Citrus Sinensis ID: 027460

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
MSDFFFVAFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQPPSDQQSKLASSSAGTESN
ccHHHHHHHHcccccccccccccccEEEEEEEccEEEEEEccccEEEEEEccEEEEcccccccccHHHHHHHHHcccEEEccccccEEHHHHHccccccccccccccccccEEccccEEEEEccccccEEEEEccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccccEEEEEEccccccccccccccccccccccccccccccccc
ccccHEEHHcccccccccccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEEcccccccccHHHHHHHHHcccEEEcccccccHHHHHHHccHcccccccccHcHcEEcccccEEEEEEcccccEEEEEEcccHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccEEEEEEEccccccccHHHHHcccHHcccccccccHHHccc
MSDFFFVAFlegphsdfhgptsgstACVAIIRDKQLVVANAGDSRCVLSRkgqalnlskdhkpdleVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFklnkslpaekqivtanpdistielcdddeflVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVfdrclapsaggegcdnMTMILVQFKnasnngpsaaeqppsdqqsklasssagtesn
MSDFFFVAFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSrkgqalnlskdhkpdleVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAaeqppsdqqsklasssagtesn
MSDFFFVAFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQPPSDQQSKLASSSAGTESN
***FFFVAFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSR****************VEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF********************************
*SDFFFVAFLEGPHS****PTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF********************************
MSDFFFVAFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASN***************************
**DFFFVAFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNA*****************************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSDFFFVAFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQPPSDQQSKLASSSAGTESN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query223 2.2.26 [Sep-21-2011]
Q9SZ53357 Probable protein phosphat yes no 0.905 0.565 0.742 5e-89
O81716355 Probable protein phosphat no no 0.874 0.549 0.741 2e-85
Q67UP9368 Probable protein phosphat yes no 0.910 0.551 0.703 5e-85
Q6ETK3362 Probable protein phosphat no no 0.829 0.511 0.747 1e-82
Q653S3362 Probable protein phosphat no no 0.860 0.530 0.682 1e-77
Q7K4Q5662 Probable protein phosphat yes no 0.937 0.315 0.493 7e-54
P79126543 Protein phosphatase 1G OS yes no 0.950 0.390 0.504 1e-52
Q4R4V2547 Protein phosphatase 1G OS N/A no 0.950 0.387 0.5 2e-52
O15355546 Protein phosphatase 1G OS yes no 0.950 0.388 0.5 2e-52
Q61074542 Protein phosphatase 1G OS yes no 0.834 0.343 0.532 1e-51
>sp|Q9SZ53|P2C60_ARATH Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1 Back     alignment and function desciption
 Score =  327 bits (837), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 153/206 (74%), Positives = 180/206 (87%), Gaps = 4/206 (1%)

Query: 8   AFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEV 67
           AF EGPHSDF GP SGSTACVA++RDKQL VANAGDSRCV+SRK QA NLS+DHKPDLE 
Sbjct: 145 AFEEGPHSDFAGPNSGSTACVAVVRDKQLFVANAGDSRCVISRKNQAYNLSRDHKPDLEA 204

Query: 68  EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDD 127
           EK+RILKAGGFI  GRVNGSLNL+RAIGD+EFK NK LP+EKQIVTA+PD++T+ELCDDD
Sbjct: 205 EKERILKAGGFIHAGRVNGSLNLSRAIGDMEFKQNKFLPSEKQIVTASPDVNTVELCDDD 264

Query: 128 EFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAP-SAGGEGCDNMTM 186
           +FLV+ACDGIWDC++SQ+LVDF+ +QL +ETKLSV+CEKV DRCLAP ++GGEGCDNMTM
Sbjct: 265 DFLVLACDGIWDCMTSQQLVDFIHEQLNSETKLSVVCEKVLDRCLAPNTSGGEGCDNMTM 324

Query: 187 ILVQFKNASNNGPSAAEQPPSDQQSK 212
           ILV+FKN +   PS  E  P   Q++
Sbjct: 325 ILVRFKNPT---PSETELKPEASQAE 347

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|O81716|P2C21_ARATH Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1 Back     alignment and function description
>sp|Q67UP9|P2C58_ORYSJ Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1 Back     alignment and function description
>sp|Q6ETK3|P2C11_ORYSJ Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1 Back     alignment and function description
>sp|Q653S3|P2C70_ORYSJ Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2 Back     alignment and function description
>sp|Q7K4Q5|Y0417_DROME Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1 Back     alignment and function description
>sp|P79126|PPM1G_BOVIN Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2 Back     alignment and function description
>sp|Q4R4V2|PPM1G_MACFA Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1 Back     alignment and function description
>sp|O15355|PPM1G_HUMAN Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1 Back     alignment and function description
>sp|Q61074|PPM1G_MOUSE Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query223
449509167309 PREDICTED: probable protein phosphatase 0.883 0.637 0.802 7e-94
449436193285 PREDICTED: probable protein phosphatase 0.883 0.691 0.802 9e-94
356523193 363 PREDICTED: probable protein phosphatase 0.955 0.586 0.767 4e-92
217074612 364 unknown [Medicago truncatula] gi|3885180 0.968 0.593 0.754 5e-92
356526280 363 PREDICTED: probable protein phosphatase 0.955 0.586 0.762 6e-92
356526282 368 PREDICTED: probable protein phosphatase 0.955 0.578 0.762 8e-92
357465993 362 hypothetical protein MTR_3g105880 [Medic 0.905 0.558 0.768 2e-89
357465999 362 hypothetical protein MTR_3g105880 [Medic 0.905 0.558 0.768 2e-89
224075718 359 predicted protein [Populus trichocarpa] 0.928 0.576 0.75 3e-89
357465995 334 hypothetical protein MTR_3g105880 [Medic 0.905 0.604 0.768 3e-89
>gi|449509167|ref|XP_004163515.1| PREDICTED: probable protein phosphatase 2C 60-like, partial [Cucumis sativus] Back     alignment and taxonomy information
 Score =  348 bits (894), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 163/203 (80%), Positives = 186/203 (91%), Gaps = 6/203 (2%)

Query: 11  EGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKD 70
           EGPHSDFHGP +GSTACVAIIR+ QLVVANAGDSRCV+SRKGQA NLSKDHKPDLEVEKD
Sbjct: 90  EGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKD 149

Query: 71  RILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFL 130
           RILKAGGFI+VGRVNGSLNLARAIGD+EFK NKS+PAEKQIVTANPDI+T+ELC+DDEFL
Sbjct: 150 RILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDITTVELCEDDEFL 209

Query: 131 VIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQ 190
           V+ACDGIWDC+SSQ+LVD++ DQL +E++LSVICE+VFDRCLAP+AGGEGCDNMTMILVQ
Sbjct: 210 VLACDGIWDCMSSQQLVDYIGDQLKSESRLSVICERVFDRCLAPTAGGEGCDNMTMILVQ 269

Query: 191 FKNASNN------GPSAAEQPPS 207
           FK   +N        ++AE+PPS
Sbjct: 270 FKKPFSNPENLNAASTSAEEPPS 292

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449436193|ref|XP_004135878.1| PREDICTED: probable protein phosphatase 2C 60-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356523193|ref|XP_003530226.1| PREDICTED: probable protein phosphatase 2C 60-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|217074612|gb|ACJ85666.1| unknown [Medicago truncatula] gi|388518067|gb|AFK47095.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356526280|ref|XP_003531746.1| PREDICTED: probable protein phosphatase 2C 60 isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356526282|ref|XP_003531747.1| PREDICTED: probable protein phosphatase 2C 60 isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|357465993|ref|XP_003603281.1| hypothetical protein MTR_3g105880 [Medicago truncatula] gi|355492329|gb|AES73532.1| hypothetical protein MTR_3g105880 [Medicago truncatula] gi|388521645|gb|AFK48884.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357465999|ref|XP_003603284.1| hypothetical protein MTR_3g105880 [Medicago truncatula] gi|355492332|gb|AES73535.1| hypothetical protein MTR_3g105880 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224075718|ref|XP_002304734.1| predicted protein [Populus trichocarpa] gi|222842166|gb|EEE79713.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357465995|ref|XP_003603282.1| hypothetical protein MTR_3g105880 [Medicago truncatula] gi|355492330|gb|AES73533.1| hypothetical protein MTR_3g105880 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query223
TAIR|locus:2116777357 AT4G31860 [Arabidopsis thalian 0.905 0.565 0.742 4.5e-82
TAIR|locus:2047344355 AT2G25070 [Arabidopsis thalian 0.919 0.577 0.725 4.7e-80
FB|FBgn0033021662 CG10417 [Drosophila melanogast 0.937 0.315 0.493 2.4e-51
UNIPROTKB|P79126543 PPM1G "Protein phosphatase 1G" 0.896 0.368 0.518 7.4e-50
UNIPROTKB|E2RFB4544 PPM1G "Uncharacterized protein 0.896 0.367 0.513 1.5e-49
UNIPROTKB|O15355546 PPM1G "Protein phosphatase 1G" 0.896 0.366 0.513 2.5e-49
UNIPROTKB|I3LTN6545 PPM1G "Uncharacterized protein 0.896 0.366 0.509 3.2e-49
RGD|628676542 Ppm1g "protein phosphatase, Mg 0.896 0.369 0.509 6.7e-49
MGI|MGI:106065542 Ppm1g "protein phosphatase 1G 0.914 0.376 0.5 2.9e-48
ASPGD|ASPL0000056464420 AN1358 [Emericella nidulans (t 0.825 0.438 0.563 9.8e-48
TAIR|locus:2116777 AT4G31860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
 Identities = 153/206 (74%), Positives = 180/206 (87%)

Query:     8 AFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEV 67
             AF EGPHSDF GP SGSTACVA++RDKQL VANAGDSRCV+SRK QA NLS+DHKPDLE 
Sbjct:   145 AFEEGPHSDFAGPNSGSTACVAVVRDKQLFVANAGDSRCVISRKNQAYNLSRDHKPDLEA 204

Query:    68 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDD 127
             EK+RILKAGGFI  GRVNGSLNL+RAIGD+EFK NK LP+EKQIVTA+PD++T+ELCDDD
Sbjct:   205 EKERILKAGGFIHAGRVNGSLNLSRAIGDMEFKQNKFLPSEKQIVTASPDVNTVELCDDD 264

Query:   128 EFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPS-AGGEGCDNMTM 186
             +FLV+ACDGIWDC++SQ+LVDF+ +QL +ETKLSV+CEKV DRCLAP+ +GGEGCDNMTM
Sbjct:   265 DFLVLACDGIWDCMTSQQLVDFIHEQLNSETKLSVVCEKVLDRCLAPNTSGGEGCDNMTM 324

Query:   187 ILVQFKNASNNGPSAAEQPPSDQQSK 212
             ILV+FKN +   PS  E  P   Q++
Sbjct:   325 ILVRFKNPT---PSETELKPEASQAE 347
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009610 "response to symbiotic fungus" evidence=RCA
GO:0016036 "cellular response to phosphate starvation" evidence=RCA
GO:0019375 "galactolipid biosynthetic process" evidence=RCA
GO:0042631 "cellular response to water deprivation" evidence=RCA
TAIR|locus:2047344 AT2G25070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0033021 CG10417 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P79126 PPM1G "Protein phosphatase 1G" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RFB4 PPM1G "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O15355 PPM1G "Protein phosphatase 1G" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|I3LTN6 PPM1G "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|628676 Ppm1g "protein phosphatase, Mg2+/Mn2+ dependent, 1G" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:106065 Ppm1g "protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ASPGD|ASPL0000056464 AN1358 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SZ53P2C60_ARATH3, ., 1, ., 3, ., 1, 60.74270.90580.5658yesno
Q67UP9P2C58_ORYSJ3, ., 1, ., 3, ., 1, 60.70380.91030.5516yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.824
3rd Layer3.1.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00031531
hypothetical protein (359 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query223
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 3e-68
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-63
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 2e-59
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 8e-39
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-34
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 7e-33
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  209 bits (535), Expect = 3e-68
 Identities = 77/184 (41%), Positives = 111/184 (60%), Gaps = 14/184 (7%)

Query: 8   AFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEV 67
             LE    +     SG+TA VA+IR  +L VAN GDSR VL R G+A+ L+KDHKP  E 
Sbjct: 85  EILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEE 144

Query: 68  EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDD 127
           E++RI KAGG +  GRV G L + RA+GD +          K  V+A PD++ ++L +DD
Sbjct: 145 ERERIEKAGGRVSNGRVPGVLAVTRALGDFDL---------KPGVSAEPDVTVVKLTEDD 195

Query: 128 EFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMI 187
           +FL++A DG+WD LS+QE VD VR +L  +  L    +++ D  L         DN+T++
Sbjct: 196 DFLILASDGLWDVLSNQEAVDIVRSEL-AKEDLQEAAQELVDLALRRG----SHDNITVV 250

Query: 188 LVQF 191
           +V+ 
Sbjct: 251 VVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 223
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 99.97
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.96
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.96
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.96
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.91
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.79
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.73
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.47
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.34
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.32
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.31
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.34
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.7e-38  Score=274.32  Aligned_cols=170  Identities=40%  Similarity=0.711  Sum_probs=152.3

Q ss_pred             CCCCcceEEEEEEECCeEEEEEeccccEEEEeCCeeeeCCCCCCCCcHHHHHHHHHhCCeEeecccCCccccccccCChh
Q 027460           19 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVE   98 (223)
Q Consensus        19 ~~~~GsT~~~~~i~~~~l~i~~vGDSr~~l~~~~~~~~lt~dH~~~~~~e~~ri~~~~~~~~~~r~~~~~~ltr~lG~~~   98 (223)
                      ...||||++++++.++++|++|+||||+|+++++++++||+||++.++.|++||...|+.+...++++.+++||+|||..
T Consensus       163 ~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~~g~v~g~l~vTRalGD~~  242 (365)
T PLN03145        163 SLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVYDGYLNGQLNVARALGDWH  242 (365)
T ss_pred             CCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCceecceECCcccccccccccc
Confidence            34599999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             hhhcCCCCcccceeeecCcceEEEecCCCeEEEEEcCCCccCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhcCCCCC
Q 027460           99 FKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGG  178 (223)
Q Consensus        99 ~k~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGl~d~l~~~~i~~~v~~~~~~~~~~~~~a~~l~~~a~~~~~~~  178 (223)
                      +|....  .....++++|++..+++.++|.|||||||||||+++++++.+++.+.+....++.++|+.|++.|+.    +
T Consensus       243 ~k~~k~--~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~----r  316 (365)
T PLN03145        243 MEGMKG--SDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALK----R  316 (365)
T ss_pred             cccccc--ccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh----C
Confidence            763211  1113467899999999999999999999999999999999988877766566899999999999999    8


Q ss_pred             CCCCCeeEEEEEcCCC
Q 027460          179 EGCDNMTMILVQFKNA  194 (223)
Q Consensus       179 ~~~DN~Tvivi~~~~~  194 (223)
                      ++.||+||||++|...
T Consensus       317 gs~DNITvIVV~l~~~  332 (365)
T PLN03145        317 KSGDNLAVVVVCFQSQ  332 (365)
T ss_pred             CCCCCEEEEEEEeecC
Confidence            8999999999999963

>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query223
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-52
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 8e-34
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 9e-34
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 3e-32
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 2e-22
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 3e-22
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 2e-20
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-20
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 3e-20
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 3e-20
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 3e-20
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 3e-20
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 4e-20
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-19
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 3e-19
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-19
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 3e-18
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 6e-14
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 9e-14
2j4o_A401 Structure Of Tab1 Length = 401 3e-08
2pom_A372 Tab1 With Manganese Ion Length = 372 4e-08
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 5e-08
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 5e-07
3d8k_A377 Crsytal Structure Of A Phosphatase From A Toxoplasm 8e-07
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  202 bits (513), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/178 (56%), Positives = 134/178 (75%), Gaps = 4/178 (2%)
Query: 19  GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGF 78
           G  SG TA VA++  K L VANAGDSRCV+ R G+AL +S DHKP+  VE  RI KAGG 
Sbjct: 127 GKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGR 186
Query: 79  IQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
           + + GRVNG LNL+RAIGD  +K+NKSLPAE+Q+++A PDI  I +  +DEF+V+ACDGI
Sbjct: 187 VTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGI 246
Query: 138 WDCLSSQELVDFVRDQLTNE-TKLSVICEKVFDRCLAPSAGGE--GCDNMTMILVQFK 192
           W+ ++S+++V FV++++     KLS ICE++FD CLAP   G+  GCDNMT I+VQFK
Sbjct: 247 WNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma Gondii Length = 377 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query223
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-96
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 4e-96
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 2e-95
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 3e-80
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-79
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 3e-79
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 5e-76
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 5e-75
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-74
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 8e-73
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-67
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 5e-66
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-57
1txo_A237 Putative bacterial enzyme; serine/threonine protei 3e-13
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 7e-13
3rnr_A211 Stage II sporulation E family protein; structural 1e-11
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 4e-10
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 2e-09
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
 Score =  283 bits (725), Expect = 1e-96
 Identities = 101/196 (51%), Positives = 137/196 (69%), Gaps = 4/196 (2%)

Query: 1   MSDFFFVAFLEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKD 60
           + +   ++          G  SG TA VA++  K L VANAGDSRCV+ R G+AL +S D
Sbjct: 109 IEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFD 168

Query: 61  HKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDIS 119
           HKP+  VE  RI KAGG + + GRVNG LNL+RAIGD  +K+NKSLPAE+Q+++A PDI 
Sbjct: 169 HKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIE 228

Query: 120 TIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTN-ETKLSVICEKVFDRCLAPSA-- 176
            I +  +DEF+V+ACDGIW+ ++S+++V FV++++     KLS ICE++FD CLAP    
Sbjct: 229 KITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRG 288

Query: 177 GGEGCDNMTMILVQFK 192
            G GCDNMT I+VQFK
Sbjct: 289 DGTGCDNMTAIIVQFK 304
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query223
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 99.97
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 99.97
1txo_A237 Putative bacterial enzyme; serine/threonine protei 99.96
3rnr_A211 Stage II sporulation E family protein; structural 99.96
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.96
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.74
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.65
3f79_A255 Probable two-component response regulator; adaptor 99.55
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.45
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.01
3eq2_A394 Probable two-component response regulator; adaptor 98.35
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2.5e-39  Score=277.57  Aligned_cols=176  Identities=40%  Similarity=0.677  Sum_probs=157.9

Q ss_pred             CCCCCCCcceEEEEEEECCeEEEEEeccccEEEEeCCeeeeCCCCCCCCcHHHHHHHHHhCCeEeecccCCccccccccC
Q 027460           16 DFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIG   95 (223)
Q Consensus        16 ~~~~~~~GsT~~~~~i~~~~l~i~~vGDSr~~l~~~~~~~~lt~dH~~~~~~e~~ri~~~~~~~~~~r~~~~~~ltr~lG   95 (223)
                      ......+|||++++++.++++|++|+||||+|++|+|++.+||+||++.++.|+.||...++.+...|+++.+.+||+||
T Consensus       126 ~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~~rI~~~gg~v~~~rv~g~l~ltRalG  205 (307)
T 2p8e_A          126 RNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALG  205 (307)
T ss_dssp             C---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHTTCCEETTEETTTBSCSBCEE
T ss_pred             ccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHHHHHHHcCCEEEeCcccCeEecccccc
Confidence            34456799999999999999999999999999999999999999999999999999999999998889999999999999


Q ss_pred             ChhhhhcCCCCcccceeeecCcceEEEecCCCeEEEEEcCCCccCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhcCC
Q 027460           96 DVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPS  175 (223)
Q Consensus        96 ~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGl~d~l~~~~i~~~v~~~~~~~~~~~~~a~~l~~~a~~~~  175 (223)
                      +..+|.........+.+.++|++..+++.++|.|||||||||||+++++++.+++...+....+++.+|+.|++.|+.  
T Consensus       206 d~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~--  283 (307)
T 2p8e_A          206 DYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLH--  283 (307)
T ss_dssp             CGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH--
T ss_pred             CHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH--
Confidence            999997766666667789999999999999998999999999999999999999988766567899999999999999  


Q ss_pred             CCCCCCCCeeEEEEEcCCCC
Q 027460          176 AGGEGCDNMTMILVQFKNAS  195 (223)
Q Consensus       176 ~~~~~~DN~Tvivi~~~~~~  195 (223)
                        +++.||+||||+++...+
T Consensus       284 --~g~~DNiTvivv~~~~~~  301 (307)
T 2p8e_A          284 --KGSRDNMSIVLVCFSNEG  301 (307)
T ss_dssp             --TTCCSCEEEEEEEC----
T ss_pred             --cCCCCCeEEEEEECCCCC
Confidence              889999999999998654
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 223
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 4e-41
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 5e-16
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (351), Expect = 4e-41
 Identities = 71/175 (40%), Positives = 105/175 (60%), Gaps = 5/175 (2%)

Query: 21  TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ 80
            SGSTA   +I  +     N GDSR +L R  +    ++DHKP   +EK+RI  AGG + 
Sbjct: 123 RSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM 182

Query: 81  VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL-CDDDEFLVIACDGIWD 139
           + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE   +DD+F+++ACDGIWD
Sbjct: 183 IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWD 242

Query: 140 CLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNA 194
            + ++EL DFVR +L     L  +C +V D CL         DNM++IL+ F NA
Sbjct: 243 VMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK----GSRDNMSVILICFPNA 293
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query223
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 99.97
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-40  Score=281.24  Aligned_cols=176  Identities=40%  Similarity=0.716  Sum_probs=164.7

Q ss_pred             CCCCCCCcceEEEEEEECCeEEEEEeccccEEEEeCCeeeeCCCCCCCCcHHHHHHHHHhCCeEeecccCCccccccccC
Q 027460           16 DFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIG   95 (223)
Q Consensus        16 ~~~~~~~GsT~~~~~i~~~~l~i~~vGDSr~~l~~~~~~~~lt~dH~~~~~~e~~ri~~~~~~~~~~r~~~~~~ltr~lG   95 (223)
                      ......+|||++++++.++++|++|+||||+|+++++++++||+||++.+..|++|++..|+.+...|+++.+.+||+||
T Consensus       118 ~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E~~Ri~~~gg~v~~~r~~g~l~~tRa~G  197 (295)
T d1a6qa2         118 KHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALG  197 (295)
T ss_dssp             TTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHTTCCEETTEETTTBSCSBCEE
T ss_pred             ccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHHHhhHhhcCCcccccccCCceeeeeccC
Confidence            34556799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCCCcccceeeecCcceEEEec-CCCeEEEEEcCCCccCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhcC
Q 027460           96 DVEFKLNKSLPAEKQIVTANPDISTIELC-DDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAP  174 (223)
Q Consensus        96 ~~~~k~~~~~~~~~~~v~~~p~i~~~~l~-~~d~~lvL~SDGl~d~l~~~~i~~~v~~~~~~~~~~~~~a~~l~~~a~~~  174 (223)
                      |..+|.........+.++++|++..+++. +++.|||||||||||+|+++++.+++.+.+....+++.+|+.|++.|+. 
T Consensus       198 d~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~-  276 (295)
T d1a6qa2         198 DFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY-  276 (295)
T ss_dssp             CGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH-
T ss_pred             cHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh-
Confidence            99999888888888999999999999986 5566999999999999999999999998888788999999999999999 


Q ss_pred             CCCCCCCCCeeEEEEEcCCCC
Q 027460          175 SAGGEGCDNMTMILVQFKNAS  195 (223)
Q Consensus       175 ~~~~~~~DN~Tvivi~~~~~~  195 (223)
                         +++.||+||||++|++.+
T Consensus       277 ---~gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         277 ---KGSRDNMSVILICFPNAP  294 (295)
T ss_dssp             ---TTCCSCEEEEEEECTTSC
T ss_pred             ---cCCCCCeEEEEEeccCCC
Confidence               789999999999998654
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure