Citrus Sinensis ID: 027449
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 223 | ||||||
| 449434128 | 362 | PREDICTED: GDSL esterase/lipase EXL3-lik | 0.950 | 0.585 | 0.590 | 4e-68 | |
| 449491298 | 362 | PREDICTED: GDSL esterase/lipase EXL3-lik | 0.950 | 0.585 | 0.586 | 2e-67 | |
| 357517963 | 358 | GDSL esterase/lipase [Medicago truncatul | 0.816 | 0.508 | 0.648 | 1e-64 | |
| 359492765 | 717 | PREDICTED: uncharacterized protein LOC10 | 0.923 | 0.287 | 0.582 | 2e-63 | |
| 356561122 | 366 | PREDICTED: GDSL esterase/lipase EXL3-lik | 0.816 | 0.497 | 0.633 | 3e-63 | |
| 255638106 | 363 | unknown [Glycine max] | 0.946 | 0.581 | 0.568 | 2e-62 | |
| 356553355 | 363 | PREDICTED: GDSL esterase/lipase EXL3-lik | 0.946 | 0.581 | 0.573 | 3e-62 | |
| 388493686 | 364 | unknown [Lotus japonicus] | 0.968 | 0.593 | 0.551 | 3e-62 | |
| 225457889 | 357 | PREDICTED: GDSL esterase/lipase EXL3 [Vi | 0.932 | 0.582 | 0.576 | 6e-62 | |
| 363807102 | 366 | uncharacterized protein LOC100810354 [Gl | 0.950 | 0.579 | 0.556 | 8e-62 |
| >gi|449434128|ref|XP_004134848.1| PREDICTED: GDSL esterase/lipase EXL3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 154/215 (71%), Gaps = 3/215 (1%)
Query: 11 LSTPSFSIIIFFFLLFIYFSENGDGATQN---KNESVPAVFVFGDSIADPGNNNNIKTII 67
+ P++ F F+L + F G A +NE V A+ VFGDSI DPGNNN +KT++
Sbjct: 1 MKIPNYLDFFFCFILLLCFCHAGAAARSKFLPENEEVSAIIVFGDSIVDPGNNNYLKTLV 60
Query: 68 KCNFPPYGRDFKGKIATGRFSNGVIPSDLIAQEFGIKELLPAYLDPNLKPQDLVTGVSFA 127
KCNFPPYGRDF G I TGRFSNG IP+D +A+EFG+KEL+PAYLDP+L QDL+TGVSFA
Sbjct: 61 KCNFPPYGRDFNGGIPTGRFSNGKIPTDFVAEEFGVKELVPAYLDPHLTTQDLLTGVSFA 120
Query: 128 SGGAGYDPLTSKVASALSMSDQLDLFKKALETIKATAGEEATANILSKGLFMVVSGSDDI 187
SG +GYDPLTSK+ S LS+SDQL+LFK ++ IKA GEE ILSK + +V +GSDDI
Sbjct: 121 SGASGYDPLTSKITSVLSLSDQLELFKDYIKKIKAAVGEEKATAILSKSVIIVCTGSDDI 180
Query: 188 ANTYLSTPFRRGQYDINSYTDLTASSALSFLQVCY 222
ANTY TPFRR YD+ SYTDL S SF Y
Sbjct: 181 ANTYFITPFRRFHYDVASYTDLMLQSGSSFFHQLY 215
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449491298|ref|XP_004158854.1| PREDICTED: GDSL esterase/lipase EXL3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357517963|ref|XP_003629270.1| GDSL esterase/lipase [Medicago truncatula] gi|355523292|gb|AET03746.1| GDSL esterase/lipase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|359492765|ref|XP_002270631.2| PREDICTED: uncharacterized protein LOC100264374 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356561122|ref|XP_003548834.1| PREDICTED: GDSL esterase/lipase EXL3-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255638106|gb|ACU19367.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356553355|ref|XP_003545022.1| PREDICTED: GDSL esterase/lipase EXL3-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|388493686|gb|AFK34909.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|225457889|ref|XP_002270500.1| PREDICTED: GDSL esterase/lipase EXL3 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|363807102|ref|NP_001242335.1| uncharacterized protein LOC100810354 [Glycine max] gi|255638862|gb|ACU19734.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 223 | ||||||
| TAIR|locus:2827016 | 349 | AT1G59030 "AT1G59030" [Arabido | 0.820 | 0.524 | 0.5 | 1.9e-44 | |
| TAIR|locus:2826998 | 349 | AT1G59406 "AT1G59406" [Arabido | 0.820 | 0.524 | 0.5 | 1.9e-44 | |
| TAIR|locus:2198666 | 402 | AT1G20120 "AT1G20120" [Arabido | 0.816 | 0.452 | 0.510 | 8.1e-44 | |
| TAIR|locus:2079849 | 320 | AT3G43570 "AT3G43570" [Arabido | 0.802 | 0.559 | 0.5 | 1.3e-43 | |
| TAIR|locus:2204324 | 364 | AT1G75900 "AT1G75900" [Arabido | 0.798 | 0.489 | 0.497 | 2.2e-43 | |
| TAIR|locus:2098209 | 288 | AT3G43550 "AT3G43550" [Arabido | 0.802 | 0.621 | 0.5 | 3.5e-43 | |
| TAIR|locus:2204420 | 375 | AT1G75880 "AT1G75880" [Arabido | 0.820 | 0.488 | 0.489 | 7.3e-43 | |
| TAIR|locus:2099387 | 351 | AT3G14820 "AT3G14820" [Arabido | 0.811 | 0.515 | 0.505 | 8.4e-42 | |
| TAIR|locus:2165810 | 369 | AT5G42170 "AT5G42170" [Arabido | 0.798 | 0.482 | 0.486 | 1.7e-41 | |
| TAIR|locus:2198636 | 534 | AT1G20130 [Arabidopsis thalian | 0.820 | 0.342 | 0.461 | 2.8e-41 |
| TAIR|locus:2827016 AT1G59030 "AT1G59030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 93/186 (50%), Positives = 126/186 (67%)
Query: 34 DGATQNKNESVPAVFVFGDSIADPGXXXXXXXXXXXXFPPYGRDFKGKIATGRFSNGVIP 93
+ ATQ KN ++PA+ VFGDSI D G FPPYG+D+ G ATGRFS+G +P
Sbjct: 18 NAATQGKNTTIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVP 77
Query: 94 SDLIAQEFGIKELLPAYLDPNLKPQDLVTGVSFASGGAGYDPLTSKVASALSMSDQLDLF 153
SDLIA++ G+ + LPAY++P LKP+DL+ GV+FASGG GYDPLT+K+ S +S+ DQL F
Sbjct: 78 SDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLINF 137
Query: 154 KKALETIKATAGEEATANILSKGLFMVVSGSDDIANTYLSTPFRRGQYDINSYTDLTASS 213
K+ + IK GEE +IL F+VVS S+D+A+TYL+ R YD SY + A S
Sbjct: 138 KEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQTHR---YDRTSYANFLADS 194
Query: 214 ALSFLQ 219
A+ F++
Sbjct: 195 AVHFVR 200
|
|
| TAIR|locus:2826998 AT1G59406 "AT1G59406" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2198666 AT1G20120 "AT1G20120" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2079849 AT3G43570 "AT3G43570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2204324 AT1G75900 "AT1G75900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2098209 AT3G43550 "AT3G43550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2204420 AT1G75880 "AT1G75880" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099387 AT3G14820 "AT3G14820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2165810 AT5G42170 "AT5G42170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2198636 AT1G20130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00014370001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (359 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 223 | |||
| cd01837 | 315 | cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase | 2e-70 | |
| PLN03156 | 351 | PLN03156, PLN03156, GDSL esterase/lipase; Provisio | 2e-54 | |
| cd01846 | 270 | cd01846, fatty_acyltransferase_like, Fatty acyltra | 9e-05 |
| >gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Score = 217 bits (554), Expect = 2e-70
Identities = 86/178 (48%), Positives = 114/178 (64%), Gaps = 4/178 (2%)
Query: 45 PAVFVFGDSIADPGNNNNIKTIIKCNFPPYGRDFKGKIATGRFSNGVIPSDLIAQEFGIK 104
PA+FVFGDS+ D GNNN + T+ K NFPPYG DF G+ TGRFSNG + D IA+ G+
Sbjct: 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGR-PTGRFSNGRLIIDFIAEALGLP 59
Query: 105 ELLPAYLDPNLKPQDLVTGVSFASGGAGYDPLTSKVASALSMSDQLDLFKKALETIKATA 164
L P YL PN D +TGV+FASGGAG T + S +S+S QL+ FK+ E ++A
Sbjct: 60 LLPPPYLSPNGS-SDFLTGVNFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALV 118
Query: 165 GEEATANILSKGLFMVVSGSDDIANTYLSTPFRRGQYDINSYTDLTASSALSFLQVCY 222
GEEA A+ILSK LF++ GS+D N Y + P R QY++ +Y S+ S ++ Y
Sbjct: 119 GEEAAADILSKSLFLISIGSNDYLNNYFANPTR--QYEVEAYVPFLVSNISSAIKRLY 174
|
The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315 |
| >gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 223 | |||
| PLN03156 | 351 | GDSL esterase/lipase; Provisional | 100.0 | |
| cd01837 | 315 | SGNH_plant_lipase_like SGNH_plant_lipase_like, a p | 100.0 | |
| cd01847 | 281 | Triacylglycerol_lipase_like Triacylglycerol lipase | 99.97 | |
| PRK15381 | 408 | pathogenicity island 2 effector protein SseJ; Prov | 99.97 | |
| cd01846 | 270 | fatty_acyltransferase_like Fatty acyltransferase-l | 99.93 | |
| COG3240 | 370 | Phospholipase/lecithinase/hemolysin [Lipid metabol | 99.2 | |
| PF00657 | 234 | Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter | 99.1 | |
| cd01839 | 208 | SGNH_arylesterase_like SGNH_hydrolase subfamily, s | 96.72 | |
| cd01823 | 259 | SEST_like SEST_like. A family of secreted SGNH-hyd | 96.05 | |
| cd01832 | 185 | SGNH_hydrolase_like_1 Members of the SGNH-hydrolas | 95.91 | |
| cd01824 | 288 | Phospholipase_B_like Phospholipase-B_like. This su | 94.58 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 94.57 | |
| cd01844 | 177 | SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG | 94.45 | |
| cd04501 | 183 | SGNH_hydrolase_like_4 Members of the SGNH-hydrolas | 94.14 | |
| cd01830 | 204 | XynE_like SGNH_hydrolase subfamily, similar to the | 94.06 | |
| cd01825 | 189 | SGNH_hydrolase_peri1 SGNH_peri1; putative periplas | 93.71 | |
| cd01831 | 169 | Endoglucanase_E_like Endoglucanase E-like members | 93.42 | |
| cd01822 | 177 | Lysophospholipase_L1_like Lysophospholipase L1-lik | 93.28 | |
| PF13472 | 179 | Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami | 93.22 | |
| KOG3670 | 397 | consensus Phospholipase [Lipid transport and metab | 93.2 | |
| PRK10528 | 191 | multifunctional acyl-CoA thioesterase I and protea | 92.69 | |
| cd01836 | 191 | FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee | 92.04 | |
| cd01835 | 193 | SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG | 90.79 | |
| cd01821 | 198 | Rhamnogalacturan_acetylesterase_like Rhamnogalactu | 90.37 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 89.81 | |
| COG2755 | 216 | TesA Lysophospholipase L1 and related esterases [A | 81.89 |
| >PLN03156 GDSL esterase/lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-48 Score=348.02 Aligned_cols=182 Identities=44% Similarity=0.784 Sum_probs=155.0
Q ss_pred CCCCEEEEeCCchhhcCCCCCcccccccCCCCCCCCCCCCCCcccCCCCChhHHHHHHHhCCCCCCCCcCCCCCCCCCCC
Q 027449 42 ESVPAVFVFGDSIADPGNNNNIKTIIKCNFPPYGRDFKGKIATGRFSNGVIPSDLIAQEFGIKELLPAYLDPNLKPQDLV 121 (223)
Q Consensus 42 ~~~~~lfvFGDSlsDtGn~~~~~~~~~~~~~PyG~~~~~~~ptGRfSnG~~~~D~la~~lgl~~~~ppyl~~~~~~~~~~ 121 (223)
..+++|||||||++|+||++++.+..+++++|||++||+++|||||||||+|+||||+.||+++++|||+++..+..++.
T Consensus 25 ~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~~ 104 (351)
T PLN03156 25 AKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDFA 104 (351)
T ss_pred CCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchhhc
Confidence 45899999999999999998876556788999999999878999999999999999999999448999998765566899
Q ss_pred CcceeeeecCCcCCCCCccccCCCHHHHHHHHHHHHHHHHHhhChHHHhhhhcCcEEEEEeccchhhhhhccCCCCCCcc
Q 027449 122 TGVSFASGGAGYDPLTSKVASALSMSDQLDLFKKALETIKATAGEEATANILSKGLFMVVSGSDDIANTYLSTPFRRGQY 201 (223)
Q Consensus 122 ~G~NFA~gGA~~~~~~~~~~~~~sl~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sLf~i~iG~NDy~~~~~~~~~~~~~~ 201 (223)
+|+|||+||+++++.+......++|..||+||+++++++....|.+.+++.++++||+||||+|||+.+|+..+......
T Consensus 105 ~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~~ 184 (351)
T PLN03156 105 TGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPGRRSQY 184 (351)
T ss_pred ccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhccccccccC
Confidence 99999999999987665333467899999999999998887777766778899999999999999987665322222334
Q ss_pred ChhhHHHHHHHHHHHHHHHHhC
Q 027449 202 DINSYTDLTASSALSFLQVCYI 223 (223)
Q Consensus 202 ~~~~~v~~vv~~i~~~i~~LY~ 223 (223)
++++|++.|++.+++.|++||+
T Consensus 185 ~~~~~~~~lv~~~~~~i~~Ly~ 206 (351)
T PLN03156 185 TVSQYQDFLIGIAENFVKKLYR 206 (351)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999984
|
|
| >cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >PRK15381 pathogenicity island 2 effector protein SseJ; Provisional | Back alignment and domain information |
|---|
| >cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] | Back alignment and domain information |
|---|
| >cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A | Back alignment and domain information |
|---|
| >cd01823 SEST_like SEST_like | Back alignment and domain information |
|---|
| >cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01824 Phospholipase_B_like Phospholipase-B_like | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE | Back alignment and domain information |
|---|
| >cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans | Back alignment and domain information |
|---|
| >cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
| >PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A | Back alignment and domain information |
|---|
| >KOG3670 consensus Phospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional | Back alignment and domain information |
|---|
| >cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases | Back alignment and domain information |
|---|
| >cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 223 | |||
| 3kvn_X | 632 | Esterase ESTA; beta barrel, alpha-beta-alpha motif | 2e-40 |
| >3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 | Back alignment and structure |
|---|
Score = 145 bits (366), Expect = 2e-40
Identities = 27/162 (16%), Positives = 45/162 (27%), Gaps = 1/162 (0%)
Query: 41 NESVPAVFVFGDSIADPGNNNNIKTIIKCNFPPYGRDFKGKIATGRFSNGVIPSDLIAQE 100
+ VFGDS++D G + R G L+ +
Sbjct: 12 PSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQ 71
Query: 101 FGIK-ELLPAYLDPNLKPQDLVTGVSFASGGAGYDPLTSKVASALSMSDQLDLFKKALET 159
GI L A P Q + G ++A GG D + + +A + D
Sbjct: 72 LGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRD 131
Query: 160 IKATAGEEATANILSKGLFMVVSGSDDIANTYLSTPFRRGQY 201
L+ + G +D + + Q
Sbjct: 132 GYLVDRARQGLGADPNALYYITGGGNDFLQGRILNDVQAQQA 173
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 223 | |||
| 3kvn_X | 632 | Esterase ESTA; beta barrel, alpha-beta-alpha motif | 99.97 | |
| 2q0q_A | 216 | ARYL esterase; SGNH hydrolase, oligomeric enzyme, | 97.52 | |
| 3dci_A | 232 | Arylesterase; SGNH_hydrolase SUBF structural genom | 97.52 | |
| 3mil_A | 240 | Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola | 97.3 | |
| 3rjt_A | 216 | Lipolytic protein G-D-S-L family; PSI-biology, mid | 97.2 | |
| 3dc7_A | 232 | Putative uncharacterized protein LP_3323; NESG LPR | 96.06 | |
| 1ivn_A | 190 | Thioesterase I; hydrolase, protease; 1.90A {Escher | 95.76 | |
| 3bzw_A | 274 | Putative lipase; protein structure initiative II, | 95.38 | |
| 3skv_A | 385 | SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr | 94.68 | |
| 3hp4_A | 185 | GDSL-esterase; psychrotrophic, monoethylphosphonat | 94.39 | |
| 2w9x_A | 366 | AXE2A, CJCE2B, putative acetyl xylan esterase; car | 93.65 | |
| 2vpt_A | 215 | Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos | 93.02 | |
| 1k7c_A | 233 | Rhamnogalacturonan acetylesterase; N-linked glycos | 92.97 | |
| 1esc_A | 306 | Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. | 92.42 | |
| 1vjg_A | 218 | Putative lipase from the G-D-S-L family; structura | 92.05 | |
| 2o14_A | 375 | Hypothetical protein YXIM; NESG, X-RAY, SR595, str | 91.98 | |
| 2wao_A | 341 | Endoglucanase E; plant cell WALL degradation, carb | 91.68 | |
| 1yzf_A | 195 | Lipase/acylhydrolase; structural GENO PSI, protein | 90.52 | |
| 2waa_A | 347 | Acetyl esterase, xylan esterase, putative, AXE2C; | 87.45 |
| >3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-33 Score=266.82 Aligned_cols=166 Identities=18% Similarity=0.204 Sum_probs=122.2
Q ss_pred CCCCCCCEEEEeCCchhhcCCCCCccccc----ccCCCCCCCCCCCCCCcccCC-CCChhHHHHHHHhCCCC-CCCCcCC
Q 027449 39 NKNESVPAVFVFGDSIADPGNNNNIKTII----KCNFPPYGRDFKGKIATGRFS-NGVIPSDLIAQEFGIKE-LLPAYLD 112 (223)
Q Consensus 39 ~~~~~~~~lfvFGDSlsDtGn~~~~~~~~----~~~~~PyG~~~~~~~ptGRfS-nG~~~~D~la~~lgl~~-~~ppyl~ 112 (223)
..+++|++||+||||+|||||........ +...+| |.+|+ +|||| |||+|+||||+.||+|+ +++||+.
T Consensus 10 ~~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~-g~~~~----~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~ 84 (632)
T 3kvn_X 10 EAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRV-GPTYQ----NGSGEIFGPTAPMLLGNQLGIAPGDLAASTS 84 (632)
T ss_dssp SCCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBC-SSSCC----TTSSCCBCCCHHHHHHHHTTCCGGGGSBSSC
T ss_pred cCCCCCccEEEEccccccCCCcccccCCcCCccccccCC-CCccc----cCcccccCCchHHHHHHHcCCCccccCcccc
Confidence 45678999999999999999985442111 111223 77774 79999 99999999999999983 3566665
Q ss_pred CCCCCCCCCCcceeeeecCCc---CCC-CCccccCCCHHHHHHHHH-HHHHHHHHhhChHHHhhhhcCcEEEEEeccchh
Q 027449 113 PNLKPQDLVTGVSFASGGAGY---DPL-TSKVASALSMSDQLDLFK-KALETIKATAGEEATANILSKGLFMVVSGSDDI 187 (223)
Q Consensus 113 ~~~~~~~~~~G~NFA~gGA~~---~~~-~~~~~~~~sl~~Qv~~F~-~~~~~l~~~~g~~~~~~~~~~sLf~i~iG~NDy 187 (223)
+...+.++.+|+|||+|||++ ++. +.....+++|..|+++|. ++++++.. .+.+.++++||+||||+|||
T Consensus 85 ~~~~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~-----~~~~~~~~sL~~v~iG~ND~ 159 (632)
T 3kvn_X 85 PVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRAR-----QGLGADPNALYYITGGGNDF 159 (632)
T ss_dssp HHHHHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHT-----TTCCCCTTSEEEECCSHHHH
T ss_pred ccccccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhh-----ccCccCCCCEEEEEEechhh
Confidence 321246789999999999996 222 222234677888888776 56554422 23467899999999999999
Q ss_pred hhhhccCCCCCCccChhhHHHHHHHHHHHHHHHHhC
Q 027449 188 ANTYLSTPFRRGQYDINSYTDLTASSALSFLQVCYI 223 (223)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~LY~ 223 (223)
++.|+. ..++++.+|+++..+|++||+
T Consensus 160 ~~~~~~---------~~~~~~~~v~~~~~~v~~L~~ 186 (632)
T 3kvn_X 160 LQGRIL---------NDVQAQQAAGRLVDSVQALQQ 186 (632)
T ss_dssp HTTCCC---------SHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccc---------ChHHHHHHHHHHHHHHHHHHH
Confidence 876542 136899999999999999984
|
| >2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* | Back alignment and structure |
|---|
| >3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 | Back alignment and structure |
|---|
| >1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* | Back alignment and structure |
|---|
| >3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 | Back alignment and structure |
|---|
| >3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} | Back alignment and structure |
|---|
| >3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 | Back alignment and structure |
|---|
| >2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} | Back alignment and structure |
|---|
| >2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* | Back alignment and structure |
|---|
| >1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A | Back alignment and structure |
|---|
| >1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A | Back alignment and structure |
|---|
| >2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 | Back alignment and structure |
|---|
| >2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* | Back alignment and structure |
|---|
| >1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 | Back alignment and structure |
|---|
| >2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 223 | |||
| d1esca_ | 302 | Esterase {Streptomyces scabies [TaxId: 1930]} | 97.68 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 97.33 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.83 | |
| d1k7ca_ | 233 | Rhamnogalacturonan acetylesterase {Fungus (Aspergi | 96.35 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 95.29 | |
| d1yzfa1 | 195 | Lipase/acylhydrolase {Enterococcus faecalis [TaxId | 92.87 | |
| d1jrla_ | 179 | Thioesterase I, TAP {Escherichia coli [TaxId: 562] | 91.64 |
| >d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: Esterase domain: Esterase species: Streptomyces scabies [TaxId: 1930]
Probab=97.68 E-value=4.7e-06 Score=68.59 Aligned_cols=70 Identities=16% Similarity=0.090 Sum_probs=42.0
Q ss_pred CChhHHHHHHHhCCCCCCCCcCCCCCCCCCCCCcceeeeecCCcCCCCCcc---ccCCCHHHHHHHHHHHHHHHHHhhCh
Q 027449 90 GVIPSDLIAQEFGIKELLPAYLDPNLKPQDLVTGVSFASGGAGYDPLTSKV---ASALSMSDQLDLFKKALETIKATAGE 166 (223)
Q Consensus 90 G~~~~D~la~~lgl~~~~ppyl~~~~~~~~~~~G~NFA~gGA~~~~~~~~~---~~~~sl~~Qv~~F~~~~~~l~~~~g~ 166 (223)
+..|++++|+.|+... .. ...=.|+|.+|+++.+..... ........|++..
T Consensus 35 ~~~y~~~la~~l~~~~-~~-----------~~~~~n~a~sGatt~~~~~~~~~~~~~~~~~~Q~~~l------------- 89 (302)
T d1esca_ 35 KENYPAVATRSLADKG-IT-----------LDVQADVSCGGALIHHFWEKQELPFGAGELPPQQDAL------------- 89 (302)
T ss_dssp TTCHHHHHHHHHHTTT-CE-----------EEEEEECCCTTCCGGGGTSCEECGGGCCEECCGGGGC-------------
T ss_pred CcCHHHHHHHHhcccc-CC-----------ceeEEEeeecccchhhhhccccccccccchhhhhhhc-------------
Confidence 6789999999998751 11 112369999999975433211 0111222243311
Q ss_pred HHHhhhhcCcEEEEEeccchhhh
Q 027449 167 EATANILSKGLFMVVSGSDDIAN 189 (223)
Q Consensus 167 ~~~~~~~~~sLf~i~iG~NDy~~ 189 (223)
.-...|+.|+||+||+..
T Consensus 90 -----~~~~dlVtl~iGgND~~~ 107 (302)
T d1esca_ 90 -----KQDTQLTVGSLGGNTLGF 107 (302)
T ss_dssp -----CTTCCEEEECCCHHHHTH
T ss_pred -----cCCCCEEEEecCCcccch
Confidence 113469999999999853
|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|