Citrus Sinensis ID: 027391

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220----
Protein Sequence
MGLCQYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLSRLGADEKGFRCSI
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccccccccccccccEEEccccccccccccccEEEEEccccccccccccEEEEEEccccccccccccHHHHHcccccccHHHHHccEEEEEEEEEEEcccccccEEEEEEcccccccEEEEEEEEEcccccEEEEEEEEccccccEEccccccccccccccccccccEEEEEcccccEEEc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccccccccccccccccccccHHHHHHHccccccccEEEEEEccccccccccEEEEEEccccccccccccccccccccHHHHHHHHHHHcccEEEEEEEEcccccccEEEEEEcccccccEEEEEEEEEccccccEEEEEEEcccccccEEcccccccccccccEEcccccEEEEEccccEEEcc
Coil and Loop (DISEMBL)
MGLCQYYLLSVVMLLPAlcysqysftnsratyygspdglgtptgacgfggygrnvndaNVAGVSRlwnngagcgtcyqvrctvpeictdegvsvvvtdygegddtdfilspraygrmavadkseelyshgvvdvefervpcrfrgynVMFKvhensrypqYLAVSMLYVSGQNDVLAVEIWQVITYKLTskqlifgpsiacnafvgaeglsrlgadekgfrcsi
Flexible Loop (DISEMBL)
MGLCQYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEelyshgvvdvefervpCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGlsrlgadekgfrcsi
Low Complexity Region (SEG)
MGLCQYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLSRLGADEKGFRCSI
Disordered region (IsUnstruct)
**LCQYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLSR************
Disordered Region (DISOPRED)
*GLCQYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLSR************
Disordered Region (DISEMBL)
MGLCQYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLSRLGADEKGFRCSI
Disordered Region (DISPRO)
MGLCQYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLSRLGADEKGF****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGLCQYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLSRLGADEKGFRCSI
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	224	2.2.26 [Sep-21-2011]
O23547	250	Expansin-like B1 OS=Arabi	yes	no	0.839	0.752	0.573	3e-60
Q850K7	256	Expansin-like B1 OS=Oryza	yes	no	0.785	0.687	0.410	6e-36
Q9LZT4	265	Expansin-like A1 OS=Arabi	no	no	0.549	0.464	0.392	2e-25
Q10S70	279	Expansin-like A1 OS=Oryza	yes	no	0.75	0.602	0.380	3e-25
Q9SVE5	265	Expansin-like A2 OS=Arabi	no	no	0.549	0.464	0.408	9e-25
Q9LZT5	263	Expansin-like A3 OS=Arabi	no	no	0.535	0.456	0.418	2e-24
Q7XT39	275	Expansin-B5 OS=Oryza sati	no	no	0.696	0.567	0.393	1e-23
Q7XT40	264	Expansin-B15 OS=Oryza sat	no	no	0.803	0.681	0.340	2e-23
Q9LD07	327	Expansin-B7 OS=Oryza sati	no	no	0.674	0.461	0.369	4e-22
Q94LR4	286	Expansin-B4 OS=Oryza sati	no	no	0.714	0.559	0.373	5e-22

>sp|O23547|EXLB1_ARATH Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2

 Score =  231 bits (589), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 109/190 (57%), Positives = 139/190 (73%), Gaps = 2/190 (1%)

Query: 8   LLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS-RL 66
            + V++LLP LC S   F NSRATYYGSPD    P G CG+G +GR++N+  V+GVS RL
Sbjct: 11  FVQVIVLLPLLCLSD-DFVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRL 69

Query: 67  WNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEEL 126
           WNNG GCG CYQVRC +P  C++EGV VV TD GEGD TDFILSP+AYGRMA      +L
Sbjct: 70  WNNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQL 129

Query: 127 YSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITY 186
           YS GVV+VE++R+PCR+ GYN+++K+HE S  P YLA+ +LYV G ND+LAVE+WQ    
Sbjct: 130 YSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCK 189

Query: 187 KLTSKQLIFG 196
           +    + +FG
Sbjct: 190 EWRRMRRVFG 199

Arabidopsis thaliana (taxid: 3702)

>sp|Q850K7|EXLB1_ORYSJ Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2

 Score =  150 bits (379), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 2/178 (1%)

Query: 8   LLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLW 67
           +LS+++ L +   +  +FT SRA YY + D  GT  GAC +G +G  +N+ +V+  + L+
Sbjct: 12  ILSLILFL-SKATADANFTVSRAAYYPNSDIKGTENGACEYGAFGATLNNGDVSASASLY 70

Query: 68  NNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVA-DKSEEL 126
            +G GCG CYQVRCT P  C+  GV++V+TD G  D TDFILS  A+ RMA + D    L
Sbjct: 71  RDGVGCGACYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTDAGTAL 130

Query: 127 YSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVI 184
            + GVV +E+ RV C +   N++FK+ E+S +P YL   + Y  G  D++AV++ + +
Sbjct: 131 LTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETV 188

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LZT4|EXLA1_ARATH Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1

 Score =  115 bits (288), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 82/125 (65%), Gaps = 2/125 (1%)

Query: 61  AGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMA-- 118
           A +  ++ +GAGCG C+QVRC  P++C+ +G  V++TD  + + TD +LS RA+  MA  
Sbjct: 60  AAIPSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKP 119

Query: 119 VADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAV 178
           +    ++L   G+VD+E++RVPC +   N+  +V E S+ P YL + +LY  GQ +V+++
Sbjct: 120 IVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSI 179

Query: 179 EIWQV 183
           +I QV
Sbjct: 180 DIAQV 184

Arabidopsis thaliana (taxid: 3702)

>sp|Q10S70|EXLA1_ORYSJ Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1

 Score =  115 bits (287), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 94/176 (53%), Gaps = 8/176 (4%)

Query: 27  NSRATYYGSPDGLGTPTGACGFGGYGRNVNDAN--VAGVSRLWNNGAGCGTCYQVRCTVP 84
            SRA YY S   L    G+CG+G      N      A    L+  G GCG CYQVRC   
Sbjct: 42  RSRAAYYTS--SLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDK 99

Query: 85  EICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFR 144
           ++C++ G  VVVTD    + T  +LS  A+  MA    +  L     VDVE++RVPC +R
Sbjct: 100 KLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYR 159

Query: 145 GYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQV--ITYKLTSKQLIFGPS 198
             ++  +V E SR P  L +S LY  GQ D++AV++ QV   ++K  +++   GPS
Sbjct: 160 HRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTRE--HGPS 213

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SVE5|EXLA2_ARATH Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1

 Score =  113 bits (283), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 80/125 (64%), Gaps = 2/125 (1%)

Query: 61  AGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMA-- 118
           A +  ++ +G+GCG C+QVRC  P +C+ +G +V+VTD  + + TD +LS RA+  MA  
Sbjct: 61  AALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKP 120

Query: 119 VADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAV 178
           V     +L   G+VD+E+ RVPC +    +  +V E+S+ P YLA+ +LY  GQ +V+A+
Sbjct: 121 VVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAI 180

Query: 179 EIWQV 183
            I QV
Sbjct: 181 YIAQV 185

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZT5|EXLA3_ARATH Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1

 Score =  112 bits (280), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 2/122 (1%)

Query: 61  AGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMA-- 118
           A +  ++ +GAGCG C+QVRC  P++C  +G  V+VTD    + TD +LS RA+  MA  
Sbjct: 60  AAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKP 119

Query: 119 VADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAV 178
           V    + L   G+VDVE++RVPC +   N+  +V E S+ P YLA+ +LY  GQ +V+ +
Sbjct: 120 VVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGI 179

Query: 179 EI 180
           +I
Sbjct: 180 DI 181

Arabidopsis thaliana (taxid: 3702)

>sp|Q7XT39|EXPB5_ORYSJ Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2

 Score =  109 bits (273), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 92/165 (55%), Gaps = 9/165 (5%)

Query: 23  YSFTNSRATYYGSPDGLGTPTGACGFGGY--GRNVNDANVAGVSRLWNNGAGCGTCYQVR 80
           Y +++  AT+YG P G G+  GACG+      R  +    AG   L+ NG GCG+CYQ++
Sbjct: 43  YGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIK 102

Query: 81  CTVPEICTDEGVSVVVTDYGEG-----DDTDFILSPRAYGRMAVADKSEELYSHGVVDVE 135
           CT    C+   V+VV+TD   G     +   F +S  A+G MA     + L S GV+ ++
Sbjct: 103 CTGNRACSGRPVTVVITDSCPGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQ 162

Query: 136 FERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEI 180
           ++RVPCRF   NV FKV   S  P YLA+ + Y +G  D+ AV I
Sbjct: 163 YKRVPCRF-AMNVAFKVDAGSN-PYYLAILVQYANGDGDLAAVHI 205

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XT40|EXB15_ORYSJ Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2

 Score =  108 bits (271), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 14/194 (7%)

Query: 3   LCQYYLLSVVMLLPALCYS------QYSFTNSRATYYGSPDGLGTPTGACGFGG--YGRN 54
           L  + +++ V +LP  C S        S++N  AT+YG+ +G G+  GACG+ G  +   
Sbjct: 9   LSTFVVIAAVTMLPRPCASIEFHRKLSSWSNGGATWYGAANGAGSDGGACGYQGAVFQAP 68

Query: 55  VNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEG-----DDTDFIL 109
            +    AG   ++ +G GCG+CYQV+CT    C+   V+VV+TD   G     +   F L
Sbjct: 69  FSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVTVVLTDECPGGPCLSEPVHFDL 128

Query: 110 SPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYV 169
           S  A+G MA   ++++L + GV+ +++ RVPC + G  + F V   S  P Y AV + Y 
Sbjct: 129 SGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVKLTFVVDVGSN-PNYFAVLVKYE 187

Query: 170 SGQNDVLAVEIWQV 183
           +G  D+  VE+ Q 
Sbjct: 188 NGDGDLSGVELMQT 201

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LD07|EXPB7_ORYSJ Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1

 Score =  104 bits (260), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 97/165 (58%), Gaps = 14/165 (8%)

Query: 25  FTNSRATYYGSPDGLGTPT--GACGFGGYGRNVNDANVAGVSR-----LWNNGAGCGTCY 77
           + N+RAT+YG+P+G G     GACGF    +NVN    + ++      L+ +G GCG+CY
Sbjct: 92  WLNARATWYGAPNGAGPDDNGGACGF----KNVNLPPFSAMTSCGNEPLFKDGKGCGSCY 147

Query: 78  QVRCTVPEICTDEGVSVVVTD--YGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVE 135
           Q+RC     C+    +V++TD  Y       F LS  A+G MA  ++++EL   G++D++
Sbjct: 148 QIRCVGHPACSGLPETVIITDMNYYPVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQ 207

Query: 136 FERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEI 180
           F RVPC++ G  V F V + S  P Y+A+ + Y +G  DV+ V++
Sbjct: 208 FRRVPCQYPGLTVTFHVEQGSN-PVYMAILVEYENGDGDVVQVDL 251

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q94LR4|EXPB4_ORYSJ Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1

 Score =  104 bits (260), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 6/166 (3%)

Query: 25  FTNSRATYYGSPDGLGTPT--GACGFGGYGR-NVNDANVAGVSRLWNNGAGCGTCYQVRC 81
           +T +RAT+YG P+G G     GACGF    +         G   L+ +G GCG+CY++RC
Sbjct: 55  WTKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRC 114

Query: 82  TVPEICTDEGVSVVVTD--YGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERV 139
           T  + C+    +V++TD  Y       F LS  A+GR+A    +++L   G++D+EF RV
Sbjct: 115 TKDQSCSGRSETVIITDMNYYPVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 174

Query: 140 PCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVIT 185
           PC F G  + F V E S  P Y AV + Y  G  DV+ V++ +  T
Sbjct: 175 PCEFPGLKIGFHVEEYSN-PVYFAVLVEYEDGDGDVVQVDLMESKT 219

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	224
255580799	247	Major pollen allergen Ory s 1 precursor,	0.808	0.732	0.688	3e-68
224126451	236	hypothetical protein POPTRDRAFT_783792 [	0.758	0.720	0.713	2e-67
224138720	251	hypothetical protein POPTRDRAFT_589918 [	0.758	0.677	0.695	7e-65
255580801	248	Major pollen allergen Ory s 1 precursor,	0.785	0.709	0.657	2e-63
356563391	251	PREDICTED: expansin-like B1-like [Glycin	0.843	0.752	0.631	1e-62
356497093	251	PREDICTED: expansin-like B1-like [Glycin	0.857	0.764	0.611	4e-62
356540563	251	PREDICTED: expansin-like B1-like [Glycin	0.857	0.764	0.601	7e-60
255648115	183	unknown [Glycine max]	0.781	0.956	0.647	1e-59
388493184	252	unknown [Medicago truncatula]	0.857	0.761	0.559	2e-59
357482205	251	Expansin-like protein [Medicago truncatu	0.857	0.764	0.559	2e-59

>gi|255580799|ref|XP_002531220.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis] gi|223529180|gb|EEF31156.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 126/183 (68%), Positives = 152/183 (83%), Gaps = 2/183 (1%)

Query: 1   MGLCQ-YYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDAN 59
           MGL   Y +  +V+LLPA+ YSQ  FT SRATYYGSPD LGTPTGACGFG YGR VNDAN
Sbjct: 1   MGLIYGYCMFCLVVLLPAIAYSQ-DFTGSRATYYGSPDCLGTPTGACGFGEYGRTVNDAN 59

Query: 60  VAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAV 119
           VAGVSRL+ NG GCG CYQVRC  P+IC+D+GV+VVVTDYGEGD TDFILS RAY R+A 
Sbjct: 60  VAGVSRLYKNGTGCGGCYQVRCKAPQICSDDGVNVVVTDYGEGDKTDFILSSRAYARLAR 119

Query: 120 ADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVE 179
            + + EL+++GVVD+E+ R+ CR+ GYNVMFKVHE+SR+P+YLA+ +LY  GQND+LAV+
Sbjct: 120 PNMAAELFAYGVVDIEYRRISCRYAGYNVMFKVHEHSRFPEYLAIVVLYQGGQNDILAVQ 179

Query: 180 IWQ 182
           IWQ
Sbjct: 180 IWQ 182

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126451|ref|XP_002329557.1| hypothetical protein POPTRDRAFT_783792 [Populus trichocarpa] gi|222870266|gb|EEF07397.1| hypothetical protein POPTRDRAFT_783792 [Populus trichocarpa]

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 122/171 (71%), Positives = 145/171 (84%), Gaps = 1/171 (0%)

Query: 12  VMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGA 71
           + LLPA+ YSQ  +T SRATYYGSPD LGTP+GACGFG YGR VNDANVAGVSRL+ NG 
Sbjct: 1   MALLPAISYSQ-DYTFSRATYYGSPDCLGTPSGACGFGEYGRTVNDANVAGVSRLYKNGT 59

Query: 72  GCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGV 131
           GCG CYQVRC  P +CTD+GV+VVVTDYGEGD TDFILSPRAY RMA  + + EL ++GV
Sbjct: 60  GCGGCYQVRCKAPNLCTDDGVNVVVTDYGEGDKTDFILSPRAYARMAHPNMAVELIAYGV 119

Query: 132 VDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQ 182
           VDVEF R+PCR+ GYN+MFKVHE+SR+P YLA+ +LY +GQN++LAVE+WQ
Sbjct: 120 VDVEFRRIPCRYSGYNLMFKVHEHSRFPDYLAIILLYQAGQNEILAVELWQ 170

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138720|ref|XP_002326673.1| hypothetical protein POPTRDRAFT_589918 [Populus trichocarpa] gi|222833995|gb|EEE72472.1| hypothetical protein POPTRDRAFT_589918 [Populus trichocarpa]

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 119/171 (69%), Positives = 145/171 (84%), Gaps = 1/171 (0%)

Query: 12  VMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGA 71
           V LLPA+ +SQ  +T SRATY+GSPD LGTPTGACGFGGYGR VNDANVAGVSRL+ NG 
Sbjct: 17  VALLPAISHSQ-DYTCSRATYFGSPDCLGTPTGACGFGGYGRTVNDANVAGVSRLFKNGT 75

Query: 72  GCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGV 131
           GCG CYQVRC    +C+D+GV+VVVTDYGEGD TDFILS RAY RMA  + + EL+++GV
Sbjct: 76  GCGGCYQVRCKASNLCSDDGVNVVVTDYGEGDKTDFILSTRAYARMARPNMALELFAYGV 135

Query: 132 VDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQ 182
           VDVEF R+PCR+ GYN+MFKVHE+SR+P+YLA+ +LY +GQN++LAVE+ Q
Sbjct: 136 VDVEFRRIPCRYNGYNLMFKVHEHSRFPEYLAIVLLYQAGQNEILAVELRQ 186

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580801|ref|XP_002531221.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis] gi|223529181|gb|EEF31157.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 117/178 (65%), Positives = 146/178 (82%), Gaps = 2/178 (1%)

Query: 6   YYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSR 65
           Y +  +++LLP + YSQ  FT+SRATYYGSPD LGTPTGACGFG YGR VN+ANVAGVSR
Sbjct: 9   YCMFCLMVLLPPITYSQ-DFTSSRATYYGSPDRLGTPTGACGFGEYGRTVNNANVAGVSR 67

Query: 66  LWNNGAGCGTCYQVRCTVPE-ICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSE 124
           L+ NG GCG CYQVRC  P  IC D+GV+VVVTDYGEGD TDFILS RAY R+A  + + 
Sbjct: 68  LYRNGTGCGGCYQVRCKAPHGICNDDGVNVVVTDYGEGDKTDFILSSRAYARLARPNMAA 127

Query: 125 ELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQ 182
           EL+++GVVDV++ R+ CR+ GYN++FK+HE SR+P+YLA+ +LY  GQND+LAV+IWQ
Sbjct: 128 ELFAYGVVDVQYRRISCRYAGYNLIFKIHEYSRFPEYLAIVVLYQGGQNDILAVQIWQ 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563391|ref|XP_003549947.1| PREDICTED: expansin-like B1-like [Glycine max]

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 120/190 (63%), Positives = 141/190 (74%), Gaps = 1/190 (0%)

Query: 8   LLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLW 67
           L  VV+LLPALC SQ SFT+SRATYYGSPD  G P GACGFG YGR VND +VAGVSRLW
Sbjct: 11  LACVVLLLPALCSSQDSFTDSRATYYGSPDCYGNPRGACGFGEYGRTVNDGSVAGVSRLW 70

Query: 68  NNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAV-ADKSEEL 126
            NG+GCG CYQ RC +P+ C + G  VVVTDYGEGD TDFI+SPRAY R+   AD S EL
Sbjct: 71  RNGSGCGACYQARCKIPQYCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGRNADASAEL 130

Query: 127 YSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITY 186
           + +GVVD+E+ RVPC + GYNV+FKVHE+SR P Y AV +LYV G  DV AVE++Q    
Sbjct: 131 FKYGVVDIEYRRVPCSYTGYNVVFKVHEHSRNPDYFAVVVLYVDGTYDVTAVELFQQDCQ 190

Query: 187 KLTSKQLIFG 196
           +    +  FG
Sbjct: 191 EWKPMRRAFG 200

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497093|ref|XP_003517398.1| PREDICTED: expansin-like B1-like [Glycine max]

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 118/193 (61%), Positives = 141/193 (73%), Gaps = 1/193 (0%)

Query: 5   QYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS 64
           Q  L  V +LLPALC SQ SFT SRATYYGSPD  G P GACGFG YG+ VND +VAGVS
Sbjct: 8   QLSLFCVTLLLPALCTSQDSFTCSRATYYGSPDCYGNPRGACGFGEYGKTVNDGSVAGVS 67

Query: 65  RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAV-ADKS 123
            LW NG+GCG CYQVRC +P+ C + G  VVVTDYGEGD TDFI+SPRAY R+   AD S
Sbjct: 68  WLWKNGSGCGACYQVRCKIPQFCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGRNADAS 127

Query: 124 EELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQV 183
            EL+ +GV+DVE+ RVPCR+ GYN++ KVHE+SR P YLA+ +LY+ G  DV AVE+WQ 
Sbjct: 128 AELFKYGVMDVEYRRVPCRYGGYNLLVKVHEHSRNPHYLAIVILYLGGTYDVTAVELWQE 187

Query: 184 ITYKLTSKQLIFG 196
              +    +  FG
Sbjct: 188 DCQEWRRMRRAFG 200

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540563|ref|XP_003538757.1| PREDICTED: expansin-like B1-like [Glycine max]

 Score =  236 bits (601), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 116/193 (60%), Positives = 140/193 (72%), Gaps = 1/193 (0%)

Query: 5   QYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS 64
           Q  ++ V +LLPAL  SQ SFT SRATYYGS D  G P GACGFG YG+ VND +VAGVS
Sbjct: 8   QLSIICVTLLLPALRTSQDSFTCSRATYYGSTDCYGNPRGACGFGEYGKTVNDGSVAGVS 67

Query: 65  RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRM-AVADKS 123
            LW NG+GCG CYQVRC +P+ C + G  VVVTDYGEGD TDFI+SPRAY R+ + AD S
Sbjct: 68  WLWKNGSGCGACYQVRCKIPQFCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGSNADAS 127

Query: 124 EELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQV 183
            EL+ +GVVDVE+ RVPCR+ GYN++ KVHE SR P YLA+ +LY+ G  DV AVE+WQ 
Sbjct: 128 AELFKYGVVDVEYRRVPCRYGGYNLLVKVHEQSRNPHYLAIVILYLGGTYDVTAVELWQE 187

Query: 184 ITYKLTSKQLIFG 196
              +    +  FG
Sbjct: 188 DCQEWRRMRRAFG 200

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255648115|gb|ACU24512.1| unknown [Glycine max]

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/176 (64%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 5   QYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS 64
           Q  L  V +LLPALC SQ SFT SRATYYGSPD  G P GACGFG YG+ VND +VAGVS
Sbjct: 8   QLSLFCVTLLLPALCTSQDSFTCSRATYYGSPDCYGNPRGACGFGEYGKTVNDGSVAGVS 67

Query: 65  RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAV-ADKS 123
            LW NG+GCG CYQVRC +P+ C + G  VVVTDYGEGD TDFI+SPRAY R+   AD S
Sbjct: 68  WLWKNGSGCGACYQVRCKIPQFCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGRNADAS 127

Query: 124 EELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVE 179
            EL+ +GV+DVE+ RVPCR+ GYN++ KVHE+SR P YLA+ +LY+ G  DV AVE
Sbjct: 128 AELFKYGVMDVEYRRVPCRYGGYNLLVKVHEHSRNPHYLAIVILYLGGTYDVTAVE 183

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493184|gb|AFK34658.1| unknown [Medicago truncatula]

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 108/193 (55%), Positives = 138/193 (71%), Gaps = 1/193 (0%)

Query: 5   QYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS 64
           Q   + V++ LP LC SQ SF  SRATYYGSPD    P GACG+G YG+ VND NVAGVS
Sbjct: 9   QIGFICVMLFLPVLCSSQDSFVCSRATYYGSPDCYANPKGACGYGDYGQTVNDGNVAGVS 68

Query: 65  RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAV-ADKS 123
            LW NG+GCG CYQVRC +PE+C + G  VVVTD+G GD TDFI+SPR Y ++    D S
Sbjct: 69  WLWKNGSGCGACYQVRCKIPELCDENGAYVVVTDFGVGDRTDFIMSPRGYSKLGKNGDAS 128

Query: 124 EELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQV 183
            EL+ +GVVD+E++R+PC++ GYN++FKVHE S+ P YLA+ +LYV G NDV AV++WQ 
Sbjct: 129 AELFKYGVVDIEYKRIPCKYNGYNILFKVHERSKNPHYLAILILYVGGTNDVTAVQLWQE 188

Query: 184 ITYKLTSKQLIFG 196
              +    +  FG
Sbjct: 189 DCKEWRPMRRAFG 201

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357482205|ref|XP_003611388.1| Expansin-like protein [Medicago truncatula] gi|355512723|gb|AES94346.1| Expansin-like protein [Medicago truncatula]

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 108/193 (55%), Positives = 138/193 (71%), Gaps = 1/193 (0%)

Query: 5   QYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS 64
           Q   + V++ LP LC SQ SF  SRATYYGSPD    P GACG+G YG+ VND NVAGVS
Sbjct: 8   QIGFICVMLFLPVLCSSQDSFVCSRATYYGSPDCYANPKGACGYGDYGQTVNDGNVAGVS 67

Query: 65  RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAV-ADKS 123
            LW NG+GCG CYQVRC +PE+C + G  VVVTD+G GD TDFI+SPR Y ++    D S
Sbjct: 68  WLWKNGSGCGACYQVRCKIPELCDENGAYVVVTDFGVGDRTDFIMSPRGYSKLGKNGDAS 127

Query: 124 EELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQV 183
            EL+ +GVVD+E++R+PC++ GYN++FKVHE S+ P YLA+ +LYV G NDV AV++WQ 
Sbjct: 128 AELFKYGVVDIEYKRIPCKYNGYNILFKVHERSKNPHYLAILILYVGGTNDVTAVQLWQE 187

Query: 184 ITYKLTSKQLIFG 196
              +    +  FG
Sbjct: 188 DCKEWRPMRRAFG 200

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	224
TAIR|locus:2130444	250	EXLB1 "expansin-like B1" [Arab	0.834	0.748	0.576	4.5e-59
TAIR|locus:2121803	265	EXLA2 "expansin-like A2" [Arab	0.781	0.660	0.364	1e-29
TAIR|locus:2077177	265	EXLA1 "expansin-like A1" [Arab	0.687	0.581	0.364	9.1e-29
TAIR|locus:2077167	263	EXLA3 "expansin-like A3" [Arab	0.767	0.653	0.359	1.9e-28
TAIR|locus:2123643	264	EXPB3 "expansin B3" [Arabidops	0.674	0.571	0.383	2.3e-23
TAIR|locus:2018521	273	EXPB2 "expansin B2" [Arabidops	0.718	0.589	0.337	7e-22
TAIR|locus:2055594	259	EXPB4 "expansin B4" [Arabidops	0.781	0.675	0.336	1.5e-21
TAIR|locus:2051338	271	EXPB1 "expansin B1" [Arabidops	0.857	0.708	0.314	1e-20
TAIR|locus:4515102723	223	EXPB6 "AT1G65681" [Arabidopsis	0.633	0.636	0.324	4.1e-17
TAIR|locus:2040686	262	EXP3 [Arabidopsis thaliana (ta	0.718	0.614	0.327	8.6e-17

TAIR|locus:2130444 EXLB1 "expansin-like B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
 Identities = 109/189 (57%), Positives = 139/189 (73%)

Query:     9 LSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS-RLW 67
             + V++LLP LC S   F NSRATYYGSPD    P G CG+G +GR++N+  V+GVS RLW
Sbjct:    12 VQVIVLLPLLCLSD-DFVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLW 70

Query:    68 NNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELY 127
             NNG GCG CYQVRC +P  C++EGV VV TD GEGD TDFILSP+AYGRMA      +LY
Sbjct:    71 NNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQLY 130

Query:   128 SHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYK 187
             S GVV+VE++R+PCR+ GYN+++K+HE S  P YLA+ +LYV G ND+LAVE+WQ    +
Sbjct:   131 SFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKE 190

Query:   188 LTSKQLIFG 196
                 + +FG
Sbjct:   191 WRRMRRVFG 199

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS

GO:0009828 "plant-type cell wall loosening" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2121803 EXLA2 "expansin-like A2" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 66/181 (36%), Positives = 106/181 (58%)

Query:     7 YLLSVVMLLPALCYS-QYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAG-VS 64
             +LLSVV+L  +   +      +S+A Y+ S   L +  GAC +G         ++A  + 
Sbjct:     7 FLLSVVLLFSSSAAACDRCLHSSKAAYFSSASALSS--GACAYGSMATGFFAGHIAAALP 64

Query:    65 RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMA--VADK 122
              ++ +G+GCG C+QVRC  P +C+ +G +V+VTD  + + TD +LS RA+  MA  V   
Sbjct:    65 SIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGA 124

Query:   123 SEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQ 182
               +L   G+VD+E+ RVPC +    +  +V E+S+ P YLA+ +LY  GQ +V+A+ I Q
Sbjct:   125 DRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQ 184

Query:   183 V 183
             V
Sbjct:   185 V 185

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

TAIR|locus:2077177 EXLA1 "expansin-like A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 58/159 (36%), Positives = 98/159 (61%)

Query:    28 SRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAG-VSRLWNNGAGCGTCYQVRCTVPEI 86
             S+A Y+ S   L +  GAC +G    +    ++A  +  ++ +GAGCG C+QVRC  P++
Sbjct:    28 SKAAYFSSASALSS--GACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKL 85

Query:    87 CTDEGVSVVVTDYGEGDDTDFILSPRAYGRMA--VADKSEELYSHGVVDVEFERVPCRFR 144
             C+ +G  V++TD  + + TD +LS RA+  MA  +    ++L   G+VD+E++RVPC + 
Sbjct:    86 CSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYG 145

Query:   145 GYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQV 183
               N+  +V E S+ P YL + +LY  GQ +V++++I QV
Sbjct:   146 NKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQV 184

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2077167 EXLA3 "expansin-like A3" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 64/178 (35%), Positives = 102/178 (57%)

Query:     7 YLLSVVMLLPALCYS-QYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAG-VS 64
             YL+ V+ L  +   +       S+A+Y+ S   L +  GAC +G    +    ++A  + 
Sbjct:     6 YLIVVIFLFSSSVNACDRCLHRSKASYFSSASALSS--GACAYGPMATSFFAGHIAAAIP 63

Query:    65 RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMA--VADK 122
              ++ +GAGCG C+QVRC  P++C  +G  V+VTD    + TD +LS RA+  MA  V   
Sbjct:    64 SIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGV 123

Query:   123 SEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEI 180
              + L   G+VDVE++RVPC +   N+  +V E S+ P YLA+ +LY  GQ +V+ ++I
Sbjct:   124 DKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDI 181

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2123643 EXPB3 "expansin B3" [Arabidopsis thaliana (taxid:3702)]

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 61/159 (38%), Positives = 94/159 (59%)

Query:    30 ATYYGSPDGLGTPTGACGFGGYGRNVND--ANVAGVSR-LWNNGAGCGTCYQVRCTVPEI 86
             AT+YGSP+G G+  GACG+G    +V    A V  V+  L+ NG GCG CY+VRC    I
Sbjct:    41 ATWYGSPNGDGSDGGACGYGTLV-DVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSI 99

Query:    87 CTDEGVSVVVTDYGEG---DDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRF 143
             C+   V+V++TD   G     T F LS   +GR+A+A +S  L + G++ V + R  C++
Sbjct:   100 CSRRAVTVIITDECPGCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 159

Query:   144 RGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQ 182
             RG N+ F V+E S    +L++ + +  G+ D+ ++ I Q
Sbjct:   160 RGKNIAFHVNEGST-DFWLSLLVEFEDGEGDIGSMHIRQ 197

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0019953 "sexual reproduction" evidence=IEA

GO:0006949 "syncytium formation" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2018521 EXPB2 "expansin B2" [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 57/169 (33%), Positives = 93/169 (55%)

Query:    21 SQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANV--AGVSRLWNNGAGCGTCYQ 78
             S +S   S  T+YG+P G G+  GACG+G        + +  AG   L+ +G GCG CYQ
Sbjct:    45 SDWSIAGS--TWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQ 102

Query:    79 VRCTVPEICTDEGVSVVVTDYGEG---DDTDFILSPRAYGRMAVADKSEELYSHGVVDVE 135
             V+CT    C+   V+VV+TD   G   +   F LS  A+G MA++ +  +L + G + + 
Sbjct:   103 VKCTSKSACSKNPVTVVITDECPGCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQIL 162

Query:   136 FERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVI 184
             +++V C + G  V F+V + S    + AV + YV+G  ++  +E+ Q +
Sbjct:   163 YKKVECNYIGKTVTFQVDKGSNANSF-AVLVAYVNGDGEIGRIELKQAL 210

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2055594 EXPB4 "expansin B4" [Arabidopsis thaliana (taxid:3702)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 64/190 (33%), Positives = 100/190 (52%)

Query:     5 QYY-LLSVVMLLPALCYSQYSFTN------SRATYYGSPDGLGTPTGACGFGGYGRNVN- 56
             +Y+ LL++  +    CY Q    +      +  T+YG P G G+  GACG+G    N   
Sbjct:     6 RYFALLALFAVSLKFCYCQNETIDVAGSGTAGVTWYGEPFGAGSTGGACGYGSAVANPPL 65

Query:    57 DANV-AGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEG-----DDTDFILS 110
              A V AG   L+NNG GCGTCYQV C     C+   ++V +TD   G     +     LS
Sbjct:    66 YAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHIDLS 125

Query:   111 PRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVS 170
              +A G +A   ++++L S GV+ V ++R  C +RG N++F++   +  P Y++  + Y +
Sbjct:   126 GKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGAN-PYYISFVVEYEN 184

Query:   171 GQNDVLAVEI 180
             G  D+  VEI
Sbjct:   185 GDGDLSNVEI 194

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2051338 EXPB1 "expansin B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 66/210 (31%), Positives = 108/210 (51%)

Query:     3 LCQYY--LLSVVMLLPALCYSQYSFTNSR-----ATYYGSPDGLGTPTGACGFGGYGRNV 55
             LC +   L+S     P L +S      +R     AT+YGS +G G+  GACG+G    +V
Sbjct:    11 LCVFLHLLISGSGSTPPLTHSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLV-DV 69

Query:    56 ND--ANVAGVSR-LWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYG------EGDDTD 106
                 A V  VS  L+  G GCG CY+VRC    IC+   V+++ TD        +   T 
Sbjct:    70 KPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTH 129

Query:   107 FILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSM 166
             F LS  A+G MA+   +  + + G++++ + R  C++RG N+ F V+  S    +L++ +
Sbjct:   130 FDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGST-DYWLSLLI 188

Query:   167 LYVSGQNDVLAVEIWQVITYKLTSKQLIFG 196
              Y  G+ D+ ++ I Q  + +  S + I+G
Sbjct:   189 EYEDGEGDIGSMHIRQAGSKEWISMKHIWG 218

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:4515102723 EXPB6 "AT1G65681" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 48/148 (32%), Positives = 76/148 (51%)

Query:    38 GLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVT 97
             G G+  GACGF      +     AG   ++NNG GCGTC+Q+ C     C+   ++V +T
Sbjct:    11 GAGSTGGACGFAVANPPLYGMVSAGGPSVFNNGIGCGTCFQILCNGHPACSRRPITVTIT 70

Query:    98 DYGEG-----DDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKV 152
             D   G     +   F LS +A G +A   + + L S GV+ V + RV C +R  N+ F++
Sbjct:    71 DECPGGPCASEPAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRVECLYRRTNIAFRM 130

Query:   153 HENSRYPQYLAVSMLYVSGQNDVLAVEI 180
                +  P Y++  + Y +G  D+  +EI
Sbjct:   131 DPGAN-PYYISFVVEYENGDGDLAYIEI 157

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2040686 EXP3 [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 58/177 (32%), Positives = 89/177 (50%)

Query:    15 LPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSR-LWNNGAGC 73
             +P + YS   + N+ AT+YG  D  GT  GACG+G         N A +S  L+NNG  C
Sbjct:    27 IPGV-YSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSC 85

Query:    74 GTCYQVRCTV-PEICTDEGVSVVVT-------DYGE-GDDTDFILSPRAYGRMAVADKSE 124
             G C++++CT  P  C     S++VT       ++ +  DD  +   PR +  +A+    +
Sbjct:    86 GACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLK 145

Query:   125 -ELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEI 180
               LY  G+V V + RVPCR  G  + F V+   RY  +  V +  V+G  D+  V +
Sbjct:   146 IGLYRAGIVPVSYRRVPCRKIG-GIRFTVN-GFRY--FNLVLVTNVAGAGDINGVSV 198

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP;RCA

GO:0009739 "response to gibberellin stimulus" evidence=TAS

GO:0010114 "response to red light" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O23547	EXLB1_ARATH	No assigned EC number	0.5736	0.8392	0.752	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: PtrEXLB1 expansin-related protein 1 precursor (236 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	224
PLN03023	247	PLN03023, PLN03023, Expansin-like B1; Provisional	1e-106
PLN00050	247	PLN00050, PLN00050, expansin A; Provisional	8e-15
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	2e-13
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	3e-13
PLN03024	125	PLN03024, PLN03024, Putative EG45-like domain cont	6e-05
smart00837	87	smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like	6e-04

>gnl|CDD|215542 PLN03023, PLN03023, Expansin-like B1; Provisional

 Score =  305 bits (784), Expect = e-106
 Identities = 125/183 (68%), Positives = 147/183 (80%), Gaps = 2/183 (1%)

Query: 1   MGLCQYY-LLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDAN 59
             L  Y   L V++LLP LC SQ  FT SRATYYGSPD LGTPTGACGFG YGR VN  N
Sbjct: 1   FPLSHYCCFLCVIVLLPLLCKSQ-DFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGN 59

Query: 60  VAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAV 119
           VAGVSRL+ NG GCG CYQVRC  P +C+D+GV+VVVTDYGEGD TDFILSPRAY R+A 
Sbjct: 60  VAGVSRLYRNGTGCGACYQVRCKAPNLCSDDGVNVVVTDYGEGDKTDFILSPRAYARLAR 119

Query: 120 ADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVE 179
            + + EL+++GVVDVE+ R+PCR+ GYN+ FKVHE+SR+P YLA+ MLY +GQND+LAVE
Sbjct: 120 PNMAAELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLAIVMLYQAGQNDILAVE 179

Query: 180 IWQ 182
           IWQ
Sbjct: 180 IWQ 182

Length = 247

>gnl|CDD|165628 PLN00050, PLN00050, expansin A; Provisional

 Score = 70.8 bits (173), Expect = 8e-15
 Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 41/211 (19%)

Query: 1   MGLCQYYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFG-----GYGRNV 55
           M    Y +++++ +L  +      +T + AT+YG  D  GT  GACG+G     GYG N 
Sbjct: 1   MECLGYTIVALLSILKIVEGYGSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 60

Query: 56  NDANVAGVSRLWNNGAGCGTCYQVRCTVPEI-CTDEGVSVVVTDYGEGDDT--------- 105
              + A    L+NNG  CG C++++C    I C    + +  T++   +           
Sbjct: 61  AALSTA----LFNNGLSCGACFEIKCVNDNIWCLPGSIIITATNFCPPNLALPNNDGGWC 116

Query: 106 -----DFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQ 160
                 F LS   + ++A        Y  G+V V++ RV CR  G  + F ++ +S +  
Sbjct: 117 NPPQQHFDLSQPVFQKIA-------QYKAGIVPVQYRRVACRKSG-GIRFTINGHSYFNL 168

Query: 161 YLAVSMLYVSGQNDVLAVEI------WQVIT 185
            L  +   V G  D++AV I      WQ ++
Sbjct: 169 VLITN---VGGAGDIVAVSIKGSKSNWQAMS 196

Length = 247

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score = 67.2 bits (164), Expect = 2e-13
 Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 22/144 (15%)

Query: 19  CYSQYSFTNSRATYYGSPDGLGTPTGACGFG-----GYGRNVNDANVAGVSRLWNNGAGC 73
            ++   +T + AT+YG  D  GT  GACG+G     GYG      + A    L+N+GA C
Sbjct: 24  AFTPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTA----LFNDGASC 79

Query: 74  GTCYQVRC---TVPEICTDEGVSVVVT-------DYG-EGDDTDFILSPRAYGRMAV-AD 121
           G CY++ C        C  +G SV +T       +Y    ++  +   P  +  MA  A 
Sbjct: 80  GQCYRIMCDYQADSRWCI-KGASVTITATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAW 138

Query: 122 KSEELYSHGVVDVEFERVPCRFRG 145
           +   +Y  G+V V F+RVPC+  G
Sbjct: 139 EKIGIYRGGIVPVLFQRVPCKKHG 162

Length = 256

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 13/83 (15%)

Query: 60  VAGVSRLWNNGAGCGTCYQVRCTVPEICTD-----EGVSVVVTDYG-EGDDTDFILSPRA 113
            AG + L+N+G  CG CYQV+C      T        V+V +TD         F LS  A
Sbjct: 2   AAGSASLYNDGTACGECYQVKCLTAAHPTGTCRVLRSVTVTITDRCPFPPRRHFDLSGPA 61

Query: 114 YGRMAVADKSEELYSHGVVDVEF 136
           +  +A           G+V VE+
Sbjct: 62  FEALA-------KPRAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|178595 PLN03024, PLN03024, Putative EG45-like domain containing protein 1; Provisional

 Score = 41.2 bits (96), Expect = 6e-05
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 14/95 (14%)

Query: 30  ATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCT-----VP 84
           AT+Y S     TP+ AC + G    V  A  A    LWNNG  CG  + V+C      VP
Sbjct: 26  ATFYTSY----TPS-AC-YRGTSFGVMIA--AASDSLWNNGRVCGKMFTVKCKGPRNAVP 77

Query: 85  EICTDEGVSVVVTDY-GEGDDTDFILSPRAYGRMA 118
             CT + V+V + D+   G  +   LS  A+ ++A
Sbjct: 78  HPCTGKSVTVKIVDHCPSGCASTLDLSREAFAQIA 112

Length = 125

>gnl|CDD|129070 smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 37.4 bits (87), Expect = 6e-04
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 66 LWNNGAGCGTCYQVRCT-VPEICTDEGVSVVVT 97
          L+NNGA CG CY++ C   P+ C   G S+ VT
Sbjct: 8  LFNNGASCGACYEIMCVDSPKWCK-PGGSITVT 39

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	224
PLN03023	247	Expansin-like B1; Provisional	100.0
PLN00050	247	expansin A; Provisional	100.0
PLN00193	256	expansin-A; Provisional	100.0
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.96
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.93
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.87
PF01357	82	Pollen_allerg_1: Pollen allergen; InterPro: IPR007	99.81
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.79
PLN00115	118	pollen allergen group 3; Provisional	99.5
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	98.98
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	98.38
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	98.07
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	97.82
PRK10672	361	rare lipoprotein A; Provisional	97.31
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	91.8

>PLN03023 Expansin-like B1; Provisional

Probab=100.00  E-value=6.4e-62  Score=425.00  Aligned_cols=209  Identities=60%  Similarity=1.084  Sum_probs=191.4

Q ss_pred             HHHHHHHHHhhhhhccCCCeeeeEEEEeCCCCCCCCCCCccCCCCCCCCCCCceEEEeccccCCCCCCCceEEEEeCCCC
Q 027391            6 YYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPE   85 (224)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~g~aT~Yg~~~g~g~~~GACGy~~~~~~~~~~~vaAls~~~~~G~~CG~C~eV~c~~~~   85 (224)
                      ++||+++++++....++ +|++++|||||++++.|+++|||||+++..+.++.++||+|+||++|++||+||||+|.+++
T Consensus         7 ~~~~~~~~~~~~~~~~~-~W~~a~AT~Yg~~~g~gt~gGACGYg~~~~~~~g~~~aa~s~Lf~~G~~CGaCy~irC~~~~   85 (247)
T PLN03023          7 CCFLCVIVLLPLLCKSQ-DFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVSRLYRNGTGCGACYQVRCKAPN   85 (247)
T ss_pred             HHHHHHHHHhhhhhhcC-CcccceEEEeCCCCCCCCCCccccCCccccCCCcceeeeehhhhcCCchhcccEEeecCCCC
Confidence            56666677777755555 59999999999999999999999999988888899999999999999999999999999999


Q ss_pred             cccCCcEEEEEecCCCCCCCCeeeCHHHHHhhhccccccccccCceeeeEEEEEecCCCCcceEEEEecCCCCCcEEEEE
Q 027391           86 ICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVS  165 (224)
Q Consensus        86 ~C~~~sv~V~VtD~Cp~~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~~~g~ni~~~v~~gS~~~~w~al~  165 (224)
                      +|++++|+|+|||.||+++.|||||..||.+||+|+++++++++|+|+|+||||||.++|+||+|+|+++|.+|+||+++
T Consensus        86 ~C~~~~v~V~iTd~~~~~~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrRVpC~~~G~~i~F~V~~~s~~p~yl~vl  165 (247)
T PLN03023         86 LCSDDGVNVVVTDYGEGDKTDFILSPRAYARLARPNMAAELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLAIV  165 (247)
T ss_pred             ccCCCCeEEEEEeCCCCCCCccccCHHHHHHHhCccccchhccCcEEEeEEEEEecccCCCceEEEEecCCCCCceEEEE
Confidence            99999999999999999999999999999999999998889999999999999999999999999999999559999999


Q ss_pred             EEEecCCCCcEEEEEEEcCccCcEEcccccCceeeeccccCCc-cce-EEee
Q 027391          166 MLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAE-GLS-RLGA  215 (224)
Q Consensus       166 v~n~~G~g~I~sVev~~~g~~~W~~l~r~~g~~W~~~~~~~~~-~~~-~~~~  215 (224)
                      |.|++|.+||++||||+.++..|++|+|+||++|+++++|.|| +|+ |...
T Consensus       166 v~~vgG~GdI~~V~Ik~~~~~~W~~M~rnwGa~W~~~~~l~Gp~slrf~v~~  217 (247)
T PLN03023        166 MLYQAGQNDILAVEIWQEDCKEWRGMRKAYGAVWDMPNPPKGPITLRFQVSG  217 (247)
T ss_pred             EEEcCCCccEEEEEEEecCCCCceECccCCcceeEcCCCCCCceeEEEEEEe
Confidence            9999999999999999977678999999999999999999887 555 4443

>PLN00050 expansin A; Provisional

Probab=100.00  E-value=8.8e-57  Score=392.93  Aligned_cols=184  Identities=28%  Similarity=0.573  Sum_probs=170.4

Q ss_pred             CCCeeeeEEEEeCCCCCCCCCCCccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeCC-CCcccCCcEEEEEecC
Q 027391           22 QYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS-RLWNNGAGCGTCYQVRCTV-PEICTDEGVSVVVTDY   99 (224)
Q Consensus        22 ~~~~~~g~aT~Yg~~~g~g~~~GACGy~~~~~~~~~~~vaAls-~~~~~G~~CG~C~eV~c~~-~~~C~~~sv~V~VtD~   99 (224)
                      ..+|..++|||||.+++.|+++|||||+++..++++.++||+| ++|++|+.||+||||+|.+ +.+|.+++|+|+|||+
T Consensus        22 ~~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~~~~C~~gsV~V~itd~  101 (247)
T PLN00050         22 GSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDNIWCLPGSIIITATNF  101 (247)
T ss_pred             CCCccccEEEEcCCCCCCCCCCcccCCCCccccCCCceeeeccHhHccCCccccceEEEEcCCCCcccCCCcEEEEEecC
Confidence            4689999999999999999999999999988888999999999 9999999999999999965 3579989999999999


Q ss_pred             CCC--------------CCCCeeeCHHHHHhhhccccccccccCceeeeEEEEEecCCCCcceEEEEecCCCCCcEEEEE
Q 027391          100 GEG--------------DDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVS  165 (224)
Q Consensus       100 Cp~--------------~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~~~g~ni~~~v~~gS~~~~w~al~  165 (224)
                      ||+              ++.|||||+.||.+||.       ++.|+|+|+||||||+++| ||+|+|++++   ||++++
T Consensus       102 CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~-------~~aGii~V~yRRVpC~~~G-~i~f~v~g~s---y~~~vl  170 (247)
T PLN00050        102 CPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQ-------YKAGIVPVQYRRVACRKSG-GIRFTINGHS---YFNLVL  170 (247)
T ss_pred             CCCCcCcCccCCCcCCCCCcccccCHHHHHHHhh-------hcCCeeeeEEEEecCcCCC-CeEEEEcCCc---eeEEEE
Confidence            995              45899999999999994       5889999999999999999 9999998744   999999


Q ss_pred             EEEecCCCCcEEEEEEEcCccCcEEcccccCceeeeccccCCccce-EEeecC
Q 027391          166 MLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLS-RLGADE  217 (224)
Q Consensus       166 v~n~~G~g~I~sVev~~~g~~~W~~l~r~~g~~W~~~~~~~~~~~~-~~~~~~  217 (224)
                      |.|++|.++|++|||+++++ +|++|+|+||++|++++.|.||+|+ |+.+++
T Consensus       171 v~nv~G~gdi~~V~ikg~~~-~W~~M~R~wGa~W~~~~~l~g~~lsfRvt~~~  222 (247)
T PLN00050        171 ITNVGGAGDIVAVSIKGSKS-NWQAMSRNWGQNWQSNSYLNGQALSFKVTTSD  222 (247)
T ss_pred             EEEcCCCccEEEEEEecCCC-CeeECccccCceeEccCCCCCCcEEEEEEecC
Confidence            99999999999999999874 7999999999999999999999999 998755

>PLN00193 expansin-A; Provisional

Probab=100.00  E-value=1.2e-56  Score=393.59  Aligned_cols=185  Identities=28%  Similarity=0.561  Sum_probs=170.2

Q ss_pred             cCCCeeeeEEEEeCCCCCCCCCCCccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeC---CCCcccCC-cEEEE
Q 027391           21 SQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS-RLWNNGAGCGTCYQVRCT---VPEICTDE-GVSVV   95 (224)
Q Consensus        21 ~~~~~~~g~aT~Yg~~~g~g~~~GACGy~~~~~~~~~~~vaAls-~~~~~G~~CG~C~eV~c~---~~~~C~~~-sv~V~   95 (224)
                      ...+|.+++||||+++|+.|+++|||||+++..++++.++||+| ++|++|+.||+||||+|.   ++++|.++ +|+|+
T Consensus        26 ~~~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyev~C~~~~~~~~C~~g~sV~Vt  105 (256)
T PLN00193         26 TPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDYQADSRWCIKGASVTIT  105 (256)
T ss_pred             CCCCceeeEEEEcCCCCCCCCCCcccCCCCccccCCCceeeecCHhHccCCccccCeEEEECCCCCCCccccCCCeEEEE
Confidence            35589999999999999989999999999988888999999999 999999999999999994   56789665 89999


Q ss_pred             EecCCCC--------------CCCCeeeCHHHHHhhhccccccccccCceeeeEEEEEecCCCCcceEEEEecCCCCCcE
Q 027391           96 VTDYGEG--------------DDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQY  161 (224)
Q Consensus        96 VtD~Cp~--------------~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~~~g~ni~~~v~~gS~~~~w  161 (224)
                      |||+||.              ++.|||||+.||.+||.       ++.|+|+|+||||||+++| ||+|+|++   ++||
T Consensus       106 ~td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA~-------~~~Giv~V~yrRVpC~~~G-~i~f~v~g---n~y~  174 (256)
T PLN00193        106 ATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGI-------YRGGIVPVLFQRVPCKKHG-GVRFTING---RDYF  174 (256)
T ss_pred             EecCCCCcccccccCCCcCCCCCcccccCHHHHHHHhh-------hcCCeEeEEEEEeccccCC-CcEEEEcC---CccE
Confidence            9999995              45899999999999994       5799999999999999999 99999984   6899


Q ss_pred             EEEEEEEecCCCCcEEEEEEEcCccCcEEcccccCceeeeccccCCccce-EEeecC
Q 027391          162 LAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLS-RLGADE  217 (224)
Q Consensus       162 ~al~v~n~~G~g~I~sVev~~~g~~~W~~l~r~~g~~W~~~~~~~~~~~~-~~~~~~  217 (224)
                      ++++|.|++|++||++||||++++ .|++|+|+||++|++++.|.||+|+ |+.+++
T Consensus       175 ~~vlv~nv~G~gdV~~v~Ik~~~~-~W~~M~R~wGa~W~~~~~l~g~plsfRvts~~  230 (256)
T PLN00193        175 ELVLISNVGGAGSIQSVSIKGSKT-GWMAMSRNWGANWQSNAYLDGQSLSFKVTTTD  230 (256)
T ss_pred             EEEEEEEeCCCccEEEEEEecCCC-CeeECcccccceeEecCCCCCCCEEEEEEEcC
Confidence            999999999999999999999875 7999999999999999999999999 998854

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.96  E-value=2.4e-29  Score=200.09  Aligned_cols=113  Identities=30%  Similarity=0.560  Sum_probs=91.4

Q ss_pred             HHHHHHHHHhhhhhccCCCeeeeEEEEeCCCCCCCCCCCccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeCCC
Q 027391            6 YYLLSVVMLLPALCYSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS-RLWNNGAGCGTCYQVRCTVP   84 (224)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~g~aT~Yg~~~g~g~~~GACGy~~~~~~~~~~~vaAls-~~~~~G~~CG~C~eV~c~~~   84 (224)
                      ++++.+++++.+...    ..+|+||||++.+     .|||+ ++   .+++.++||+| ++|++|+.||+||||+|.++
T Consensus         6 ~~~~~~~~~~~~~~~----~~~G~AT~Y~~~~-----~gAC~-~~---~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~   72 (125)
T PLN03024          6 LIFSTVLVFLFSVSY----ATPGIATFYTSYT-----PSACY-RG---TSFGVMIAAASDSLWNNGRVCGKMFTVKCKGP   72 (125)
T ss_pred             HHHHHHHHHHhhhhc----ccceEEEEeCCCC-----Ccccc-CC---CCCCCEeEEeCHHHcCCCcccCceEEEEECCC
Confidence            334444444544433    3469999998752     48994 43   34688999999 99999999999999999765


Q ss_pred             -----CcccCCcEEEEEecCCC-CCCCCeeeCHHHHHhhhccccccccccCceeeeEEEE
Q 027391           85 -----EICTDEGVSVVVTDYGE-GDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFER  138 (224)
Q Consensus        85 -----~~C~~~sv~V~VtD~Cp-~~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~  138 (224)
                           .+|++++|+|+|+|+|| +|..|||||++||.+||++       +.|+|+|+|.+
T Consensus        73 ~~~~~~~c~gksV~V~VtD~CP~~C~~~~DLS~~AF~~iA~~-------~aG~v~V~y~~  125 (125)
T PLN03024         73 RNAVPHPCTGKSVTVKIVDHCPSGCASTLDLSREAFAQIANP-------VAGIINIDYIP  125 (125)
T ss_pred             CccccccccCCeEEEEEEcCCCCCCCCceEcCHHHHHHhcCc-------cCCEEEEEEeC
Confidence                 37999999999999999 5889999999999999964       78999999974

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.93  E-value=6.8e-25  Score=181.74  Aligned_cols=167  Identities=22%  Similarity=0.247  Sum_probs=141.2

Q ss_pred             ccCCCeeeeEEEEeCCCCCCCCCCCccCCCCCCCCCCCceEEEec-cccCCC----CCCCceEEEEeCCCCcccCCcEEE
Q 027391           20 YSQYSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS-RLWNNG----AGCGTCYQVRCTVPEICTDEGVSV   94 (224)
Q Consensus        20 ~~~~~~~~g~aT~Yg~~~g~g~~~GACGy~~~~~~~~~~~vaAls-~~~~~G----~~CG~C~eV~c~~~~~C~~~sv~V   94 (224)
                      .+-.+-+.|-|||-+..    ..+||=-   +++.+..+.|.|++ ++-+-|    +.-|+.++|.  +|    +++.+|
T Consensus        25 ~awd~~f~G~ATyTgsG----YsGGAfl---LDPI~sd~eITAlNPaqlNlGGipAAmAGaYLrVq--GP----KG~TTV   91 (232)
T COG4305          25 AAWDDLFEGYATYTGSG----YSGGAFL---LDPIPSDMEITALNPAQLNLGGIPAAMAGAYLRVQ--GP----KGKTTV   91 (232)
T ss_pred             cccccccceeEEEeccc----ccCceEE---ecCcCCcceeeecCHHHcccCCchhhhccceEEEE--CC----CCceEE
Confidence            33445578999997665    3667764   34455578899999 766654    5689999998  66    578899


Q ss_pred             EEecCCCCC-CCCeeeCHHHHHhhhccccccccccCceeeeEEEEEecCCCCcceEEEEecCCCCCcEEEEEEEEecCCC
Q 027391           95 VVTDYGEGD-DTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQN  173 (224)
Q Consensus        95 ~VtD~Cp~~-~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~~~g~ni~~~v~~gS~~~~w~al~v~n~~G~g  173 (224)
                      .|||+.|+. .+.|||||.||.+|+       ++.+|+|+|+||.|+-|..| |+.+++|||| +.||-++||+|+.  -
T Consensus        92 YVTDlYPegasGaLDLSpNAFakIG-------nm~qGrIpvqWrvv~aPvtG-N~~YRiKeGS-s~WWAAIQVRnH~--y  160 (232)
T COG4305          92 YVTDLYPEGASGALDLSPNAFAKIG-------NMKQGRIPVQWRVVKAPVTG-NFTYRIKEGS-SRWWAAIQVRNHK--Y  160 (232)
T ss_pred             EEecccccccccccccChHHHhhhc-------chhcCccceeEEEecccccc-cEEEEEecCC-ccceeeeeeeccc--C
Confidence            999999985 589999999999999       56899999999999999999 9999999999 8999999999998  9


Q ss_pred             CcEEEEEEEcCccCcEEcccccCceeeeccccCCccce-EE
Q 027391          174 DVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLS-RL  213 (224)
Q Consensus       174 ~I~sVev~~~g~~~W~~l~r~~g~~W~~~~~~~~~~~~-~~  213 (224)
                      ||.++|+.+++  .|..|....+|.+ +...|+.++|. |+
T Consensus       161 PV~KlE~~qdg--~WinlpK~dYNhF-VgT~LG~~pL~~Rm  198 (232)
T COG4305         161 PVMKLEYEQDG--KWINLPKMDYNHF-VGTNLGTGPLKVRM  198 (232)
T ss_pred             ceEEEEEecCC--eEeecccccccee-eccccCCCceEEEE
Confidence            99999999888  6999999888665 56788899998 65

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.87  E-value=1.4e-22  Score=152.03  Aligned_cols=70  Identities=36%  Similarity=0.779  Sum_probs=62.4

Q ss_pred             EEEec-cccCCCCCCCceEEEEeC-CCCcccC-CcEEEEEecCCCC--------------CCCCeeeCHHHHHhhhcccc
Q 027391           60 VAGVS-RLWNNGAGCGTCYQVRCT-VPEICTD-EGVSVVVTDYGEG--------------DDTDFILSPRAYGRMAVADK  122 (224)
Q Consensus        60 vaAls-~~~~~G~~CG~C~eV~c~-~~~~C~~-~sv~V~VtD~Cp~--------------~~~~~DLS~~AF~~la~~~~  122 (224)
                      +||+| +||++|++||+||||+|. ++++|.+ ++|+|+|||+||.              ++.|||||+.||.+||+   
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA~---   77 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIAQ---   77 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCCCCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHhh---
Confidence            48999 999999999999999996 5668976 4999999999996              25899999999999995   


Q ss_pred             ccccccCceeeeEE
Q 027391          123 SEELYSHGVVDVEF  136 (224)
Q Consensus       123 ~~~~~~~G~i~I~w  136 (224)
                          ++.|+|+|+|
T Consensus        78 ----~~~Gvi~v~y   87 (87)
T smart00837       78 ----YKAGIVPVKY   87 (87)
T ss_pred             ----hcCCEEeeEC
Confidence                4889999987

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PF01357 Pollen_allerg_1: Pollen allergen; InterPro: IPR007117 Expansins are unusual proteins that mediate cell wall extension in plants []

Probab=99.81  E-value=9.1e-20  Score=135.26  Aligned_cols=71  Identities=30%  Similarity=0.346  Sum_probs=59.4

Q ss_pred             eEEEEecCCCCCcEEEEEEEEecCCCCcEEEEEEEcCccCcEEcccccCceeeeccccCCccce-EEeecCCc
Q 027391          148 VMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLS-RLGADEKG  219 (224)
Q Consensus       148 i~~~v~~gS~~~~w~al~v~n~~G~g~I~sVev~~~g~~~W~~l~r~~g~~W~~~~~~~~~~~~-~~~~~~~~  219 (224)
                      |+|+|+++| +||||+++|.|++|.++|++|||++.++..|++|+|+||++|++++.+.+++|+ |+.+.|+|
T Consensus         1 v~f~V~~gS-~~~~l~v~v~n~gG~gdi~~Vevk~~~s~~W~~m~r~wGa~W~~~~~~~~~pls~Rvts~~~G   72 (82)
T PF01357_consen    1 VRFTVKGGS-NPYYLAVLVKNVGGDGDIKAVEVKQSGSGNWIPMKRSWGAVWQIDSNPPGGPLSFRVTSGDSG   72 (82)
T ss_dssp             EEEEE-TT--BTTEEEEEEEECCTTS-EEEEEEEETTSSS-EE-EEECTTEEEEE-SS--SSEEEEEEETTTS
T ss_pred             CEEEECCCC-CCcEEEEEEEEcCCCccEEEEEEEeCCCCCceEeecCcCceEEECCCCcCCCEEEEEEEcCCC
Confidence            789999999 999999999999999999999999999888999999999999999877899999 99986655

They are believed to act as a sort of chemical grease, allowing polymers to slide past one another by disrupting non-covalent hydrogen bonds that hold many wall polymers to one another. This process is not degradative and hence does not weaken the wall, which could otherwise rupture under internal pressure during growth. Sequence comparisons indicate at least four distinct expansin cDNAs in rice and at least six in Arabidopsis. The proteins are highly conserved in size and sequence (75-95% amino acid sequence similarity between any pairwise comparison), and phylogenetic trees indicate that this multigene family formed before the evolutionary divergence of monocotyledons and dicotyledons []. Sequence and motif analyses show no similarities to known functional domains that might account for expansin action on wall extension. It is thought that several highly-conserved tryptophans may function in expansin binding to cellulose, or other glycans. The high conservation of the family indicates that the mechanism by which expansins promote wall extensin tolerates little variation in protein structure. Grass pollens, such as pollen from timothy grass, represent a major cause of type I allergy []. Interestingly, expansins share a high degree of sequence similarity with the Lol p I family of allergens. This entry represents the C-terminal domain.; PDB: 2VXQ_A 1WHP_A 1BMW_A 1WHO_A 2HCZ_X 2JNZ_A 3FT9_A 3FT1_C 1N10_B.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.79  E-value=1.7e-19  Score=131.80  Aligned_cols=70  Identities=37%  Similarity=0.669  Sum_probs=58.0

Q ss_pred             EEEec-cccCCCCCCCceEEEEeCC--CCc--ccC--CcEEEEEecCCCCC-CCCeeeCHHHHHhhhccccccccccCce
Q 027391           60 VAGVS-RLWNNGAGCGTCYQVRCTV--PEI--CTD--EGVSVVVTDYGEGD-DTDFILSPRAYGRMAVADKSEELYSHGV  131 (224)
Q Consensus        60 vaAls-~~~~~G~~CG~C~eV~c~~--~~~--C~~--~sv~V~VtD~Cp~~-~~~~DLS~~AF~~la~~~~~~~~~~~G~  131 (224)
                      +||++ .+|++|.+||+||+++|..  +..  |..  ++|+|+|+|+||++ .+|||||+.||++|+.+       +.|+
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~Cp~~~~~~lDLS~~aF~~la~~-------~~G~   73 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATGTCKVGNKSVTVTVVDRCPGCPPNHLDLSPAAFKALADP-------DAGV   73 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT--BESEECEEEEEEEEE-TTSSSSEEEEEHHHHHHTBST-------TCSS
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccceEEecCCeEEEEEEccCCCCcCCEEEeCHHHHHHhCCC-------CceE
Confidence            58899 9999999999999999932  323  776  99999999999985 59999999999999954       7899


Q ss_pred             eeeEE
Q 027391          132 VDVEF  136 (224)
Q Consensus       132 i~I~w  136 (224)
                      ++|+|
T Consensus        74 i~V~w   78 (78)
T PF03330_consen   74 IPVEW   78 (78)
T ss_dssp             EEEEE
T ss_pred             EEEEC
Confidence            99998

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>PLN00115 pollen allergen group 3; Provisional

Probab=99.50  E-value=7.1e-14  Score=110.27  Aligned_cols=68  Identities=18%  Similarity=0.082  Sum_probs=58.7

Q ss_pred             CcceEEEEecCCCCCcEEEEEEEEecCCCCcEEEEEEEcCccCcE-EcccccCceeeecc--ccCCccce-EEeecCCc
Q 027391          145 GYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLT-SKQLIFGPSIACNA--FVGAEGLS-RLGADEKG  219 (224)
Q Consensus       145 g~ni~~~v~~gS~~~~w~al~v~n~~G~g~I~sVev~~~g~~~W~-~l~r~~g~~W~~~~--~~~~~~~~-~~~~~~~~  219 (224)
                      |++|+|+|+++| ||+||++++ |    ++|.+||||+.++..|+ +|+|+||++|++++  +|.| ||+ |+.+++.+
T Consensus        23 g~~v~F~V~~gS-np~yL~ll~-~----~dI~~V~Ik~~g~~~W~~~M~rswGavW~~~s~~pl~G-PlS~R~t~~~G~   94 (118)
T PLN00115         23 ATEVTFKVGKGS-SSTSLELVT-N----VAISEVEIKEKGAKDWVDDLKESSTNTWTLKSKAPLKG-PFSVRFLVKGGG   94 (118)
T ss_pred             CCceEEEECCCC-CcceEEEEE-e----CCEEEEEEeecCCCcccCccccCccceeEecCCCCCCC-ceEEEEEEeCCC
Confidence            459999999999 899998876 3    56999999999877899 99999999999765  6777 999 99886443

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=98.98  E-value=3.9e-10  Score=87.93  Aligned_cols=63  Identities=27%  Similarity=0.541  Sum_probs=45.7

Q ss_pred             CCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCCCCeeeCHHHHHhhhccccccccccCceeeeEEEEEec
Q 027391           70 GAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPC  141 (224)
Q Consensus        70 G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C  141 (224)
                      -..||+|++|+.+.    ++.+++|+|+|+|+.+  +|||++..|.+|-..|   +....|.+.|+|++|+|
T Consensus        57 q~~CGkClrVTNt~----tga~~~~RIVDqCsnG--GLDld~~vF~~iDtdG---~G~~~Ghl~V~y~fV~C  119 (119)
T PF00967_consen   57 QDSCGKCLRVTNTA----TGAQVTVRIVDQCSNG--GLDLDPTVFNQIDTDG---QGYAQGHLIVDYEFVDC  119 (119)
T ss_dssp             GGGTT-EEEEE-TT----T--EEEEEEEEE-SSS--SEES-SSSHHHH-SSS---HHHHHTEEEEEEEEE--
T ss_pred             cccccceEEEEecC----CCcEEEEEEEEcCCCC--CcccChhHHhhhccCC---cccccceEEEEEEEEcC
Confidence            36899999999644    3679999999999866  9999999999997533   24568999999999998

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=98.38  E-value=2.4e-06  Score=67.70  Aligned_cols=69  Identities=23%  Similarity=0.489  Sum_probs=49.4

Q ss_pred             ceEEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCCCCeeeCHHHHHhhhccccccccccCceeeeE
Q 027391           58 ANVAGVS--RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVE  135 (224)
Q Consensus        58 ~~vaAls--~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~  135 (224)
                      .+|.+..  +-|+ ...||.|+|++..      +++|.|..+|.-+   ..|+|+.+||+.|.+. +   ....|+|+++
T Consensus        43 p~IGg~~~V~gWn-S~~CGtC~~lty~------g~si~vlaID~a~---~gfnis~~A~n~LT~g-~---a~~lG~V~a~  108 (119)
T PF07249_consen   43 PYIGGAPAVAGWN-SPNCGTCWKLTYN------GRSIYVLAIDHAG---GGFNISLDAMNDLTNG-Q---AVELGRVDAT  108 (119)
T ss_dssp             TSEEEETT--STT--TTTT-EEEEEET------TEEEEEEEEEE-S---SSEEE-HHHHHHHHTS-----CCCC-EEE-E
T ss_pred             CeeccccccccCC-CCCCCCeEEEEEC------CeEEEEEEEecCC---CcccchHHHHHHhcCC-c---ccceeEEEEE
Confidence            4677777  6785 5789999999962      5799999999843   4699999999999863 2   3467999999


Q ss_pred             EEEEe
Q 027391          136 FERVP  140 (224)
Q Consensus       136 wr~V~  140 (224)
                      |++|+
T Consensus       109 ~~qV~  113 (119)
T PF07249_consen  109 YTQVD  113 (119)
T ss_dssp             EEEE-
T ss_pred             EEEcC
Confidence            99996

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>TIGR00413 rlpA rare lipoprotein A

Probab=98.07  E-value=5e-05  Score=65.32  Aligned_cols=94  Identities=29%  Similarity=0.265  Sum_probs=68.5

Q ss_pred             eEEEEeCCC-CCCCCCCCccCCCCCCCCCCCceEEEeccccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCC-CCC
Q 027391           28 SRATYYGSP-DGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEG-DDT  105 (224)
Q Consensus        28 g~aT~Yg~~-~g~g~~~GACGy~~~~~~~~~~~vaAls~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~-~~~  105 (224)
                      |.|+|||.. .|.   ..|.|-. ++   ...++||-..+     -.|..++|+...    ++++|+|+|.|++|- ...
T Consensus         1 G~ASwYg~~f~G~---~TAnGe~-y~---~~~~tAAHktL-----PlgT~V~VtNl~----ngrsviVrVnDRGPf~~gR   64 (208)
T TIGR00413         1 GLASWYGPKFHGR---KTANGEV-YN---MKALTAAHKTL-----PFNTYVKVTNLH----NNRSVIVRINDRGPFSDDR   64 (208)
T ss_pred             CEEeEeCCCCCCC---cCCCCee-cC---CCccccccccC-----CCCCEEEEEECC----CCCEEEEEEeCCCCCCCCC
Confidence            679999875 221   1444421 11   12355554433     578999999755    378999999999997 457


Q ss_pred             CeeeCHHHHHhhhccccccccccCceeeeEEEEEecCCC
Q 027391          106 DFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFR  144 (224)
Q Consensus       106 ~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~~~  144 (224)
                      -+|||++|+.+|+       ....|+.+|+.+.+.....
T Consensus        65 iIDLS~aAA~~Lg-------~~~~G~a~V~vevl~~~~~   96 (208)
T TIGR00413        65 IIDLSHAAAREIG-------LISRGVGQVRIEVLHVAKN   96 (208)
T ss_pred             EEECCHHHHHHcC-------CCcCceEEEEEEEEecCCC
Confidence            8999999999999       5589999999999987654

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=97.82  E-value=0.00016  Score=63.16  Aligned_cols=58  Identities=22%  Similarity=0.197  Sum_probs=50.2

Q ss_pred             CceEEEEeCCCCcccCCcEEEEEecCCCC-CCCCeeeCHHHHHhhhccccccccccCceeeeEEEEEecC
Q 027391           74 GTCYQVRCTVPEICTDEGVSVVVTDYGEG-DDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCR  142 (224)
Q Consensus        74 G~C~eV~c~~~~~C~~~sv~V~VtD~Cp~-~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~  142 (224)
                      |...+|+..+    ++++|+|+|.|++|- ..-.||||..|+++|+       ....|+.+|+.+.+.+.
T Consensus       120 ~t~v~VtNl~----NgrsvvVRINDRGPf~~gRiIDlS~aAA~~l~-------~~~~G~a~V~i~~l~~~  178 (233)
T COG0797         120 PTYVRVTNLD----NGRSVVVRINDRGPFVSGRIIDLSKAAADKLG-------MIRSGVAKVRIEVLGVA  178 (233)
T ss_pred             CCEEEEEEcc----CCcEEEEEEeCCCCCCCCcEeEcCHHHHHHhC-------CccCceEEEEEEEeccc
Confidence            5778999766    378999999999997 4578999999999999       45789999999999866

>PRK10672 rare lipoprotein A; Provisional

Probab=97.31  E-value=0.0032  Score=58.41  Aligned_cols=91  Identities=20%  Similarity=0.147  Sum_probs=60.6

Q ss_pred             eeEEEEeCCCCCCCCCCCccCCCCCCCCCCCceEEEeccccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCC-CCC
Q 027391           27 NSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEG-DDT  105 (224)
Q Consensus        27 ~g~aT~Yg~~~g~g~~~GACGy~~~~~~~~~~~vaAls~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~-~~~  105 (224)
                      .|.|+|||......  -.|-|-. ++   ...++||-..|     --|..++|+...    ++++|+|+|.|++|- ...
T Consensus        80 ~G~ASwYg~~f~G~--~TA~Ge~-~~---~~~~tAAH~tL-----Plps~vrVtNl~----ngrsvvVrVnDRGP~~~gR  144 (361)
T PRK10672         80 AGLAAIYDAEAGSN--LTASGER-FD---PNALTAAHPTL-----PIPSYVRVTNLA----NGRMIVVRINDRGPYGPGR  144 (361)
T ss_pred             EEEEEEeCCccCCC--cCcCcee-ec---CCcCeeeccCC-----CCCCEEEEEECC----CCcEEEEEEeCCCCCCCCC
Confidence            68888888652110  1222211 11   12455554432     357899999765    478999999999997 457


Q ss_pred             CeeeCHHHHHhhhccccccccccCceeeeEEEEE
Q 027391          106 DFILSPRAYGRMAVADKSEELYSHGVVDVEFERV  139 (224)
Q Consensus       106 ~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V  139 (224)
                      -||||..|+.+|+-       ...+.|.|+.-.|
T Consensus       145 iiDLS~aAA~~Lg~-------~~~~~V~ve~i~v  171 (361)
T PRK10672        145 VIDLSRAAADRLNT-------SNNTKVRIDPIIV  171 (361)
T ss_pred             eeEcCHHHHHHhCC-------CCCceEEEEEEee
Confidence            89999999999994       3456677777666

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=91.80  E-value=0.17  Score=43.62  Aligned_cols=53  Identities=23%  Similarity=0.298  Sum_probs=31.8

Q ss_pred             EEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCC-CCCCeeeCHHH
Q 027391           60 VAGVS-RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEG-DDTDFILSPRA  113 (224)
Q Consensus        60 vaAls-~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~-~~~~~DLS~~A  113 (224)
                      .||.+ .-..+...|++|||++=++.+ -.+++.+|+|++.--. ..+||||.-.-
T Consensus        70 faA~~~~G~~e~~~Cc~Cy~LtFt~g~-l~GKkmiVQ~tNtG~dlg~n~FDl~iPG  124 (201)
T PF02015_consen   70 FAAASITGGSESSWCCACYELTFTSGP-LKGKKMIVQVTNTGGDLGSNQFDLAIPG  124 (201)
T ss_dssp             EEEEE-TT--HHHHTT-EEEEEE-SST-TTT-EEEEEEEEE-TTTTTTEEEEE-TT
T ss_pred             eeeeeecCCCCCCcccceEEEEEcCCC-cCCCEeEEEecccCCCCCCCeEEEEeCC
Confidence            34444 322333679999999976522 2467899999988754 56899987543

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	224
1n10_A	241	Crystal Structure Of Phl P 1, A Major Timothy Grass		3e-21
2hcz_X	245	Crystal Structure Of Expb1 (Zea M 1), A Beta-Expans		5e-21

>pdb|1N10|A Chain A, Crystal Structure Of Phl P 1, A Major Timothy Grass Pollen Allergen Length = 241

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 97/167 (58%), Gaps = 15/167 (8%)
Query: 24  SFTNSRATYYGSPDGLGTPT--GACGFGGYGRNVNDANVAGVS-----RLWNNGAGCGTC 76
            + ++++T+YG P G G     GACG+    ++V+    +G++      ++ +G GCG+C
Sbjct: 18  KWLDAKSTWYGKPTGAGPKDNGGACGY----KDVDKPPFSGMTGCGNTPIFKSGRGCGSC 73
Query: 77  YQVRCTVPEICTDEGVSVVVTDYGEGD--DTDFILSPRAYGRMAVADKSEELYSHGVVDV 134
           ++++CT PE C+ E V V +TD  E       F LS  A+G MA     ++L S G +++
Sbjct: 74  FEIKCTKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELEL 133
Query: 135 EFERVPCRF-RGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEI 180
           +F RV C++  G  V F V + S  P YLA+ + YV+G  DV+AV+I
Sbjct: 134 QFRRVKCKYPEGTKVTFHVEKGSN-PNYLALLVKYVNGDGDVVAVDI 179

>pdb|2HCZ|X Chain X, Crystal Structure Of Expb1 (Zea M 1), A Beta-Expansin And Group-1 Pollen Allergen From Maize Length = 245

Iteration: 1
 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 15/183 (8%)
Query: 24  SFTNSRATYYGSPDGLGTPT--GACGFGGYGRNVNDANVAGVS-----RLWNNGAGCGTC 76
            +  +RAT+YG P+G G P   GACG     +NVN    +G++      ++ +G GCG+C
Sbjct: 18  KWLTARATWYGQPNGAGAPDNGGACGI----KNVNLPPYSGMTACGNVPIFKDGKGCGSC 73
Query: 77  YQVRCTVPEICTDEGVSVVVTD--YGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDV 134
           Y+VRC     C+   V+V +TD  Y       F LS +A+G +A    ++++   G++DV
Sbjct: 74  YEVRCKEKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDV 133
Query: 135 EFERVPCRFR-GYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQL 193
           EF RV C++  G  ++F + +    P YLAV + YV+   D++ +EI   ++ +    +L
Sbjct: 134 EFRRVRCKYPAGQKIVFHIEKGCN-PNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKL 192
Query: 194 IFG 196
            +G
Sbjct: 193 SWG 195

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	224
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	4e-39
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	1e-36
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	5e-20
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	4e-06
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	8e-06
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	8e-05

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score =  134 bits (337), Expect = 4e-39
 Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 5/167 (2%)

Query: 24  SFTNSRATYYGSPDGLGTPT--GACGFGGYGRNVNDANVAGVSR-LWNNGAGCGTCYQVR 80
            +  +RAT+YG P+G G P   GACG             A  +  ++ +G GCG+CY+VR
Sbjct: 18  KWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVR 77

Query: 81  CTVPEICTDEGVSVVVTD--YGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFER 138
           C     C+   V+V +TD  Y       F LS +A+G +A    ++++   G++DVEF R
Sbjct: 78  CKEKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRR 137

Query: 139 VPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVIT 185
           V C++     +    E    P YLAV + YV+   D++ +EI   ++
Sbjct: 138 VRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLS 184

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score =  128 bits (321), Expect = 1e-36
 Identities = 52/164 (31%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 24  SFTNSRATYYGSPDGLGTPT--GACGFGGYGRNVNDANVAGVSR-LWNNGAGCGTCYQVR 80
            + ++++T+YG P G G     GACG+    +          +  ++ +G GCG+C++++
Sbjct: 18  KWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIK 77

Query: 81  CTVPEICTDEGVSVVVTD--YGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFER 138
           CT PE C+ E V V +TD          F LS  A+G MA     ++L S G ++++F R
Sbjct: 78  CTKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRR 137

Query: 139 VPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQ 182
           V C++     +    E    P YLA+ + YV+G  DV+AV+I +
Sbjct: 138 VKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKE 181

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score = 83.4 bits (206), Expect = 5e-20
 Identities = 33/159 (20%), Positives = 56/159 (35%), Gaps = 28/159 (17%)

Query: 29  RATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNG----AGCGTCYQVRCTVP 84
            ATY GS        GA        ++     A      N G    A  G+  +V     
Sbjct: 10  YATYTGSGYS----GGAFLLDPIPSDME--ITAINPADLNYGGVKAALAGSYLEVEGP-- 61

Query: 85  EICTDEGVSVVVTD-YGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRF 143
                   +V VTD Y EG      LSP A+ ++            G +++++  V    
Sbjct: 62  ----KGKTTVYVTDLYPEGARGALDLSPNAFRKIGN-------MKDGKINIKWRVVKAPI 110

Query: 144 RGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQ 182
            G N  +++ E S    + A+     + +  V+ +E  +
Sbjct: 111 TG-NFTYRIKEGSS-RWWAAI--QVRNHKYPVMKMEYEK 145

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} PDB: 3ft9_A Length = 100

 Score = 43.3 bits (102), Expect = 4e-06
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 145 GYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQ 182
              V F V + S  P+ L + + Y    + +  VE+ Q
Sbjct: 1   AVQVTFTVQKGSD-PKKLVLDIKYTRPGDSLAEVELRQ 37

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense} Length = 108

 Score = 42.5 bits (100), Expect = 8e-06
 Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 5/47 (10%)

Query: 136 FERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQ 182
                       V F V + S  P+ L + + Y    + +  VE+ Q
Sbjct: 7   HHHGSAV----QVTFTVQKGSD-PKKLVLDIKYTRPGDSLAEVELRQ 48

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1 Length = 181

 Score = 41.1 bits (95), Expect = 8e-05
 Identities = 29/170 (17%), Positives = 44/170 (25%), Gaps = 38/170 (22%)

Query: 23  YSFTNSRATYYGSPDGLGTPTGACGFG------GYGRNVNDANVAGVSRLWNN------G 70
              + +  T Y          GACG G       +G N      A     +++      G
Sbjct: 12  NGKSCASTTNYHDSHK-----GACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCG 66

Query: 71  AGCGTCYQVRCTVPEICT-----DEGVSVVVT-------DYGEG---DDTDFILSPRAYG 115
             CG C ++  T   +        EG+S            Y      +          YG
Sbjct: 67  QHCGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYG 126

Query: 116 R-----MAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQ 160
                 +               +  +E V C     N   +   NS Y Q
Sbjct: 127 YELHLDLENGRSQVTGMGWNNPETTWEVVNCDSEH-NHDHRTPSNSMYGQ 175

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	224
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	100.0
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	100.0
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	100.0
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.95
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	99.76
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	99.74
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.68
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	99.65
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.32
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	98.26
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	98.25
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	98.24
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	98.15
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	98.13
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	97.84
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	94.03

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=100.00  E-value=7.3e-59  Score=404.93  Aligned_cols=195  Identities=30%  Similarity=0.575  Sum_probs=174.6

Q ss_pred             cCCCeeeeEEEEeCCCCCCCC--CCCccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEEEe
Q 027391           21 SQYSFTNSRATYYGSPDGLGT--PTGACGFGGYGRNVNDANVAGVS-RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVT   97 (224)
Q Consensus        21 ~~~~~~~g~aT~Yg~~~g~g~--~~GACGy~~~~~~~~~~~vaAls-~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~Vt   97 (224)
                      ++.+|+.|+||||+++++.|+  ++|||||++++..|++.++||+| ++|++|+.||+||||+|.+++.|++++|+|+||
T Consensus        15 ~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~~C~~~~v~V~Vt   94 (241)
T 1n10_A           15 YGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHIT   94 (241)
T ss_dssp             CCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEEEE
T ss_pred             ccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCCccCCCCEEEEEe
Confidence            467899999999999988887  78999999988888999999999 999999999999999998877899999999999


Q ss_pred             cCCCC--CCCCeeeCHHHHHhhhccccccccccCceeeeEEEEEecCCCC-cceEEEEecCCCCCcEEEEEEEEecCCCC
Q 027391           98 DYGEG--DDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRG-YNVMFKVHENSRYPQYLAVSMLYVSGQND  174 (224)
Q Consensus        98 D~Cp~--~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~~~g-~ni~~~v~~gS~~~~w~al~v~n~~G~g~  174 (224)
                      |+|+.  +..|||||+.||.+||++++++++++.|+|+|+||||+|+++| +||+|+|++|| ++||++|+|.|++|.++
T Consensus        95 D~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs-~~~~~~vlv~n~~g~g~  173 (241)
T 1n10_A           95 DDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGS-NPNYLALLVKYVNGDGD  173 (241)
T ss_dssp             EECSSCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTC-BTTEEEEEEECCCCSSC
T ss_pred             EecCCCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCC-CcceEEEEEEecCCCCC
Confidence            99865  5799999999999999988888889999999999999999994 69999999999 89999999999999999


Q ss_pred             cEEEEEEEcCccCcEEcccccCceeeeccc--cCCccce-EEeecC
Q 027391          175 VLAVEIWQVITYKLTSKQLIFGPSIACNAF--VGAEGLS-RLGADE  217 (224)
Q Consensus       175 I~sVev~~~g~~~W~~l~r~~g~~W~~~~~--~~~~~~~-~~~~~~  217 (224)
                      |++|||+++++..|++|+|+||++|++++.  |.| +|+ |+.+.+
T Consensus       174 V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~g-pls~RvT~~~  218 (241)
T 1n10_A          174 VVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEG  218 (241)
T ss_dssp             EEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESS
T ss_pred             EEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCC-CEEEEEEEeC
Confidence            999999999866899999999999999997  777 899 998764

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=100.00  E-value=1.2e-58  Score=404.46  Aligned_cols=195  Identities=29%  Similarity=0.590  Sum_probs=181.4

Q ss_pred             cCCCeeeeEEEEeCCCCCCCC--CCCccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEEEe
Q 027391           21 SQYSFTNSRATYYGSPDGLGT--PTGACGFGGYGRNVNDANVAGVS-RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVT   97 (224)
Q Consensus        21 ~~~~~~~g~aT~Yg~~~g~g~--~~GACGy~~~~~~~~~~~vaAls-~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~Vt   97 (224)
                      ++.+|+.|+||||+++++.|+  ++|||||++++..|++.++||+| ++|++|+.||+||||+|.+++.|++++|+|+||
T Consensus        15 ~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~~C~~~sv~V~Vt   94 (245)
T 2hcz_X           15 YNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYIT   94 (245)
T ss_dssp             CCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSSSBCSSCEEEEEE
T ss_pred             cCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCCccCCCCEEEEEE
Confidence            467899999999999988887  78999999988888999999999 999999999999999998888899999999999


Q ss_pred             cCCCC--CCCCeeeCHHHHHhhhccccccccccCceeeeEEEEEecCCCC-cceEEEEecCCCCCcEEEEEEEEecCCCC
Q 027391           98 DYGEG--DDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRG-YNVMFKVHENSRYPQYLAVSMLYVSGQND  174 (224)
Q Consensus        98 D~Cp~--~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~~~g-~ni~~~v~~gS~~~~w~al~v~n~~G~g~  174 (224)
                      |+||.  +.+|||||+.||.+||++++++++++.|+|+|+||||+|+++| .||+|+|++|| ++||++|+|.|++|.++
T Consensus        95 D~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs-~~~~~avlv~n~~g~g~  173 (245)
T 2hcz_X           95 DMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGC-NPNYLAVLVKYVADDGD  173 (245)
T ss_dssp             EECCCTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCC-SSSCCCEEEECCCTTCC
T ss_pred             eccCCCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCC-CcceEEEEEEecCCCCC
Confidence            99986  5699999999999999988877888999999999999999984 58999999999 89999999999999999


Q ss_pred             cEEEEEEEcCccCcEEcccccCceeeeccc--cCCccce-EEeecC
Q 027391          175 VLAVEIWQVITYKLTSKQLIFGPSIACNAF--VGAEGLS-RLGADE  217 (224)
Q Consensus       175 I~sVev~~~g~~~W~~l~r~~g~~W~~~~~--~~~~~~~-~~~~~~  217 (224)
                      |++|||+++++..|++|+|+||++|++++.  |.| +|+ |+.+.+
T Consensus       174 V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~g-pls~RvT~~~  218 (245)
T 2hcz_X          174 IVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSES  218 (245)
T ss_dssp             EEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCS-SCCEEEEETT
T ss_pred             EEEEEEEeCCCCceeECccCCCCEEEECCCCCCCC-CEEEEEEEeC
Confidence            999999999877899999999999999996  777 899 998764

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=100.00  E-value=7.7e-47  Score=322.81  Aligned_cols=168  Identities=20%  Similarity=0.238  Sum_probs=149.0

Q ss_pred             CCeeeeEEEEeCCCCCCCCCCCccCCCCCCCCCCCceEEEec-cccCCC----CCCCceEEEEeCCCCcccCCcEEEEEe
Q 027391           23 YSFTNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVS-RLWNNG----AGCGTCYQVRCTVPEICTDEGVSVVVT   97 (224)
Q Consensus        23 ~~~~~g~aT~Yg~~~g~g~~~GACGy~~~~~~~~~~~vaAls-~~~~~G----~~CG~C~eV~c~~~~~C~~~sv~V~Vt   97 (224)
                      ...+.|+||||++..    .+||||+..   .|++.++||+| .+|++|    ..||+||||+|.      +++|+|+|+
T Consensus         4 ~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~------~gsv~V~v~   70 (208)
T 3d30_A            4 DDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP------KGKTTVYVT   70 (208)
T ss_dssp             TCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET------TEEEEEEEE
T ss_pred             CCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC------CCcEEEEEE
Confidence            456899999999853    579999863   45678999999 999988    899999999983      458999999


Q ss_pred             cCCCCCC-CCeeeCHHHHHhhhccccccccccCceeeeEEEEEecCCCCcceEEEEecCCCCCcEEEEEEEEecCCCCcE
Q 027391           98 DYGEGDD-TDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVL  176 (224)
Q Consensus        98 D~Cp~~~-~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~~~g~ni~~~v~~gS~~~~w~al~v~n~~G~g~I~  176 (224)
                      |+||+|. .|||||+.||.+||.       ++.|+++|+||+|+|+++| +|+|+|++|| ++||++|+|.|++|  +|+
T Consensus        71 D~CP~C~~~~~DLS~~aF~~la~-------~~~G~i~v~~~~V~C~~~G-~i~f~v~~Gs-~~~~~~v~v~n~~g--~v~  139 (208)
T 3d30_A           71 DLYPEGARGALDLSPNAFRKIGN-------MKDGKINIKWRVVKAPITG-NFTYRIKEGS-SRWWAAIQVRNHKY--PVM  139 (208)
T ss_dssp             EECTTCCTTCEEECHHHHHHHSC-------GGGSSEEEEEEEECCCCCS-CCEEEECTTC-SSSEEEEEEESCSS--CEE
T ss_pred             ECCCCCCCCeEECCHHHHHHhcc-------cCCCEEEEEEEEeCCCCCC-ceeEEEcCCC-CCceEEEEEEecCC--CEE
Confidence            9999865 899999999999995       4789999999999999999 9999999999 89999999999994  999


Q ss_pred             EEEEEEcCccCcEEcccccCceeeeccccCCccce-EEeecC
Q 027391          177 AVEIWQVITYKLTSKQLIFGPSIACNAFVGAEGLS-RLGADE  217 (224)
Q Consensus       177 sVev~~~g~~~W~~l~r~~g~~W~~~~~~~~~~~~-~~~~~~  217 (224)
                      +|||++++  .|++|+|+|+|+|+. +.+.+++|+ |+.+.+
T Consensus       140 ~v~i~~~~--~W~~m~r~~~n~~~~-~~~~~~pls~rvT~~~  178 (208)
T 3d30_A          140 KMEYEKDG--KWINMEKMDYNHFVS-TNLGTGSLKVRMTDIR  178 (208)
T ss_dssp             EEEEEETT--EEEEEEECTTSCEEE-ECCCSSSEEEEEEETT
T ss_pred             EEEEecCC--cEEEccccccceeec-CCCCCCCEEEEEEECC
Confidence            99999884  699999999877754 678899999 998754

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.95  E-value=6.1e-29  Score=206.05  Aligned_cols=110  Identities=18%  Similarity=0.249  Sum_probs=92.6

Q ss_pred             CCeeeeEEEEeCCCCCCCCCCCccCCC-----CCCCCCCCceEEEec-cccCCC------CCCCceEEEEeCCCC-----
Q 027391           23 YSFTNSRATYYGSPDGLGTPTGACGFG-----GYGRNVNDANVAGVS-RLWNNG------AGCGTCYQVRCTVPE-----   85 (224)
Q Consensus        23 ~~~~~g~aT~Yg~~~g~g~~~GACGy~-----~~~~~~~~~~vaAls-~~~~~G------~~CG~C~eV~c~~~~-----   85 (224)
                      ..|..++||||++.     ++|||||+     ++.+.+++.++|||| +||++|      +.||+||||+|++..     
T Consensus        12 ~g~~~A~aT~Yg~~-----~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg   86 (181)
T 1wc2_A           12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (181)
T ss_dssp             TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CCccccceeEecCC-----CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence            36999999999986     67999999     555567799999999 999997      899999999997632     


Q ss_pred             -ccc-CCcEEEEEecCCCC-------C--------------CCCeeeCHHHHHhhhccccccccccCceeeeEEEEEecC
Q 027391           86 -ICT-DEGVSVVVTDYGEG-------D--------------DTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCR  142 (224)
Q Consensus        86 -~C~-~~sv~V~VtD~Cp~-------~--------------~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~  142 (224)
                       +|. +++|+|||||+||.       |              +.||||+..| .+|+.       ...|+++|+||||+|+
T Consensus        87 ~~~~~g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~-------~~~GivpV~yrrV~C~  158 (181)
T 1wc2_A           87 GPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTG-------MGWNNPETTWEVVNCD  158 (181)
T ss_dssp             CCCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGG-------GTCSSEEEEEEEECHH
T ss_pred             ccCCCCCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhh-------hcCCCceeEEEEEeCC
Confidence             233 35899999999992       2              5799999999 88983       5789999999999998


Q ss_pred             CCC
Q 027391          143 FRG  145 (224)
Q Consensus       143 ~~g  145 (224)
                      ..+
T Consensus       159 ~~~  161 (181)
T 1wc2_A          159 SEH  161 (181)
T ss_dssp             HHH
T ss_pred             CCC
Confidence            744

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A

Probab=99.76  E-value=1.2e-18  Score=132.65  Aligned_cols=69  Identities=17%  Similarity=0.190  Sum_probs=64.3

Q ss_pred             cceEEEEecCCCCCcEEEEEEEEecCCCCcEEEEEEEcCccCcEEcccccCceeeecc--ccCCccce-EEeecC
Q 027391          146 YNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNA--FVGAEGLS-RLGADE  217 (224)
Q Consensus       146 ~ni~~~v~~gS~~~~w~al~v~n~~G~g~I~sVev~~~g~~~W~~l~r~~g~~W~~~~--~~~~~~~~-~~~~~~  217 (224)
                      .+|+|+|+++| +|||++|+|.|++|.+||++||||++++..|++|+| ||++|++++  +|.| +|| |+.+.+
T Consensus         2 ~~i~F~V~~gs-~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~G-plSfRvt~~~   73 (100)
T 3ft1_A            2 VQVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVG-PFNFRFMSKG   73 (100)
T ss_dssp             BEEEEEECTTC-BTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCS-SEEEEEEETT
T ss_pred             CCEEEEEecCC-CcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCC-CEEEEEEEcC
Confidence            48999999999 899999999999999999999999998768999999 999999998  7888 999 998765

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}

Probab=99.74  E-value=7.7e-18  Score=129.79  Aligned_cols=72  Identities=17%  Similarity=0.184  Sum_probs=66.2

Q ss_pred             CCcceEEEEecCCCCCcEEEEEEEEecCCCCcEEEEEEEcCccCcEEcccccCceeeecc--ccCCccce-EEeecCC
Q 027391          144 RGYNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNA--FVGAEGLS-RLGADEK  218 (224)
Q Consensus       144 ~g~ni~~~v~~gS~~~~w~al~v~n~~G~g~I~sVev~~~g~~~W~~l~r~~g~~W~~~~--~~~~~~~~-~~~~~~~  218 (224)
                      .|+||.|+|+++| +|||++|+|.|++|.+||++||||+.++..|++|+|+ |++|++++  +|.| +|+ |+.+++.
T Consensus        11 ~g~~v~f~V~~~s-np~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~G-plSfRvtts~G   85 (108)
T 2jnz_A           11 SAVQVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVG-PFNFRFMSKGG   85 (108)
T ss_dssp             CCCEEEEEECTTC-CSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCS-SEEEEEEETTT
T ss_pred             CCccEEEEEecCC-CccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCC-CEEEEEEEcCC
Confidence            4689999999999 8999999999999999999999998666689999999 99999998  8889 999 9988654

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.68  E-value=2e-17  Score=130.24  Aligned_cols=66  Identities=21%  Similarity=0.471  Sum_probs=56.7

Q ss_pred             CCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCCCCeeeC-HHHHHhhhccccccccccCceeeeEEEEEecC
Q 027391           68 NNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILS-PRAYGRMAVADKSEELYSHGVVDVEFERVPCR  142 (224)
Q Consensus        68 ~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~~~~DLS-~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~  142 (224)
                      +++..||+|++|++..    ++++|+|+|+|+||.+  +|||| ++||++|+.++.   .++.|+++|+|++|+|+
T Consensus        58 ~~g~~CG~cv~Vtn~~----nGksV~V~VvD~CP~g--gLDLS~~~AF~~Ia~~g~---G~~~G~i~V~w~~V~C~  124 (125)
T 1bw3_A           58 RGQAACGKCLRVTNPA----TGAQITARIVDQCANG--GLDLDWDTVFTKIDTNGI---GYQQGHLNVNYQFVDCR  124 (125)
T ss_dssp             CSGGGTTCEEEEEETT----TTEEEEEEEEECCSSS--SCCSCSSSSHHHHCSSCH---HHHHSEEEEEEEEECCC
T ss_pred             CCCcccCCEEEeEeCC----CCCEEEEEEEEeCCCC--CCCCCCHHHHHHHhccCC---cccCcEEEEEEEEEeCC
Confidence            7789999999999854    3679999999999974  59999 999999996421   25789999999999996

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A

Probab=99.65  E-value=6e-18  Score=128.00  Aligned_cols=68  Identities=18%  Similarity=0.156  Sum_probs=62.8

Q ss_pred             cceEEEEecCCCCCcEEEEEEEEecCCCCcEEEEEEEcCccCcEEcccccCceeeecc--ccCCccce-EEeecC
Q 027391          146 YNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNA--FVGAEGLS-RLGADE  217 (224)
Q Consensus       146 ~ni~~~v~~gS~~~~w~al~v~n~~G~g~I~sVev~~~g~~~W~~l~r~~g~~W~~~~--~~~~~~~~-~~~~~~  217 (224)
                      ++|+|+|++|| +|||++|+|.|++  +||++||||++++..|++|+|+||++|++++  .|.| +|+ |+.+++
T Consensus         2 ~~i~F~V~~gs-~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~G-plSfRvt~~~   72 (96)
T 1bmw_A            2 PKVTFTVEKGS-NEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEK   72 (96)
T ss_dssp             CCCCCCCCTTC-SSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCC-CCCBCCEETT
T ss_pred             CCEEEEEecCC-CCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCC-CEEEEEEEcC
Confidence            48999999999 8999999999999  9999999999766689999999999999999  7888 999 998865

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.32  E-value=1.1e-11  Score=93.32  Aligned_cols=92  Identities=25%  Similarity=0.265  Sum_probs=71.6

Q ss_pred             eeeEEEEeCCCCCCCCCCCccCCCCCCCCCCCceEEEeccccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCC-
Q 027391           26 TNSRATYYGSPDGLGTPTGACGFGGYGRNVNDANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDD-  104 (224)
Q Consensus        26 ~~g~aT~Yg~~~g~g~~~GACGy~~~~~~~~~~~vaAls~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~-  104 (224)
                      ..|.|+||++.-. | .-.|||-.- +   ...++||-..+     .||..++|+...    ++++|+|+|.|+||... 
T Consensus         2 ~~G~ASwYg~~f~-G-~~TA~Ge~~-~---~~~~tAAH~tl-----P~gt~vrVtNl~----nGksVvVrVnDRGP~~~g   66 (95)
T 4avr_A            2 DTGEASYYGSRHA-G-LRTASGERY-N---PNAMTAAHRTL-----PFGARVRVTNLD----NRRSVVVRINDRGPFRRG   66 (95)
T ss_dssp             EEEEEEECCGGGT-T-SBCTTSCBC-C---TTSCEEECSSS-----CTTCEEEEEETT----TCCEEEEEEEECCCCSTT
T ss_pred             CEEEEEEECCccC-C-CCCCCccCc-C---CCCCEEEcCCC-----CCCcEEEEEECC----CCcEEEEEEccCCCCCCC
Confidence            4799999997421 1 237887432 1   14678887643     599999999755    47899999999999865 


Q ss_pred             CCeeeCHHHHHhhhccccccccccCceeeeEEEEE
Q 027391          105 TDFILSPRAYGRMAVADKSEELYSHGVVDVEFERV  139 (224)
Q Consensus       105 ~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V  139 (224)
                      ..||||+.||++|+       ..+.|+.+|+|+.+
T Consensus        67 riIDLS~aAa~~Lg-------~~~~G~~~V~ve~~   94 (95)
T 4avr_A           67 RIIDVSRKAAEGLG-------MIRSGVAPVRIESL   94 (95)
T ss_dssp             EEEEECHHHHHHHT-------CTTTSCEEEEEEEC
T ss_pred             CEEEeCHHHHHHhC-------CcCCCEEEEEEEEe
Confidence            57999999999999       45789999999986

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=98.26  E-value=2.7e-06  Score=66.34  Aligned_cols=69  Identities=23%  Similarity=0.500  Sum_probs=54.6

Q ss_pred             ceEEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCCCCeeeCHHHHHhhhccccccccccCceeeeE
Q 027391           58 ANVAGVS--RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVE  135 (224)
Q Consensus        58 ~~vaAls--~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~  135 (224)
                      .+|.+..  .-|+. ..||.|+|++..      +++|.|..+|.-+   ..|+|+.+||+.|.+ ++   ....|+|+++
T Consensus        44 P~IGg~~~i~gwns-~~CGtC~~lty~------g~si~vlaID~a~---~Gfnis~~A~n~LT~-G~---a~~lG~V~a~  109 (120)
T 3m3g_A           44 PYIGGAAAVAGWNS-ASCGTCWKLQYS------GHTIYVLAVDHAA---SGFNIALDAMNALTG-GQ---AVQLGRVSAT  109 (120)
T ss_dssp             TSEEEETTCCSTTC-TTTTCEEEEEET------TEEEEEEEEEECS---SSEEECHHHHHHHHT-SC---HHHHCEEECE
T ss_pred             CccccccccccCCC-CCCCceEEEEEC------CeEEEEEEEecCC---CceeecHHHHHHhhC-Cc---ceeeeeEeEE
Confidence            4577666  66764 789999999963      5799999999763   459999999999985 22   2245999999


Q ss_pred             EEEEe
Q 027391          136 FERVP  140 (224)
Q Consensus       136 wr~V~  140 (224)
                      |++|+
T Consensus       110 ~~~V~  114 (120)
T 3m3g_A          110 ATQVP  114 (120)
T ss_dssp             EEEEC
T ss_pred             EEEcC
Confidence            99996

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=98.25  E-value=2.8e-06  Score=66.42  Aligned_cols=69  Identities=30%  Similarity=0.509  Sum_probs=54.9

Q ss_pred             EEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCCCCeeeCHHHHHhhhccccccccccCceeeeEEE
Q 027391           60 VAGVS--RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFE  137 (224)
Q Consensus        60 vaAls--~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr  137 (224)
                      |.+..  +-|+. ..||.|+|++...    .+++|.|..+|.-++   .|+|+.+||+.|.+. +   ....|+|+++|+
T Consensus        46 IGg~~~V~gwnS-~~CGtC~~lty~~----~g~si~vlaID~a~~---Gfnis~~Amn~LT~G-~---a~~lG~V~a~~~  113 (122)
T 3sul_A           46 VGAVDTITGWNS-ESCGTCYQITWSG----TGKTIHVVGVDVAGN---GFNVGQRAMDDLTNG-Q---AVALGNIDVTAT  113 (122)
T ss_dssp             EEEETTCCSTTC-TTTTCEEEEEETT----TTEEEEEEEEEECSS---SEEECHHHHHHHHTS-C---HHHHSEEEEEEE
T ss_pred             cccccccccCCC-CCCCceEEEEEcC----CCcEEEEEEEecCCC---ceeehHHHHHHhcCC-c---ceecceEeEEEE
Confidence            76665  66776 9999999999742    257999999998754   499999999999853 2   234699999999


Q ss_pred             EEe
Q 027391          138 RVP  140 (224)
Q Consensus       138 ~V~  140 (224)
                      +|+
T Consensus       114 qV~  116 (122)
T 3sul_A          114 LVD  116 (122)
T ss_dssp             EEC
T ss_pred             EcC
Confidence            996

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=98.24  E-value=4.2e-06  Score=65.81  Aligned_cols=68  Identities=28%  Similarity=0.640  Sum_probs=56.4

Q ss_pred             ceEEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCCCCeeeCHHHHHhhhccccccccccCcee-ee
Q 027391           58 ANVAGVS--RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVV-DV  134 (224)
Q Consensus        58 ~~vaAls--~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~~~~DLS~~AF~~la~~~~~~~~~~~G~i-~I  134 (224)
                      .+|.+..  +-|+ ...||.|+||+..     ++++|.|+.+|.-++   .|+++.+||..|.+.      ...|+| ++
T Consensus        50 P~IGga~~iagWN-S~~CGtC~~lty~-----ng~sI~vlaID~A~~---gFnIs~~Amn~LT~G------~~lG~V~~a  114 (129)
T 2kqa_A           50 PNVGGIPDIAGWD-SPSCGTCWKVTIP-----NGNSIFIRGVDSGRG---GFNVNPTAFTKLVGS------TEAGRVDNV  114 (129)
T ss_dssp             SSEEEETTCCSTT-CTTCSCEEEEEET-----TTEEEEEEEEEECSS---SEEECHHHHHHHHSS------SSSCCBCSC
T ss_pred             CeeccchhhccCC-CCCCCceEEEEEc-----CCCEEEEEEEccCCC---ceeehHHHHHHhcCC------cccCcEeEE
Confidence            4577766  6687 6899999999963     268999999998763   699999999999963      357999 99


Q ss_pred             EEEEEe
Q 027391          135 EFERVP  140 (224)
Q Consensus       135 ~wr~V~  140 (224)
                      +|++|+
T Consensus       115 ~~~qV~  120 (129)
T 2kqa_A          115 NYVQVD  120 (129)
T ss_dssp             EEEECC
T ss_pred             EEEEcC
Confidence            999996

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.15  E-value=5.5e-06  Score=65.12  Aligned_cols=75  Identities=24%  Similarity=0.450  Sum_probs=55.7

Q ss_pred             ceEEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCCCCeeeCHHHHHhhhccccccccccCceeeeE
Q 027391           58 ANVAGVS--RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVE  135 (224)
Q Consensus        58 ~~vaAls--~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~  135 (224)
                      .+|.+..  .-|+. ..||.|+|++..++. -..++|.|..+|.-++   .|+|+.+||+.|.+. +   ....|+|+++
T Consensus        44 P~IGg~~~i~gwns-~~CGtC~~lty~g~~-~~~~si~vlaID~a~~---Gfnis~~Amn~LT~g-~---a~~lG~V~~~  114 (127)
T 3suj_A           44 PCIGGSSDIAGYNS-PNCGSCYQLTYSSAH-TTPKSIYMVAIDRSAE---GFTASKQAMDDLTNK-R---AEELGTVNVD  114 (127)
T ss_dssp             TSEEEETTCCSTTC-TTTTCEEEEEECCSS-SCCEEEEEEEEEECSS---SEEECHHHHHHHHTS-C---HHHHSSEEEE
T ss_pred             CeeccccccccCCC-CCCCceEEEEECCCC-CcceEEEEEEEecCCC---ceeecHHHHHHhcCC-c---cccceeEEEE
Confidence            4576665  66764 789999999975311 0126899999998754   499999999999853 2   2346899999


Q ss_pred             EEEEec
Q 027391          136 FERVPC  141 (224)
Q Consensus       136 wr~V~C  141 (224)
                      |++|+=
T Consensus       115 ~~~V~~  120 (127)
T 3suj_A          115 VRKVDF  120 (127)
T ss_dssp             EEEECG
T ss_pred             EEEeCH
Confidence            999963

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.13  E-value=5.7e-06  Score=64.90  Aligned_cols=73  Identities=21%  Similarity=0.441  Sum_probs=55.5

Q ss_pred             ceEEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCCCCeeeCHHHHHhhhccccccccccCceeeeE
Q 027391           58 ANVAGVS--RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDVE  135 (224)
Q Consensus        58 ~~vaAls--~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~  135 (224)
                      .+|.+..  .-|+. ..||.|+|++..++.  ..++|.|..+|.-++   .|+|+.+||+.|.+. +   ....|+|+++
T Consensus        45 P~IGg~~~i~gwnS-~~CGtC~~lty~g~~--~~~si~vlaID~a~~---Gfnis~~Amn~LT~G-~---a~~lG~V~~~  114 (125)
T 3suk_A           45 PHIGASSDIGGFNS-PACGNCYTISFTFQG--VTRSINLVAIDHAGN---GFNVAQAAMDELTNG-N---AVALGTIDVQ  114 (125)
T ss_dssp             TSEEEETTCCSTTC-TTTTCEEEEEEEETT--EEEEEEEEEEEECSS---SEEECHHHHHHHHTS-C---HHHHCEEEEE
T ss_pred             CeeccccccccCCC-CCCCeeEEEEEcCCC--cceEEEEEEEecCCC---ceeecHHHHHHhcCC-c---ccccceEeEE
Confidence            4577666  56764 889999999974321  237899999997653   499999999999863 2   2245999999


Q ss_pred             EEEEe
Q 027391          136 FERVP  140 (224)
Q Consensus       136 wr~V~  140 (224)
                      |++|+
T Consensus       115 ~~~V~  119 (125)
T 3suk_A          115 SQQVA  119 (125)
T ss_dssp             EEEEC
T ss_pred             EEEcC
Confidence            99996

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=97.84  E-value=4.9e-05  Score=60.16  Aligned_cols=73  Identities=18%  Similarity=0.290  Sum_probs=53.4

Q ss_pred             ceEEEeccccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCCCCeeeCHHHHHhhhccccccccccCceeee-EE
Q 027391           58 ANVAGVSRLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILSPRAYGRMAVADKSEELYSHGVVDV-EF  136 (224)
Q Consensus        58 ~~vaAls~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I-~w  136 (224)
                      .+|.|..  |+ ...||.|+||+..      +++|.|..+|.=.+. .-||||.+||+.|.+.-.+.+....|+|++ +|
T Consensus        48 P~igg~~--wn-s~~CGtCwkLtY~------G~sI~vlaID~a~~g-~~FnIs~~Amn~LT~G~~a~~a~elG~Vda~~~  117 (136)
T 3sum_A           48 PHFVAAP--EA-QTECGSCWKLRYK------GNHAFVTVVDRVEEA-NLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSA  117 (136)
T ss_dssp             TSEEECC--BT-TBCTTCEEEEEET------TEEEEEEEEECCCST-TEEEECHHHHHHHTCBTTBCHHHHHSEEECSEE
T ss_pred             Ccccccc--cC-CCCCCceEEEEEC------CeEEEEEEEecCCCc-ceEeehHHHHHHHhCCCccccceecceeeeeEE
Confidence            3466555  54 5889999999963      579999999976421 139999999999985311111245699999 99


Q ss_pred             EEEe
Q 027391          137 ERVP  140 (224)
Q Consensus       137 r~V~  140 (224)
                      ++|+
T Consensus       118 ~qVd  121 (136)
T 3sum_A          118 YQVD  121 (136)
T ss_dssp             EEEC
T ss_pred             EEcC
Confidence            9996

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=94.03  E-value=0.034  Score=46.82  Aligned_cols=39  Identities=23%  Similarity=0.382  Sum_probs=28.8

Q ss_pred             CCCCceEEEEeCCCCcccCCcEEEEEecCCCC-CCCCeeeC
Q 027391           71 AGCGTCYQVRCTVPEICTDEGVSVVVTDYGEG-DDTDFILS  110 (224)
Q Consensus        71 ~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~-~~~~~DLS  110 (224)
                      ..|++|||++=++. ...+++.+|+||+.... ..+||||.
T Consensus        84 ~~Cc~C~~LtFt~~-~~~GKkmiVQ~TNtG~Dl~~n~FDl~  123 (210)
T 2eng_A           84 GWCCACYELTFTSG-PVAGKKMVVQSTSTGGDLGSNHFDLN  123 (210)
T ss_dssp             HHTTCEEEEEECSG-GGTTCEEEEEEEEC-----CCEEEEE
T ss_pred             cccceeEEEEEcCC-CcCCCEEEEEEecccCCCCCCceeEe
Confidence            56999999997653 24578999999999966 56899985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	224
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	6e-33
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	6e-15
d1n10a1	95	b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {T	6e-05

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  114 bits (286), Expect = 6e-33
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 5/127 (3%)

Query: 24  SFTNSRATYYGSPDGLGTPT--GACGFGGYGRNVNDANVAGVS-RLWNNGAGCGTCYQVR 80
            + ++++T+YG P G G     GACG+    +          +  ++ +G GCG+C++++
Sbjct: 16  KWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIK 75

Query: 81  CTVPEICTDEGVSVVVTDYGEG--DDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFER 138
           CT PE C+ E V V +TD  E       F LS  A+G MA     ++L S G ++++F R
Sbjct: 76  CTKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRR 135

Query: 139 VPCRFRG 145
           V C++  
Sbjct: 136 VKCKYPE 142

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score = 68.1 bits (166), Expect = 6e-15
 Identities = 29/166 (17%), Positives = 46/166 (27%), Gaps = 38/166 (22%)

Query: 27  NSRATYYGSPDGLGTPTGACGFG------GYGRNVNDANVAGVSRLWNN------GAGCG 74
            +  T Y          GACG G       +G N      A     +++      G  CG
Sbjct: 16  CASTTNYHDSHK-----GACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCG 70

Query: 75  TCYQVRCTVPEICTDEG-------VSVVVTDY--GEGDDTDFILSPRAYGRMAVADKSEE 125
            C ++  T   +    G        + ++T+       + D+      YG          
Sbjct: 71  QCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELH 130

Query: 126 L-----------YSHGVVDVEFERVPCRFRGYNVMFKVHENSRYPQ 160
           L                 +  +E V C     N   +   NS Y Q
Sbjct: 131 LDLENGRSQVTGMGWNNPETTWEVVNCDSEH-NHDHRTPSNSMYGQ 175

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 95

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 38.6 bits (90), Expect = 6e-05
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 147 NVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQ 182
            V F V + S  P YLA+ + YV+G  DV+AV+I +
Sbjct: 2   KVTFHVEKGSN-PNYLALLVKYVNGDGDVVAVDIKE 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	224
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	100.0
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.97
d1n10a1	95	PHL P 1 C-terminal domain {Timothy grass (Phleum p	99.8
d1whoa_	94	PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 1	99.7
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.56
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	93.08

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=100.00  E-value=2.9e-39  Score=259.57  Aligned_cols=126  Identities=32%  Similarity=0.675  Sum_probs=108.9

Q ss_pred             ccCCCeeeeEEEEeCCCCCCCC--CCCccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEEE
Q 027391           20 YSQYSFTNSRATYYGSPDGLGT--PTGACGFGGYGRNVNDANVAGVS-RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVV   96 (224)
Q Consensus        20 ~~~~~~~~g~aT~Yg~~~g~g~--~~GACGy~~~~~~~~~~~vaAls-~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~V   96 (224)
                      ...++|++|+||||+.+++.++  .+|||||++++..|++.++||+| .+|++|..||+||||+|.++.+|.+++|+|+|
T Consensus        12 ~~~~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~~~~c~~~sv~V~v   91 (143)
T d1n10a2          12 TYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHI   91 (143)
T ss_dssp             BCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEEE
T ss_pred             ccCCCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCCCCcccCCCEEEEE
Confidence            3467999999999999887664  36999999988888999999999 99999999999999999999999999999999


Q ss_pred             ecCCCC--CCCCeeeCHHHHHhhhccccccccccCceeeeEEEEEecCCCC
Q 027391           97 TDYGEG--DDTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCRFRG  145 (224)
Q Consensus        97 tD~Cp~--~~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~~~g  145 (224)
                      ||.||.  +.+|||||+.||.+||+++...+.++.|+|+|+||||+|.++|
T Consensus        92 td~c~~~~~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV~C~~~g  142 (143)
T d1n10a2          92 TDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPE  142 (143)
T ss_dssp             EEECSSCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCT
T ss_pred             EecccCCCCCccccCCHHHHhhhccccchhhheecCccceEEEEEeccCCC
Confidence            999986  4579999999999999987666678999999999999999987

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.97  E-value=7e-33  Score=228.75  Aligned_cols=117  Identities=18%  Similarity=0.269  Sum_probs=97.3

Q ss_pred             CCeeeeEEEEeCCCCCCCCCCCccCCCCCCCC-----CCCceEEEec-cccCC------CCCCCceEEEEeCCCCcc---
Q 027391           23 YSFTNSRATYYGSPDGLGTPTGACGFGGYGRN-----VNDANVAGVS-RLWNN------GAGCGTCYQVRCTVPEIC---   87 (224)
Q Consensus        23 ~~~~~g~aT~Yg~~~g~g~~~GACGy~~~~~~-----~~~~~vaAls-~~~~~------G~~CG~C~eV~c~~~~~C---   87 (224)
                      ..|+.+++|||+++     .+|||||+++..+     +++.++||+| ++|++      |+.||+||||+|++...|   
T Consensus        12 ~g~~~A~aT~Ygd~-----~~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~   86 (180)
T d1wc2a1          12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (180)
T ss_dssp             TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CCccccceEEeCCC-----CCCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccC
Confidence            47999999999976     3699999986432     3468999999 99999      899999999999864322   


Q ss_pred             ----cCCcEEEEEecCCCC-------C--------------CCCeeeCHHHHHhhhccccccccccCceeeeEEEEEecC
Q 027391           88 ----TDEGVSVVVTDYGEG-------D--------------DTDFILSPRAYGRMAVADKSEELYSHGVVDVEFERVPCR  142 (224)
Q Consensus        88 ----~~~sv~V~VtD~Cp~-------~--------------~~~~DLS~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~  142 (224)
                          .+++|+|||||+||.       |              +.||||+ .||.+||       ....|+|+|+||||+|+
T Consensus        87 ~~~~~g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia-------~~~~G~v~V~yrrV~C~  158 (180)
T d1wc2a1          87 GPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVT-------GMGWNNPETTWEVVNCD  158 (180)
T ss_dssp             CCCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTG-------GGTCSSEEEEEEEECHH
T ss_pred             CCCCCCCcEEEEEEecCCCCCCCCCccCCccccccccccCcccceech-HHHHHHh-------hhcCCcceeEEEEeeCC
Confidence                246999999999994       1              1299998 5999999       45789999999999999


Q ss_pred             CCCcceEEEEe
Q 027391          143 FRGYNVMFKVH  153 (224)
Q Consensus       143 ~~g~ni~~~v~  153 (224)
                      ..+ ++++++.
T Consensus       159 ~~g-~~~~~~~  168 (180)
T d1wc2a1         159 SEH-NHDHRTP  168 (180)
T ss_dssp             HHH-HHCTTSC
T ss_pred             Ccc-ccccccc
Confidence            988 8887765

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.80  E-value=5.6e-20  Score=137.12  Aligned_cols=72  Identities=26%  Similarity=0.330  Sum_probs=65.6

Q ss_pred             cceEEEEecCCCCCcEEEEEEEEecCCCCcEEEEEEEcCccCcEEcccccCceeeeccccCC-ccce-EEeecCC
Q 027391          146 YNVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGA-EGLS-RLGADEK  218 (224)
Q Consensus       146 ~ni~~~v~~gS~~~~w~al~v~n~~G~g~I~sVev~~~g~~~W~~l~r~~g~~W~~~~~~~~-~~~~-~~~~~~~  218 (224)
                      .+|+|+|++|| |||||+|+|.|++|.+||.+||||+.++..|++|+|+||++|++++.+.+ ++|+ |+-+++.
T Consensus         1 t~i~F~v~~gs-np~~lav~v~n~~g~gdI~~vevk~~g~~~W~~m~r~~ga~W~~~~~~~~~gpls~Rvt~~~G   74 (95)
T d1n10a1           1 TKVTFHVEKGS-NPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGG   74 (95)
T ss_dssp             CCCEEEECTTC-BTTEEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSCEEEEEEESSS
T ss_pred             CcEEEEECCCC-CcceEEEEEEEcCCCCcEEEEEEEeCCCCcceEEEECCCCeEEECCCCCCCcCEEEEEEEcCC
Confidence            37999999999 89999999999999999999999999877899999999999999987765 4899 9987653

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.70  E-value=1.4e-17  Score=123.57  Aligned_cols=69  Identities=17%  Similarity=0.142  Sum_probs=62.4

Q ss_pred             ceEEEEecCCCCCcEEEEEEEEecCCCCcEEEEEEEcCccCcEEcccccCceeeeccccCCc-cce-EEeecCC
Q 027391          147 NVMFKVHENSRYPQYLAVSMLYVSGQNDVLAVEIWQVITYKLTSKQLIFGPSIACNAFVGAE-GLS-RLGADEK  218 (224)
Q Consensus       147 ni~~~v~~gS~~~~w~al~v~n~~G~g~I~sVev~~~g~~~W~~l~r~~g~~W~~~~~~~~~-~~~-~~~~~~~  218 (224)
                      .|+|+|++|| |||||+++|.|++  ++|..|||+..++.+|++|+|+||++|++++.+.++ +|+ |+.+.+.
T Consensus         3 ~v~f~v~~GS-np~~lav~v~~~g--g~i~~vev~~~gs~~W~~M~r~wGa~W~~~~~~~~~gplsfRvt~~~G   73 (94)
T d1whoa_           3 KVTFTVEKGS-NEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGPFNFRFLTEKG   73 (94)
T ss_dssp             SEEEEECTTC-BTTEEEEEEEETT--CCEEEEEEECTTCCCCEECEECSTTEEEEECSSCCCSSEEEEEEETTS
T ss_pred             cEEEEECCCC-CccEEEEEEEEcC--CCEEEEEEEECCCCceeECccCcCccEEECCCCCCCccEEEEEEEcCC
Confidence            5999999999 8999999999998  599999999988879999999999999999887766 599 9987653

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.56  E-value=2.2e-08  Score=75.07  Aligned_cols=64  Identities=22%  Similarity=0.476  Sum_probs=52.6

Q ss_pred             CCCCCceEEEEeCCCCcccCCcEEEEEecCCCCCCCCeeeC-HHHHHhhhccccccccccCceeeeEEEEEecC
Q 027391           70 GAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEGDDTDFILS-PRAYGRMAVADKSEELYSHGVVDVEFERVPCR  142 (224)
Q Consensus        70 G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~~~~~~DLS-~~AF~~la~~~~~~~~~~~G~i~I~wr~V~C~  142 (224)
                      -..||+|++|+.+.    ++.+++|+|+|+|..  +.|||. +..|.+|-..|.   ....|-+.|.|++|.|.
T Consensus        60 q~sCGkclrvTN~a----tga~~~~RiVDqCsn--gGlDLD~~~vFn~iDtdG~---G~~~Ghl~V~y~fV~C~  124 (125)
T d1bw3a_          60 QAACGKCLRVTNPA----TGAQITARIVDQCAN--GGLDLDWDTVFTKIDTNGI---GYQQGHLNVNYQFVDCR  124 (125)
T ss_dssp             GGGTTCEEEEEETT----TTEEEEEEEEECCSS--SSCCSCSSSSHHHHCSSCH---HHHHSEEEEEEEEECCC
T ss_pred             cccccceEEeeecc----cCcEEEEEEeecccC--CCCccccHhhhheecCCCc---ccccccEEEEEEEecCC
Confidence            36899999999654    367999999999975  588998 779999975432   45678999999999995

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=93.08  E-value=0.028  Score=45.23  Aligned_cols=51  Identities=24%  Similarity=0.324  Sum_probs=33.1

Q ss_pred             EEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEEEecCCCC-CCCCeeeCH
Q 027391           60 VAGVS-RLWNNGAGCGTCYQVRCTVPEICTDEGVSVVVTDYGEG-DDTDFILSP  111 (224)
Q Consensus        60 vaAls-~~~~~G~~CG~C~eV~c~~~~~C~~~sv~V~VtD~Cp~-~~~~~DLS~  111 (224)
                      .||.+ .-......|.+|||++=++.+. .+++.+|+||+.--. ..+||||.-
T Consensus        72 fAA~~~~g~~e~~~Cc~Cy~LtFTs~~~-~GKkMiVQ~tNTGgDlg~n~FDl~i  124 (210)
T d2enga_          72 FAATSIAGSNEAGWCCACYELTFTSGPV-AGKKMVVQSTSTGGDLGSNHFDLNI  124 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGGG-TTCEEEEEEEEC-----CCEEEEEC
T ss_pred             eeeeeecCCCccccccccEEEEeecCCc-CCCEEEEEEeccCCccCCCeeeEec
Confidence            45555 4334446699999999764211 368899999988654 568999853