consensus       187 EIvIFTAg---------------~k~YA~~Vld~IDP~~~F~~RLy  217 (224)
                      .++|.|++               .+.+++.+++.+.-.  |+..++
T Consensus        60 ~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~  103 (176)
T 2fpr_A           60 KLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLI  103 (176)
T ss_dssp             EEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEE
T ss_pred             EEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEE
Confidence            99999999               678888888887654  666543

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=96.86  E-value=0.0019  Score=49.81  Aligned_cols=44  Identities=9%  Similarity=-0.016  Sum_probs=36.8

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF  212 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F  212 (224)
                      -...|+..++|+++.+. +.++|.|++...+++.+++.+.-..+|
T Consensus        35 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~   79 (162)
T 2p9j_A           35 KVFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIY   79 (162)
T ss_dssp             EEEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEE
T ss_pred             eeecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhc
Confidence            44578889999999865 999999999999999999988654444

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=96.74  E-value=0.0055  Score=50.24  Aligned_cols=46  Identities=17%  Similarity=0.217  Sum_probs=39.6

Q ss_pred             EeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcccee
Q 027383          170 FERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLR  215 (224)
Q Consensus       170 ~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~R  215 (224)
                      ..+|++.++|+.+.+. +.+.|.|++.+.+++.+++.+.-..+|...
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~  190 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEV  190 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSC
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhc
Confidence            6899999999999874 999999999999999999998766555443

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=96.70  E-value=0.0014  Score=52.41  Aligned_cols=38  Identities=16%  Similarity=0.309  Sum_probs=33.0

Q ss_pred             EEeccCHHHHHHHhhhC--ceEEEEcCCchhhHHHHHHhh
Q 027383          169 VFERPGLHEFLKKLAEF--ADLVLFTAGLEGYARPLVDKI  206 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~--fEIvIFTAg~k~YA~~Vld~I  206 (224)
                      +...||+.++|+++.+.  +.++|-|++.+.+++.+++.+
T Consensus        72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~  111 (193)
T 2i7d_A           72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKY  111 (193)
T ss_dssp             CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHH
T ss_pred             CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHh
Confidence            45789999999999974  999999999998888877764

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=96.63  E-value=0.0053  Score=50.07  Aligned_cols=45  Identities=13%  Similarity=0.079  Sum_probs=36.3

Q ss_pred             EeccCHHHHHHHhhhC-ceEEEEcCCc---------------hhhHHHHHHhhCCCCccceee
Q 027383          170 FERPGLHEFLKKLAEF-ADLVLFTAGL---------------EGYARPLVDKIDRENLFSLRL  216 (224)
Q Consensus       170 ~~RPgL~EFL~~lse~-fEIvIFTAg~---------------k~YA~~Vld~IDP~~~F~~RL  216 (224)
                      ...|++.++|+++.+. +.++|.|++.               ..+++.+++.+.-.  |...+
T Consensus        50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~  110 (211)
T 2gmw_A           50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIY  110 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEE
T ss_pred             cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEE
Confidence            4579999999999865 9999999999               58899999887544  55443

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=96.54  E-value=0.0032  Score=52.42  Aligned_cols=52  Identities=21%  Similarity=0.169  Sum_probs=45.0

Q ss_pred             EEeccCHHHHHHHhhh-Cc--eEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAE-FA--DLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~f--EIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      +...|++.++|+.+.+ .+  .+.|.|++.+.+++.+++.+.-..+|+..++.+.
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~  195 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDY  195 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCC
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEecc
Confidence            5578999999999986 57  9999999999999999999887778888776544

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=96.50  E-value=0.0052  Score=54.29  Aligned_cols=48  Identities=19%  Similarity=0.299  Sum_probs=42.1

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRL  216 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL  216 (224)
                      +..+||+.++|+++.+. +.++|-|++...+++.+++.+.-..+|+..+
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l  226 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTV  226 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECE
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEE
Confidence            46899999999999876 9999999999999999999987766666554

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=96.05  E-value=0.012  Score=46.75  Aligned_cols=43  Identities=9%  Similarity=-0.029  Sum_probs=35.2

Q ss_pred             EeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCcc
Q 027383          170 FERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLF  212 (224)
Q Consensus       170 ~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F  212 (224)
                      .+.|...+.|+++.+ -+.++|-|+....+++.+++.+.-..+|
T Consensus        35 ~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~   78 (180)
T 1k1e_A           35 SFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFF   78 (180)
T ss_dssp             EEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEE
T ss_pred             eeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceee
Confidence            356677789999975 4999999999999999999988755444

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=95.92  E-value=0.0035  Score=48.47  Aligned_cols=35  Identities=14%  Similarity=0.079  Sum_probs=29.3

Q ss_pred             HHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc
Q 027383          178 FLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF  212 (224)
Q Consensus       178 FL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F  212 (224)
                      .|+.+.+. +.++|.|++...+++.+++.+.-..+|
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~   74 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLF   74 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEE
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEee
Confidence            78888764 999999999999999999988655444

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=95.84  E-value=0.02  Score=52.29  Aligned_cols=82  Identities=21%  Similarity=0.287  Sum_probs=55.1

Q ss_pred             CCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhC-ce
Q 027383          109 IEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEF-AD  187 (224)
Q Consensus       109 ~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~-fE  187 (224)
                      ...+.+++|+||||+.+....                .|.-         ...     -+...-||+.++|+.+.+. |.
T Consensus        56 ~~~k~v~fD~DGTL~~~~~~~----------------~~~~---------~~~-----~~~~~~pgv~e~L~~L~~~G~~  105 (416)
T 3zvl_A           56 PQGKVAAFDLDGTLITTRSGK----------------VFPT---------SPS-----DWRILYPEIPKKLQELAAEGYK  105 (416)
T ss_dssp             CCSSEEEECSBTTTEECSSCS----------------SSCS---------STT-----CCEESCTTHHHHHHHHHHTTCE
T ss_pred             CCCeEEEEeCCCCccccCCCc----------------cCCC---------CHH-----HhhhhcccHHHHHHHHHHCCCe
Confidence            356789999999999753100                0100         000     0233679999999999865 99


Q ss_pred             EEEEcCCc------------hhhHHHHHHhhCCCCccceeeecCCcC
Q 027383          188 LVLFTAGL------------EGYARPLVDKIDRENLFSLRLYRPSTV  222 (224)
Q Consensus       188 IvIFTAg~------------k~YA~~Vld~IDP~~~F~~RLyRdsC~  222 (224)
                      ++|.|+..            ..+++.+++.+.-.  |+..+..+.|.
T Consensus       106 l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~  150 (416)
T 3zvl_A          106 LVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGL  150 (416)
T ss_dssp             EEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSST
T ss_pred             EEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCC
Confidence            99999966            33477777777543  77777666654

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=95.65  E-value=0.013  Score=47.13  Aligned_cols=36  Identities=14%  Similarity=0.125  Sum_probs=30.4

Q ss_pred             HHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccc
Q 027383          178 FLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFS  213 (224)
Q Consensus       178 FL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~  213 (224)
                      +|+++.+ -+.++|-|++.+..++.+++.+.-..+|.
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~   90 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQ   90 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEEC
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhc
Confidence            8888876 49999999999999999999987655443

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=95.62  E-value=0.014  Score=47.64  Aligned_cols=46  Identities=20%  Similarity=0.186  Sum_probs=34.1

Q ss_pred             EeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          170 FERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       170 ~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ...||+.++|+++.+ -+.+.|-|+..+..+..+++     .+|+..+..++
T Consensus        36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-----~~~d~v~~~~~   82 (196)
T 2oda_A           36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-----PVNDWMIAAPR   82 (196)
T ss_dssp             SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-----TTTTTCEECCC
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-----ccCCEEEECCc
Confidence            457999999999975 59999999998888866554     23454444443

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=95.43  E-value=0.025  Score=48.74  Aligned_cols=35  Identities=17%  Similarity=0.188  Sum_probs=26.8

Q ss_pred             EeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHH
Q 027383          170 FERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVD  204 (224)
Q Consensus       170 ~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld  204 (224)
                      ..-||..++|+.+.+. +.++|-|+........+.+
T Consensus       101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~  136 (258)
T 2i33_A          101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIK  136 (258)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHH
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH
Confidence            4579999999999865 9999999988444444433

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=95.34  E-value=0.0082  Score=54.10  Aligned_cols=47  Identities=15%  Similarity=0.238  Sum_probs=41.1

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcccee
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLR  215 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~R  215 (224)
                      +..+||+.++|+.+.+. +.++|.|++...+++.+++.+.-..+|.+.
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~  302 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANE  302 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEEC
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeee
Confidence            46899999999999976 999999999999999999998766555544

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=95.18  E-value=0.0085  Score=49.31  Aligned_cols=34  Identities=9%  Similarity=0.151  Sum_probs=28.2

Q ss_pred             HHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCcc
Q 027383          179 LKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLF  212 (224)
Q Consensus       179 L~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F  212 (224)
                      |+.+.+ -+.+.|-|++....++.+++.+.-..+|
T Consensus        61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~   95 (195)
T 3n07_A           61 VKALMNAGIEIAIITGRRSQIVENRMKALGISLIY   95 (195)
T ss_dssp             HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEE
T ss_pred             HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEe
Confidence            777775 4999999999999999999998655444

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=95.16  E-value=0.032  Score=44.40  Aligned_cols=32  Identities=6%  Similarity=0.037  Sum_probs=27.7

Q ss_pred             HHHHhhh-CceEEEEcCCchhhHHHHHHhhCCC
Q 027383          178 FLKKLAE-FADLVLFTAGLEGYARPLVDKIDRE  209 (224)
Q Consensus       178 FL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~  209 (224)
                      +|+++.+ -+.++|-|++...+++.+++.+.-.
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~   79 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP   79 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence            7888875 4999999999999999999987644

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=94.96  E-value=0.028  Score=46.84  Aligned_cols=41  Identities=15%  Similarity=0.186  Sum_probs=32.2

Q ss_pred             eccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccc
Q 027383          171 ERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFS  213 (224)
Q Consensus       171 ~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~  213 (224)
                      .++++  +|+.+.+ -+.+.|-|+.....++.+++.+.-..+|.
T Consensus        79 ~~d~~--~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~  120 (211)
T 3ij5_A           79 VRDGY--GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQ  120 (211)
T ss_dssp             HHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEEC
T ss_pred             cchHH--HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhc
Confidence            34444  8888875 49999999999999999999987654443

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=94.95  E-value=0.034  Score=45.12  Aligned_cols=38  Identities=16%  Similarity=0.117  Sum_probs=32.2

Q ss_pred             EeccCHHHHHHHhhh-CceEEEEcCCch---------------hhHHHHHHhhC
Q 027383          170 FERPGLHEFLKKLAE-FADLVLFTAGLE---------------GYARPLVDKID  207 (224)
Q Consensus       170 ~~RPgL~EFL~~lse-~fEIvIFTAg~k---------------~YA~~Vld~ID  207 (224)
                      ...|++.++|+++.+ -+.++|.|++..               .+++.+++.+.
T Consensus        56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  109 (218)
T 2o2x_A           56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEG  109 (218)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTT
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcC
Confidence            357999999999985 599999999998               68888887764

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=94.56  E-value=0.015  Score=47.16  Aligned_cols=34  Identities=12%  Similarity=0.229  Sum_probs=27.7

Q ss_pred             HHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc
Q 027383          179 LKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF  212 (224)
Q Consensus       179 L~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F  212 (224)
                      |+.+.+. +.++|-|++....++.+++.+.-..+|
T Consensus        55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~   89 (191)
T 3n1u_A           55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYY   89 (191)
T ss_dssp             HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccce
Confidence            7777754 999999999999999999987654433

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=94.20  E-value=0.069  Score=46.96  Aligned_cols=42  Identities=17%  Similarity=0.203  Sum_probs=31.1

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchh-hHHHHHHhhCCCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEG-YARPLVDKIDREN  210 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~-YA~~Vld~IDP~~  210 (224)
                      ...-||+.|||+.+.+. +.|+|-|+.... .-+...+.|.-.|
T Consensus       100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lG  143 (262)
T 3ocu_A          100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLG  143 (262)
T ss_dssp             CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHT
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcC
Confidence            55789999999999855 999999988765 4555555554444

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=93.85  E-value=0.011  Score=48.85  Aligned_cols=36  Identities=3%  Similarity=0.027  Sum_probs=30.1

Q ss_pred             eccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhh
Q 027383          171 ERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKI  206 (224)
Q Consensus       171 ~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~I  206 (224)
                      ..|+..++|+.+.+ -+.++|-|++.+..++.+++.|
T Consensus        89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l  125 (211)
T 2b82_A           89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTL  125 (211)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHH
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH
Confidence            46899999999975 5999999999888777777664

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=93.79  E-value=0.13  Score=41.16  Aligned_cols=39  Identities=18%  Similarity=0.110  Sum_probs=29.3

Q ss_pred             ccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCC
Q 027383          172 RPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDREN  210 (224)
Q Consensus       172 RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~  210 (224)
                      -|...+.|+++.+. +.++|.|.-.......+++.++..+
T Consensus        26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~g   65 (142)
T 2obb_A           26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARG   65 (142)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTT
T ss_pred             CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcC
Confidence            36788889988754 8888888887666667777776655

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=93.56  E-value=0.19  Score=44.15  Aligned_cols=39  Identities=15%  Similarity=0.192  Sum_probs=29.0

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchh-hHHHHHHhhC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEG-YARPLVDKID  207 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~-YA~~Vld~ID  207 (224)
                      ...-||+.|||+.+.+. +.|+|-|+.... .-+...+.|.
T Consensus       100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~  140 (260)
T 3pct_A          100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMK  140 (260)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHH
Confidence            56789999999999854 999999988765 4444444443

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=93.33  E-value=0.17  Score=40.28  Aligned_cols=36  Identities=6%  Similarity=0.039  Sum_probs=29.1

Q ss_pred             HHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc
Q 027383          177 EFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF  212 (224)
Q Consensus       177 EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F  212 (224)
                      .+|+.+.+. +.++|-|++....++.+++.+.-..+|
T Consensus        60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~   96 (188)
T 2r8e_A           60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLY   96 (188)
T ss_dssp             HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceee
Confidence            378888765 999999999999999999987644333

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=92.84  E-value=0.28  Score=38.45  Aligned_cols=52  Identities=19%  Similarity=0.254  Sum_probs=44.6

Q ss_pred             EEeccCHHHHHHHhhhC--ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF--ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~--fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      +...|++.++|+.+.+.  +.+.|.|++...+++.+++.+.-..+|+...+.+.
T Consensus        92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~  145 (234)
T 2hcf_A           92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADD  145 (234)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTT
T ss_pred             CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCC
Confidence            56789999999999986  99999999999999999999877777776655444

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=92.11  E-value=0.22  Score=37.94  Aligned_cols=52  Identities=10%  Similarity=0.143  Sum_probs=44.7

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      +..+|++.++|+++.+. +.++|.|++...+++.+++.+.-.++|+..+..+.
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~  140 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEE  140 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGG
T ss_pred             CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeeccc
Confidence            35789999999999876 99999999999999999999876667877766554

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=91.76  E-value=0.19  Score=40.06  Aligned_cols=53  Identities=15%  Similarity=0.080  Sum_probs=46.4

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ...+|++.++|+.+.+. +.++|.|++...+++.+++.+.-.++|+..+..+.+
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  162 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLD  162 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTT
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEecccc
Confidence            46899999999999976 999999999999999999998777778887776654

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=91.68  E-value=0.34  Score=39.38  Aligned_cols=53  Identities=23%  Similarity=0.182  Sum_probs=45.0

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +..+|++.++|+.+.+. +.++|.|++.+.+++.+++.+.-.++|+..+..+.+
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~  166 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSL  166 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTS
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccC
Confidence            46789999999999865 999999999999999999998766678777766654

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=91.63  E-value=0.31  Score=38.88  Aligned_cols=53  Identities=17%  Similarity=0.207  Sum_probs=45.2

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...|++.++|+.+.+. +.++|.|++.+.+++.+++.+.-..+|+..+..+.+
T Consensus        82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~  135 (222)
T 2nyv_A           82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTF  135 (222)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSS
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcC
Confidence            56789999999999875 999999999999999999998766678777765543

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=91.60  E-value=0.15  Score=39.79  Aligned_cols=53  Identities=11%  Similarity=0.077  Sum_probs=44.1

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...|++.++|+.+.+.+.++|.|++.+.+++.+++.+.-..+|+..+..+.+
T Consensus        82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  134 (209)
T 2hdo_A           82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDT  134 (209)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGS
T ss_pred             CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcC
Confidence            56789999999999866999999999999999999988655667776665543

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=91.36  E-value=0.33  Score=38.07  Aligned_cols=53  Identities=19%  Similarity=0.168  Sum_probs=45.3

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...|++.++|+.+.+. +.++|.|++...+++.+++.+.-..+|+..+..+.+
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  151 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAV  151 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGT
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEeccc
Confidence            56689999999999876 999999999999999999998777778777665543

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=91.25  E-value=0.29  Score=38.58  Aligned_cols=53  Identities=13%  Similarity=0.123  Sum_probs=44.6

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...|++.++|+.+.+. +.++|.|++...+++.+++.+.-..+|+..+..+.+
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  147 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPV  147 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGG
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEeccc
Confidence            45789999999999865 999999999999999999988766678777765543

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=91.22  E-value=0.39  Score=40.22  Aligned_cols=23  Identities=26%  Similarity=0.020  Sum_probs=14.5

Q ss_pred             CCCCCCCCeeEEEeCCCceeccc
Q 027383          104 GDGQEIEKLTVVLDLDETLVCAY  126 (224)
Q Consensus       104 ~~~~~~~KltLVLDLDETLVhs~  126 (224)
                      +.......+.+++||||||+.+.
T Consensus        14 ~~~~~~~~kli~~DlDGTLl~~~   36 (285)
T 3pgv_A           14 NLYFQGMYQVVASDLDGTLLSPD   36 (285)
T ss_dssp             -------CCEEEEECCCCCSCTT
T ss_pred             cccccCcceEEEEeCcCCCCCCC
Confidence            34556678899999999999864

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=90.83  E-value=0.14  Score=42.23  Aligned_cols=35  Identities=9%  Similarity=-0.041  Sum_probs=20.3

Q ss_pred             CHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCC
Q 027383          174 GLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDR  208 (224)
Q Consensus       174 gL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP  208 (224)
                      ...+.|+++.+ -..++|-|......+..+++.+..
T Consensus        26 ~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~   61 (227)
T 1l6r_A           26 KAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGI   61 (227)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCC
Confidence            34455555553 356666666666666666665543

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=90.81  E-value=0.38  Score=37.50  Aligned_cols=52  Identities=17%  Similarity=0.102  Sum_probs=44.3

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ....|++.++|+.+.+. +.++|.|++...+++.+++.+.-..+|+..+..+.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~  142 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDD  142 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGG
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeecccc
Confidence            56789999999999876 99999999999999999998876667777665544

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=90.76  E-value=0.46  Score=38.75  Aligned_cols=15  Identities=20%  Similarity=0.412  Sum_probs=12.9

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+.+.
T Consensus         4 kli~~DlDGTLl~~~   18 (231)
T 1wr8_A            4 KAISIDIDGTITYPN   18 (231)
T ss_dssp             CEEEEESTTTTBCTT
T ss_pred             eEEEEECCCCCCCCC
Confidence            478999999999864

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=90.46  E-value=0.33  Score=37.87  Aligned_cols=49  Identities=18%  Similarity=0.268  Sum_probs=42.0

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccc-eeee
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFS-LRLY  217 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~-~RLy  217 (224)
                      +..+|++.++|+.+.+.+.++|.|++.+.+++.+++.+.-..+|. ...+
T Consensus        68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~  117 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEI  117 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEE
T ss_pred             cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcceecceeEE
Confidence            456999999999999779999999999999999999987777774 3343

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=90.26  E-value=0.39  Score=38.17  Aligned_cols=53  Identities=21%  Similarity=0.235  Sum_probs=41.2

Q ss_pred             EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      .+...|++.++|+.+.+. +.++|.|++.+ +++.+++.+.-.++|+..+..+.+
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~  146 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEI  146 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEecccc
Confidence            467899999999999975 99999999977 689999988766678877766544

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=90.25  E-value=0.42  Score=43.08  Aligned_cols=54  Identities=22%  Similarity=0.300  Sum_probs=40.8

Q ss_pred             CCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh-CceE
Q 027383          110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE-FADL  188 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse-~fEI  188 (224)
                      +++.+++|+||||++...                                           .=|+..|+|+.+.+ -..+
T Consensus        12 ~~~~~l~D~DGvl~~g~~-------------------------------------------~~p~a~~~l~~l~~~g~~~   48 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFRGKK-------------------------------------------PIAGASDALKLLNRNKIPY   48 (352)
T ss_dssp             CCEEEEECCBTTTEETTE-------------------------------------------ECTTHHHHHHHHHHTTCCE
T ss_pred             cCCEEEEECCCeeEcCCe-------------------------------------------eCcCHHHHHHHHHHCCCEE
Confidence            688999999999997410                                           01778888888875 4788


Q ss_pred             EEEcCCc----hhhHHHHHHhh
Q 027383          189 VLFTAGL----EGYARPLVDKI  206 (224)
Q Consensus       189 vIFTAg~----k~YA~~Vld~I  206 (224)
                      ++.|++.    +.|++.+.+.+
T Consensus        49 ~~vTNn~~~~~~~~~~~l~~~l   70 (352)
T 3kc2_A           49 ILLTNGGGFSERARTEFISSKL   70 (352)
T ss_dssp             EEECSCCSSCHHHHHHHHHHHH
T ss_pred             EEEeCCCCCCchHHHHHHHHhc
Confidence            8889875    77888877543

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=90.16  E-value=0.46  Score=40.03  Aligned_cols=16  Identities=44%  Similarity=0.501  Sum_probs=13.8

Q ss_pred             CCeeEEEeCCCceecc
Q 027383          110 EKLTVVLDLDETLVCA  125 (224)
Q Consensus       110 ~KltLVLDLDETLVhs  125 (224)
                      +.+.+++||||||+..
T Consensus         8 ~~~li~~DlDGTLl~~   23 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDS   23 (275)
T ss_dssp             CCEEEEEECTTTTSCS
T ss_pred             CceEEEEeCCCCCCCC
Confidence            4678999999999975

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=90.16  E-value=0.11  Score=42.38  Aligned_cols=22  Identities=27%  Similarity=0.146  Sum_probs=15.7

Q ss_pred             CCCCCCCeeEEEeCCCceeccc
Q 027383          105 DGQEIEKLTVVLDLDETLVCAY  126 (224)
Q Consensus       105 ~~~~~~KltLVLDLDETLVhs~  126 (224)
                      +......+.+++||||||+.+.
T Consensus        17 ~~~~~~~k~iiFDlDGTL~d~~   38 (243)
T 2hsz_A           17 FQGMTQFKLIGFDLDGTLVNSL   38 (243)
T ss_dssp             --CCSSCSEEEECSBTTTEECH
T ss_pred             ecCCccCCEEEEcCCCcCCCCH
Confidence            3444455689999999999863

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=90.15  E-value=0.23  Score=41.27  Aligned_cols=53  Identities=15%  Similarity=0.199  Sum_probs=45.7

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...||+.++|+.+.+.+.++|.|++.+.+++.+++.++-..+|+..+..+.+
T Consensus       120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~  172 (260)
T 2gfh_A          120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQ  172 (260)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGS
T ss_pred             CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCC
Confidence            35679999999999988999999999999999999999877788887765543

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=90.13  E-value=0.36  Score=37.69  Aligned_cols=53  Identities=13%  Similarity=0.125  Sum_probs=44.7

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ....|++.++|+.+.+. +.++|.|++...+++.+++.+.-..+|+..+..+.+
T Consensus        95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  148 (230)
T 3um9_A           95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEV  148 (230)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGT
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhc
Confidence            45689999999999876 999999999999999999988766677777665543

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=90.07  E-value=0.27  Score=39.33  Aligned_cols=52  Identities=19%  Similarity=0.278  Sum_probs=44.0

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      +...|++.++|+.+.+. +.++|.|++...+++.+++.+.-..+|+..+..+.
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~  145 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDF  145 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGG
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCC
Confidence            34689999999999865 99999999999999999999876667877776554

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=89.94  E-value=0.15  Score=39.28  Aligned_cols=46  Identities=15%  Similarity=0.244  Sum_probs=37.3

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccce
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSL  214 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~  214 (224)
                      ....|++.++|+.+.+. +.++|+|++...+++.+++.+.-..+|..
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~  121 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN  121 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEe
Confidence            34579999999999865 89999999999999999888765544443

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=89.90  E-value=0.22  Score=38.81  Aligned_cols=48  Identities=23%  Similarity=0.240  Sum_probs=42.6

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRL  216 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL  216 (224)
                      +..+|++.++|+.+.+. +.++|.|++...+++.+++.+.-..+|+..+
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~  122 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTL  122 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcccee
Confidence            45899999999999977 9999999999999999999987766777665

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=89.87  E-value=0.57  Score=38.76  Aligned_cols=14  Identities=21%  Similarity=0.553  Sum_probs=12.1

Q ss_pred             eeEEEeCCCceecc
Q 027383          112 LTVVLDLDETLVCA  125 (224)
Q Consensus       112 ltLVLDLDETLVhs  125 (224)
                      +.+++||||||++.
T Consensus         2 k~i~~D~DGtL~~~   15 (263)
T 1zjj_A            2 VAIIFDMDGVLYRG   15 (263)
T ss_dssp             EEEEEECBTTTEET
T ss_pred             eEEEEeCcCceEeC
Confidence            46899999999975

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=89.79  E-value=0.61  Score=38.42  Aligned_cols=16  Identities=44%  Similarity=0.445  Sum_probs=13.8

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         5 ~kli~fDlDGTLl~~~   20 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSK   20 (279)
T ss_dssp             CCEEEECCCCCCSCTT
T ss_pred             ceEEEEeCCCCCCCCC
Confidence            5689999999999864

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=89.70  E-value=0.41  Score=37.44  Aligned_cols=52  Identities=13%  Similarity=0.090  Sum_probs=44.3

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ....|++.++|+.+.+.+.++|.|++.+.+++.+++.+.-..+|+..++.+.
T Consensus       102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~  153 (238)
T 3ed5_A          102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSED  153 (238)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGG
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecc
Confidence            4578999999999987799999999999999999999876667877766544

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=89.50  E-value=0.51  Score=38.89  Aligned_cols=16  Identities=25%  Similarity=0.341  Sum_probs=6.8

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         5 ~kli~~DlDGTLl~~~   20 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEK   20 (279)
T ss_dssp             CCEEEECC--------
T ss_pred             eEEEEEcCcCCCCCCC
Confidence            4679999999999864

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=89.32  E-value=0.53  Score=37.49  Aligned_cols=52  Identities=13%  Similarity=0.153  Sum_probs=43.5

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      +..+|++.++|+.+.+. +.++|.|++...+++.+++.+.-..+|+..+..+.
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~  156 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADD  156 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGG
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccc
Confidence            34679999999999865 99999999999999999998876667777766543

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=89.29  E-value=0.46  Score=37.23  Aligned_cols=53  Identities=23%  Similarity=0.314  Sum_probs=46.1

Q ss_pred             EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ....||+.++|+.+. ..+.+.|.|++.+.++..+++.+.-.++|+..++.+.+
T Consensus        83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~  136 (216)
T 3kbb_A           83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQV  136 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGS
T ss_pred             cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcccccccccccc
Confidence            457899999999996 46999999999999999999999888889888776544

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=89.18  E-value=0.45  Score=37.15  Aligned_cols=53  Identities=15%  Similarity=0.155  Sum_probs=45.0

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ....|++.++|+.+.+.+.++|.|++.+.+++.+++.+.-..+|+..++.+.+
T Consensus       106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~  158 (240)
T 3qnm_A          106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDL  158 (240)
T ss_dssp             CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGT
T ss_pred             CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccC
Confidence            45689999999999988999999999999999999988766677777665543

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=89.06  E-value=0.61  Score=38.14  Aligned_cols=16  Identities=31%  Similarity=0.424  Sum_probs=13.5

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         3 ~kli~~DlDGTLl~~~   18 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQ   18 (258)
T ss_dssp             CCEEEECTBTTTBCTT
T ss_pred             ceEEEEeCCCCCcCCC
Confidence            3578999999999864

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=89.06  E-value=0.31  Score=38.07  Aligned_cols=53  Identities=13%  Similarity=0.202  Sum_probs=45.0

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...|++.++|+.+.+. +.++|.|++.+.+++.+++.+.-..+|+..+..+..
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  138 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLD  138 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTT
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCC
Confidence            45789999999999876 999999999999999999998766678777665543

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=88.96  E-value=0.39  Score=38.05  Aligned_cols=46  Identities=11%  Similarity=-0.030  Sum_probs=38.8

Q ss_pred             EeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCcccee
Q 027383          170 FERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLR  215 (224)
Q Consensus       170 ~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~R  215 (224)
                      ..+||+.++|+.+.+ -+.++|-|++...+++++++.+.-.++|...
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~  138 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATD  138 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECE
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcc
Confidence            359999999999986 4999999999999999999998765545443

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=88.96  E-value=0.7  Score=38.29  Aligned_cols=17  Identities=24%  Similarity=0.378  Sum_probs=14.0

Q ss_pred             CCeeEEEeCCCceeccc
Q 027383          110 EKLTVVLDLDETLVCAY  126 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~  126 (224)
                      ..+.+++||||||+.+.
T Consensus         5 ~~kli~fDlDGTLl~~~   21 (290)
T 3dnp_A            5 SKQLLALNIDGALLRSN   21 (290)
T ss_dssp             -CCEEEECCCCCCSCTT
T ss_pred             cceEEEEcCCCCCCCCC
Confidence            35689999999999875

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=88.95  E-value=0.53  Score=39.57  Aligned_cols=15  Identities=33%  Similarity=0.461  Sum_probs=13.0

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+.+.
T Consensus         5 kli~~DlDGTLl~~~   19 (288)
T 1nrw_A            5 KLIAIDLDGTLLNSK   19 (288)
T ss_dssp             CEEEEECCCCCSCTT
T ss_pred             EEEEEeCCCCCCCCC
Confidence            578999999999864

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=88.86  E-value=0.51  Score=38.95  Aligned_cols=16  Identities=25%  Similarity=0.223  Sum_probs=13.8

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         5 ~kli~~DlDGTLl~~~   20 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGK   20 (264)
T ss_dssp             CCEEEECCBTTTEETT
T ss_pred             CCEEEEeCCCceEeCC
Confidence            5689999999999864

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=88.69  E-value=0.88  Score=34.96  Aligned_cols=52  Identities=15%  Similarity=0.021  Sum_probs=43.6

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ....|++.++|+.+.+. +.++|.|++...+++.+++.++-...|+..++.+.
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~  145 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEK  145 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTT
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccc
Confidence            45689999999999875 99999999999999999998876667777776554

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=88.60  E-value=0.42  Score=37.77  Aligned_cols=51  Identities=14%  Similarity=0.135  Sum_probs=43.5

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      +...||+.++|+.+.+.+.+.|.|++.+.+++.+++.++-..+|+..+..+
T Consensus        83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~  133 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS  133 (210)
T ss_dssp             CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC
T ss_pred             CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC
Confidence            456799999999998888999999999999999999887666787766544

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=88.22  E-value=0.38  Score=37.34  Aligned_cols=52  Identities=13%  Similarity=0.125  Sum_probs=43.1

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...|++.+ |+.+.+.+.++|.|++.+.+++.+++.+.-..+|+..+..+.+
T Consensus        73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  124 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESV  124 (201)
T ss_dssp             CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGG
T ss_pred             cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhc
Confidence            456899999 9999755999999999999999999998766678777665543

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=88.03  E-value=0.92  Score=36.38  Aligned_cols=16  Identities=31%  Similarity=0.295  Sum_probs=12.6

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      -+.+++||||||+.+.
T Consensus         7 ik~i~fDlDGTLld~~   22 (259)
T 2ho4_A            7 LKAVLVDLNGTLHIED   22 (259)
T ss_dssp             CCEEEEESSSSSCC--
T ss_pred             CCEEEEeCcCcEEeCC
Confidence            4679999999999864

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=87.71  E-value=0.72  Score=37.09  Aligned_cols=52  Identities=19%  Similarity=0.240  Sum_probs=44.0

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...||+.++|+.+.+. +.+.|.|++.+.+++.+++.+.-. .|+..+..+.+
T Consensus       109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~  161 (240)
T 2hi0_A          109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSG  161 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTT
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCC
Confidence            45679999999999864 999999999999999999998766 78877776654

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=87.55  E-value=0.61  Score=37.75  Aligned_cols=52  Identities=15%  Similarity=0.185  Sum_probs=44.4

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...|++.++|+.+. .+.++|-|++.+.+++.+++.+.-..+|+..+..+.+
T Consensus        92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~  143 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAK  143 (253)
T ss_dssp             CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGG
T ss_pred             CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEcccc
Confidence            456899999999999 9999999999999999999998766678877765543

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=87.43  E-value=0.45  Score=37.62  Aligned_cols=48  Identities=25%  Similarity=0.502  Sum_probs=40.9

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCC--Cccceee
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRE--NLFSLRL  216 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~--~~F~~RL  216 (224)
                      +..+||+.++|+.+.+. +.++|.|++...+++.+++.+.-.  ++|+..+
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~  135 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRL  135 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECE
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeE
Confidence            46789999999999865 999999999999999999988654  3676654

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=87.43  E-value=0.64  Score=39.14  Aligned_cols=16  Identities=25%  Similarity=0.339  Sum_probs=13.4

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+...
T Consensus         5 ~kli~~DlDGTLl~~~   20 (282)
T 1rkq_A            5 IKLIAIDMDGTLLLPD   20 (282)
T ss_dssp             CCEEEECCCCCCSCTT
T ss_pred             ceEEEEeCCCCCCCCC
Confidence            3578999999999763

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=87.40  E-value=0.71  Score=37.78  Aligned_cols=16  Identities=19%  Similarity=0.270  Sum_probs=13.6

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||++..
T Consensus         8 ~kli~~DlDGTLl~~~   23 (268)
T 3qgm_A            8 KKGYIIDIDGVIGKSV   23 (268)
T ss_dssp             CSEEEEECBTTTEETT
T ss_pred             CCEEEEcCcCcEECCC
Confidence            5689999999999764

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=87.31  E-value=1.4  Score=37.25  Aligned_cols=45  Identities=7%  Similarity=0.065  Sum_probs=38.5

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFS  213 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~  213 (224)
                      ...+||+.++|+.+.+. +.++|-|++.+.+++.+++.+.-..+|.
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~  207 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA  207 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeee
Confidence            45799999999999865 9999999999999999999886554443

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=87.11  E-value=0.42  Score=37.41  Aligned_cols=51  Identities=20%  Similarity=0.119  Sum_probs=42.8

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      ....|++.++|+.+.+.+.++|.|++...+++.+++.+.-..+|+..+..+
T Consensus        99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~  149 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKDLFDSITTSE  149 (234)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHH
T ss_pred             CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHHHcceeEecc
Confidence            456799999999998779999999999999999999887666677665543

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=87.01  E-value=0.2  Score=39.85  Aligned_cols=38  Identities=21%  Similarity=0.259  Sum_probs=32.5

Q ss_pred             EEeccCHHHHHHHhhh--CceEEEEcCCchhhHHHHHHhh
Q 027383          169 VFERPGLHEFLKKLAE--FADLVLFTAGLEGYARPLVDKI  206 (224)
Q Consensus       169 V~~RPgL~EFL~~lse--~fEIvIFTAg~k~YA~~Vld~I  206 (224)
                      +...||+.++|+++.+  .+.+.|-|++.+.+++.+++.+
T Consensus        74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~  113 (197)
T 1q92_A           74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKY  113 (197)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHh
Confidence            4578999999999997  5999999999998887776654

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=86.85  E-value=0.63  Score=38.82  Aligned_cols=18  Identities=33%  Similarity=0.425  Sum_probs=14.1

Q ss_pred             CCCeeEEEeCCCceeccc
Q 027383          109 IEKLTVVLDLDETLVCAY  126 (224)
Q Consensus       109 ~~KltLVLDLDETLVhs~  126 (224)
                      .+.+.+++||||||+...
T Consensus        11 ~~~kli~~DlDGTLl~~~   28 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPAR   28 (262)
T ss_dssp             --CEEEEEESBTTTBSTT
T ss_pred             cCeEEEEEeCccCCCCCC
Confidence            356889999999999764

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=86.83  E-value=1  Score=33.90  Aligned_cols=50  Identities=20%  Similarity=0.209  Sum_probs=41.4

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      ...+|++.++|+.+.+. +.++|+|++...+++ +++.+.-..+|+..+..+
T Consensus        84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~  134 (207)
T 2go7_A           84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQ  134 (207)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGG
T ss_pred             ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecC
Confidence            45789999999999876 999999999999999 988886656676665543

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=86.74  E-value=1.3  Score=36.80  Aligned_cols=15  Identities=40%  Similarity=0.461  Sum_probs=12.8

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+.+.
T Consensus         3 kli~~DlDGTLl~~~   17 (268)
T 1nf2_A            3 RVFVFDLDGTLLNDN   17 (268)
T ss_dssp             CEEEEECCCCCSCTT
T ss_pred             cEEEEeCCCcCCCCC
Confidence            478999999999764

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=86.66  E-value=0.24  Score=39.63  Aligned_cols=52  Identities=15%  Similarity=0.128  Sum_probs=42.3

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc--ceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF--SLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F--~~RLyRdsC  221 (224)
                      ....|++.++|+.+.+. +.++|.|++...++..+++. .-.++|  +..+..+.+
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~  162 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDV  162 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTC
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhC
Confidence            45789999999999876 99999999999999988887 555677  666665543

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=86.40  E-value=1.3  Score=35.41  Aligned_cols=25  Identities=8%  Similarity=0.096  Sum_probs=17.6

Q ss_pred             HHHHhhh-CceEEEEcCCchhhHHHHHH
Q 027383          178 FLKKLAE-FADLVLFTAGLEGYARPLVD  204 (224)
Q Consensus       178 FL~~lse-~fEIvIFTAg~k~YA~~Vld  204 (224)
                      .|+.+.+ -+.+.|-|+.  ..++.+++
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~   69 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLS   69 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHH
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHH
Confidence            4666654 4778888877  67777777

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=85.90  E-value=0.4  Score=37.20  Aligned_cols=52  Identities=8%  Similarity=-0.053  Sum_probs=41.8

Q ss_pred             EEEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHh------hCCCCccceeeecC
Q 027383          168 TVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDK------IDRENLFSLRLYRP  219 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~------IDP~~~F~~RLyRd  219 (224)
                      .+...|++.++|+.+.+-+.++|.|++...+++.+++.      +.-..+|+..+..+
T Consensus        87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~  144 (211)
T 2i6x_A           87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASC  144 (211)
T ss_dssp             EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHH
T ss_pred             hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeec
Confidence            45678999999999988899999999999999998887      34334576665543

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=85.88  E-value=0.24  Score=38.56  Aligned_cols=27  Identities=30%  Similarity=0.374  Sum_probs=23.8

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGL  195 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~  195 (224)
                      +...||+.|+|+.+.+.+.+.|-|++.
T Consensus        68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~   94 (180)
T 3bwv_A           68 LDVMPHAQEVVKQLNEHYDIYIATAAM   94 (180)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEECC-
T ss_pred             CCCCcCHHHHHHHHHhcCCEEEEeCCC
Confidence            457899999999999889999999983

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=85.68  E-value=0.28  Score=37.31  Aligned_cols=42  Identities=24%  Similarity=0.380  Sum_probs=35.4

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENL  211 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~  211 (224)
                      +..+|++.++|+.+.+. +.++|.|++...+++.+ +.+.-..+
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~  120 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM  120 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh
Confidence            36799999999999976 99999999999999888 77654433

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=85.64  E-value=0.29  Score=38.96  Aligned_cols=46  Identities=11%  Similarity=0.035  Sum_probs=38.5

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL  216 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL  216 (224)
                      ....|++.++|+.+.+.+.++|.|++...+++.+++.+.-.  |+..+
T Consensus       119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~  164 (254)
T 3umc_A          119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDMLL  164 (254)
T ss_dssp             CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CSEEC
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cceEE
Confidence            35679999999999988999999999999999999987543  55443

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=85.62  E-value=0.28  Score=37.86  Aligned_cols=51  Identities=8%  Similarity=0.020  Sum_probs=41.7

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      +...|++.++|+.+.+ .+.++|.|++...+++.+++.++-...|+..+..+
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (225)
T 3d6j_A           88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGE  139 (225)
T ss_dssp             CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGG
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehh
Confidence            4568999999999985 58999999999999999999886656676665543

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=84.99  E-value=1.3  Score=36.25  Aligned_cols=17  Identities=24%  Similarity=0.245  Sum_probs=14.3

Q ss_pred             CCeeEEEeCCCceeccc
Q 027383          110 EKLTVVLDLDETLVCAY  126 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~  126 (224)
                      +.+.+++||||||+.+.
T Consensus        16 ~~~~v~~DlDGTLl~~~   32 (271)
T 1vjr_A           16 KIELFILDMDGTFYLDD   32 (271)
T ss_dssp             GCCEEEECCBTTTEETT
T ss_pred             CCCEEEEcCcCcEEeCC
Confidence            45689999999999864

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=84.58  E-value=0.33  Score=36.99  Aligned_cols=16  Identities=19%  Similarity=0.304  Sum_probs=13.6

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++|+||||+.+.
T Consensus         5 ~k~i~fDlDGTL~~~~   20 (214)
T 3e58_A            5 VEAIIFDMDGVLFDTE   20 (214)
T ss_dssp             CCEEEEESBTTTBCCH
T ss_pred             ccEEEEcCCCCccccH
Confidence            5689999999999853

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=84.54  E-value=1.3  Score=36.84  Aligned_cols=15  Identities=13%  Similarity=-0.035  Sum_probs=13.0

Q ss_pred             CeeEEEeCCCceecc
Q 027383          111 KLTVVLDLDETLVCA  125 (224)
Q Consensus       111 KltLVLDLDETLVhs  125 (224)
                      .+.+++||||||+..
T Consensus        14 ~k~i~~D~DGtL~~~   28 (284)
T 2hx1_A           14 YKCIFFDAFGVLKTY   28 (284)
T ss_dssp             CSEEEECSBTTTEET
T ss_pred             CCEEEEcCcCCcCcC
Confidence            567999999999975

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=84.46  E-value=0.33  Score=38.05  Aligned_cols=15  Identities=27%  Similarity=0.388  Sum_probs=13.3

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+++.
T Consensus         4 k~i~fDlDGTLl~~~   18 (250)
T 2c4n_A            4 KNVICDIDGVLMHDN   18 (250)
T ss_dssp             CEEEEECBTTTEETT
T ss_pred             cEEEEcCcceEEeCC
Confidence            579999999999874

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=84.36  E-value=0.3  Score=37.16  Aligned_cols=49  Identities=12%  Similarity=0.158  Sum_probs=39.6

Q ss_pred             eccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          171 ERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       171 ~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ..|++.++|+.+.+. +.++|.|++. .+++.+++.+.-...|+..+..+.
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~~f~~~~~~~~  132 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAAYFTEVVTSSS  132 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGGGEEEEECGGG
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHhheeeeeeccc
Confidence            689999999999875 9999999876 588899888766666776665543

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=84.28  E-value=1.5  Score=33.21  Aligned_cols=16  Identities=31%  Similarity=0.374  Sum_probs=13.4

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         6 ~k~i~fDlDGTL~d~~   21 (190)
T 2fi1_A            6 YHDYIWDLGGTLLDNY   21 (190)
T ss_dssp             CSEEEECTBTTTBCHH
T ss_pred             ccEEEEeCCCCcCCCH
Confidence            4678999999999863

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=84.28  E-value=0.32  Score=38.04  Aligned_cols=16  Identities=31%  Similarity=0.451  Sum_probs=13.8

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         4 ~k~iifDlDGTL~d~~   19 (234)
T 2hcf_A            4 RTLVLFDIDGTLLKVE   19 (234)
T ss_dssp             CEEEEECCBTTTEEEC
T ss_pred             ceEEEEcCCCCcccCc
Confidence            4679999999999874

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=84.24  E-value=0.32  Score=36.71  Aligned_cols=16  Identities=44%  Similarity=0.659  Sum_probs=13.4

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++|+||||+.+.
T Consensus         4 ~k~i~fDlDGTL~~~~   19 (207)
T 2go7_A            4 KTAFIWDLDGTLLDSY   19 (207)
T ss_dssp             CCEEEECTBTTTEECH
T ss_pred             ccEEEEeCCCcccccH
Confidence            3578999999999763

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=84.11  E-value=1.7  Score=33.59  Aligned_cols=48  Identities=15%  Similarity=0.229  Sum_probs=40.5

Q ss_pred             eccCHHHHHHHhhhC-ceEEEEcCCc---hhhHHHHHHhhCCCCccceeeec
Q 027383          171 ERPGLHEFLKKLAEF-ADLVLFTAGL---EGYARPLVDKIDRENLFSLRLYR  218 (224)
Q Consensus       171 ~RPgL~EFL~~lse~-fEIvIFTAg~---k~YA~~Vld~IDP~~~F~~RLyR  218 (224)
                      ..|++.++|+.+.+. +.++|.|++.   ..+++.+++.++-..+|+..++.
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~  151 (235)
T 2om6_A          100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFA  151 (235)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEH
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheec
Confidence            489999999999876 9999999999   99999999988766667766553

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=83.97  E-value=0.35  Score=38.82  Aligned_cols=45  Identities=13%  Similarity=0.104  Sum_probs=37.4

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFS  213 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~  213 (224)
                      +...||+.++|+.+.+...+.|.|++.+.+++.+++.+.-.++|.
T Consensus        95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~  139 (231)
T 2p11_A           95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVE  139 (231)
T ss_dssp             GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTT
T ss_pred             CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcC
Confidence            456899999999999766899999999999999999875433443

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=83.97  E-value=1.3  Score=34.00  Aligned_cols=49  Identities=24%  Similarity=0.154  Sum_probs=41.4

Q ss_pred             EEeccCHHHHHHHhhh--CceEEEEcCCchhhHHHHHHhhCCCCccceeee
Q 027383          169 VFERPGLHEFLKKLAE--FADLVLFTAGLEGYARPLVDKIDRENLFSLRLY  217 (224)
Q Consensus       169 V~~RPgL~EFL~~lse--~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLy  217 (224)
                      +...|++.++|+.+.+  .+.++|.|++...+++.+++.+.-.++|+..+.
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~  154 (234)
T 3ddh_A          104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEV  154 (234)
T ss_dssp             CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEE
T ss_pred             CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeee
Confidence            4578999999999987  699999999999999999998876666666543

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=83.91  E-value=1.3  Score=36.48  Aligned_cols=12  Identities=42%  Similarity=0.742  Sum_probs=11.0

Q ss_pred             eeEEEeCCCcee
Q 027383          112 LTVVLDLDETLV  123 (224)
Q Consensus       112 ltLVLDLDETLV  123 (224)
                      +.+++||||||+
T Consensus         3 kli~~DlDGTLl   14 (249)
T 2zos_A            3 RLIFLDIDKTLI   14 (249)
T ss_dssp             EEEEECCSTTTC
T ss_pred             cEEEEeCCCCcc
Confidence            578999999999

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=83.77  E-value=0.46  Score=39.70  Aligned_cols=24  Identities=21%  Similarity=0.098  Sum_probs=17.3

Q ss_pred             eccCHHHHHHHhhhCc--eEEEEcCC
Q 027383          171 ERPGLHEFLKKLAEFA--DLVLFTAG  194 (224)
Q Consensus       171 ~RPgL~EFL~~lse~f--EIvIFTAg  194 (224)
                      .+|++.+.|+.+.+.|  .+.+.|..
T Consensus       123 ~~~~v~e~l~~l~~~~g~~l~~~t~~  148 (289)
T 3gyg_A          123 SKEKVEKLVKQLHENHNILLNPQTQL  148 (289)
T ss_dssp             CHHHHHHHHHHHHHHSSCCCEEGGGT
T ss_pred             CHHHHHHHHHHHHhhhCceeeecccc
Confidence            4678999999997654  44577765

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=83.63  E-value=0.37  Score=37.16  Aligned_cols=38  Identities=16%  Similarity=0.103  Sum_probs=31.7

Q ss_pred             EEEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHh
Q 027383          168 TVFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDK  205 (224)
Q Consensus       168 ~V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~  205 (224)
                      .+...|++.++|+++. +-+.++|.|++...+++.+++.
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~  127 (206)
T 2b0c_A           89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEE  127 (206)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGG
T ss_pred             hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHh
Confidence            3678999999999998 5699999999998887665544

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=83.62  E-value=1.7  Score=33.30  Aligned_cols=16  Identities=25%  Similarity=0.222  Sum_probs=13.7

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++|+||||+.+.
T Consensus         6 ~k~v~fDlDGTL~d~~   21 (225)
T 3d6j_A            6 YTVYLFDFDYTLADSS   21 (225)
T ss_dssp             CSEEEECCBTTTEECH
T ss_pred             CCEEEEeCCCCCCCCH
Confidence            4689999999999863

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=83.32  E-value=0.32  Score=37.59  Aligned_cols=49  Identities=18%  Similarity=0.234  Sum_probs=38.8

Q ss_pred             EeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          170 FERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       170 ~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ...|++.++|+.+.+. +.+.|.|++  ..++.+++.++-..+|+..+..+.
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~  140 (221)
T 2wf7_A           91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAE  140 (221)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTT
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEecccc
Confidence            4679999999999865 999999998  678888888765556776665544

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=83.31  E-value=1.2  Score=35.65  Aligned_cols=52  Identities=15%  Similarity=0.088  Sum_probs=42.5

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCc-cceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENL-FSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~-F~~RLyRds  220 (224)
                      +...|++.++|+.+.+. +.++|.|++...+++.+++.+.-.++ |+..+..+.
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~  163 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATD  163 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGG
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHh
Confidence            46789999999999866 99999999999999999998765555 666655443

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=83.31  E-value=0.44  Score=36.50  Aligned_cols=44  Identities=23%  Similarity=0.523  Sum_probs=37.6

Q ss_pred             eccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCC--Cccce
Q 027383          171 ERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRE--NLFSL  214 (224)
Q Consensus       171 ~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~--~~F~~  214 (224)
                      .+|++.++|+.+.+. +.++|.|++...+++.+++.+.-.  ++|..
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~  129 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAV  129 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEe
Confidence            689999999999875 999999999999999999988653  35543

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=83.21  E-value=1.7  Score=35.44  Aligned_cols=16  Identities=25%  Similarity=0.260  Sum_probs=13.6

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         5 ~k~v~fDlDGTL~~~~   20 (264)
T 1yv9_A            5 YQGYLIDLDGTIYLGK   20 (264)
T ss_dssp             CCEEEECCBTTTEETT
T ss_pred             CCEEEEeCCCeEEeCC
Confidence            4679999999999864

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=83.19  E-value=0.85  Score=36.70  Aligned_cols=51  Identities=14%  Similarity=-0.009  Sum_probs=42.7

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccce-eeecC
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSL-RLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~-RLyRd  219 (224)
                      ....|++.++|+.+.+ .+.++|.|++...+++.+++.+.-.++|+. .+..+
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~  161 (259)
T 4eek_A          109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPS  161 (259)
T ss_dssp             CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGG
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHh
Confidence            5679999999999986 699999999999999999998876666766 55443

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=83.18  E-value=0.39  Score=39.21  Aligned_cols=16  Identities=31%  Similarity=0.314  Sum_probs=13.8

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         5 ~kli~fDlDGTLl~~~   20 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEV   20 (274)
T ss_dssp             CCEEEECSBTTTBBTT
T ss_pred             ceEEEEECCCCCCCCC
Confidence            4678999999999875

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=83.11  E-value=0.37  Score=37.22  Aligned_cols=16  Identities=25%  Similarity=0.270  Sum_probs=13.7

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         8 ik~i~fDlDGTL~~~~   23 (234)
T 3ddh_A            8 IKVIAFDADDTLWSNE   23 (234)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             ccEEEEeCCCCCccCc
Confidence            3689999999999864

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=83.10  E-value=0.41  Score=37.83  Aligned_cols=16  Identities=38%  Similarity=0.436  Sum_probs=13.6

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         4 ~k~viFDlDGTL~d~~   19 (210)
T 2ah5_A            4 ITAIFFDLDGTLVDSS   19 (210)
T ss_dssp             CCEEEECSBTTTEECH
T ss_pred             CCEEEEcCCCcCccCH
Confidence            4579999999999864

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=83.06  E-value=0.37  Score=37.56  Aligned_cols=48  Identities=13%  Similarity=0.070  Sum_probs=39.0

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCcc-ceeeec
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLF-SLRLYR  218 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F-~~RLyR  218 (224)
                      +...|++.++|+.+..  .++|.|++.+.+++.+++.+.-.+.| +..++.
T Consensus        86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~  134 (229)
T 2fdr_A           86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSA  134 (229)
T ss_dssp             CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEH
T ss_pred             CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChHHhccceEEec
Confidence            4568999999999876  89999999999999999988655567 555443

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=83.06  E-value=0.38  Score=37.55  Aligned_cols=16  Identities=38%  Similarity=0.314  Sum_probs=13.5

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         4 ~k~i~fDlDGTL~d~~   19 (226)
T 3mc1_A            4 YNYVLFDLDGTLTDSA   19 (226)
T ss_dssp             CCEEEECSBTTTBCCH
T ss_pred             CCEEEEeCCCccccCH
Confidence            4689999999999763

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=83.02  E-value=0.38  Score=37.36  Aligned_cols=15  Identities=13%  Similarity=0.222  Sum_probs=12.8

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+.+.
T Consensus         2 k~iiFDlDGTL~d~~   16 (201)
T 2w43_A            2 IILAFDIFGTVLDTS   16 (201)
T ss_dssp             CEEEECCBTTTEEGG
T ss_pred             cEEEEeCCCceecch
Confidence            368999999999874

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=83.00  E-value=0.66  Score=38.34  Aligned_cols=14  Identities=43%  Similarity=0.541  Sum_probs=12.4

Q ss_pred             eeEEEeCCCceecc
Q 027383          112 LTVVLDLDETLVCA  125 (224)
Q Consensus       112 ltLVLDLDETLVhs  125 (224)
                      ..+++||||||+..
T Consensus         4 ~li~~DlDGTLl~~   17 (244)
T 1s2o_A            4 LLLISDLDNTWVGD   17 (244)
T ss_dssp             EEEEECTBTTTBSC
T ss_pred             eEEEEeCCCCCcCC
Confidence            48999999999975

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=83.00  E-value=0.38  Score=37.39  Aligned_cols=16  Identities=25%  Similarity=0.372  Sum_probs=13.4

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         4 ~k~iifDlDGTL~d~~   19 (209)
T 2hdo_A            4 YQALMFDIDGTLTNSQ   19 (209)
T ss_dssp             CSEEEECSBTTTEECH
T ss_pred             ccEEEEcCCCCCcCCH
Confidence            3579999999999863

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=82.97  E-value=0.38  Score=37.07  Aligned_cols=16  Identities=25%  Similarity=0.420  Sum_probs=13.5

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         9 ~k~i~fDlDGTL~~~~   24 (226)
T 1te2_A            9 ILAAIFDMDGLLIDSE   24 (226)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             CCEEEECCCCCcCcCH
Confidence            4689999999999763

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=82.96  E-value=0.49  Score=38.82  Aligned_cols=17  Identities=24%  Similarity=0.311  Sum_probs=14.5

Q ss_pred             CCeeEEEeCCCceeccc
Q 027383          110 EKLTVVLDLDETLVCAY  126 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~  126 (224)
                      +++.+++||||||+...
T Consensus         5 ~~kli~~DlDGTLl~~~   21 (246)
T 2amy_A            5 GPALCLFDVDGTLTAPR   21 (246)
T ss_dssp             CSEEEEEESBTTTBCTT
T ss_pred             CceEEEEECCCCcCCCC
Confidence            57889999999999753

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=82.89  E-value=0.46  Score=37.64  Aligned_cols=16  Identities=31%  Similarity=0.378  Sum_probs=13.7

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++|+||||+.+.
T Consensus         4 ~k~viFDlDGTL~d~~   19 (232)
T 3fvv_A            4 RRLALFDLDHTLLPLD   19 (232)
T ss_dssp             CEEEEECCBTTTBSSC
T ss_pred             CcEEEEeCCCCCcCCc
Confidence            4689999999999864

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=82.81  E-value=0.42  Score=37.42  Aligned_cols=15  Identities=27%  Similarity=0.401  Sum_probs=12.5

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++|+||||+.+.
T Consensus         2 kAViFD~DGTL~ds~   16 (216)
T 3kbb_A            2 EAVIFDMDGVLMDTE   16 (216)
T ss_dssp             CEEEEESBTTTBCCG
T ss_pred             eEEEECCCCcccCCH
Confidence            468999999999763

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=82.65  E-value=0.39  Score=38.65  Aligned_cols=49  Identities=20%  Similarity=0.113  Sum_probs=41.0

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeee
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLY  217 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLy  217 (224)
                      +...|++.++|+.+.+.+.+.|.|++...+++.+++.+.-..+|+..+.
T Consensus       111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~  159 (251)
T 2pke_A          111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEV  159 (251)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEE
T ss_pred             CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeee
Confidence            4568999999999997799999999999999999998766556665543

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=82.58  E-value=0.51  Score=37.20  Aligned_cols=51  Identities=16%  Similarity=0.130  Sum_probs=38.6

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc--ceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF--SLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F--~~RLyRds  220 (224)
                      ....|++.++|+.+.+. +.++|.|++...+++.+++. .-..+|  +..+..+.
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~  160 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFD  160 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGG
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEeccc
Confidence            45689999999999876 99999999999999999887 545567  66665543

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=82.57  E-value=0.45  Score=36.71  Aligned_cols=49  Identities=6%  Similarity=0.030  Sum_probs=40.5

Q ss_pred             EeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeec
Q 027383          170 FERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYR  218 (224)
Q Consensus       170 ~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyR  218 (224)
                      ...|++.++|+.+.+...++|.|++.+.+++.+++.+.-..+|+..+..
T Consensus        86 ~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~  134 (200)
T 3cnh_A           86 QPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTS  134 (200)
T ss_dssp             CBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEH
T ss_pred             ccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEee
Confidence            4789999999999866699999999999999999988655566665543

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=82.51  E-value=0.8  Score=36.36  Aligned_cols=49  Identities=12%  Similarity=-0.058  Sum_probs=39.8

Q ss_pred             eccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhh---CCCC---ccceeeecC
Q 027383          171 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKI---DREN---LFSLRLYRP  219 (224)
Q Consensus       171 ~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~I---DP~~---~F~~RLyRd  219 (224)
                      ..|++.++|+.+.+.+.++|.|++...+++.+++.+   +..+   +|+..+..+
T Consensus       113 ~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~  167 (229)
T 4dcc_A          113 IPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSY  167 (229)
T ss_dssp             CCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHH
T ss_pred             ccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeec
Confidence            569999999999977999999999999999888777   4444   466665543

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=82.36  E-value=0.39  Score=37.24  Aligned_cols=16  Identities=25%  Similarity=0.333  Sum_probs=13.6

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         5 ~k~iiFDlDGTL~d~~   20 (211)
T 2i6x_A            5 IRNIVFDLGGVLIHLN   20 (211)
T ss_dssp             CSEEEECSBTTTEEEC
T ss_pred             ceEEEEeCCCeeEecc
Confidence            4689999999999864

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=82.24  E-value=0.38  Score=37.85  Aligned_cols=48  Identities=15%  Similarity=0.178  Sum_probs=38.6

Q ss_pred             eccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          171 ERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       171 ~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ..|++.++|+.+.+. +.++|.|++..  ++.+++.+.-.++|+..+..+.
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~  141 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTT  141 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC--
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhh
Confidence            589999999999976 99999999854  8888988876667777665544

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=82.16  E-value=0.48  Score=35.93  Aligned_cols=14  Identities=43%  Similarity=0.567  Sum_probs=12.1

Q ss_pred             eeEEEeCCCceecc
Q 027383          112 LTVVLDLDETLVCA  125 (224)
Q Consensus       112 ltLVLDLDETLVhs  125 (224)
                      +.+++||||||+..
T Consensus         2 k~i~~DlDGTL~~~   15 (126)
T 1xpj_A            2 KKLIVDLDGTLTQA   15 (126)
T ss_dssp             CEEEECSTTTTBCC
T ss_pred             CEEEEecCCCCCCC
Confidence            46899999999975

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=82.14  E-value=0.43  Score=37.96  Aligned_cols=16  Identities=19%  Similarity=0.252  Sum_probs=13.7

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++|+||||+.+.
T Consensus        28 ik~viFD~DGTL~d~~   43 (229)
T 4dcc_A           28 IKNLLIDLGGVLINLD   43 (229)
T ss_dssp             CCEEEECSBTTTBCBC
T ss_pred             CCEEEEeCCCeEEeCC
Confidence            4789999999999863

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=82.12  E-value=0.38  Score=37.42  Aligned_cols=15  Identities=27%  Similarity=0.151  Sum_probs=12.9

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+.+.
T Consensus         5 k~i~fDlDGTL~d~~   19 (235)
T 2om6_A            5 KLVTFDVWNTLLDLN   19 (235)
T ss_dssp             CEEEECCBTTTBCHH
T ss_pred             eEEEEeCCCCCCCcc
Confidence            578999999999763

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=82.10  E-value=0.43  Score=37.58  Aligned_cols=16  Identities=25%  Similarity=0.133  Sum_probs=13.4

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         4 ~k~viFDlDGTL~d~~   19 (232)
T 1zrn_A            4 IKGIAFDLYGTLFDVH   19 (232)
T ss_dssp             CCEEEECSBTTTEETH
T ss_pred             ceEEEEecCCcccCch
Confidence            3579999999999764

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=82.08  E-value=1.5  Score=33.73  Aligned_cols=16  Identities=13%  Similarity=0.115  Sum_probs=13.5

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++|+||||+.+.
T Consensus         4 ~k~viFDlDGTL~d~~   19 (200)
T 3cnh_A            4 IKALFWDIGGVLLTNG   19 (200)
T ss_dssp             CCEEEECCBTTTBCCS
T ss_pred             ceEEEEeCCCeeECCC
Confidence            4679999999999864

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=82.00  E-value=0.49  Score=36.87  Aligned_cols=17  Identities=41%  Similarity=0.401  Sum_probs=14.2

Q ss_pred             CCeeEEEeCCCceeccc
Q 027383          110 EKLTVVLDLDETLVCAY  126 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~  126 (224)
                      ..+.+++|+||||+.+.
T Consensus         4 ~~k~i~fDlDGTL~d~~   20 (230)
T 3um9_A            4 AIKAVVFDLYGTLYDVY   20 (230)
T ss_dssp             SCCEEEECSBTTTBCGG
T ss_pred             CceEEEEcCCCCcCcch
Confidence            35689999999999864

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=81.91  E-value=2.2  Score=33.37  Aligned_cols=15  Identities=27%  Similarity=0.392  Sum_probs=12.8

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+.+.
T Consensus         3 k~i~fDlDGTL~d~~   17 (233)
T 3nas_A            3 KAVIFDLDGVITDTA   17 (233)
T ss_dssp             CEEEECSBTTTBCHH
T ss_pred             cEEEECCCCCcCCCH
Confidence            578999999999863

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=81.88  E-value=0.44  Score=37.27  Aligned_cols=16  Identities=25%  Similarity=0.368  Sum_probs=13.5

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         7 ~k~i~fDlDGTL~d~~   22 (238)
T 3ed5_A            7 YRTLLFDVDDTILDFQ   22 (238)
T ss_dssp             CCEEEECCBTTTBCHH
T ss_pred             CCEEEEcCcCcCcCCc
Confidence            4689999999999753

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=81.61  E-value=0.51  Score=39.55  Aligned_cols=20  Identities=25%  Similarity=0.056  Sum_probs=15.1

Q ss_pred             CCCCCeeEEEeCCCceeccc
Q 027383          107 QEIEKLTVVLDLDETLVCAY  126 (224)
Q Consensus       107 ~~~~KltLVLDLDETLVhs~  126 (224)
                      .....+.+++||||||+.+.
T Consensus        17 ~~~~~kli~~DlDGTLl~~~   36 (283)
T 3dao_A           17 FQGMIKLIATDIDGTLVKDG   36 (283)
T ss_dssp             --CCCCEEEECCBTTTBSTT
T ss_pred             hccCceEEEEeCcCCCCCCC
Confidence            34456789999999999764

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=81.48  E-value=0.49  Score=37.40  Aligned_cols=16  Identities=25%  Similarity=0.324  Sum_probs=13.4

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++|+||||+.+.
T Consensus        14 ~k~viFD~DGTLvd~~   29 (225)
T 1nnl_A           14 ADAVCFDVDSTVIREE   29 (225)
T ss_dssp             CSEEEEETBTTTBSSC
T ss_pred             CCEEEEeCcccccccc
Confidence            3579999999999863

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=81.43  E-value=0.47  Score=37.12  Aligned_cols=45  Identities=24%  Similarity=0.288  Sum_probs=32.9

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeec
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYR  218 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyR  218 (224)
                      +...|++.++|+.+.+.+.++|.|++...     ++.+.-..+|+..+..
T Consensus       104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~  148 (230)
T 3vay_A          104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCA  148 (230)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEH
T ss_pred             CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEc
Confidence            45789999999999988999999999875     3333333356655543

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=81.41  E-value=0.53  Score=36.66  Aligned_cols=16  Identities=31%  Similarity=0.476  Sum_probs=13.7

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus         6 ~k~i~fDlDGTL~~~~   21 (233)
T 3s6j_A            6 QTSFIFDLDGTLTDSV   21 (233)
T ss_dssp             CCEEEECCBTTTEECH
T ss_pred             CcEEEEcCCCccccCh
Confidence            5689999999999863

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=81.27  E-value=0.6  Score=37.47  Aligned_cols=16  Identities=19%  Similarity=0.059  Sum_probs=13.8

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++|+||||+.+.
T Consensus        14 ~k~i~fDlDGTL~d~~   29 (277)
T 3iru_A           14 VEALILDWAGTTIDFG   29 (277)
T ss_dssp             CCEEEEESBTTTBSTT
T ss_pred             CcEEEEcCCCCcccCC
Confidence            5689999999999863

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=81.21  E-value=0.64  Score=36.09  Aligned_cols=15  Identities=47%  Similarity=0.572  Sum_probs=13.3

Q ss_pred             CeeEEEeCCCceecc
Q 027383          111 KLTVVLDLDETLVCA  125 (224)
Q Consensus       111 KltLVLDLDETLVhs  125 (224)
                      .+.+++|+||||+.+
T Consensus         4 ~k~vifDlDGTL~~~   18 (217)
T 3m1y_A            4 QKLAVFDFDSTLVNA   18 (217)
T ss_dssp             CEEEEEECBTTTBSS
T ss_pred             CcEEEEeCCCCCCCc
Confidence            568999999999985

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=81.14  E-value=0.43  Score=37.14  Aligned_cols=48  Identities=17%  Similarity=0.029  Sum_probs=39.6

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeec
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYR  218 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyR  218 (224)
                      +...|++.++|+.+.+.+.++|.|++...+++.+++.+..  .|+..+..
T Consensus        98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~~--~fd~i~~~  145 (240)
T 3smv_A           98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLGV--EFDHIITA  145 (240)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTCS--CCSEEEEH
T ss_pred             CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcCC--ccCEEEEc
Confidence            3568999999999998899999999999999999988653  46555443

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=81.02  E-value=1.9  Score=36.05  Aligned_cols=50  Identities=10%  Similarity=0.006  Sum_probs=41.0

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhC---CCCccceeeec
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKID---RENLFSLRLYR  218 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~ID---P~~~F~~RLyR  218 (224)
                      +...|++.++|+.+.+ -+.++|.|++...+++.+++.++   -..+|+..+..
T Consensus       129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~  182 (261)
T 1yns_A          129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT  182 (261)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG
T ss_pred             cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec
Confidence            5678999999999975 69999999999999999999765   33467776544

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=81.01  E-value=0.49  Score=38.10  Aligned_cols=15  Identities=20%  Similarity=0.394  Sum_probs=13.0

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+.+.
T Consensus         5 k~viFDlDGTL~ds~   19 (240)
T 2hi0_A            5 KAAIFDMDGTILDTS   19 (240)
T ss_dssp             SEEEECSBTTTEECH
T ss_pred             cEEEEecCCCCccCH
Confidence            579999999999864

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=80.84  E-value=1.6  Score=34.93  Aligned_cols=16  Identities=31%  Similarity=0.092  Sum_probs=13.6

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus        13 ~k~iifDlDGTL~d~~   28 (251)
T 2pke_A           13 IQLVGFDGDDTLWKSE   28 (251)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             eeEEEEeCCCCCccCc
Confidence            4689999999999863

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=80.76  E-value=2.1  Score=36.15  Aligned_cols=15  Identities=27%  Similarity=0.253  Sum_probs=12.8

Q ss_pred             CeeEEEeCCCceecc
Q 027383          111 KLTVVLDLDETLVCA  125 (224)
Q Consensus       111 KltLVLDLDETLVhs  125 (224)
                      .+.+++||||||+..
T Consensus        21 ~k~i~~D~DGTL~~~   35 (306)
T 2oyc_A           21 AQGVLFDCDGVLWNG   35 (306)
T ss_dssp             CSEEEECSBTTTEET
T ss_pred             CCEEEECCCCcEecC
Confidence            457999999999974

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=80.74  E-value=0.56  Score=37.22  Aligned_cols=15  Identities=40%  Similarity=0.399  Sum_probs=13.3

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++|+||||+.+.
T Consensus        30 k~iifDlDGTL~d~~   44 (240)
T 3sd7_A           30 EIVLFDLDGTLTDPK   44 (240)
T ss_dssp             SEEEECSBTTTEECH
T ss_pred             cEEEEecCCcCccCH
Confidence            789999999999763

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=80.70  E-value=0.5  Score=38.67  Aligned_cols=50  Identities=12%  Similarity=0.129  Sum_probs=37.2

Q ss_pred             EeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          170 FERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       170 ~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ...|++.++|+.+.+. +-+.+  ++....+..+++.+.-.++|+..+..+.+
T Consensus       116 ~~~p~~~~ll~~Lk~~g~~i~i--~~~~~~~~~~L~~~gl~~~Fd~i~~~~~~  166 (250)
T 4gib_A          116 DILPGIESLLIDVKSNNIKIGL--SSASKNAINVLNHLGISDKFDFIADAGKC  166 (250)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEE--CCSCTTHHHHHHHHTCGGGCSEECCGGGC
T ss_pred             ccchhHHHHHHHHHhccccccc--ccccchhhhHhhhcccccccceeeccccc
Confidence            3579999999999865 44554  44456788999988777788887766554

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=80.66  E-value=0.51  Score=38.12  Aligned_cols=49  Identities=10%  Similarity=0.004  Sum_probs=38.2

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc-ceeee
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF-SLRLY  217 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F-~~RLy  217 (224)
                      ....|++.++|+.+.+. +.++|.|++...+++.+++.+.-.++| +..++
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~  152 (267)
T 1swv_A          102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVT  152 (267)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBC
T ss_pred             cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheec
Confidence            34679999999999865 899999999999999999887544443 44333

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=80.64  E-value=0.51  Score=36.88  Aligned_cols=15  Identities=27%  Similarity=0.080  Sum_probs=12.9

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++|+||||+.+.
T Consensus         3 k~i~fDlDGTL~d~~   17 (234)
T 3u26_A            3 RAVFFDSLGTLNSVE   17 (234)
T ss_dssp             CEEEECSTTTTBCHH
T ss_pred             cEEEEcCCCcccccc
Confidence            578999999999764

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=80.60  E-value=2.2  Score=36.55  Aligned_cols=15  Identities=27%  Similarity=0.397  Sum_probs=13.1

Q ss_pred             CeeEEEeCCCceecc
Q 027383          111 KLTVVLDLDETLVCA  125 (224)
Q Consensus       111 KltLVLDLDETLVhs  125 (224)
                      .+.+++||||||+..
T Consensus        27 ikli~~DlDGTLl~~   41 (301)
T 2b30_A           27 IKLLLIDFDGTLFVD   41 (301)
T ss_dssp             CCEEEEETBTTTBCC
T ss_pred             ccEEEEECCCCCcCC
Confidence            468999999999976

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=80.55  E-value=0.63  Score=36.45  Aligned_cols=16  Identities=38%  Similarity=0.341  Sum_probs=13.6

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++|+||||+.+.
T Consensus         4 ~k~i~FDlDGTL~d~~   19 (233)
T 3umb_A            4 IRAVVFDAYGTLFDVY   19 (233)
T ss_dssp             CCEEEECSBTTTEETH
T ss_pred             ceEEEEeCCCcccccH
Confidence            4689999999999863

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=80.46  E-value=0.58  Score=37.26  Aligned_cols=16  Identities=25%  Similarity=0.098  Sum_probs=13.7

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      .+.+++||||||+.+.
T Consensus        14 ~k~viFDlDGTL~d~~   29 (240)
T 2no4_A           14 LRACVFDAYGTLLDVH   29 (240)
T ss_dssp             CCEEEECCBTTTBCTT
T ss_pred             ccEEEEeCCCcccccH
Confidence            4689999999999764

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=80.41  E-value=0.59  Score=37.45  Aligned_cols=51  Identities=16%  Similarity=0.120  Sum_probs=37.8

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHh-hCCCCccceeeecC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDK-IDRENLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~-IDP~~~F~~RLyRd  219 (224)
                      +...|++.++|+.+.+. +.++|.|++.+.++...+.. +.-..+|+..+..+
T Consensus       111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~  163 (250)
T 3l5k_A          111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGD  163 (250)
T ss_dssp             CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTT
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecc
Confidence            45789999999999976 99999999998887766532 22223566665554

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=80.19  E-value=0.49  Score=37.82  Aligned_cols=15  Identities=40%  Similarity=0.547  Sum_probs=12.9

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||+.+.
T Consensus         3 k~iiFDlDGTL~d~~   17 (241)
T 2hoq_A            3 KVIFFDLDDTLVDTS   17 (241)
T ss_dssp             CEEEECSBTTTBCHH
T ss_pred             cEEEEcCCCCCCCCh
Confidence            478999999999864

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=80.17  E-value=0.55  Score=37.57  Aligned_cols=15  Identities=27%  Similarity=0.273  Sum_probs=13.2

Q ss_pred             CeeEEEeCCCceecc
Q 027383          111 KLTVVLDLDETLVCA  125 (224)
Q Consensus       111 KltLVLDLDETLVhs  125 (224)
                      -+.+++||||||+.+
T Consensus        12 ~k~i~fDlDGTLl~s   26 (271)
T 2x4d_A           12 VRGVLLDISGVLYDS   26 (271)
T ss_dssp             CCEEEECCBTTTEEC
T ss_pred             CCEEEEeCCCeEEec
Confidence            467999999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	224
d1ta0a_	181	c.108.1.16 (A:) Carboxy-terminal domain RNA polyme	2e-18

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 181

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 2e-18
 Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 23/120 (19%)

Query: 107 QEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDG--KPKI 164
           Q+ +K+ VV+DLDETLV +                           ++D          +
Sbjct: 11  QDSDKICVVIDLDETLVHSSFKP---------------------VNNADFIIPVEIDGVV 49

Query: 165 NYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVST 224
           + V V +RP + EFL+++ E  + VLFTA L  YA P+ D +D+   F  RL+R S V  
Sbjct: 50  HQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH 109

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	224
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	99.93
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	97.81
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	97.62
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	96.98
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	96.85
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	96.45
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	95.57
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	95.49
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	95.16
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	93.7
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	93.67
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	93.48
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	92.79
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	92.68
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	92.66
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	92.49
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	92.43
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	92.38
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	92.25
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	92.13
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	91.35
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	91.24
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	91.04
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	90.94
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	89.98
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	89.86
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	89.73
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	89.71
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	89.53
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	89.46
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	89.17
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	88.28
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	88.05
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	87.51
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	87.11
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	86.76
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	86.57
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	86.5
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	85.8
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	85.78
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	84.63
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	84.54
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	84.23
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	83.73
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	83.42
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	82.5
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	81.75
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	81.75
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	81.58
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	80.33

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.8e-27  Score=193.98  Aligned_cols=99  Identities=41%  Similarity=0.605  Sum_probs=79.6

Q ss_pred             CCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhC
Q 027383          106 GQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEF  185 (224)
Q Consensus       106 ~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~  185 (224)
                      +...+|+|||||||||||||.......         .   .|.+     .+...+  ....++|++|||++|||++++++
T Consensus        10 ~~~~~k~~LVLDLDeTLihs~~~~~~~---------~---~~~~-----~~~~~~--~~~~~~v~~RP~l~eFL~~l~~~   70 (181)
T d1ta0a_          10 AQDSDKICVVIDLDETLVHSSFKPVNN---------A---DFII-----PVEIDG--VVHQVYVLKRPHVDEFLQRMGEL   70 (181)
T ss_dssp             GGGTTSCEEEECCBTTTEEEESSCCTT---------C---SEEE-----EEEETT--EEEEEEEEECTTHHHHHHHHHHH
T ss_pred             cccCCCeEEEEeCCCCEEccccCCCCC---------c---ccee-----eecccc--eeeeeEEecCCCHHHHHHHHHhc
Confidence            445689999999999999986432100         0   1221     112233  24678999999999999999999


Q ss_pred             ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcCC
Q 027383          186 ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVS  223 (224)
Q Consensus       186 fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~~  223 (224)
                      |||+|||||++.||++|++.|||++.|.+++||++|..
T Consensus        71 yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~  108 (181)
T d1ta0a_          71 FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF  108 (181)
T ss_dssp             SEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEE
T ss_pred             eEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeee
Confidence            99999999999999999999999999999999999964

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=3e-05  Score=59.67  Aligned_cols=48  Identities=19%  Similarity=0.194  Sum_probs=39.3

Q ss_pred             EEEeccCHHHHHHHhhhC-ceEEEEcCCc-hhhHHHHHHhhCCCCcccee
Q 027383          168 TVFERPGLHEFLKKLAEF-ADLVLFTAGL-EGYARPLVDKIDRENLFSLR  215 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~-k~YA~~Vld~IDP~~~F~~R  215 (224)
                      .+...||+.++|+.+.+. +.+.|-|++. ..+++.+++.+.....|...
T Consensus        44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~   93 (164)
T d1u7pa_          44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQR   93 (164)
T ss_dssp             EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEE
T ss_pred             ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceee
Confidence            377899999999999876 9999999765 57889999988777665554

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=97.62  E-value=1.3e-05  Score=59.79  Aligned_cols=69  Identities=23%  Similarity=0.245  Sum_probs=48.4

Q ss_pred             CCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh-Cce
Q 027383          109 IEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE-FAD  187 (224)
Q Consensus       109 ~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse-~fE  187 (224)
                      .+++++|+|+||||+.+....                .|+..      .+.        -....|++.++|+.+.+ -|+
T Consensus         5 ~kpk~vifDiDgTL~~~~~~~----------------~~~~~------~~~--------~~~~~p~v~~~l~~l~~~G~~   54 (149)
T d1ltqa1           5 GKPKAVIFDVDGTLAKMNGRG----------------PYDLE------KCD--------TDVINPMVVELSKMYALMGYQ   54 (149)
T ss_dssp             TSCEEEEEETBTTTBCCSSCC----------------TTCGG------GGG--------GCCBCHHHHHHHHHHHHTTCE
T ss_pred             CCCcEEEEEcCCCcEeCCCCC----------------cCCcc------ccc--------cCccCHHHHHHHHHHHhccCe
Confidence            477899999999999763211                01100      000        02346999999999985 799


Q ss_pred             EEEEcCCchhhHHHHHHhhC
Q 027383          188 LVLFTAGLEGYARPLVDKID  207 (224)
Q Consensus       188 IvIFTAg~k~YA~~Vld~ID  207 (224)
                      |++.|+....|++...+.|.
T Consensus        55 Iii~T~R~~~~~~~t~~~l~   74 (149)
T d1ltqa1          55 IVVVSGRESGTKEDPTKYYR   74 (149)
T ss_dssp             EEEEECSCCCCSSSTTHHHH
T ss_pred             EEEEecCcHHHHHHHHHHHH
Confidence            99999998888777666654

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=96.98  E-value=0.00068  Score=51.47  Aligned_cols=42  Identities=21%  Similarity=0.179  Sum_probs=36.2

Q ss_pred             ccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCc-cc
Q 027383          172 RPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENL-FS  213 (224)
Q Consensus       172 RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~-F~  213 (224)
                      .|++-++|+++.+ -++|+||||-...+-+..++.|..+++ |+
T Consensus        23 i~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~yd   66 (122)
T d2obba1          23 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFY   66 (122)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCS
T ss_pred             cHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCCce
Confidence            5889999999975 499999999999999999999887763 44

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=96.85  E-value=0.00046  Score=53.74  Aligned_cols=42  Identities=19%  Similarity=0.395  Sum_probs=37.4

Q ss_pred             EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCC
Q 027383          169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDREN  210 (224)
Q Consensus       169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~  210 (224)
                      +.++||+.++|+.+. +.+.++|.|++.+.+++++++.+....
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~  116 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKD  116 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGG
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCcc
Confidence            568999999999996 559999999999999999999887654

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=96.45  E-value=0.001  Score=50.90  Aligned_cols=51  Identities=18%  Similarity=0.155  Sum_probs=38.7

Q ss_pred             eccCHHHHHHHhh-hCceEEEEcCCc------------hhhHHHHHHhhCCCCc-cceeee-cCCc
Q 027383          171 ERPGLHEFLKKLA-EFADLVLFTAGL------------EGYARPLVDKIDRENL-FSLRLY-RPST  221 (224)
Q Consensus       171 ~RPgL~EFL~~ls-e~fEIvIFTAg~------------k~YA~~Vld~IDP~~~-F~~RLy-RdsC  221 (224)
                      -.|..-|++..+. +-+.|+||||..            ..+.+...+.|..+++ ++..++ ++.|
T Consensus        25 P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~Yd~Li~gKP~~   90 (124)
T d1xpja_          25 PRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVPYDEILVGKPWC   90 (124)
T ss_dssp             BCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCCCSEEEECCCCC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCCceEEEECCCCC
Confidence            3677889999994 669999999983            5678889999998874 544433 4444

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=95.57  E-value=0.0082  Score=48.35  Aligned_cols=26  Identities=15%  Similarity=0.100  Sum_probs=21.9

Q ss_pred             EeccCHHHHHHHhhh-CceEEEEcCCc
Q 027383          170 FERPGLHEFLKKLAE-FADLVLFTAGL  195 (224)
Q Consensus       170 ~~RPgL~EFL~~lse-~fEIvIFTAg~  195 (224)
                      ++-||+.|.|+++.+ -|.++|.|+..
T Consensus        48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~   74 (209)
T d2o2xa1          48 VLRPQMLPAIATANRAGIPVVVVTNQS   74 (209)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECH
T ss_pred             EecccHHHHHHHHHhhCCeEEEecccc
Confidence            356999999999986 59999999843

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.0072  Score=45.97  Aligned_cols=16  Identities=25%  Similarity=0.368  Sum_probs=13.6

Q ss_pred             CCeeEEEeCCCceecc
Q 027383          110 EKLTVVLDLDETLVCA  125 (224)
Q Consensus       110 ~KltLVLDLDETLVhs  125 (224)
                      +++.+++||||||++.
T Consensus         2 ~~kl~~fDlDGTLl~~   17 (243)
T d2amya1           2 GPALCLFDVDGTLTAP   17 (243)
T ss_dssp             CSEEEEEESBTTTBCT
T ss_pred             CCEEEEEcCcCCeeCC
Confidence            5677888999999975

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=95.16  E-value=0.0083  Score=46.42  Aligned_cols=27  Identities=30%  Similarity=0.228  Sum_probs=23.2

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCc
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGL  195 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~  195 (224)
                      ++.-|+..|.|+++.+ .|.++|+|+..
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~   56 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQD   56 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccc
Confidence            4567999999999996 59999999864

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=93.70  E-value=0.05  Score=43.22  Aligned_cols=15  Identities=27%  Similarity=0.372  Sum_probs=12.8

Q ss_pred             CeeEEEeCCCceecc
Q 027383          111 KLTVVLDLDETLVCA  125 (224)
Q Consensus       111 KltLVLDLDETLVhs  125 (224)
                      -+.+++||||||++.
T Consensus         3 ik~VifDlDGTL~~~   17 (250)
T d2c4na1           3 IKNVICDIDGVLMHD   17 (250)
T ss_dssp             CCEEEEECBTTTEET
T ss_pred             CCEEEEECCCeeEEC
Confidence            367999999999874

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=93.67  E-value=0.092  Score=41.05  Aligned_cols=32  Identities=9%  Similarity=0.060  Sum_probs=22.2

Q ss_pred             HHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhC
Q 027383          176 HEFLKKLAEF-ADLVLFTAGLEGYARPLVDKID  207 (224)
Q Consensus       176 ~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~ID  207 (224)
                      .+.|+++.+. ..++|-|..+...+..+++.+.
T Consensus        27 ~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~   59 (271)
T d1rkqa_          27 KNAIAAARARGVNVVLTTGRPYAGVHNYLKELH   59 (271)
T ss_dssp             HHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTT
T ss_pred             HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhc
Confidence            4566666544 7777777777777877777763

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.48  E-value=0.046  Score=44.01  Aligned_cols=58  Identities=24%  Similarity=0.281  Sum_probs=39.7

Q ss_pred             CCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh-Cc
Q 027383          108 EIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE-FA  186 (224)
Q Consensus       108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse-~f  186 (224)
                      ...++.+++|+||||+......                .|..          ..   .. +..+.|++.+-|+.+++ -|
T Consensus        18 ~~~~Kia~fDrDGtLik~~~~~----------------~~~~----------~~---~d-~~~l~~~v~~~i~~L~~~gy   67 (195)
T d1yj5a1          18 KPQGKVAAFDLDGTLITTRSGK----------------VFPT----------SP---SD-WRILYPEIPKKLQELAAEGY   67 (195)
T ss_dssp             CCCSCEEEECSBTTTEECSSSC----------------SSCS----------ST---TC-CEESCTTHHHHHHHHHHHTC
T ss_pred             CCcCcEEEEECCCceEeeCCCC----------------cCCC----------Ch---hh-ceeccCCHHHHHHHHHhCCc
Confidence            3467888999999999853100                0100          00   01 24568999999999985 69


Q ss_pred             eEEEEcCCc
Q 027383          187 DLVLFTAGL  195 (224)
Q Consensus       187 EIvIFTAg~  195 (224)
                      .++|+|+..
T Consensus        68 ~iiIvTNQ~   76 (195)
T d1yj5a1          68 KLVIFTNQM   76 (195)
T ss_dssp             EEEEEEECH
T ss_pred             EEEEecCcc
Confidence            999999963

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=92.79  E-value=0.1  Score=39.15  Aligned_cols=53  Identities=23%  Similarity=0.186  Sum_probs=46.2

Q ss_pred             EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ..+..|++.++|+++.+. +.+.|.|++.+.+++.+++.++-.++|++.+..+.
T Consensus        93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~  146 (224)
T d2hsza1          93 ISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQS  146 (224)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTT
T ss_pred             ccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccc
Confidence            356789999999999865 99999999999999999999988788888776554

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=92.68  E-value=0.1  Score=39.17  Aligned_cols=17  Identities=41%  Similarity=0.428  Sum_probs=13.0

Q ss_pred             CCeeEEEeCCCceeccc
Q 027383          110 EKLTVVLDLDETLVCAY  126 (224)
Q Consensus       110 ~KltLVLDLDETLVhs~  126 (224)
                      ++..++.||||||+...
T Consensus         3 ~~~li~~DlDGTLl~~~   19 (232)
T d1xvia_           3 QPLLVFSDLDGTLLDSH   19 (232)
T ss_dssp             CCEEEEEECTTTTSCSS
T ss_pred             CCEEEEEECCCCccCCc
Confidence            45667779999999753

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.66  E-value=0.023  Score=42.11  Aligned_cols=52  Identities=17%  Similarity=0.241  Sum_probs=42.1

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ....+++.+.++.+.+ .+.+++.|++...++....+.......+...+..+.
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD  126 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccc
Confidence            4578899999999985 489999999999999999999887766665554443

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=92.49  E-value=0.1  Score=41.10  Aligned_cols=14  Identities=29%  Similarity=0.384  Sum_probs=12.4

Q ss_pred             eeEEEeCCCceecc
Q 027383          112 LTVVLDLDETLVCA  125 (224)
Q Consensus       112 ltLVLDLDETLVhs  125 (224)
                      +.+++||||||++.
T Consensus         8 k~vlFDlDGTL~~~   21 (261)
T d1vjra_           8 ELFILDMDGTFYLD   21 (261)
T ss_dssp             CEEEECCBTTTEET
T ss_pred             CEEEEeCCCeeEEC
Confidence            57899999999975

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.43  E-value=0.083  Score=40.61  Aligned_cols=51  Identities=20%  Similarity=0.132  Sum_probs=44.9

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      ...+|++.++|+.+++.+.++|.|++...+.+.+++.++-.++|+..++.+
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~  149 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSE  149 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHH
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhcccccccccccccccc
Confidence            456899999999999999999999999999999999988777888776543

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=92.38  E-value=0.069  Score=40.83  Aligned_cols=26  Identities=19%  Similarity=0.142  Sum_probs=22.3

Q ss_pred             eccCHHHHHHHhhh-CceEEEEcCCch
Q 027383          171 ERPGLHEFLKKLAE-FADLVLFTAGLE  196 (224)
Q Consensus       171 ~RPgL~EFL~~lse-~fEIvIFTAg~k  196 (224)
                      +=||+.|.|+.+.+ -|.++|.|+...
T Consensus        28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~   54 (182)
T d2gmwa1          28 FIDGVIDAMRELKKMGFALVVVTNQSG   54 (182)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred             ECCCHHHHHHHHhhcCchhhhhhccch
Confidence            45999999999995 599999999763

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.25  E-value=0.11  Score=38.85  Aligned_cols=13  Identities=38%  Similarity=0.514  Sum_probs=10.2

Q ss_pred             eEE-EeCCCceecc
Q 027383          113 TVV-LDLDETLVCA  125 (224)
Q Consensus       113 tLV-LDLDETLVhs  125 (224)
                      .|+ +||||||+..
T Consensus         2 ~i~lFDlDGTLl~~   15 (244)
T d2fuea1           2 VLCLFDVDGTLTPA   15 (244)
T ss_dssp             EEEEEESBTTTBST
T ss_pred             EEEEEccccCccCC
Confidence            455 5999999965

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=92.13  E-value=0.12  Score=38.93  Aligned_cols=50  Identities=16%  Similarity=0.043  Sum_probs=44.4

Q ss_pred             eccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          171 ERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       171 ~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ..||+.++|+++.+ .+.+.|.|++.+.+++.+++.+.=.++|+..++.++
T Consensus        89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~  139 (218)
T d1te2a_          89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEK  139 (218)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTT
T ss_pred             ccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccc
Confidence            57999999999975 599999999999999999999988788998877654

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=91.35  E-value=0.12  Score=41.05  Aligned_cols=15  Identities=27%  Similarity=0.284  Sum_probs=12.8

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||++..
T Consensus         3 k~vlFDlDGTL~~~~   17 (253)
T d1wvia_           3 KGYLIDLDGTIYKGK   17 (253)
T ss_dssp             CEEEEECBTTTEETT
T ss_pred             CEEEEcCcCceEECC
Confidence            478999999999863

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=91.24  E-value=0.086  Score=39.85  Aligned_cols=53  Identities=11%  Similarity=0.077  Sum_probs=45.5

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      +...||+.++|+.+.+.+-+.|-|++.+..++.+++.+.-.++|+..+..+.+
T Consensus        81 ~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~  133 (207)
T d2hdoa1          81 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDT  133 (207)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGS
T ss_pred             cccccchhhhhhhhccccccccccccccccccccccccccccccccccccccc
Confidence            55789999999999999999999999999999999998777778777665443

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=91.04  E-value=0.22  Score=38.91  Aligned_cols=15  Identities=33%  Similarity=0.461  Sum_probs=12.4

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||++..
T Consensus         2 Kli~~DlDGTLl~~~   16 (285)
T d1nrwa_           2 KLIAIDLDGTLLNSK   16 (285)
T ss_dssp             CEEEEECCCCCSCTT
T ss_pred             eEEEEECCccccCCC
Confidence            368999999999753

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.94  E-value=0.26  Score=36.80  Aligned_cols=14  Identities=21%  Similarity=0.475  Sum_probs=12.4

Q ss_pred             eeEEEeCCCceecc
Q 027383          112 LTVVLDLDETLVCA  125 (224)
Q Consensus       112 ltLVLDLDETLVhs  125 (224)
                      +.+++|+||||++.
T Consensus         3 K~i~~D~DGTL~~~   16 (230)
T d1wr8a_           3 KAISIDIDGTITYP   16 (230)
T ss_dssp             CEEEEESTTTTBCT
T ss_pred             eEEEEecCCCCcCC
Confidence            57899999999975

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.98  E-value=0.31  Score=36.78  Aligned_cols=15  Identities=40%  Similarity=0.709  Sum_probs=12.8

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.|++||||||++..
T Consensus         3 Kli~~DlDGTLl~~~   17 (243)
T d1wzca1           3 RLIFLDIDKTLIPGY   17 (243)
T ss_dssp             EEEEECCBTTTBSSS
T ss_pred             EEEEEeCCCCCCCCC
Confidence            678999999999754

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=89.86  E-value=0.3  Score=38.36  Aligned_cols=15  Identities=40%  Similarity=0.461  Sum_probs=12.5

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++||||||++..
T Consensus         3 Kli~~DlDGTL~~~~   17 (267)
T d1nf2a_           3 RVFVFDLDGTLLNDN   17 (267)
T ss_dssp             CEEEEECCCCCSCTT
T ss_pred             EEEEEeCCccccCCc
Confidence            368999999999764

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.73  E-value=0.18  Score=39.63  Aligned_cols=14  Identities=29%  Similarity=0.396  Sum_probs=12.0

Q ss_pred             eeEEEeCCCceecc
Q 027383          112 LTVVLDLDETLVCA  125 (224)
Q Consensus       112 ltLVLDLDETLVhs  125 (224)
                      +.+++||||||+..
T Consensus         3 k~v~fDlDGTL~~~   16 (253)
T d1yv9a1           3 QGYLIDLDGTIYLG   16 (253)
T ss_dssp             CEEEECCBTTTEET
T ss_pred             CEEEEcCCCccEeC
Confidence            47899999999864

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=89.71  E-value=0.38  Score=36.46  Aligned_cols=52  Identities=19%  Similarity=0.254  Sum_probs=45.0

Q ss_pred             EEeccCHHHHHHHhhhC--ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          169 VFERPGLHEFLKKLAEF--ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~--fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ...-||+.++|+++.+.  +-+.|.|++.+..+..+++.++-.++|+...+.+.
T Consensus        90 ~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~  143 (228)
T d2hcfa1          90 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADD  143 (228)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTT
T ss_pred             ceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccc
Confidence            45679999999999865  67889999999999999999998888988777654

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=89.53  E-value=0.21  Score=37.41  Aligned_cols=50  Identities=22%  Similarity=0.223  Sum_probs=41.4

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      +...||+.++|+.+.+. +.+.|.|++.+ ++..+++.++-.++|+..+..+
T Consensus        81 ~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~  131 (204)
T d2go7a1          81 VVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQ  131 (204)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGG
T ss_pred             CcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccc
Confidence            55679999999999865 99999998765 7888999988777888776544

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=89.46  E-value=0.19  Score=37.56  Aligned_cols=52  Identities=13%  Similarity=0.132  Sum_probs=45.5

Q ss_pred             EEEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          168 TVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       168 ~V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      .....|++.++|+.+++.+.++|.|++.+.+++.+++.+.-..+|+..+..+
T Consensus        82 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~  133 (210)
T d2ah5a1          82 EAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS  133 (210)
T ss_dssp             SCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC
T ss_pred             cccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhccccccccccccc
Confidence            3567899999999999999999999999999999999988777787766433

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.17  E-value=0.17  Score=38.84  Aligned_cols=51  Identities=16%  Similarity=0.197  Sum_probs=44.5

Q ss_pred             EeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383          170 FERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS  220 (224)
Q Consensus       170 ~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds  220 (224)
                      ...|+..++|+++++.+-++|.|++...+.+.+++...-..+|++.+.-++
T Consensus       109 ~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~  159 (247)
T d2gfha1         109 ILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGE  159 (247)
T ss_dssp             CCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGG
T ss_pred             ccCccHHHHHHHhhcccceEEeecccchhhhhhhhhccccccccccccccc
Confidence            456999999999999999999999999999999999877677888776544

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=88.28  E-value=0.08  Score=39.81  Aligned_cols=16  Identities=38%  Similarity=0.436  Sum_probs=13.7

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      -+++++|+||||+++.
T Consensus         4 ik~VifD~DGTL~ds~   19 (210)
T d2ah5a1           4 ITAIFFDLDGTLVDSS   19 (210)
T ss_dssp             CCEEEECSBTTTEECH
T ss_pred             CCEEEEeCCCccccCH
Confidence            4689999999999863

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=88.05  E-value=0.24  Score=38.23  Aligned_cols=16  Identities=38%  Similarity=0.513  Sum_probs=13.6

Q ss_pred             CCeeEEEeCCCceecc
Q 027383          110 EKLTVVLDLDETLVCA  125 (224)
Q Consensus       110 ~KltLVLDLDETLVhs  125 (224)
                      +|+.+++||||||+..
T Consensus         2 ~~~li~~DlDGTL~~~   17 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGD   17 (244)
T ss_dssp             CSEEEEECTBTTTBSC
T ss_pred             CceEEEEECcccCCCC
Confidence            5778889999999954

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=87.51  E-value=0.2  Score=38.33  Aligned_cols=15  Identities=20%  Similarity=0.175  Sum_probs=12.5

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++|+||||+...
T Consensus         4 Kli~~D~DGTL~~~~   18 (225)
T d1l6ra_           4 RLAAIDVDGNLTDRD   18 (225)
T ss_dssp             CEEEEEHHHHSBCTT
T ss_pred             EEEEEecCCCCcCCC
Confidence            578999999999653

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=87.11  E-value=0.26  Score=38.14  Aligned_cols=14  Identities=29%  Similarity=0.432  Sum_probs=11.8

Q ss_pred             CeeEEEeCCCceec
Q 027383          111 KLTVVLDLDETLVC  124 (224)
Q Consensus       111 KltLVLDLDETLVh  124 (224)
                      =+.|++||||||+.
T Consensus        10 ikli~~DlDGTLl~   23 (283)
T d2b30a1          10 IKLLLIDFDGTLFV   23 (283)
T ss_dssp             CCEEEEETBTTTBC
T ss_pred             ccEEEEECCCCCcC
Confidence            35889999999983

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=86.76  E-value=0.097  Score=40.04  Aligned_cols=16  Identities=31%  Similarity=0.451  Sum_probs=13.9

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      |+.|++|+||||+++.
T Consensus         2 ~klviFD~DGTL~d~~   17 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVE   17 (228)
T ss_dssp             CEEEEECCBTTTEEEC
T ss_pred             ceEEEEeCCCCcccCH
Confidence            6779999999999874

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.57  E-value=0.2  Score=38.97  Aligned_cols=47  Identities=23%  Similarity=0.485  Sum_probs=39.3

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCC--Ccccee
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRE--NLFSLR  215 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~--~~F~~R  215 (224)
                      +.++||..++++++.+ -+.++|-|++.+.+++++++.+.-+  ++|.++
T Consensus        81 ~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~  130 (217)
T d1nnla_          81 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANR  130 (217)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEEC
T ss_pred             cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeee
Confidence            5679999999999986 5999999999999999999988543  344443

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=86.50  E-value=0.15  Score=39.84  Aligned_cols=14  Identities=29%  Similarity=0.444  Sum_probs=11.8

Q ss_pred             eEEEeCCCceeccc
Q 027383          113 TVVLDLDETLVCAY  126 (224)
Q Consensus       113 tLVLDLDETLVhs~  126 (224)
                      .+++||||||+.+.
T Consensus         4 li~~DlDGTLl~~~   17 (269)
T d1rlma_           4 VIVTDMDGTFLNDA   17 (269)
T ss_dssp             EEEECCCCCCSCTT
T ss_pred             EEEEeCCccCcCCC
Confidence            58999999999753

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=85.80  E-value=0.11  Score=38.87  Aligned_cols=15  Identities=40%  Similarity=0.450  Sum_probs=13.0

Q ss_pred             eeEEEeCCCceeccc
Q 027383          112 LTVVLDLDETLVCAY  126 (224)
Q Consensus       112 ltLVLDLDETLVhs~  126 (224)
                      +.+++|+||||+++.
T Consensus         5 k~iiFD~DGTL~Ds~   19 (224)
T d2hsza1           5 KLIGFDLDGTLVNSL   19 (224)
T ss_dssp             SEEEECSBTTTEECH
T ss_pred             CEEEEeCCCCcccCH
Confidence            678999999999863

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.78  E-value=0.12  Score=37.89  Aligned_cols=45  Identities=20%  Similarity=0.349  Sum_probs=37.5

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccc
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFS  213 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~  213 (224)
                      +...|+...+.+...+.+.+++.+.+....++.+...+.....+.
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  112 (206)
T d1rkua_          68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLC  112 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEE
T ss_pred             ccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhc
Confidence            567889999999999999999999999999999998887655433

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=84.63  E-value=0.28  Score=36.45  Aligned_cols=12  Identities=50%  Similarity=0.592  Sum_probs=10.4

Q ss_pred             eEEEeCCCceec
Q 027383          113 TVVLDLDETLVC  124 (224)
Q Consensus       113 tLVLDLDETLVh  124 (224)
                      .|++||||||+.
T Consensus         2 Li~~DlDGTL~~   13 (229)
T d1u02a_           2 LIFLDYDGTLVP   13 (229)
T ss_dssp             EEEEECBTTTBC
T ss_pred             EEEEEecCCCCC
Confidence            479999999994

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=84.54  E-value=0.34  Score=37.46  Aligned_cols=53  Identities=9%  Similarity=-0.003  Sum_probs=43.0

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc-ceeeecCCc
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF-SLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F-~~RLyRdsC  221 (224)
                      +...||+.++|+.+.+. +-+.|.|++.+.+++.+++.+.-.++| +..++.+++
T Consensus        98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~  152 (257)
T d1swva_          98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDV  152 (257)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGS
T ss_pred             CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccc
Confidence            45789999999999866 999999999999999999998766654 455555544

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=84.23  E-value=0.14  Score=38.62  Aligned_cols=47  Identities=15%  Similarity=0.166  Sum_probs=40.0

Q ss_pred             EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeee
Q 027383          169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLY  217 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLy  217 (224)
                      +...|++.++|+++...  .+|-|++.+.+++.+++.++-.++|+..++
T Consensus        84 ~~~~~g~~~~L~~l~~~--~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~  130 (222)
T d2fdra1          84 VKIIDGVKFALSRLTTP--RCICSNSSSHRLDMMLTKVGLKPYFAPHIY  130 (222)
T ss_dssp             CCBCTTHHHHHHHCCSC--EEEEESSCHHHHHHHHHHTTCGGGTTTCEE
T ss_pred             cchhhhHHHHhhhcccc--ceeeeecchhhhhhhhcccccccccceeec
Confidence            56789999999999754  578899999999999999988888776554

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.73  E-value=0.28  Score=41.28  Aligned_cols=49  Identities=20%  Similarity=0.328  Sum_probs=40.5

Q ss_pred             EEEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCC--C--ccceee
Q 027383          168 TVFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRE--N--LFSLRL  216 (224)
Q Consensus       168 ~V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~--~--~F~~RL  216 (224)
                      .+.+|||.+||++.+. ....++|+++|-..+++++++.+...  +  ++++++
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l  186 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFM  186 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECE
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEE
Confidence            3779999999999998 56899999999999999999997432  2  455553

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.42  E-value=0.18  Score=37.81  Aligned_cols=16  Identities=44%  Similarity=0.659  Sum_probs=13.4

Q ss_pred             CeeEEEeCCCceeccc
Q 027383          111 KLTVVLDLDETLVCAY  126 (224)
Q Consensus       111 KltLVLDLDETLVhs~  126 (224)
                      |..||+|+||||+.+.
T Consensus         1 ~~a~iFD~DGTL~ds~   16 (204)
T d2go7a1           1 KTAFIWDLDGTLLDSY   16 (204)
T ss_dssp             CCEEEECTBTTTEECH
T ss_pred             CEEEEEcCCCcCccCH
Confidence            4578999999999763

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.50  E-value=0.19  Score=36.96  Aligned_cols=50  Identities=6%  Similarity=-0.156  Sum_probs=34.0

Q ss_pred             EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhh----CCCCccceeeec
Q 027383          169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKI----DRENLFSLRLYR  218 (224)
Q Consensus       169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~I----DP~~~F~~RLyR  218 (224)
                      ...+|++.++|.++.+ .+.+.|-|++....++..++..    +-.++|++.++.
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s  152 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIES  152 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEH
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEec
Confidence            4678999999999975 5889999988766555444322    222356666553

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=81.75  E-value=0.91  Score=33.58  Aligned_cols=50  Identities=10%  Similarity=0.153  Sum_probs=40.4

Q ss_pred             EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383          169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP  219 (224)
Q Consensus       169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd  219 (224)
                      ....||+.++|+++++. +-++|.|++.+ ++..+++.++-.++|+..+..+
T Consensus        78 ~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~-~~~~~l~~~~l~~~fd~i~~~~  128 (187)
T d2fi1a1          78 PILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSS  128 (187)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGG
T ss_pred             CcccchhHHHHHHHHhhhccccccccCcc-chhhhhhhhccccccccccccc
Confidence            34579999999999865 99999998765 6667888888777888877654

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=81.75  E-value=0.21  Score=37.56  Aligned_cols=14  Identities=29%  Similarity=0.593  Sum_probs=12.3

Q ss_pred             eeEEEeCCCceecc
Q 027383          112 LTVVLDLDETLVCA  125 (224)
Q Consensus       112 ltLVLDLDETLVhs  125 (224)
                      +.+|+|+||||+++
T Consensus         4 ~a~iFD~DGTL~dt   17 (218)
T d1te2a_           4 LAAIFDMDGLLIDS   17 (218)
T ss_dssp             CEEEECCBTTTBCC
T ss_pred             eEEEECCCCcccCC
Confidence            46899999999985

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=81.58  E-value=0.22  Score=37.48  Aligned_cols=14  Identities=29%  Similarity=0.515  Sum_probs=12.4

Q ss_pred             eeEEEeCCCceecc
Q 027383          112 LTVVLDLDETLVCA  125 (224)
Q Consensus       112 ltLVLDLDETLVhs  125 (224)
                      +.+++|+||||+.+
T Consensus         4 k~viFD~DGTL~ds   17 (207)
T d2hdoa1           4 QALMFDIDGTLTNS   17 (207)
T ss_dssp             SEEEECSBTTTEEC
T ss_pred             cEEEEeCCCCcCcC
Confidence            67899999999975

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=80.33  E-value=0.26  Score=36.88  Aligned_cols=53  Identities=13%  Similarity=0.110  Sum_probs=45.6

Q ss_pred             EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383          169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST  221 (224)
Q Consensus       169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC  221 (224)
                      ....|++.++|+.+. +.+-+.+.|++...+++.+++......+|+..++-+++
T Consensus        92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~  145 (220)
T d1zrna_          92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPV  145 (220)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGG
T ss_pred             ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeee
Confidence            456899999999996 66899999999999999999998888888888776554