Citrus Sinensis ID: 027489

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220--
Protein Sequence
MASVASISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCSV
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEccccHHHHHHHHHccccEEEEEEEcccccEEEEEEccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccEEEEEEccHHHHHHHHHHccccEEEcccccccccEEEcc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEccccccccccccccccccccEcccccccccccHHHHcccccccccEEEEEcccccccccHcccccccccccHHHcccEEEEEEEEcccHHHHHHHHHHccccEEEEEEEEccccEEEEEEEcccHHHccccHHHHHHHHcccccEEEEEEEccHHHccccccccccccccccEEEEEEEcccHHHHHHHHHHcccEEEEccccccccEEEEEc
Coil and Loop (DISEMBL)
masvasiscstslsRLSIFSRltsstrplflspsslpffsstktttswfkasnrfrllsmassepkespannpglhtardeatngyfmqqtmfrikdpkvSLDFYSRVLGMSLlkrldfpemkFSLYFLgyedtasapadpvdrtvwtfgkpatielthnwgtesdpdfkgyhngnseprgfghigiTVDDVYKACERFERLGvefakkpdggkagsihcsv
Flexible Loop (DISEMBL)
masvasiscstslsrLSIFSRLTSStrplflspsslpffsstKTTTSWFKASNRFRLLSMAssepkespannpgLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELthnwgtesdPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGvefakkpdggkagsihcsv
Low Complexity Region (SEG)
MASVAsiscstslsrlsifsrltsstrplflspsslpffsstktttsWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCSV
Disordered region (IsUnstruct)
*****************IF******************FF****TTTSWFKA********************************NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE****FKGYH*****PRGFGHIGITVDDVYKACERFERLGVEFA***************
Disordered Region (DISOPRED)
*******************************************************************************DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTAS*****VD*TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCSV
Disordered Region (DISEMBL)
***********SLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMA**********NPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK*************
Disordered Region (DISPRO)
MASVASISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMASS*P**S**NNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCSV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASVASISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCSV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	222	2.2.26 [Sep-21-2011]
O49818	186	Lactoylglutathione lyase	N/A	no	0.716	0.854	0.855	2e-79
O04885	185	Lactoylglutathione lyase	N/A	no	0.707	0.848	0.840	2e-77
Q9ZS21	185	Lactoylglutathione lyase	no	no	0.707	0.848	0.815	2e-76
Q42891	185	Lactoylglutathione lyase	N/A	no	0.707	0.848	0.808	2e-74
Q8H0V3	185	Lactoylglutathione lyase	no	no	0.707	0.848	0.847	1e-72
Q6P7Q4	184	Lactoylglutathione lyase	yes	no	0.603	0.728	0.666	6e-51
Q9CPU0	184	Lactoylglutathione lyase	yes	no	0.603	0.728	0.666	1e-50
Q4R5F2	184	Lactoylglutathione lyase	N/A	no	0.603	0.728	0.622	1e-47
Q04760	184	Lactoylglutathione lyase	yes	no	0.603	0.728	0.622	2e-47
Q9HU72	176	Lactoylglutathione lyase	yes	no	0.630	0.795	0.549	5e-38

>sp|O49818|LGUL_CICAR Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1

 Score =  295 bits (754), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 136/159 (85%), Positives = 144/159 (90%)

Query: 60  MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 119
           MA+SE KESPANNPGLHT  DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF
Sbjct: 1   MAASESKESPANNPGLHTTIDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60

Query: 120 PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 179
           PEMKFSLYF+GYEDT  AP++PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+P
Sbjct: 61  PEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDP 120

Query: 180 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           RGFGHIGITVDD YKACERF+ LGVEF KKPD GK   I
Sbjct: 121 RGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGI 159

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Cicer arietinum (taxid: 3827)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|O04885|LGUL_BRAJU Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1

 Score =  288 bits (737), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 132/157 (84%), Positives = 143/157 (91%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           FGHIG+TVDDV+KACERFE+LGVEF KKP  GK  +I
Sbjct: 122 FGHIGVTVDDVHKACERFEQLGVEFVKKPHDGKMKNI 158

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica juncea (taxid: 3707)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ZS21|LGUL_SOYBN Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1

 Score =  285 bits (729), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 128/157 (81%), Positives = 142/157 (90%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           ++EPKESP+NNPGLHT  DEAT GY MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE
Sbjct: 2   AAEPKESPSNNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYF+GYE+TA AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           FGHIG+TVDD YKACERF+ LGVEF KKP+ GK   I
Sbjct: 122 FGHIGVTVDDTYKACERFQNLGVEFVKKPEDGKMKGI 158

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Active toward the hemithioacetal adducts formed by reacting methylglyoxal or phenylglyoxal with glutathione, homoglutathione or gamma-glutamylcysteine, showing no preference for homoglutathione adducts over glutathione adducts.

Glycine max (taxid: 3847)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q42891|LGUL_SOLLC Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1

 Score =  278 bits (711), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 127/157 (80%), Positives = 141/157 (89%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SE K+SP+NNPGLH   DEAT GYF+QQTMFRIKDPKVSL+FYS+VLGMSLLKRLDFPE
Sbjct: 2   ASESKDSPSNNPGLHATPDEATKGYFLQQTMFRIKDPKVSLEFYSKVLGMSLLKRLDFPE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYF+GYEDTASAP+DPV+RT WTF + +T+ELTHNWGTESDP+F GYHNGNSEPRG
Sbjct: 62  MKFSLYFMGYEDTASAPSDPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           FGHIG+TVDDVYKACERFE LGVEF KKP  GK   I
Sbjct: 122 FGHIGVTVDDVYKACERFESLGVEFVKKPLDGKMKGI 158

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Solanum lycopersicum (taxid: 4081)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8H0V3|LGUL_ARATH Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1

 Score =  272 bits (696), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/157 (84%), Positives = 143/157 (91%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SE +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEARESPANNPGLSTNRDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYFLGYEDT +AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           FGHIG+TVDDV+KACERFE LGVEFAKKP+ GK  +I
Sbjct: 122 FGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMKNI 158

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q6P7Q4|LGUL_RAT Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3

 Score =  200 bits (509), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 90/135 (66%), Positives = 107/135 (79%), Gaps = 1/135 (0%)

Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPK 83

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           D  +RT W F + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RF
Sbjct: 84  DKTERTAWAFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRF 142

Query: 200 ERLGVEFAKKPDGGK 214
           E LGV+F KKPD GK
Sbjct: 143 EELGVKFVKKPDDGK 157

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9CPU0|LGUL_MOUSE Lactoylglutathione lyase OS=Mus musculus GN=Glo1 PE=1 SV=3

 Score =  199 bits (505), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 90/135 (66%), Positives = 107/135 (79%), Gaps = 1/135 (0%)

Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPK 83

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 84  DKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142

Query: 200 ERLGVEFAKKPDGGK 214
           E LGV+F KKPD GK
Sbjct: 143 EELGVKFVKKPDDGK 157

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q4R5F2|LGUL_MACFA Lactoylglutathione lyase OS=Macaca fascicularis GN=GLO1 PE=2 SV=3

 Score =  189 bits (480), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 84/135 (62%), Positives = 103/135 (76%), Gaps = 1/135 (0%)

Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPAMKFSLYFLAYEDKNDIPK 83

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           D  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DV+ AC+RF
Sbjct: 84  DKEEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVHSACKRF 142

Query: 200 ERLGVEFAKKPDGGK 214
           E LGV+F KKPD GK
Sbjct: 143 EELGVKFVKKPDDGK 157

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Macaca fascicularis (taxid: 9541)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q04760|LGUL_HUMAN Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4

 Score =  188 bits (478), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 84/135 (62%), Positives = 103/135 (76%), Gaps = 1/135 (0%)

Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 83

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 84  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142

Query: 200 ERLGVEFAKKPDGGK 214
           E LGV+F KKPD GK
Sbjct: 143 EELGVKFVKKPDDGK 157

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9HU72|LGUL_PSEAE Lactoylglutathione lyase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gloA PE=3 SV=1

 Score =  157 bits (397), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 78/142 (54%), Positives = 91/142 (64%), Gaps = 2/142 (1%)

Query: 72  NPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY 131
            PG+    D  T  Y    TM R+KDPK SLDFYSRVLGM LL+RLDF E +FSLYFL  
Sbjct: 8   QPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAM 67

Query: 132 EDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD 191
                 P    +R  +TFG+ + +ELTHNWG+ESD     YHNGN +PRGFGHI  +V D
Sbjct: 68  TRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDD--SQYHNGNQDPRGFGHICFSVPD 125

Query: 192 VYKACERFERLGVEFAKKPDGG 213
           +  ACERFE LGV F K  D G
Sbjct: 126 LVAACERFETLGVNFVKPLDRG 147

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
255565419	234	lactoylglutathione lyase, putative [Rici	0.932	0.884	0.715	7e-82
255630246	224	unknown [Glycine max]	0.923	0.915	0.718	2e-81
356542658	235	PREDICTED: lactoylglutathione lyase-like	0.923	0.872	0.720	5e-80
225436504	235	PREDICTED: lactoylglutathione lyase isof	0.824	0.778	0.767	1e-78
297843598	235	calmodulin binding protein [Arabidopsis	0.927	0.876	0.682	5e-78
3334245	186	RecName: Full=Lactoylglutathione lyase;	0.716	0.854	0.855	1e-77
359479353	185	PREDICTED: lactoylglutathione lyase isof	0.689	0.827	0.869	3e-76
388516521	186	unknown [Medicago truncatula]	0.716	0.854	0.836	4e-76
117203563	187	glyoxalase I [Arachis hypogaea]	0.707	0.839	0.840	5e-76
3334244	185	RecName: Full=Lactoylglutathione lyase;	0.707	0.848	0.840	1e-75

>gi|255565419|ref|XP_002523700.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223537004|gb|EEF38640.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  308 bits (790), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 156/218 (71%), Positives = 172/218 (78%), Gaps = 11/218 (5%)

Query: 1   MASVASISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSM 60
           MA+ A++S        S+ SR T   +P  +S SS    S  +   S  K  NR RL SM
Sbjct: 1   MATAATLS--------SLLSRFTL-IKPPIISQSSRRIQSILRY--SKLKNPNRLRLFSM 49

Query: 61  ASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP 120
           ASSEPKESPANNPGL+T  D+AT GY MQQTM+RIKDPK SLDFYS VLGMSLLKRLDFP
Sbjct: 50  ASSEPKESPANNPGLYTTPDDATKGYIMQQTMYRIKDPKQSLDFYSHVLGMSLLKRLDFP 109

Query: 121 EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPR 180
           EMKFSLYF+GYE+TASAP DPV+RTVWTFG+ ATIELTHNWGTESDPDFKGYHNGNSEPR
Sbjct: 110 EMKFSLYFMGYENTASAPTDPVERTVWTFGQKATIELTHNWGTESDPDFKGYHNGNSEPR 169

Query: 181 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           GFGHIGITVDDVYKACERF+ LGVEF KKP+ GK   I
Sbjct: 170 GFGHIGITVDDVYKACERFKSLGVEFVKKPEDGKMKGI 207

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255630246|gb|ACU15478.1| unknown [Glycine max]

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 153/213 (71%), Positives = 173/213 (81%), Gaps = 8/213 (3%)

Query: 7   ISCSTSLSRLSIFSRLTSSTRPLFLSPSSLP-FFSSTKTTTSWFKASNRFRLLSMASSEP 65
           ++ + SL RLS   R  +  +P FLSP S+P  FS T  T    K +NRFR LSMA+ EP
Sbjct: 1   MTVTASLHRLSRL-RFIAKPQP-FLSPHSIPSHFSLTPKT----KKANRFRFLSMAA-EP 53

Query: 66  KESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS 125
           KESP+NNPGL T  DEAT GY MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS
Sbjct: 54  KESPSNNPGLRTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS 113

Query: 126 LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHI 185
           LYF+GYE+TA AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRGFGHI
Sbjct: 114 LYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHI 173

Query: 186 GITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           G+TVDD YKACERF+ LGVEF KKP+ GK   I
Sbjct: 174 GVTVDDTYKACERFQNLGVEFVKKPEDGKMKGI 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542658|ref|XP_003539783.1| PREDICTED: lactoylglutathione lyase-like [Glycine max]

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 155/215 (72%), Positives = 170/215 (79%), Gaps = 10/215 (4%)

Query: 7   ISCSTSLSRLSIFSRLTSSTRPLFLSPSSLP-FFSSTKTTTSWFKASNRFRLL--SMASS 63
           ++ + SL RLS   R  +  +P FLSP S P  FS T  T    K  NRFR    SMA+ 
Sbjct: 1   MAATASLHRLSRL-RFIAKPQP-FLSPHSTPSHFSLTPKT----KKPNRFRFRFRSMAA- 53

Query: 64  EPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK 123
           EPKESP+NNPGLHT  DEAT GY MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK
Sbjct: 54  EPKESPSNNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK 113

Query: 124 FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFG 183
           FSLYF+GYEDT  AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRGFG
Sbjct: 114 FSLYFMGYEDTTEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFG 173

Query: 184 HIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           HIGITVDD YKACERF+ LGVEF KKPD GK   I
Sbjct: 174 HIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGI 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436504|ref|XP_002276276.1| PREDICTED: lactoylglutathione lyase isoform 1 [Vitis vinifera] gi|297734925|emb|CBI17159.3| unnamed protein product [Vitis vinifera]

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 145/189 (76%), Positives = 160/189 (84%), Gaps = 6/189 (3%)

Query: 27  RPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMA-SSEPKESPANNPGLHTARDEATNG 85
           +P     SS+P F +T       K  +RFRL S + +SEPKESP+NNPGLH++ DEAT G
Sbjct: 21  KPSSSYSSSIPLFPTTTR-----KDPSRFRLFSASMASEPKESPSNNPGLHSSPDEATKG 75

Query: 86  YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 145
           YFMQQTM+RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDTASAP++  +R 
Sbjct: 76  YFMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSNETERI 135

Query: 146 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 205
           VWTF + ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD YKACERFERLGVE
Sbjct: 136 VWTFSQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDTYKACERFERLGVE 195

Query: 206 FAKKPDGGK 214
           F KKPD GK
Sbjct: 196 FVKKPDDGK 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843598|ref|XP_002889680.1| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335522|gb|EFH65939.1| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 148/217 (68%), Positives = 168/217 (77%), Gaps = 11/217 (5%)

Query: 4   VASISCSTSLSRLSIFSRLTSSTRPLFLSPSS--LPFFSSTKTTTSWFKASNRFRLLSMA 61
           + S S + ++SR+S   R        F+ P S    F +    +T   K  ++ R+ SMA
Sbjct: 1   MGSYSIAIAISRISPLIR--------FVKPYSTGFSFITCPCNSTRRPKRFDQLRVFSMA 52

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           S E +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYS VLGMSLLKRLDF E
Sbjct: 53  S-EARESPANNPGLSTVRDEATKGYIMQQTMFRIKDPKASLDFYSHVLGMSLLKRLDFSE 111

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYFLGYEDT +APADP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 112 MKFSLYFLGYEDTTTAPADPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 171

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           FGHIG+TVDDV+KACERFE LGVEF KKP+ GK  +I
Sbjct: 172 FGHIGVTVDDVHKACERFEELGVEFVKKPNDGKMKNI 208

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334245|sp|O49818.1|LGUL_CICAR RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2909424|emb|CAA12028.1| Glyoxalase I [Cicer arietinum]

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 136/159 (85%), Positives = 144/159 (90%)

Query: 60  MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 119
           MA+SE KESPANNPGLHT  DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF
Sbjct: 1   MAASESKESPANNPGLHTTIDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60

Query: 120 PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 179
           PEMKFSLYF+GYEDT  AP++PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+P
Sbjct: 61  PEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDP 120

Query: 180 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           RGFGHIGITVDD YKACERF+ LGVEF KKPD GK   I
Sbjct: 121 RGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGI 159

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479353|ref|XP_003632261.1| PREDICTED: lactoylglutathione lyase isoform 2 [Vitis vinifera]

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 133/153 (86%), Positives = 143/153 (93%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SEPKESP+NNPGLH++ DEAT GYFMQQTM+RIKDPKVSLDFYSRVLGMSLLKRLDFPE
Sbjct: 2   ASEPKESPSNNPGLHSSPDEATKGYFMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYF+GYEDTASAP++  +R VWTF + ATIELTHNWGTESDPDFKGYHNGNSEPRG
Sbjct: 62  MKFSLYFMGYEDTASAPSNETERIVWTFSQKATIELTHNWGTESDPDFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGK 214
           FGHIGITVDD YKACERFERLGVEF KKPD GK
Sbjct: 122 FGHIGITVDDTYKACERFERLGVEFVKKPDDGK 154

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516521|gb|AFK46322.1| unknown [Medicago truncatula]

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 133/159 (83%), Positives = 143/159 (89%)

Query: 60  MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 119
           MA+SE KESPANNPGLH   DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF
Sbjct: 1   MAASESKESPANNPGLHATVDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60

Query: 120 PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 179
           PEMKFSLYF+GYEDT+ AP++ VDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+P
Sbjct: 61  PEMKFSLYFMGYEDTSEAPSNSVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDP 120

Query: 180 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           RGFGHIGITVDD YKACERF+ LGVEF KKP+ GK   I
Sbjct: 121 RGFGHIGITVDDTYKACERFQNLGVEFVKKPEDGKMKGI 159

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|117203563|gb|ABJ88950.2| glyoxalase I [Arachis hypogaea]

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 132/157 (84%), Positives = 144/157 (91%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           FGHIG+TVDDV+KACERFE+LGVEF KKP+ GK  +I
Sbjct: 122 FGHIGVTVDDVHKACERFEQLGVEFVKKPNDGKMKNI 158

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334244|sp|O04885.1|LGUL_BRAJU RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2113825|emb|CAA73691.1| Glyoxalase I [Brassica juncea]

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 132/157 (84%), Positives = 143/157 (91%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           FGHIG+TVDDV+KACERFE+LGVEF KKP  GK  +I
Sbjct: 122 FGHIGVTVDDVHKACERFEQLGVEFVKKPHDGKMKNI 158

Source: Brassica juncea

Species: Brassica juncea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
TAIR|locus:2205110	235	AT1G08110 [Arabidopsis thalian	0.756	0.714	0.810	1.2e-72
RGD|2702	184	Glo1 "glyoxalase 1" [Rattus no	0.603	0.728	0.666	2.3e-48
UNIPROTKB|F1N9Q2	190	GLO1 "Uncharacterized protein"	0.603	0.705	0.674	2.9e-48
MGI|MGI:95742	184	Glo1 "glyoxalase 1" [Mus muscu	0.603	0.728	0.666	3.7e-48
UNIPROTKB|Q5BL69	184	glo1 "Glyoxalase 1" [Xenopus (	0.585	0.706	0.666	1.4e-46
ZFIN|ZDB-GENE-030722-9	180	glo1 "glyoxalase 1" [Danio rer	0.590	0.727	0.659	4.8e-46
FB|FBgn0033162	176	CG1707 [Drosophila melanogaste	0.603	0.761	0.637	6.2e-46
UNIPROTKB|A4FUZ1	184	GLO1 "GLO1 protein" [Bos tauru	0.603	0.728	0.629	7.9e-46
UNIPROTKB|I3LDM7	184	GLO1 "Uncharacterized protein"	0.603	0.728	0.637	7.9e-46
UNIPROTKB|J9NRV6	184	GLO1 "Uncharacterized protein"	0.603	0.728	0.629	1e-45

TAIR|locus:2205110 AT1G08110 [Arabidopsis thaliana (taxid:3702)]

 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 137/169 (81%), Positives = 149/169 (88%)

Query:    50 KASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVL 109
             K  ++  + SMAS E +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYSRVL
Sbjct:    41 KRFDQLCVFSMAS-EARESPANNPGLSTNRDEATKGYIMQQTMFRIKDPKASLDFYSRVL 99

Query:   110 GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF 169
             GMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG+PATIELTHNWGTESDP+F
Sbjct:   100 GMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEF 159

Query:   170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
             KGYHNGNSEPRGFGHIG+TVDDV+KACERFE LGVEFAKKP+ GK  +I
Sbjct:   160 KGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMKNI 208

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

RGD|2702 Glo1 "glyoxalase 1" [Rattus norvegicus (taxid:10116)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 90/135 (66%), Positives = 107/135 (79%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPK 83

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  +RT W F + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RF
Sbjct:    84 DKTERTAWAFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRF 142

Query:   200 ERLGVEFAKKPDGGK 214
             E LGV+F KKPD GK
Sbjct:   143 EELGVKFVKKPDDGK 157

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;ISS;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0006749 "glutathione metabolic process" evidence=IDA

GO:0009438 "methylglyoxal metabolic process" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1N9Q2 GLO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 91/135 (67%), Positives = 107/135 (79%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  +  QQTM R+KDPK SLDFY+RVLGM+LL++ DFP MKFSLYFLGYED    P 
Sbjct:    30 DPSTKDFIFQQTMLRVKDPKKSLDFYTRVLGMTLLQKFDFPPMKFSLYFLGYEDKNDIPK 89

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  +RT WTF + AT+ELTHNWGTE+D + + YHNGNS+PRGFGHIGI V DV KAC+RF
Sbjct:    90 DKAERTSWTFSRKATLELTHNWGTEND-EKQSYHNGNSDPRGFGHIGIAVPDVNKACKRF 148

Query:   200 ERLGVEFAKKPDGGK 214
             E LGV+F KKPD GK
Sbjct:   149 EELGVKFVKKPDDGK 163

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

MGI|MGI:95742 Glo1 "glyoxalase 1" [Mus musculus (taxid:10090)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 90/135 (66%), Positives = 107/135 (79%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPK 83

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct:    84 DKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142

Query:   200 ERLGVEFAKKPDGGK 214
             E LGV+F KKPD GK
Sbjct:   143 EELGVKFVKKPDDGK 157

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;IDA

GO:0005975 "carbohydrate metabolic process" evidence=ISO

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=ISO

GO:0009438 "methylglyoxal metabolic process" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q5BL69 glo1 "Glyoxalase 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 88/132 (66%), Positives = 103/132 (78%)

Query:    83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPV 142
             T  + +QQTM RIKDPK SL+FY+ VLGM+LL++ DFP MKFSLYF+ YED    PAD  
Sbjct:    28 TKDFMLQQTMLRIKDPKKSLEFYTNVLGMTLLQKFDFPSMKFSLYFMAYEDKKDIPADVN 87

Query:   143 DRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL 202
             +RT WTF + AT+ELTHNWGTE+D   K YHNGNS+PRGFGHIG+ V DVY AC+RFE L
Sbjct:    88 ERTAWTFSRKATLELTHNWGTENDE--KPYHNGNSDPRGFGHIGLAVPDVYAACKRFEEL 145

Query:   203 GVEFAKKPDGGK 214
             GV F KKPD GK
Sbjct:   146 GVTFVKKPDDGK 157

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

ZFIN|ZDB-GENE-030722-9 glo1 "glyoxalase 1" [Danio rerio (taxid:7955)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 87/132 (65%), Positives = 103/132 (78%)

Query:    83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPV 142
             T  + MQQTM R+KDP  SLDFY+R+LGM+LL++ DFP M+F+LYFLGYED    PAD  
Sbjct:    22 TKDFMMQQTMLRVKDPVKSLDFYTRILGMTLLQKFDFPSMRFTLYFLGYEDKKEIPADVK 81

Query:   143 DRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL 202
             +RT WTF + ATIELTHNWG+E+D D + YHNGNS+PRGFGHIGI V DVY AC+ FE  
Sbjct:    82 ERTAWTFSRRATIELTHNWGSETD-DSQSYHNGNSDPRGFGHIGIAVPDVYAACKLFEEN 140

Query:   203 GVEFAKKPDGGK 214
             GV F KKPD GK
Sbjct:   141 GVTFVKKPDEGK 152

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

FB|FBgn0033162 CG1707 [Drosophila melanogaster (taxid:7227)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 86/135 (63%), Positives = 102/135 (75%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  +  QQTM+RIKDP+ SL FY+ VLGM+LL +LDFPE KFSLYFLGYE+    P 
Sbjct:    20 DSSTKDFLFQQTMYRIKDPRKSLPFYTGVLGMTLLVKLDFPEAKFSLYFLGYENATDVPK 79

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             DP  R  W   + ATIELTHNWGTE DPD + YH GN++PRGFGHIGI V DVY AC+RF
Sbjct:    80 DPKQRRSWALSRKATIELTHNWGTERDPD-QNYHTGNTDPRGFGHIGIMVPDVYAACQRF 138

Query:   200 ERLGVEFAKKPDGGK 214
             + LGV+F KKPD G+
Sbjct:   139 QELGVDFVKKPDDGR 153

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|A4FUZ1 GLO1 "GLO1 protein" [Bos taurus (taxid:9913)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 85/135 (62%), Positives = 105/135 (77%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  + +QQTM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPK 83

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  ++  W F + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RF
Sbjct:    84 DKDEKVAWVFSRKATLELTHNWGTEDD-ETQSYHSGNSDPRGFGHIGIAVPDVHGACKRF 142

Query:   200 ERLGVEFAKKPDGGK 214
             E LG++F KKPD GK
Sbjct:   143 EELGIKFVKKPDDGK 157

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|I3LDM7 GLO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 86/135 (63%), Positives = 104/135 (77%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  +  QQTM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLFQQTMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPK 83

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  ++  W F + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RF
Sbjct:    84 DKSEKAAWAFSRKATLELTHNWGTEDD-ESQSYHSGNSDPRGFGHIGIAVPDVHGACKRF 142

Query:   200 ERLGVEFAKKPDGGK 214
             E LGV+F KKPD GK
Sbjct:   143 EELGVKFVKKPDDGK 157

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|J9NRV6 GLO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 85/135 (62%), Positives = 105/135 (77%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  + +QQTM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YE+    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEEKNDIPK 83

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  ++  W F + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RF
Sbjct:    84 DKDEKVAWAFSRKATLELTHNWGTEDD-ETQSYHSGNSDPRGFGHIGIAVPDVHSACKRF 142

Query:   200 ERLGVEFAKKPDGGK 214
             E LGV+F KKPD GK
Sbjct:   143 EELGVKFVKKPDDGK 157

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O04885	LGUL_BRAJU	4, ., 4, ., 1, ., 5	0.8407	0.7072	0.8486	N/A	no
Q04760	LGUL_HUMAN	4, ., 4, ., 1, ., 5	0.6222	0.6036	0.7282	yes	no
Q9CPU0	LGUL_MOUSE	4, ., 4, ., 1, ., 5	0.6666	0.6036	0.7282	yes	no
O49818	LGUL_CICAR	4, ., 4, ., 1, ., 5	0.8553	0.7162	0.8548	N/A	no
Q9HU72	LGUL_PSEAE	4, ., 4, ., 1, ., 5	0.5492	0.6306	0.7954	yes	no
Q42891	LGUL_SOLLC	4, ., 4, ., 1, ., 5	0.8089	0.7072	0.8486	N/A	no
Q6P7Q4	LGUL_RAT	4, ., 4, ., 1, ., 5	0.6666	0.6036	0.7282	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.946

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh1_pg.C_scaffold_1000665	annotation not avaliable (235 aa)
		(Arabidopsis lyrata)
Predicted Functional Partners:
	scaffold_402974.1	annotation not avaliable (284 aa)				•		•	•		0.783
	scaffold_301249.1	annotation not avaliable (258 aa)	•			•		•	•		0.695
	fgenesh2_kg.6__3118__AT4G11640.1	annotation not avaliable (331 aa)						•	•		0.616
	Al_scaffold_0001_4800	annotation not avaliable (259 aa)						•	•		0.571
	fgenesh1_pm.C_scaffold_4000942	annotation not avaliable (324 aa)	•					•	•		0.551
	scaffold_301151.1	annotation not avaliable (591 aa)						•	•		0.543
	fgenesh2_kg.8__2416__AT5G64050.1	annotation not avaliable (570 aa)	•						•		0.538
	fgenesh2_kg.4__2513__AT2G43430.1	annotation not avaliable (331 aa)	•					•	•		0.485

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	222
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	1e-116
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-108
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	8e-60
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	4e-55
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	1e-18
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	2e-18
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	9e-16
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	4e-15
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	3e-09
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	3e-09
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	3e-06
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	8e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	1e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	0.001

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score =  331 bits (850), Expect = e-116
 Identities = 153/213 (71%), Positives = 168/213 (78%), Gaps = 7/213 (3%)

Query: 6   SISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMASSEP 65
           S S +T++SRLS    +    +P     S +  F     +T   K  +R R+ SMAS EP
Sbjct: 1   SYSIATAISRLSPLILIV---KPYSSGSSFITCFC---NSTRKPKRFDRLRVFSMAS-EP 53

Query: 66  KESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS 125
           KESPANNPGL T+ DEAT GY MQQTM+RIKDPK SLDFYSRVLGMSLLKRLDFPEMKFS
Sbjct: 54  KESPANNPGLSTSPDEATKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFS 113

Query: 126 LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHI 185
           LYF+GYEDTASAP DP +RTVWTFG+ ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHI
Sbjct: 114 LYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHI 173

Query: 186 GITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           GITVDDVYKACERFE LGVEF KKP+ GK   I
Sbjct: 174 GITVDDVYKACERFEELGVEFVKKPNDGKMKGI 206

Length = 233

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score =  308 bits (790), Expect = e-108
 Identities = 129/154 (83%), Positives = 137/154 (88%)

Query: 61  ASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP 120
            +S  KES ANNPGL    DEAT GY MQQTMFRIKDPK SLDFYSRVLGMSLLKRLDFP
Sbjct: 1   MASASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFP 60

Query: 121 EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPR 180
           EMKFSLYFLGYED+ +AP DP +RTVWTFG+ ATIELTHNWGTESDP+FKGYHNGNS+PR
Sbjct: 61  EMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPR 120

Query: 181 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGK 214
           GFGHIGITVDDVYKACERFE+LGVEF KKPD GK
Sbjct: 121 GFGHIGITVDDVYKACERFEKLGVEFVKKPDDGK 154

Length = 185

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  184 bits (469), Expect = 8e-60
 Identities = 68/142 (47%), Positives = 76/142 (53%), Gaps = 25/142 (17%)

Query: 78  ARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASA 137
             D  T    +  TM R+ D   SLDFY+ VLGM LL++ DFPEMKFSL FLGY D  SA
Sbjct: 8   VADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSA 67

Query: 138 PADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACE 197
                          A IELTHNWGTE       Y  GN    GFGHI I VDDVYKACE
Sbjct: 68  ---------------AVIELTHNWGTEK------YDLGN----GFGHIAIGVDDVYKACE 102

Query: 198 RFERLGVEFAKKPDGGKAGSIH 219
           R   LG    ++P   K G+  
Sbjct: 103 RVRALGGNVVREPGPVKGGTTV 124

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  171 bits (436), Expect = 4e-55
 Identities = 63/131 (48%), Positives = 73/131 (55%), Gaps = 24/131 (18%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
              TM R+KD + SLDFY+ VLGM LL+R DFPE KF+L FLGY D  S           
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEG--------- 51

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
                  +ELT+NWGTE     + Y NGN    GFGH+   VDDVY ACER E +GVE  
Sbjct: 52  ------VLELTYNWGTE-----EPYDNGN----GFGHLAFAVDDVYAACERLEEMGVEVT 96

Query: 208 KKPDGGKAGSI 218
           K P  G    I
Sbjct: 97  KPPGDGGMKGI 107

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 77.8 bits (192), Expect = 1e-18
 Identities = 31/129 (24%), Positives = 43/129 (33%), Gaps = 26/129 (20%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
               R+ D + SLDFY+ VLG  L++ +D  E      F                     
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGR--------------- 48

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 209
                +EL  N          G H           I  +VDDV  A +R +  GVE  ++
Sbjct: 49  ----VLELLLNETPPPAAAGFGGH-------HIAFIAFSVDDVDAAYDRLKAAGVEIVRE 97

Query: 210 PDGGKAGSI 218
           P     G  
Sbjct: 98  PGRHGWGGR 106

Length = 120

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 77.8 bits (191), Expect = 2e-18
 Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 25/126 (19%)

Query: 92  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 151
           M R+ D + S+DFY+ VLGM LL+  + PE K+SL F+GY                   +
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------E 45

Query: 152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 211
            A IELT+NWG +       Y  G +    +GHI ++VD+  +ACE+  + G    ++  
Sbjct: 46  EAVIELTYNWGVDK------YELGTA----YGHIALSVDNAAEACEKIRQNGGNVTREAG 95

Query: 212 GGKAGS 217
             K G+
Sbjct: 96  PVKGGT 101

Length = 129

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 73.7 bits (181), Expect = 9e-16
 Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 32/132 (24%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDTASAPADPVDRT 145
           M   ++R+ D   ++ FY+  LGM LL++ D PE K++  FLGY  ED+           
Sbjct: 25  MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFV-------- 76

Query: 146 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 205
                    +ELT+N+G +       Y  G     GFGH GI V+DV K  E  +  G +
Sbjct: 77  ---------VELTYNYGVDK------YDIGT----GFGHFGIAVEDVAKTVELVKAKGGK 117

Query: 206 FAKKP---DGGK 214
             ++P    GGK
Sbjct: 118 VTREPGPVKGGK 129

Length = 286

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 72.1 bits (177), Expect = 4e-15
 Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 27/122 (22%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
           Q M R+ D   S+ FY +  GM LL++ D PE K+++  +GY      P D         
Sbjct: 157 QVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGY-----GPED--------- 202

Query: 150 GKPATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 208
            K   +ELT+N+G TE       Y  GN     +  I I  DDVYK  E  + +G +  +
Sbjct: 203 -KTTVLELTYNYGVTE-------YTKGN----AYAQIAIGTDDVYKTAEAIKLVGGKITR 250

Query: 209 KP 210
           +P
Sbjct: 251 EP 252

Length = 286

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 53.6 bits (128), Expect = 3e-09
 Identities = 26/132 (19%), Positives = 38/132 (28%), Gaps = 15/132 (11%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
                + D + S+DFY+ VLG+ L+K           Y L + D    P + +      F
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAF----F 60

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEF 206
           G                              G GH+   VDD      A    +  GV  
Sbjct: 61  GFEGRAGTGFVGDVALGVP--------GGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRI 112

Query: 207 AKKPDGGKAGSI 218
                G     +
Sbjct: 113 ELGEPGRGGVHV 124

Length = 138

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 52.4 bits (126), Expect = 3e-09
 Identities = 29/133 (21%), Positives = 39/133 (29%), Gaps = 33/133 (24%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
                + D + ++ FY  VLG  +L+R           FL    T               
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLGGT--------------- 42

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 209
                +EL           F+G         G  H+   VDDV  A ER +  GVE    
Sbjct: 43  ----RLEL-----------FEGDEPAPPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGG 87

Query: 210 PDGGKAGSIHCSV 222
           P     G      
Sbjct: 88  PREEPWGGRVAYF 100

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 44.3 bits (105), Expect = 3e-06
 Identities = 19/131 (14%), Positives = 34/131 (25%), Gaps = 36/131 (27%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 152
             + D + +  FY  +LG  +                                    G+ 
Sbjct: 1   LPVSDLEAARAFYEELLGFEV--------------------------------EEEDGEY 28

Query: 153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 210
           A   L          +  G    ++   G  H+   VDD+     R +  G    + P  
Sbjct: 29  AEFRLGLVLALGGFIELIGLPEPDAPGGGGVHLYFEVDDLDALVARLKAAGGTILEPPED 88

Query: 211 --DGGKAGSIH 219
              GG+   + 
Sbjct: 89  TPWGGREFYVR 99

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 40.8 bits (96), Expect = 8e-05
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 22/112 (19%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPAD-PVDRTVWTFGK 151
           F++ +   ++ FY  VLGM +L+  +F E        G +   + P D    +T+  +G 
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEE--------GCKAACNGPYDGKWSKTMIGYGP 59

Query: 152 PAT---IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFE 200
                 +ELT+N+G         Y  GN     F  I I         ++  
Sbjct: 60  EDDHFVVELTYNYGIGD------YELGND----FLGITIHSKQAVSNAKKHN 101

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 28/124 (22%), Positives = 34/124 (27%), Gaps = 28/124 (22%)

Query: 89  QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 148
                 + D   +  F+  +LG                  LG           VD     
Sbjct: 1   HHIGIVVPDLDAAAAFWVDLLG------------------LGPWGDYRDEPQNVDLAFAR 42

Query: 149 FG--KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF 206
            G      +EL      ES  D  G         G  HI   VDD+  A  R E  GV  
Sbjct: 43  LGDGPAVEVELIQPLDGESFLDKGGP--------GLHHIAYWVDDLDAAVARLEAQGVRV 94

Query: 207 AKKP 210
           A K 
Sbjct: 95  APKG 98

Length = 110

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 37.5 bits (88), Expect = 0.001
 Identities = 32/123 (26%), Positives = 43/123 (34%), Gaps = 25/123 (20%)

Query: 96  KDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT 154
            D + +L FY  VLG+   +R + P E    L FLG  +                     
Sbjct: 9   PDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNV-------------------Q 49

Query: 155 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-KKPDGG 213
           IEL      + D     +     E  G  HI   VDD+  A  R +  GV    + P  G
Sbjct: 50  IELIE--PLDDDSPIAKFLEKRGE--GLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIG 105

Query: 214 KAG 216
             G
Sbjct: 106 AGG 108

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	222
PLN02367	233	lactoylglutathione lyase	100.0
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	100.0
PLN03042	185	Lactoylglutathione lyase; Provisional	99.95
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.71
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.67
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.62
PRK10291	129	glyoxalase I; Provisional	99.61
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.6
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.58
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.57
PRK11478	129	putative lyase; Provisional	99.52
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.52
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.52
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.51
PLN02300	286	lactoylglutathione lyase	99.5
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.46
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.45
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.42
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.41
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.4
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.39
PLN02300	286	lactoylglutathione lyase	99.38
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.38
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.37
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.37
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.36
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.35
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.35
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.34
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.3
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.3
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.3
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.3
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.29
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.28
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.28
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.27
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.27
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.26
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.25
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.23
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.23
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.22
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.21
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.21
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.2
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.2
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.18
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.17
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.17
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.17
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.17
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.16
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.16
PRK06724	128	hypothetical protein; Provisional	99.15
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.15
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.14
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.13
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.13
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.12
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.12
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.11
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.09
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.09
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.09
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.09
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.08
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.08
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.04
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.03
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.03
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.02
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.02
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.02
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	98.98
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	98.98
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	98.97
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.95
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	98.93
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.88
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	98.86
COG3324	127	Predicted enzyme related to lactoylglutathione lya	98.79
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	98.76
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	98.74
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.37
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.35
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.34
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.32
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.2
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.15
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.96
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	97.82
COG3607	133	Predicted lactoylglutathione lyase [General functi	97.52
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.31
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.22
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	97.03
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	97.01
PRK10148	147	hypothetical protein; Provisional	96.65
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	96.22
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	96.21
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	94.47
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	92.65
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	89.88
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	88.92
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	87.54
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	86.93
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	86.24
PLN02367	233	lactoylglutathione lyase	85.97
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	85.56
PRK11478	129	putative lyase; Provisional	85.14
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	82.98
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	82.26
PRK10291	129	glyoxalase I; Provisional	81.05
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	80.43
PLN03042	185	Lactoylglutathione lyase; Provisional	80.23

>PLN02367 lactoylglutathione lyase

Probab=100.00  E-value=3.4e-42  Score=297.87  Aligned_cols=209  Identities=73%  Similarity=1.108  Sum_probs=183.3

Q ss_pred             ceecccccccccceeecccCCCCCccCCCCccccccCcccchhcccchhhhhhcccCCCCCCCCCCCCCCCCCCccCCCc
Q 027489            6 SISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNG   85 (222)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~   85 (222)
                      +|++++++||||+|++|+ +| +++.|+....+.+.+    +-.|+++|+|..+|++ .++++.++++|+|..||++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~   73 (233)
T PLN02367          1 SYSIATAISRLSPLILIV-KP-YSSGSSFITCFCNST----RKPKRFDRLRVFSMAS-EPKESPANNPGLSTSPDEATKG   73 (233)
T ss_pred             CchhhhhhhhccceEEec-CC-cccCCcceeeccccc----cccccccceeeecccc-CCccCcccCcccccCCCCCCCC
Confidence            578999999999999999 66 666666544444333    3458889999999994 6788999999999999999999


Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      +.++|++|+|+|+++|++||+++|||++..+.++++++|+++|+++++..++|.|..+++.|.++++..|||+++++.+.
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            99999999999999999999999999999999999999999999987665667777788999999889999999999776


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEEEe
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCS  221 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~laFi  221 (222)
                      ++.+..|++||..+.|++||||.|+|+++++++|+++|++++++|.+|.+.+++||
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFI  209 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFI  209 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEE
Confidence            55555588888777899999999999999999999999999999999998889987

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.1e-35  Score=239.47  Aligned_cols=154  Identities=53%  Similarity=0.837  Sum_probs=145.1

Q ss_pred             CCCCCCCCCCCCCccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccce
Q 027489           67 ESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTV  146 (222)
Q Consensus        67 ~~~~~~~~~~~~~~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~  146 (222)
                      .+++++.++|..+++.+..+.++|++++|+|+.+|+.||++++||.+....++++++|+++|++++...++|.+...+..
T Consensus         2 ~s~~~~~~l~~~~~~~~~t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v   81 (170)
T KOG2944|consen    2 ASDANALGLFSRADSSTPTYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSV   81 (170)
T ss_pred             CccccchhhhcccCCCCchhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCce
Confidence            46789999999999999999999999999999999999999999999999899999999999999877778888777779


Q ss_pred             eecCCCcEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEEEe
Q 027489          147 WTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCS  221 (222)
Q Consensus       147 w~~~~~~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~laFi  221 (222)
                      |++++...+||++|||++++++.. |++||.+|+|++||||+|+||+++|++|+++||+|.++|.||+||++||+
T Consensus        82 ~~~~~~~~~ELthn~Gtes~~~~~-~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~  155 (170)
T KOG2944|consen   82 FVFSRNAKLELTHNWGTESPPDQA-YLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFL  155 (170)
T ss_pred             EEecccCceeeecCCCCCCCcchh-hcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEE
Confidence            999999999999999999877544 99999999999999999999999999999999999999999999999997

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.95  E-value=1.5e-26  Score=194.66  Aligned_cols=161  Identities=81%  Similarity=1.331  Sum_probs=131.0

Q ss_pred             ccCCCCCCCCCCCCCCCCCCccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCC
Q 027489           60 MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA  139 (222)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~  139 (222)
                      |+ ++.++|+.+.+|+|.++|-+|++++++|++|+|+|+++|++||+++|||++..+.++++.+++++|+++++....|.
T Consensus         1 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~   79 (185)
T PLN03042          1 MA-SASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPT   79 (185)
T ss_pred             CC-CCCcCCcccCcccccCCCCCCCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCc
Confidence            45 36688999999999999999999999999999999999999999999999998888877789999998764332344


Q ss_pred             CCcccceeecCCCcEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEE
Q 027489          140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIH  219 (222)
Q Consensus       140 d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~la  219 (222)
                      +...+..|++.+...|||+++++.+..+....|..++..+.|++||||.|+||++++++|+++|+++...|..+....++
T Consensus        80 ~~~~~~~~l~~~~~~lEL~~~~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~  159 (185)
T PLN03042         80 DPPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLA  159 (185)
T ss_pred             chhhcccccccCCCEEEEEEcCCCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEE
Confidence            44456788888999999998766443222222555543446999999999999999999999999999888877666777


Q ss_pred             Ee
Q 027489          220 CS  221 (222)
Q Consensus       220 Fi  221 (222)
                      ||
T Consensus       160 fi  161 (185)
T PLN03042        160 FI  161 (185)
T ss_pred             EE
Confidence            75

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=2.6e-16  Score=125.18  Aligned_cols=103  Identities=26%  Similarity=0.453  Sum_probs=77.0

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC-----------CcEEEEEEecCCCCCCCCCCcccceeecCCCcE
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT  154 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~-----------~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~  154 (222)
                      +++.|++|+|+|+++|++||+++|||++..+.++++           +++.++++++.++.               ....
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~---------------~~~~   65 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPED---------------DHFV   65 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCC---------------CccE
Confidence            478999999999999999999999999988887776           55666777753210               1568


Q ss_pred             EEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEEEe
Q 027489          155 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCS  221 (222)
Q Consensus       155 IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~laFi  221 (222)
                      |||+++++...      |+.|+    +  |++|.|+++ ++.++|+++|+++...|.     +++||
T Consensus        66 lEL~~n~~~~~------~~~g~----~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~-----~~~fi  114 (127)
T cd08358          66 VELTYNYGIGD------YELGN----D--FLGITIHSK-QAVSNAKKHNWPVTEVED-----GVYEV  114 (127)
T ss_pred             EEeEecCCCCC------CCCCC----C--EEEEEEECH-HHHHHHHHCCCceecCCC-----CEEEE
Confidence            99999876532      54442    4  566666666 455999999999987664     26776

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.67  E-value=2.7e-15  Score=120.26  Aligned_cols=107  Identities=59%  Similarity=0.985  Sum_probs=82.6

Q ss_pred             CccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEe
Q 027489           79 RDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (222)
Q Consensus        79 ~~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~  158 (222)
                      .||.|+.+++.|+.|.|.|++++++||+++|||++..+.+.+++.+.+++++.++..               ....+++.
T Consensus         9 ~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~   73 (150)
T TIGR00068         9 ADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDET---------------SAAVIELT   73 (150)
T ss_pred             cCcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCC---------------CccEEEEe
Confidence            689999999999999999999999999999999998766555555556677654210               13456765


Q ss_pred             ecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecC
Q 027489          159 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       159 ~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P  210 (222)
                      .+++...      +..+    .+..|++|.|+|++++.+++.++|++++.+|
T Consensus        74 ~~~~~~~------~~~~----~g~~hi~f~v~dld~~~~~l~~~G~~~~~~~  115 (150)
T TIGR00068        74 HNWGTEK------YDLG----NGFGHIAIGVDDVYKACERVRALGGNVVREP  115 (150)
T ss_pred             ecCCCCc------ccCC----CceeEEEEecCCHHHHHHHHHHcCCccccCC
Confidence            4433211      2222    3788999999999999999999999998877

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.62  E-value=2.1e-14  Score=108.86  Aligned_cols=110  Identities=55%  Similarity=0.965  Sum_probs=81.0

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      |+|++|.|+|++++++||+++|||++......+++++..+++..++..               ....+++....+...  
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~l~~~~~~~~--   63 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDED---------------SEGVLELTYNWGTEE--   63 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCC---------------CccEEEEEecCCCCC--
Confidence            589999999999999999999999998766555445666777654310               135677765433211  


Q ss_pred             CCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEEEe
Q 027489          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCS  221 (222)
Q Consensus       168 ~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~laFi  221 (222)
                         ++..+    .+..|++|.|+|+++++++++++|+++..+|..+....++|+
T Consensus        64 ---~~~~~----~~~~~i~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~  110 (121)
T cd07233          64 ---PYDNG----NGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIAFI  110 (121)
T ss_pred             ---CcCCC----CCeEEEEEEeCCHHHHHHHHHHCCCEEeeCCccCCCceEEEE
Confidence               12222    367899999999999999999999999999876655555554

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PRK10291 glyoxalase I; Provisional

Probab=99.61  E-value=1.7e-14  Score=112.16  Aligned_cols=105  Identities=40%  Similarity=0.751  Sum_probs=76.5

Q ss_pred             EEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCcc
Q 027489           92 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG  171 (222)
Q Consensus        92 ~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~~  171 (222)
                      +|.|+|++++++||+++|||++..+...++..+.++|++.++..               ....++++.+++...      
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~------   59 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK------   59 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCC---------------CcceEEeeecCCCCC------
Confidence            58899999999999999999998776666666777888764311               135678876544211      


Q ss_pred             CCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC--CCcceEEEe
Q 027489          172 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG--GKAGSIHCS  221 (222)
Q Consensus       172 y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d--G~m~~laFi  221 (222)
                      +..|    .+++|+||.|+|+++++++|+++|+++..+|..  +....++||
T Consensus        60 ~~~g----~~~~hlaf~V~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i  107 (129)
T PRK10291         60 YELG----TAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFV  107 (129)
T ss_pred             CcCC----CCeeEEEEEeCCHHHHHHHHHHcCCccccCCcccCCCceEEEEE
Confidence            3333    378899999999999999999999999876533  222345664

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=3.8e-14  Score=111.43  Aligned_cols=115  Identities=16%  Similarity=0.221  Sum_probs=76.1

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC-----------CcEEEEEEecCCCCCCCCCCcccceeecCCCcE
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT  154 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~-----------~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~  154 (222)
                      .+++|++|.|+|++++++||++ |||++..+..+++           .+..+.++...                 .+...
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----------------~g~~~   63 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP-----------------DGHSR   63 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC-----------------CCCce
Confidence            5799999999999999999998 9999876544322           11223333321                 12468


Q ss_pred             EEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCC-CcceEEEe
Q 027489          155 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KAGSIHCS  221 (222)
Q Consensus       155 IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG-~m~~laFi  221 (222)
                      |||+.+..+...+.-. ....  ...|+.||||.|+|+++++++|+++|+++..+|.+. .....+|+
T Consensus        64 iel~~~~~~~~~~~~~-~~~~--~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~  128 (142)
T cd08353          64 LELSKFHHPAVIADHR-PAPV--NALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYI  128 (142)
T ss_pred             EEEEEecCCCCcCcCC-CCCC--CCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEE
Confidence            9998753322111000 1011  124788999999999999999999999999876543 33455554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.58  E-value=1.8e-14  Score=109.88  Aligned_cols=107  Identities=25%  Similarity=0.334  Sum_probs=79.6

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCC
Q 027489           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (222)
Q Consensus        89 ~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~  168 (222)
                      +|++|.|+|++++++||+++||++.......+..+....++..+++                 ...|||+++.+...   
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~-----------------~~~iELi~p~~~~~---   60 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG-----------------PVQIELIQPLDGDS---   60 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE-----------------TEEEEEEEESSTTC---
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC-----------------cEEEEEEEeCCCCc---
Confidence            6999999999999999999999998877666555666666665431                 26899997654321   


Q ss_pred             CccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecC-CCC-CcceEEE
Q 027489          169 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGG-KAGSIHC  220 (222)
Q Consensus       169 ~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P-~dG-~m~~laF  220 (222)
                      +. ...+    .|++||||.|+|+++++++|+++|++++.++ ..| .-..++|
T Consensus        61 ~~-~~~~----~gi~Hia~~v~D~d~~~~~l~~~G~~~~~~~~~~g~~g~r~~f  109 (109)
T PF13669_consen   61 PL-DRGG----GGIHHIAFEVDDLDAAIARLEAQGFRVLDEGPRPGRPGRRVAF  109 (109)
T ss_dssp             HH-HHTS----SEEEEEEEEESHHHHHHHHHHHTTECEEECEEEETGTCSEEEE
T ss_pred             cc-ccCC----CCEEEEEEEeCCHHHHHHHHHHCCCEEcccCcccCCCCcEEEC
Confidence            10 1122    5999999999999999999999999998764 344 3456655

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=5.4e-14  Score=106.72  Aligned_cols=101  Identities=24%  Similarity=0.390  Sum_probs=71.9

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      +++|++|.|+|++++++||+++|||+.......+..++..+|+..++                  +..++|.........
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~~~~~~~   62 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD------------------GARLELMTRPDIAPS   62 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC------------------CcEEEEEcCcccCCC
Confidence            57999999999999999999999999865543333344556666532                  356888753221110


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCC
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      +    ...   ...|+.|+||.|+   |+++++++|+++|+++..+|..
T Consensus        63 ~----~~~---~~~g~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~  104 (125)
T cd07241          63 P----NEG---ERTGWAHLAFSVGSKEAVDELTERLRADGYLIIGEPRT  104 (125)
T ss_pred             c----ccC---CCCceEEEEEECCCHHHHHHHHHHHHHCCCEEEeCcee
Confidence            0    111   1247899999996   4899999999999999987743

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=99.52  E-value=3.8e-13  Score=103.52  Aligned_cols=100  Identities=22%  Similarity=0.217  Sum_probs=67.2

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC-CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~-~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ..+++|++|.|+|++++++||+++|||++..+...++ ..+.. .+..+                  +...|+|+.....
T Consensus         4 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~------------------~~~~l~l~~~~~~   64 (129)
T PRK11478          4 LKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALN------------------GQYVIELFSFPFP   64 (129)
T ss_pred             cceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecC------------------CCcEEEEEEecCC
Confidence            4578999999999999999999999999865321111 11211 11111                  1457888753222


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P  210 (222)
                      ...+       .+....|+.|+||.|+|+++++++|+++|+++...+
T Consensus        65 ~~~~-------~~~~~~g~~hi~f~v~d~~~~~~~l~~~G~~~~~~~  104 (129)
T PRK11478         65 PERP-------SRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEAIR  104 (129)
T ss_pred             CCCC-------CCCCCCceeEEEEEeCCHHHHHHHHHHcCCeeeccc
Confidence            1111       011124788999999999999999999999987543

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.52  E-value=2.2e-13  Score=107.43  Aligned_cols=109  Identities=17%  Similarity=0.188  Sum_probs=73.3

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      ++|++|.|+|++++++||+++|||++..+...++  ...+++..+                   ...|+|..........
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~g-------------------~~~l~l~~~~~~~~~~   59 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQG-------------------DINFVLNSPLNSFAPV   59 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEcC-------------------CEEEEEecCCCCCCch
Confidence            5899999999999999999999999987643221  223444322                   3456665321111100


Q ss_pred             CCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCC-CcceEEEe
Q 027489          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KAGSIHCS  221 (222)
Q Consensus       168 ~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG-~m~~laFi  221 (222)
                        ..+...  .+.+..|++|.|+|+++++++++++|++++.+|.+. ....++||
T Consensus        60 --~~~~~~--~~~g~~hia~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i  110 (136)
T cd08342          60 --ADFLEK--HGDGVCDVAFRVDDAAAAYERAVARGAKPVQEPVEEPGELKIAAI  110 (136)
T ss_pred             --HHHHHh--cCCceEEEEEEeCCHHHHHHHHHHcCCeEccCceecCCeEEEEEE
Confidence              001000  124788999999999999999999999999999873 33345554

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.52  E-value=1.2e-13  Score=105.66  Aligned_cols=112  Identities=24%  Similarity=0.401  Sum_probs=77.2

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      +++|++|.|+|++++++||+++|||++.....+++..+..+++..+                   ...|+|....+... 
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~i~l~~~~~~~~-   60 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG-------------------NTKVELLEPLGEDS-   60 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC-------------------CEEEEEEecCCCCC-
Confidence            5789999999999999999999999987654444434455665543                   35688875322211 


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEec-CCCCCc-ceEEEe
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKA-GSIHCS  221 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~-P~dG~m-~~laFi  221 (222)
                      + ...+...+  ..|..|+||.|+|+++++++++++|++++.+ |..+.. +.++|+
T Consensus        61 ~-~~~~~~~~--~~g~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~  114 (128)
T TIGR03081        61 P-IAKFLEKN--GGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFL  114 (128)
T ss_pred             h-HHHHHhcC--CCceEEEEEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEe
Confidence            0 00011111  2478899999999999999999999999864 666654 344553

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.51  E-value=4.5e-13  Score=109.52  Aligned_cols=101  Identities=22%  Similarity=0.188  Sum_probs=68.5

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEec--CC----------------CCcEEEEEEecCCCCCCCCCCccccee
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLD--FP----------------EMKFSLYFLGYEDTASAPADPVDRTVW  147 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~--~p----------------~~~~~l~flg~~~~~~~p~d~~~~~~w  147 (222)
                      .+++|++|.|+|+++|++||+++|||++..+..  .+                ...+.++++..++              
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--------------   68 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD--------------   68 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC--------------
Confidence            478999999999999999999999998864210  00                0113344444321              


Q ss_pred             ecCCCcEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEec
Q 027489          148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK  209 (222)
Q Consensus       148 ~~~~~~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~  209 (222)
                          +..|||+...+... +    .........|+.|+||.|+|+++++++++++|+++...
T Consensus        69 ----~~~ieL~~~~~~~~-~----~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~  121 (162)
T TIGR03645        69 ----RIGVELFEFKNQEN-P----EDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMP  121 (162)
T ss_pred             ----CCcEEEEeccCCCC-C----CcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCC
Confidence                45699987543221 1    11000012488999999999999999999999886543

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PLN02300 lactoylglutathione lyase

Probab=99.50  E-value=6.5e-13  Score=117.67  Aligned_cols=107  Identities=36%  Similarity=0.656  Sum_probs=81.1

Q ss_pred             cCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           81 EATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        81 ~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      |.....++.|++|.|+|++++++||+++|||++..+.+.+++.+..+|++.++..               ....++|..+
T Consensus        18 ~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~lel~~~   82 (286)
T PLN02300         18 PKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED---------------SNFVVELTYN   82 (286)
T ss_pred             CccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCC---------------CceEEEEecc
Confidence            4455789999999999999999999999999998766666666666777654210               1356788654


Q ss_pred             CCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .+...      +..+    .|+.|++|.|+|+++++++++++|+++...|..
T Consensus        83 ~~~~~------~~~~----~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~  124 (286)
T PLN02300         83 YGVDK------YDIG----TGFGHFGIAVEDVAKTVELVKAKGGKVTREPGP  124 (286)
T ss_pred             CCCCc------cccC----CCccEEEEEeCCHHHHHHHHHHCCCeeecCCcc
Confidence            33221      2222    378999999999999999999999999887754

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.46  E-value=8e-13  Score=100.66  Aligned_cols=101  Identities=25%  Similarity=0.423  Sum_probs=72.8

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC-CCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p-~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      ++|+.|.|+|++++.+||+++|||+.......+ ++.+..+++..+                   +..++|..+......
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~~   61 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG-------------------NVQIELIEPLDDDSP   61 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC-------------------CEEEEEEEECCCCCc
Confidence            579999999999999999999999997754432 223445566542                   467888765432211


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .  ..+..  ....|..|++|.|+|+++++++++++|+++..+|.
T Consensus        62 ~--~~~~~--~~~~g~~h~~f~v~d~~~~~~~l~~~G~~~~~~~~  102 (128)
T cd07249          62 I--AKFLE--KRGEGLHHIAFEVDDIDAALARLKAQGVRLLQEGP  102 (128)
T ss_pred             H--HHHHh--cCCCceEEEEEEeCCHHHHHHHHHHCCCeeeccCC
Confidence            0  00000  11247899999999999999999999999998886

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=3.2e-12  Score=96.49  Aligned_cols=101  Identities=22%  Similarity=0.320  Sum_probs=69.0

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC-CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~-~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .+++|++|.|.|++++++||+++|||++..+...++ ..+.+ .+...+                  +..++|+......
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~i~l~~~~~~~   62 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLNG------------------GYQLELFSFPNPP   62 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecCC------------------CcEEEEEEcCCCC
Confidence            478999999999999999999999999876532222 12221 222211                  3567776432211


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ..+    .   +....|..|++|.|+|+++++++++++|+++...|..
T Consensus        63 ~~~----~---~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~~~  103 (125)
T cd08352          63 ERP----S---YPEACGLRHLAFSVEDIEAAVKHLKAKGVEVEPIRVD  103 (125)
T ss_pred             CCC----C---CCcCCCceEEEEEeCCHHHHHHHHHHcCCcccccccc
Confidence            110    0   0112478899999999999999999999999876644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.42  E-value=1.1e-12  Score=110.40  Aligned_cols=106  Identities=24%  Similarity=0.407  Sum_probs=74.5

Q ss_pred             eEEEEEEEEeC--CHHHHHHHHHhccCcEEEEEecCCC--CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           86 YFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        86 ~~l~Hv~L~V~--DlekSi~FY~~vLGf~l~~~~~~p~--~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      .+++|+++.|+  |++++++||+++|||+.....+.++  .......+..++                 ....|+|....
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~-----------------g~i~l~L~~~~   64 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD-----------------GKIRIPLNEPA   64 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC-----------------CcEEEEEecCC
Confidence            36899999999  9999999999999999887765433  223334444322                 14567776433


Q ss_pred             CCCCC---CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          162 GTESD---PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       162 g~e~d---~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .....   ..+..++.|    .|++||||.|+|+++++++|+++|++++..|..
T Consensus        65 ~~~~~s~~~~fl~~~~G----~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~~  114 (191)
T cd07250          65 SGKRKSQIQEFLEYYGG----AGVQHIALATDDIFATVAALRARGVEFLPIPDN  114 (191)
T ss_pred             CCCCccHHHHHHHHhCC----CceeEEEEECCCHHHHHHHHHHcCCeeccCchh
Confidence            21010   001012223    489999999999999999999999999988853

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.41  E-value=1.4e-12  Score=105.34  Aligned_cols=96  Identities=18%  Similarity=0.264  Sum_probs=65.6

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC-CCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p-~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      +++|++|.|+|++++++||+++|||++......+ +.+...+|+..+++.. +.           ....+.+..      
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-----------~~~~~~l~~------   62 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEE-YV-----------DHHTLALAQ------   62 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCC-cc-----------cchHHHHhc------
Confidence            5789999999999999999999999987654443 2233456665532100 00           001111110      


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHH---HHHHhCCCeEEecCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPD  211 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~---~rL~~~GV~~v~~P~  211 (222)
                               +.  ..|+.||||.|+|+++++   ++|+++|+++...|.
T Consensus        63 ---------~~--~~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g  100 (153)
T cd07257          63 ---------GP--ESGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVG  100 (153)
T ss_pred             ---------CC--CCceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCC
Confidence                     00  147899999999999986   999999999986664

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.40  E-value=1.2e-11  Score=99.01  Aligned_cols=102  Identities=17%  Similarity=0.198  Sum_probs=68.2

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcE-EEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~-~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ..+++|++|+|+|++++++||+++|||++..+...+++.. ..+|+..++.                 ...+.+..    
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-----------------~h~~~~~~----   62 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-----------------PHDIAFVG----   62 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-----------------cceEEEec----
Confidence            4579999999999999999999999999866543333222 2234433210                 12233321    


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCCHHH---HHHHHHhCCCeEEecCC-CC--CcceEEE
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPD-GG--KAGSIHC  220 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdDVda---a~~rL~~~GV~~v~~P~-dG--~m~~laF  220 (222)
                              ..     ..++.|+||.|+|+++   ++++|+++|+++...|. .|  ....++|
T Consensus        63 --------~~-----~~~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf  112 (143)
T cd07243          63 --------GP-----DGKLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYF  112 (143)
T ss_pred             --------CC-----CCCceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEE
Confidence                    00     1378999999999877   67899999999986663 23  2344554

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.39  E-value=8.7e-13  Score=99.61  Aligned_cols=111  Identities=28%  Similarity=0.372  Sum_probs=69.7

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecC--CCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF--PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~--p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      +|+|++|.|+|++++++||+++|||++......  .......+++..+                   ...++|..+....
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~   61 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG-------------------EGHIELFLNPSPP   61 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEEST-------------------SSCEEEEEEESSS
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccc-------------------ccceeeeeecccc
Confidence            689999999999999999999999999987652  1222233444432                   3456666554332


Q ss_pred             CCCCCccCC-CCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEE
Q 027489          165 SDPDFKGYH-NGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIH  219 (222)
Q Consensus       165 ~d~~~~~y~-~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~la  219 (222)
                      ....  ... .++ ...++.|+++.++|+++++++|++.|+++...|..+......
T Consensus        62 ~~~~--~~~~~~~-~~~~i~~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~  114 (128)
T PF00903_consen   62 PRAS--GHSFPEH-GGHHIAFLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGY  114 (128)
T ss_dssp             SSSE--EEHHHSH-TSEEEEEEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEE
T ss_pred             cccc--ccccccc-cceeEEEEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEE
Confidence            2110  000 000 011334444445578889999999999999988654444433

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PLN02300 lactoylglutathione lyase

Probab=99.38  E-value=1e-11  Score=110.01  Aligned_cols=103  Identities=35%  Similarity=0.663  Sum_probs=79.5

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..++.|+.|.|+|++++.+||+++|||++....+.++.+|...++++++..               ....+++..+.+..
T Consensus       152 ~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~lel~~~~~~~  216 (286)
T PLN02300        152 PEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPED---------------KTTVLELTYNYGVT  216 (286)
T ss_pred             CCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCC---------------CccEEEEeecCCCC
Confidence            447889999999999999999999999998665555556777777654310               13467887654432


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .      +..|+    +++|++|.|+|+++++++++++|++++.+|.+
T Consensus       217 ~------~~~g~----~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~  254 (286)
T PLN02300        217 E------YTKGN----AYAQIAIGTDDVYKTAEAIKLVGGKITREPGP  254 (286)
T ss_pred             c------cccCC----ceeEEEEecCCHHHHHHHHHHcCCeEecCCcc
Confidence            1      33343    78899999999999999999999999988754

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.38  E-value=1.8e-11  Score=91.43  Aligned_cols=98  Identities=18%  Similarity=0.298  Sum_probs=67.5

Q ss_pred             EEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCC
Q 027489           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (222)
Q Consensus        90 Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~  169 (222)
                      |++|.|.|++++++||+++|||++....+.. .++.+++++.++.                ....|++....+....   
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~----------------~~~~l~~~~~~~~~~~---   60 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMG-GGFRWVTVAPPGS----------------PETSLVLAPPANPAAM---   60 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccC-CCcEEEEEeCCCC----------------CeeEEEEeCCCCcccc---
Confidence            8999999999999999999999998765422 2233444443221                0245655533222110   


Q ss_pred             ccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       170 ~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      . ..    .+.+..|++|.|+|+++++++++++|+++..+|.+
T Consensus        61 ~-~~----~~~~~~~~~~~v~di~~~~~~l~~~g~~~~~~~~~   98 (119)
T cd07263          61 S-GL----QPGGTPGLVLATDDIDATYEELKARGVEFSEEPRE   98 (119)
T ss_pred             c-cc----cCCCceEEEEEehHHHHHHHHHHhCCCEEeecccc
Confidence            0 11    12467899999999999999999999999988843

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.37  E-value=9.1e-12  Score=101.59  Aligned_cols=104  Identities=17%  Similarity=0.182  Sum_probs=70.3

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      .++|++|.|+|++++.+||+++|||++..+..   +.+  .|...++.                .+..|+|........ 
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~~~--~~~~~~~~----------------~~~~l~l~~~~~~~~-   58 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---DRV--RLEEGGGG----------------PGAVVDVLEEPDQPR-   58 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---CEE--EEEecCCC----------------CCCEEEEEeCCCCCC-
Confidence            36899999999999999999999999976543   222  23322210                146788865421110 


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                           ...+   ..++.||||.|+|   +++++++|+++|+++......+.++.++|
T Consensus        59 -----~~~~---~~~l~Hiaf~v~d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf  107 (157)
T cd08347          59 -----GRPG---AGTVHHVAFRVPDDEELEAWKERLEALGLPVSGIVDRFYFKSLYF  107 (157)
T ss_pred             -----Cccc---CCceEEEEEECCCHHHHHHHHHHHHHCCCCcccccccccEEEEEE
Confidence                 0111   1478899999998   99999999999998654433445555554

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.37  E-value=1.3e-11  Score=99.86  Aligned_cols=97  Identities=22%  Similarity=0.377  Sum_probs=68.4

Q ss_pred             CCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC---CCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEe
Q 027489           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP---EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p---~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~  158 (222)
                      .|..++++|++|.|+|++++++||+++|||++......+   +......|+..++.                 ...+.+.
T Consensus         4 ~~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~i~~~   66 (154)
T cd07237           4 VTGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR-----------------HHSLALA   66 (154)
T ss_pred             ccCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC-----------------CCCEEEE
Confidence            466789999999999999999999999999986543321   11234455544221                 2334443


Q ss_pred             ecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHH---HHHHHHHhCCCeEEecCC
Q 027489          159 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPD  211 (222)
Q Consensus       159 ~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVd---aa~~rL~~~GV~~v~~P~  211 (222)
                      ..            ..    +.++.||||.|+|++   +++++|+++|+++..+|.
T Consensus        67 ~~------------~~----~~g~~Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~  106 (154)
T cd07237          67 EG------------PG----PKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLG  106 (154)
T ss_pred             cC------------CC----CceeEEEEEEcCCHHHHHHHHHHHHHcCCceeccCC
Confidence            21            00    137899999998754   689999999999987764

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.36  E-value=2e-12  Score=112.09  Aligned_cols=107  Identities=38%  Similarity=0.636  Sum_probs=89.6

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC-----------CcEEEEEEecCCCCCCCCCCcccceeecCCCc
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPA  153 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~-----------~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~  153 (222)
                      .-++-|+.+.|-|.+++++||+++|||+++...+|++           ++|+-.|+|++.     +|.          +.
T Consensus        15 ~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGp-----Eds----------hF   79 (299)
T KOG2943|consen   15 TRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGP-----EDS----------HF   79 (299)
T ss_pred             chheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCC-----Ccc----------cE
Confidence            5578899999999999999999999999999989988           678889999974     443          68


Q ss_pred             EEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCC-------CeEEecCCCCCcc
Q 027489          154 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG-------VEFAKKPDGGKAG  216 (222)
Q Consensus       154 ~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~G-------V~~v~~P~dG~m~  216 (222)
                      .|||++|.|...      |..||    +|+||.|.++|+-..++.++..|       +-+++.|+..++.
T Consensus        80 ViELTYNYgV~~------YelGn----dfg~i~I~s~dv~~~ve~v~~p~~~~~g~~~~~v~dPdGykF~  139 (299)
T KOG2943|consen   80 VIELTYNYGVSK------YELGN----DFGGITIASDDVFSKVEKVNAPGGKGSGCGIAFVKDPDGYKFY  139 (299)
T ss_pred             EEEEEeccCccc------eeccC----CcccEEEeHHHHHHHHHHhcCcCCcccceEEEEEECCCCcEEE
Confidence            999999998754      88887    99999999999999988888743       5566777554443

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.35  E-value=3.3e-11  Score=91.99  Aligned_cols=103  Identities=22%  Similarity=0.316  Sum_probs=69.9

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      ++++|+.|.|+|++++++||+++|||++....   + .  .++++.++.                 ...|.|....+...
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~--~~~l~~~~~-----------------~~~l~l~~~~~~~~   57 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERT---D-S--TAVLGTGGK-----------------RPLLVLEEDPDAPP   57 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C-C--EEEEecCCC-----------------eEEEEEEeCCCCCc
Confidence            47999999999999999999999999998652   1 1  244554320                 24566654322110


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                       +    ...    ..|..|++|.|+   |+++++++++++|+++......+..+.++|
T Consensus        58 -~----~~~----~~~~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~  106 (125)
T cd07255          58 -A----PPG----ATGLYHFAILLPSRADLAAALRRLIELGIPLVGASDHLVSEALYL  106 (125)
T ss_pred             -c----cCC----CCcEEEEEEECCCHHHHHHHHHHHHHcCCceeccccccceeEEEE
Confidence             0    111    137789999997   499999999999999865544444444444

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.35  E-value=2.3e-11  Score=92.15  Aligned_cols=110  Identities=21%  Similarity=0.234  Sum_probs=70.9

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCC-cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~-~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      .++|++|.|+|++++++||+++|||++..+...++. .....++..+..               ..+..|+|........
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~~   65 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLG---------------SPGTLLTFFEWPDAGP   65 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCC---------------CCCCEEEEEecCCCCC
Confidence            368999999999999999999999998776543221 112233332210               0145688875422211


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCCCCcceEE
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKAGSIH  219 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~dG~m~~la  219 (222)
                       +       .+....+..|+||.|+   |+++++++++++|+++...+..+.++.++
T Consensus        66 -~-------~~~~~~~~~hi~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  114 (126)
T cd08346          66 -K-------GRRGPGQIHHIAFSVPSEASLDAWRERLRAAGVPVSGVVDHFGERSIY  114 (126)
T ss_pred             -C-------CCCCCCcEEEEEEEcCCHHHHHHHHHHHHHcCCcccceEeecceEEEE
Confidence             0       0011246789999998   57999999999999987655433334443

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.34  E-value=1.3e-11  Score=90.96  Aligned_cols=95  Identities=23%  Similarity=0.270  Sum_probs=67.0

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      |+|++|.|+|++++++||+++|||++..+...+.   ...++..++                  ...++|....+.... 
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~------------------~~~i~l~~~~~~~~~-   58 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGD------------------GPQLHLIEEDPPDAL-   58 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCC------------------CcEEEEEecCCCccc-
Confidence            5799999999999999999999999875433221   123333322                  236777654322110 


Q ss_pred             CCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       168 ~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                          .+    ...+..|++|.|+|+++++++++++|++++..+..
T Consensus        59 ----~~----~~~~~~~~~~~v~d~~~~~~~l~~~g~~~~~~~~~   95 (114)
T cd07245          59 ----PE----GPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVP   95 (114)
T ss_pred             ----cC----CCcccceEEEEeCCHHHHHHHHHHcCCCcccccCC
Confidence                01    11366899999999999999999999999887754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.30  E-value=6.1e-11  Score=96.58  Aligned_cols=87  Identities=17%  Similarity=0.263  Sum_probs=59.9

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      ++++|++|.|+|++++++||+++|||++......+++.....|+..++.                 ...+.+...     
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~i~l~~~-----   59 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG-----------------VHDTALTGG-----   59 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC-----------------cceEEEecC-----
Confidence            5799999999999999999999999998654333222222334432210                 123433210     


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeE
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEF  206 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~  206 (222)
                              .+    .++.|+||.|+|   +++++++|+++|+.+
T Consensus        60 --------~~----~~~~Hiaf~v~~~~~v~~~~~~L~~~G~~~   91 (161)
T cd07256          60 --------NG----PRLHHVAFWVPEPHNIIRTCDLLAAAGYSD   91 (161)
T ss_pred             --------CC----CceeEEEEEcCCHHHHHHHHHHHHHcCCCc
Confidence                    11    267899999986   888899999999863

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.30  E-value=1.3e-10  Score=88.84  Aligned_cols=99  Identities=15%  Similarity=0.170  Sum_probs=66.4

Q ss_pred             EEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCc
Q 027489           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (222)
Q Consensus        91 v~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~  170 (222)
                      ..|.|+|++++++||+++||+++......+++......+..+                   +..+.|...+......   
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~l~~~~~~~~~~---   60 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG-------------------DGGVMVGSVRDDYRAS---   60 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC-------------------CEEEEEecCCCccccc---
Confidence            468999999999999999999998765333333333334432                   2345555433221100   


Q ss_pred             cCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCC
Q 027489          171 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK  214 (222)
Q Consensus       171 ~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~  214 (222)
                       . ... ...+..|++|.|+|+++++++++++|++++.+|.+..
T Consensus        61 -~-~~~-~~~~~~~~~~~v~d~d~~~~~l~~~G~~v~~~~~~~~  101 (122)
T cd08355          61 -S-ARA-GGAGTQGVYVVVDDVDAHYERARAAGAEILREPTDTP  101 (122)
T ss_pred             -c-ccc-CCCceEEEEEEECCHHHHHHHHHHCCCEEeeCccccC
Confidence             0 000 1125579999999999999999999999998886644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.30  E-value=7.1e-11  Score=96.87  Aligned_cols=97  Identities=18%  Similarity=0.268  Sum_probs=65.9

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|++|.|+|++++++||+++|||++......+++.....|+...+.                 ...+.+...  . 
T Consensus         4 i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~i~l~~~--~-   63 (166)
T cd09014           4 VRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNK-----------------VHDVAYTRD--P-   63 (166)
T ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCC-----------------ceeEEEecC--C-
Confidence            56799999999999999999999999998765443333222344443210                 123333211  0 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~d  212 (222)
                             .  +  .+.++.|+||.|+|   +++++++|+++|++++..|.+
T Consensus        64 -------~--~--~~~~~~hiaf~v~~~~~l~~~~~~l~~~Gv~i~~~p~~  103 (166)
T cd09014          64 -------A--G--ARGRLHHLAYALDTREDVLRAADIFLENGIFIEAGPGK  103 (166)
T ss_pred             -------C--C--CCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCcc
Confidence                   0  0  11367899999986   557889999999999877754

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.30  E-value=7.4e-11  Score=92.59  Aligned_cols=92  Identities=18%  Similarity=0.245  Sum_probs=64.7

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      .+++|++|.|+|++++++||+++|||++....+  .   ...|+..++..               ....|.|....  . 
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~---------------~~~~i~l~~~~--~-   58 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGG---------------DHHNLFLIKTP--A-   58 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCC---------------CCcEEEEecCC--C-
Confidence            368999999999999999999999999876532  1   12455443210               13456664221  0 


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHH---HHHHhCCCeEEecCCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDG  212 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~---~rL~~~GV~~v~~P~d  212 (222)
                              .    ..|+.|+||.|+|++++.   ++|+++|+++...|..
T Consensus        59 --------~----~~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~   96 (134)
T cd08360          59 --------P----MAGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGR   96 (134)
T ss_pred             --------C----CCcceEEEEEeCCHHHHHHHHHHHHHcCCccccCCCC
Confidence                    0    137899999999988766   6999999998766643

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.29  E-value=9.7e-11  Score=90.94  Aligned_cols=104  Identities=25%  Similarity=0.369  Sum_probs=70.3

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      +|+|+.|.|+|++++++||+++|||++....+.  .  ...|+..+..                ....+.+....+... 
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~~----------------~~~~l~l~~~~~~~~-   59 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDPD----------------EHHQIALITGRPAAP-   59 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecCC----------------CceEEEEEecCCCCC-
Confidence            589999999999999999999999998765321  1  2345543310                134566654322110 


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeCCHH---HHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~VdDVd---aa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                            ..   ...+++|++|.|+|++   ++++++.++|+++...+..+..+.++|
T Consensus        60 ------~~---~~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~  107 (134)
T cd08348          60 ------PP---GPAGLNHIAFEVDSLDDLRDLYERLRAAGITPVWPVDHGNAWSIYF  107 (134)
T ss_pred             ------CC---CCCCceEEEEEeCCHHHHHHHHHHHHHCCCCccccCCCCceeEEEE
Confidence                  00   1247789999998755   588999999999987766554444443

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.28  E-value=9.2e-11  Score=91.99  Aligned_cols=101  Identities=20%  Similarity=0.258  Sum_probs=65.9

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCC--cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~--~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      .+++|+.|.|+|++++++||+++|||++..+......  .....+. .                   ++..|+|... + 
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~-------------------~~~~i~l~~~-~-   60 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFL-I-------------------GGLWIAIMEG-D-   60 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEE-c-------------------CCeEEEEecC-C-
Confidence            4799999999999999999999999987654321100  0001111 1                   1345666421 1 


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecC--CCCCcceEEE
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKP--DGGKAGSIHC  220 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P--~dG~m~~laF  220 (222)
                      .       ..     ..+..|+||.|+  |+++++++|+++|+++....  ..|..+.++|
T Consensus        61 ~-------~~-----~~~~~Hiaf~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf  109 (131)
T cd08364          61 S-------LQ-----ERTYNHIAFKISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYF  109 (131)
T ss_pred             C-------CC-----CCCceEEEEEcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEE
Confidence            0       10     126789999998  79999999999999986432  2233455655

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.28  E-value=1.2e-10  Score=87.64  Aligned_cols=94  Identities=19%  Similarity=0.103  Sum_probs=64.8

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      +.|++|.|+|++++++||+++|||++..... +...+  .++..++                  ...+.+.......   
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~------------------~~~~~~~~~~~~~---   56 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG------------------GAVGGLMKAPEPA---   56 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC------------------ccEEEEecCCCCC---
Confidence            3799999999999999999999999875432 12223  3333321                  1234444321110   


Q ss_pred             CCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCC
Q 027489          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK  214 (222)
Q Consensus       168 ~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~  214 (222)
                           .    ...+..|++|.|+|+++++++++++|++++.+|.+..
T Consensus        57 -----~----~~~~~~~~~f~v~di~~~~~~l~~~g~~~~~~~~~~~   94 (114)
T cd07247          57 -----A----GSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDIP   94 (114)
T ss_pred             -----C----CCCCeEEEEEEeCCHHHHHHHHHHCCCEEEeCCcccC
Confidence                 0    1124569999999999999999999999998886543

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.27  E-value=1.1e-10  Score=92.23  Aligned_cols=92  Identities=18%  Similarity=0.312  Sum_probs=64.8

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++..+..      ...++..+                   +..+.|....+ .
T Consensus         2 i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~-------------------g~~l~l~~~~~-~   55 (139)
T PRK04101          2 LKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN-------------------GLWIALNEEKD-I   55 (139)
T ss_pred             CCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC-------------------CeEEEeeccCC-C
Confidence            3468999999999999999999999999875421      12344432                   23455532211 1


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P~  211 (222)
                        +      .++ ...+++|++|.|+  |+++++++++++|+++...|.
T Consensus        56 --~------~~~-~~~~~~hiaf~v~~~dv~~~~~~l~~~G~~i~~~~~   95 (139)
T PRK04101         56 --P------RNE-IHQSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRE   95 (139)
T ss_pred             --C------Ccc-CCCCeeEEEEEecHHHHHHHHHHHHHCCceEcCCcc
Confidence              0      010 1236789999998  999999999999999976653

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.27  E-value=1.5e-10  Score=88.67  Aligned_cols=90  Identities=23%  Similarity=0.330  Sum_probs=63.0

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .++++|+.|.|+|++++++||+++|||++.....  ++  . .|+...+..               ....+.|..  +  
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~--~-~~~~~~~~~---------------~~~~~~l~~--~--   57 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG--R-VYLKAWDEF---------------DHHSIVLRE--A--   57 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc--e-EEEEccCCC---------------cccEEEecc--C--
Confidence            4689999999999999999999999999875431  21  1 233321100               023344421  0  


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                               .    ..++.|++|.|+   |+++++++++++|+++...|.
T Consensus        58 ---------~----~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~   94 (122)
T cd07265          58 ---------D----TAGLDFMGFKVLDDADLEKLEARLQAYGVAVERIPA   94 (122)
T ss_pred             ---------C----CCCeeEEEEEeCCHHHHHHHHHHHHHCCCcEEEccc
Confidence                     0    126789999997   799999999999999987653

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.26  E-value=1.6e-10  Score=90.10  Aligned_cols=90  Identities=21%  Similarity=0.385  Sum_probs=65.8

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCC
Q 027489           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (222)
Q Consensus        89 ~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~  168 (222)
                      +|+.|.|+|++++++||+++|||++......+ +....+|+..++.                 ...|++...  .     
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~-----------------~~~l~~~~~--~-----   55 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED-----------------HHDLALFPG--P-----   55 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC-----------------cceEEEEcC--C-----
Confidence            59999999999999999999999987765433 2234456654321                 235555421  0     


Q ss_pred             CccCCCCCCCCCceeEEEEEeCCHH---HHHHHHHhCCCeEEecCCC
Q 027489          169 FKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDG  212 (222)
Q Consensus       169 ~~~y~~gn~~p~G~~HIaf~VdDVd---aa~~rL~~~GV~~v~~P~d  212 (222)
                         .      ..++.|++|.|+|++   +++++++++|+++..+|.+
T Consensus        56 ---~------~~~~~hl~~~v~d~~~~~~~~~~l~~~G~~i~~~~~~   93 (131)
T cd08343          56 ---E------RPGLHHVAFEVESLDDILRAADRLAANGIQIEFGPGR   93 (131)
T ss_pred             ---C------CCCeeEEEEEcCCHHHHHHHHHHHHHcCCeeEECCCc
Confidence               0      137789999999874   7899999999999987754

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.25  E-value=1.8e-10  Score=86.88  Aligned_cols=97  Identities=21%  Similarity=0.305  Sum_probs=66.2

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      .+++|+.|.|+|++++++||+++|||++....+.+  .+  ..+..+                   ...++|....+. .
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~--~~~~~~-------------------~~~~~l~~~~~~-~   57 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GR--KALRFG-------------------SQKINLHPVGGE-F   57 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccC--Cc--eEEEeC-------------------CEEEEEecCCCc-c
Confidence            46899999999999999999999999987653321  12  222322                   245666532211 1


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCC-HHHHHHHHHhCCCeEEecCCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDD-VYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdD-Vdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .+.  ...    ...|..|++|.|++ +++++++++++|+++..+|.+
T Consensus        58 ~~~--~~~----~~~~~~hi~~~~~~~~~~~~~~l~~~G~~~~~~~~~   99 (125)
T cd07253          58 EPA--AGS----PGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVP   99 (125)
T ss_pred             CcC--ccC----CCCCCceEEEEecccHHHHHHHHHHCCceeecCccc
Confidence            010  011    12477899999975 999999999999999877643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.23  E-value=2.2e-10  Score=86.07  Aligned_cols=87  Identities=23%  Similarity=0.389  Sum_probs=63.7

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      ++++|+.|.|+|++++++||+++|||++....+    .  ..|+..++.                ....+.+...  .  
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~--~~~~~~~~~----------------~~~~~~~~~~--~--   54 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA----G--SVYLRCSED----------------DHHSLVLTEG--D--   54 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC----C--eEEEecCCC----------------CcEEEEEEeC--C--
Confidence            479999999999999999999999999886532    1  234443210                0234444321  0  


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                                   ..+..|++|.|+   |++++.++++++|+++...|.
T Consensus        55 -------------~~~~~h~~~~v~~~~~v~~~~~~l~~~g~~~~~~~~   90 (117)
T cd07240          55 -------------EPGVDALGFEVASEEDLEALAAHLEAAGVAPEEASD   90 (117)
T ss_pred             -------------CCCceeEEEEcCCHHHHHHHHHHHHHcCCceEEcCc
Confidence                         025689999997   689999999999999988874

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.23  E-value=2.1e-10  Score=88.39  Aligned_cols=89  Identities=16%  Similarity=0.351  Sum_probs=63.6

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      |.++++|+.|.|+|+++|++||+++|||++....    +.+.  ++..++                  +..|++...   
T Consensus         1 ~~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~--~~~~~~------------------~~~l~~~~~---   53 (123)
T cd08351           1 MTVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPFA--VVKLDN------------------GVSLDFAQP---   53 (123)
T ss_pred             CcceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEE--EEEcCC------------------CcEEEEecC---
Confidence            3578999999999999999999999999987632    2222  222221                  234555421   


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecCCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .       ..      .+..|++|.|+  |+++++++++++|+++...|..
T Consensus        54 ~-------~~------~~~~h~a~~v~~~dl~~~~~~l~~~G~~~~~~~~~   91 (123)
T cd08351          54 D-------GE------IPPQHYAFLVSEEEFDRIFARIRERGIDYWADPQR   91 (123)
T ss_pred             C-------CC------CCcceEEEEeCHHHHHHHHHHHHHcCCceecCCcc
Confidence            0       00      13479999887  6999999999999999877654

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.22  E-value=2.3e-10  Score=87.46  Aligned_cols=96  Identities=17%  Similarity=0.240  Sum_probs=61.8

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC-C
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT-E  164 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~-e  164 (222)
                      +++.|+.|.|+|+++|++||+++|||++..+.  +.  + ..+ .  +                  +..|.+...+.. .
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~--~~--~-~~~-~--~------------------~~~l~~~~~~~~~~   54 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDF--GE--N-VTF-E--G------------------GFALQEGYSWLEGI   54 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeecc--Cc--e-EEE-e--c------------------cceeccchhhhccC
Confidence            47899999999999999999999999986532  21  1 122 1  1                  111111111100 0


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCC-eEEecCCCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV-EFAKKPDGGK  214 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV-~~v~~P~dG~  214 (222)
                      ..+.   ...+    .+..|++|.|+|+++++++++++|+ +++.+|.+.+
T Consensus        55 ~~~~---~~~~----~~~~~l~~~v~dvd~~~~~l~~~g~~~~~~~~~~~~   98 (120)
T cd09011          55 SKAD---IIEK----SNNFELYFEEEDFDAFLDKLKRYDNIEYVHPIKEHP   98 (120)
T ss_pred             Cccc---cccc----CCceEEEEEehhhHHHHHHHHhcCCcEEecCcccCC
Confidence            0000   1111    2447999999999999999999985 7888887644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.21  E-value=4.3e-10  Score=86.33  Aligned_cols=96  Identities=18%  Similarity=0.271  Sum_probs=66.9

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhcc---CcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVL---GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vL---Gf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +++|+.|.|+|++++++||+++|   ||++....+  + ...  |....+                  +..|+|......
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~~~--~~~~~~------------------~~~i~l~~~~~~   57 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-GRS--WRAGDG------------------GTYLVLQQADGE   57 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-Cce--EEecCC------------------ceEEEEEecccC
Confidence            47899999999999999999999   999877542  1 111  222111                  457777643221


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .. +.   ...+   ..|++|+||.|+   |+++++++++++|+++...|.+
T Consensus        58 ~~-~~---~~~~---~~g~~hia~~v~~~~d~~~~~~~l~~~g~~~~~~~~~  102 (128)
T cd07242          58 SA-GR---HDRR---NPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPRE  102 (128)
T ss_pred             CC-cc---cccC---CcCeeEEEEEcCCHHHHHHHHHHHHHcCCeEecCCcc
Confidence            11 00   1111   247889999997   4899999999999999987764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.21  E-value=5.3e-10  Score=80.96  Aligned_cols=91  Identities=27%  Similarity=0.345  Sum_probs=67.1

Q ss_pred             EEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCC
Q 027489           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (222)
Q Consensus        90 Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~  169 (222)
                      |+.+.|+|++++++||+++|||++......  ......++..+                   +..|+|....+...    
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~-------------------~~~i~l~~~~~~~~----   55 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG-------------------GTRLELFEGDEPAP----   55 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC-------------------CceEEEecCCCCCC----
Confidence            889999999999999999999998876542  11234455432                   35677865432210    


Q ss_pred             ccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       170 ~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                        ..    .+.+..|++|.|+|++++.++++++|+.+...+.
T Consensus        56 --~~----~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~   91 (112)
T cd06587          56 --AP----SGGGGVHLAFEVDDVDAAYERLKAAGVEVLGEPR   91 (112)
T ss_pred             --cc----cCCCeeEEEEECCCHHHHHHHHHHcCCcccCCCc
Confidence              10    1236789999999999999999999999988774

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.20  E-value=4.9e-10  Score=99.29  Aligned_cols=95  Identities=18%  Similarity=0.303  Sum_probs=64.8

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcE-EEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~-~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      ...+++|++|.|+|++++++||+++|||++......+++.. ...|+..++.                 ...+.+...  
T Consensus       142 ~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~--  202 (303)
T TIGR03211       142 GARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK-----------------AHDIAFVGD--  202 (303)
T ss_pred             CceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC-----------------CcccceecC--
Confidence            35689999999999999999999999999876544333332 2334433210                 111222110  


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~  211 (222)
                                . +   +.+++|+||.|+|   +++++++|+++|+++..+|.
T Consensus       203 ----------~-~---~g~~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~  240 (303)
T TIGR03211       203 ----------P-E---PGKLHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPT  240 (303)
T ss_pred             ----------C-C---CCceEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCc
Confidence                      0 0   1248899999986   66688999999999987774

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.20  E-value=1e-09  Score=82.83  Aligned_cols=96  Identities=17%  Similarity=0.189  Sum_probs=65.6

Q ss_pred             EEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCc
Q 027489           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (222)
Q Consensus        91 v~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~  170 (222)
                      +.|.|+|++++++||+++||+++......+++.+....+..+                   +..+++..... . .. ..
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~l~~~~~-~-~~-~~   62 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG-------------------DSVLMLADEFP-E-HG-SP   62 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC-------------------CEEEEEecCCc-c-cC-CC
Confidence            458999999999999999999998776544444444444433                   23556643211 1 00 00


Q ss_pred             cCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCC
Q 027489          171 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG  213 (222)
Q Consensus       171 ~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG  213 (222)
                      ..     .+.+..|++|.|+|++++++++.+.|++++.+|...
T Consensus        63 ~~-----~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~  100 (122)
T cd07246          63 AS-----WGGTPVSLHLYVEDVDATFARAVAAGATSVMPPADQ  100 (122)
T ss_pred             CC-----CCCceEEEEEEeCCHHHHHHHHHHCCCeEecCcccc
Confidence            01     113557999999999999999999999999888643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.18  E-value=2.2e-10  Score=89.90  Aligned_cols=98  Identities=20%  Similarity=0.275  Sum_probs=65.3

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      |+|+.|.|+|++++++||+++|||++....   + ..  .++..+                   +..+++..... .  +
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~---~-~~--~~~~~~-------------------~~~l~l~~~~~-~--~   52 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLG---E-KT--AYFTIG-------------------GTWLALNEEPD-I--P   52 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccC---C-cc--ceEeeC-------------------ceEEEEEccCC-C--C
Confidence            589999999999999999999999986531   1 11  233332                   23455543221 1  0


Q ss_pred             CCccCCCCCCCCCceeEEEEEeCC--HHHHHHHHHhCCCeEEecCCC--CCcceEEE
Q 027489          168 DFKGYHNGNSEPRGFGHIGITVDD--VYKACERFERLGVEFAKKPDG--GKAGSIHC  220 (222)
Q Consensus       168 ~~~~y~~gn~~p~G~~HIaf~VdD--Vdaa~~rL~~~GV~~v~~P~d--G~m~~laF  220 (222)
                          ...   ...+.+||+|.|++  +++++++++++|+++..+|..  +..+.++|
T Consensus        53 ----~~~---~~~~~~hiaf~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f  102 (131)
T cd08363          53 ----RNE---IRQSYTHIAFTIEDSEFDAFYTRLKEAGVNILPGRKRDVRDRKSIYF  102 (131)
T ss_pred             ----cCC---cCccceEEEEEecHHHHHHHHHHHHHcCCcccCCCccccCcceEEEE
Confidence                011   12367899999984  999999999999998766532  23344544

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.17  E-value=6.3e-10  Score=85.15  Aligned_cols=85  Identities=20%  Similarity=0.276  Sum_probs=61.1

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++..+.+    .  ..|+...+..               ....+++....   
T Consensus         4 i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~--~~~l~~~~~~---------------~~~~~~l~~~~---   59 (121)
T cd09013           4 IAHLAHVELLTPKPEESLWFFTDVLGLEETGREG----Q--SVYLRAWGDY---------------EHHSLKLTESP---   59 (121)
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----C--eEEEEeccCC---------------CccEEEEeeCC---
Confidence            4589999999999999999999999999876532    1  2344432110               02345553210   


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEE
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFA  207 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v  207 (222)
                                    ..|..|+||.|+   |+++++++++++|+++.
T Consensus        60 --------------~~~~~h~af~v~~~~~v~~~~~~l~~~G~~~~   91 (121)
T cd09013          60 --------------EAGLGHIAWRASSPEALERRVAALEASGLGIG   91 (121)
T ss_pred             --------------CCceEEEEEEcCCHHHHHHHHHHHHHcCCccc
Confidence                          126789999997   58899999999999974

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.17  E-value=7.9e-10  Score=84.18  Aligned_cols=101  Identities=20%  Similarity=0.213  Sum_probs=60.7

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC-C
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES-D  166 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~-d  166 (222)
                      +.|+.|.|+|++++.+||+++|||++....+  .+.|.  -+..+                   ...+.+........ .
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~--~~~~~-------------------~~~~~~~~~~~~~~~~   57 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYG--ELETG-------------------ETTLAFASHDLAESNL   57 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEE--EecCC-------------------cEEEEEEccccccccc
Confidence            4799999999999999999999999865322  22221  11111                   12222221100000 0


Q ss_pred             C-CCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCC
Q 027489          167 P-DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG  213 (222)
Q Consensus       167 ~-~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG  213 (222)
                      + ...+ ...... .+..|++|.|+|+++++++++++|+++..+|...
T Consensus        58 ~~~~~~-~~~~~~-~~~~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~  103 (125)
T cd07264          58 KGGFVK-ADPAQP-PAGFEIAFVTDDVAAAFARAVEAGAVLVSEPKEK  103 (125)
T ss_pred             ccCccC-CccccC-CCcEEEEEEcCCHHHHHHHHHHcCCEeccCCccC
Confidence            0 0000 000001 2335999999999999999999999998888553

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.17  E-value=9.1e-10  Score=88.30  Aligned_cols=87  Identities=16%  Similarity=0.341  Sum_probs=62.8

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      .+++|+.|.|+|++++++||+++|||++.....  +   ...|+..++.                 ...+.+...     
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~-----------------~~~~~l~~~-----   55 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSD-----------------HHSIAIARG-----   55 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCC-----------------cceEEEccC-----
Confidence            489999999999999999999999999864321  1   1245554321                 234444311     


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHH---HHHHhCCCeEEecCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPD  211 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~---~rL~~~GV~~v~~P~  211 (222)
                             . .    .++.|++|.|+|++++.   ++|+++|+++...|.
T Consensus        56 -------~-~----~~~~hiaf~v~d~~~l~~~~~~l~~~Gi~~~~~~~   92 (144)
T cd07239          56 -------P-H----PSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPG   92 (144)
T ss_pred             -------C-C----CceEEEEEECCCHHHHHHHHHHHHHcCCceeeCCc
Confidence                   0 0    26789999999987775   899999999987663

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.17  E-value=1.8e-10  Score=105.28  Aligned_cols=107  Identities=20%  Similarity=0.385  Sum_probs=72.5

Q ss_pred             CceEEEEEEEEeC--CHHHHHHHHHhccCcEEEEEecCCC--CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           84 NGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        84 ~~~~l~Hv~L~V~--DlekSi~FY~~vLGf~l~~~~~~p~--~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      ...+++|+++.|+  |++++++||+++|||++....+.+.  .......+...+                 +...|+|..
T Consensus       155 ~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~-----------------g~~~i~L~e  217 (353)
T TIGR01263       155 GLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPD-----------------GKVKIPLNE  217 (353)
T ss_pred             CeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCC-----------------CcEEEEEec
Confidence            3557999999999  9999999999999999987655322  111111122111                 246678864


Q ss_pred             cCCCCCC---CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          160 NWGTESD---PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       160 ~~g~e~d---~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      +......   ..+...+.|    .|++||||.|+|+++++++|+++|++++..|.
T Consensus       218 p~~~~~~s~i~~fl~~~~g----~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~  268 (353)
T TIGR01263       218 PASGKDKSQIEEFLEFYNG----AGVQHIALNTDDIVRTVRALRARGVEFLDTPD  268 (353)
T ss_pred             cCCCCCCCHHHHHHHHcCC----CCccEEEEEcCCHHHHHHHHHHcCCccCcCCH
Confidence            3211110   001112334    48999999999999999999999999998874

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.16  E-value=9.4e-10  Score=83.25  Aligned_cols=106  Identities=17%  Similarity=0.246  Sum_probs=66.6

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      +.|+.|.|.|++++++||+++|||++..+   +++.+  .++..++                  ...+.+..........
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~~--~~l~~~~------------------~~~~~l~~~~~~~~~~   57 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRRL--AFFWVGG------------------RGMLLLFDPGATSTPG   57 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCce--EEEEcCC------------------CcEEEEEecCCccccc
Confidence            35899999999999999999999998764   22223  3444432                  2334443321111000


Q ss_pred             CCccCCCCCCCCCceeEEEEEe--CCHHHHHHHHHhCCCeEEecCC-CCCcceEEE
Q 027489          168 DFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPD-GGKAGSIHC  220 (222)
Q Consensus       168 ~~~~y~~gn~~p~G~~HIaf~V--dDVdaa~~rL~~~GV~~v~~P~-dG~m~~laF  220 (222)
                      ..  .. . ....+..|++|.|  +|++++++++.++|+++...+. .+..+.++|
T Consensus        58 ~~--~~-~-~~~~~~~~~~~~v~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~  109 (122)
T cd08354          58 GE--IP-P-HGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYF  109 (122)
T ss_pred             CC--CC-C-CCCCCccEEEEEcCHHHHHHHHHHHHhcCCceeccccCCCCeeEEEE
Confidence            00  00 0 0124778999999  5799999999999999877665 233444443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.16  E-value=7.7e-10  Score=84.98  Aligned_cols=85  Identities=18%  Similarity=0.226  Sum_probs=60.7

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      ++.|+.|.|+|+++|++||+++|||++..+.+  . .  ..|+..++.                 +..+.|...  .   
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~-~--~~~~~~~~~-----------------~~~~~l~~~--~---   54 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D-G--ALYLRMDDR-----------------AWRIAVHPG--E---   54 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC--C-C--eEEEEccCC-----------------ceEEEEEeC--C---
Confidence            57899999999999999999999999865421  1 1  123333221                 234444321  0   


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecC
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKP  210 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P  210 (222)
                              .    .++.|++|.|++   +++++++|+++|+++...|
T Consensus        55 --------~----~~~~~~~f~v~~~~dl~~~~~~l~~~Gv~~~~~~   89 (120)
T cd07252          55 --------A----DDLAYAGWEVADEAALDALAARLRAAGVAVEEGS   89 (120)
T ss_pred             --------C----CceeEEEEEECCHHHHHHHHHHHHHcCCeEEEcC
Confidence                    0    266899999974   8999999999999998765

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>PRK06724 hypothetical protein; Provisional

Probab=99.15  E-value=5.6e-10  Score=88.16  Aligned_cols=88  Identities=16%  Similarity=0.200  Sum_probs=59.1

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhcc---CcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVL---GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vL---Gf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      +..+++|+.|.|+|+++|++||+++|   ||+.....         .| ..+                   ...|-|. .
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~---------~~-~~g-------------------~~~l~l~-~   53 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEV---------AY-STG-------------------ESEIYFK-E   53 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeE---------ee-eCC-------------------CeeEEEe-c
Confidence            56789999999999999999999977   55543211         11 111                   1223232 1


Q ss_pred             CCCCCCCCCccCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEecCCC
Q 027489          161 WGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      +...       ...    ..|..|+||.|   +|+|+++++++++|+++..+|.+
T Consensus        54 ~~~~-------~~~----~~g~~h~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~   97 (128)
T PRK06724         54 VDEE-------IVR----TLGPRHICYQAINRKVVDEVAEFLSSTKIKIIRGPME   97 (128)
T ss_pred             CCcc-------ccC----CCCceeEEEecCChHHHHHHHHHHHHCCCEEecCCcc
Confidence            1110       000    13678999998   78999999999999999877754

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.15  E-value=1.2e-09  Score=82.85  Aligned_cols=96  Identities=20%  Similarity=0.232  Sum_probs=62.5

Q ss_pred             EEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCC
Q 027489           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (222)
Q Consensus        90 Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~  169 (222)
                      +..|.|+|+++|++||+++|||++....    ..+  .++..++.                 ...|.|... .....+. 
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~~~-----------------~~~l~l~~~-~~~~~~~-   58 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDS----DWY--VSLRSPDG-----------------GVELAFMLP-GHETVPA-   58 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEecc----CcE--EEEecCCC-----------------ceEEEEccC-CCCCCcc-
Confidence            5789999999999999999999987642    122  23333221                 245555421 1111010 


Q ss_pred             ccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCC
Q 027489          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK  214 (222)
Q Consensus       170 ~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~  214 (222)
                        .. ......+ .|++|.|+|+++++++++++|+++..+|.+..
T Consensus        59 --~~-~~~~~~~-~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~   99 (119)
T cd08359          59 --AQ-YQFQGQG-LILNFEVDDVDAEYERLKAEGLPIVLPLRDEP   99 (119)
T ss_pred             --hh-cccCCce-EEEEEEECCHHHHHHHHHhcCCCeeeccccCC
Confidence              00 0011124 49999999999999999999999988887644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.14  E-value=5.9e-10  Score=85.60  Aligned_cols=95  Identities=20%  Similarity=0.268  Sum_probs=64.2

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      +++|+.|.|+|++++++||+++|||++....+  +.    .++..+                   +..+.+.....    
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~~----~~~~~~-------------------~~~~~l~~~~~----   51 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--KG----AYLEAG-------------------DLWLCLSVDAN----   51 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--Cc----eEEecC-------------------CEEEEEecCCC----
Confidence            47899999999999999999999999875432  21    233322                   12333422111    


Q ss_pred             CCCccCCCCCCCCCceeEEEEEe--CCHHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~V--dDVdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                           ....    .+..|++|.|  +|+++++++++++|+++..++.+. .+.++|
T Consensus        52 -----~~~~----~~~~hi~f~v~~~dl~~~~~~l~~~G~~~~~~~~~~-~~~~~f   97 (121)
T cd07244          52 -----VGPA----KDYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSE-GDSFYF   97 (121)
T ss_pred             -----CCCC----CCeeeEEEEeCHHHHHHHHHHHHHcCCcccCCCCCC-ccEEEE
Confidence                 1111    2568999998  579999999999999987766542 234444

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.13  E-value=9.1e-10  Score=96.93  Aligned_cols=93  Identities=24%  Similarity=0.349  Sum_probs=64.6

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ...+++|+.|.|+|++++++||+++|||++......+.+.+...|+..++.                 ...+.+..    
T Consensus       133 ~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~----  191 (294)
T TIGR02295       133 SPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG-----------------VHDIALTN----  191 (294)
T ss_pred             cceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC-----------------cCceEeec----
Confidence            567999999999999999999999999998765443333333344432210                 12233321    


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCe--EEecC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVE--FAKKP  210 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~--~v~~P  210 (222)
                              . ++    .|++|+||.|+|   +++++++|+++|++  +...|
T Consensus       192 --------~-~~----~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p  230 (294)
T TIGR02295       192 --------G-NG----PRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGP  230 (294)
T ss_pred             --------C-CC----CceeeEEEEcCCHHHHHHHHHHHHhCCCCcccccCC
Confidence                    0 11    378999999998   55679999999998  55555

The enzyme from Bacillus brevis contains manganese.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.13  E-value=6.6e-10  Score=85.39  Aligned_cols=101  Identities=18%  Similarity=0.154  Sum_probs=62.5

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      ++++.|.|+|+++|++||++ |||++......+  +.. .+ ..++                  ...|.|........  
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~--~~~-~~-~~~~------------------~~~l~l~~~~~~~~--   55 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDE--KAA-CM-VISD------------------NIFVMLLTEDFFQT--   55 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCC--CeE-EE-EECC------------------ceEEEEEcHHHHhh--
Confidence            36789999999999999976 999987533322  221 12 1121                  24566653211100  


Q ss_pred             CCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCCCC
Q 027489          168 DFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGK  214 (222)
Q Consensus       168 ~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~dG~  214 (222)
                       +.........+.+..|++|.|+   ||++++++++++|++++.+|.+..
T Consensus        56 -~~~~~~~~~~~~~~~~l~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~  104 (124)
T cd09012          56 -FTPKPIADTKKSTEVLISLSADSREEVDELVEKALAAGGKEFREPQDHG  104 (124)
T ss_pred             -ccCCCcccCCCCCeEEEEEeCCCHHHHHHHHHHHHHCCCcccCCcccCC
Confidence             0000000001234569999998   588999999999999998887654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.12  E-value=1.3e-09  Score=84.53  Aligned_cols=86  Identities=16%  Similarity=0.223  Sum_probs=62.4

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..++.|+.|.|+|++++++||+++|||++..+.  +  .  ..|+..++.                 +..+.+..  +. 
T Consensus         4 ~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~--~--~--~~~l~~~~~-----------------~~~i~l~~--~~-   57 (124)
T cd08361           4 LQDIAYVRLGTRDLAGATRFATDILGLQVAERT--A--K--ATYFRSDAR-----------------DHTLVYIE--GD-   57 (124)
T ss_pred             EEEeeEEEEeeCCHHHHHHHHHhccCceeccCC--C--C--eEEEEcCCc-----------------cEEEEEEe--CC-
Confidence            468899999999999999999999999986542  1  1  234443321                 23344431  10 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~  211 (222)
                                     .+..|++|.|+|   +++++++++++|+++...+.
T Consensus        58 ---------------~~~~~iaf~v~~~~dv~~~~~~l~~~G~~~~~~~~   92 (124)
T cd08361          58 ---------------PAEQASGFELRDDDALESAATELEQYGHEVRRGTA   92 (124)
T ss_pred             ---------------CceEEEEEEECCHHHHHHHHHHHHHcCCceEEcCH
Confidence                           145799999986   99999999999999876553

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.12  E-value=1.1e-09  Score=87.82  Aligned_cols=87  Identities=16%  Similarity=0.195  Sum_probs=60.8

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCC
Q 027489           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (222)
Q Consensus        89 ~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~  168 (222)
                      .|+.|+|+|++++++||+++|||++..+.+   .  ...|+...+..               ....+.+..         
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~---~--~~~~l~~~~~~---------------~~h~~~~~~---------   51 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE---D--RIVFMRCHPNP---------------FHHTFAVGP---------   51 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC---C--EEEEEEcCCCC---------------Ccceeeecc---------
Confidence            489999999999999999999999876542   1  23565532210               012222210         


Q ss_pred             CccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCC
Q 027489          169 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       169 ~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~d  212 (222)
                         .     ...+++||+|.|+|   +++++++|+++|+++...|..
T Consensus        52 ---~-----~~~gl~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~   90 (141)
T cd07258          52 ---A-----SSSHFHHVNFMVTDIDDIGKALYRIKAHDVKVVFGPGR   90 (141)
T ss_pred             ---C-----CCCceEEEEEECCCHHHHHHHHHHHHHCCCcEEeCCce
Confidence               0     01488999999986   457799999999999887754

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.11  E-value=1.1e-09  Score=83.17  Aligned_cols=94  Identities=20%  Similarity=0.324  Sum_probs=56.7

Q ss_pred             EEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCC
Q 027489           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (222)
Q Consensus        90 Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~  169 (222)
                      |++|.|+|+++|++||+++|||++....+    .+  .++..+                   +..+.|........+.. 
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~-------------------~~~~~l~~~~~~~~~~~-   55 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFF-------------------GHQLVAHLSPNFNADAS-   55 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--cccccc-------------------CcEEEEEeccCCCcccc-
Confidence            99999999999999999999999865321    11  222221                   12233321111100000 


Q ss_pred             ccCCCCCCCCCceeEEE--EEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          170 KGYHNGNSEPRGFGHIG--ITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       170 ~~y~~gn~~p~G~~HIa--f~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .....+  ...+..|++  |.++|+++++++|+++|+++..+|.
T Consensus        56 ~~~~~~--~~~~~~h~~~~~~~~dv~~~~~~l~~~g~~~~~~p~   97 (125)
T cd08357          56 DNAVDG--HPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPY   97 (125)
T ss_pred             cCCCCC--CccCCceEEEEEeHHHHHHHHHHHHHCCCcEecCcc
Confidence            000011  112456775  4668999999999999999987764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.09  E-value=1.7e-09  Score=95.37  Aligned_cols=93  Identities=23%  Similarity=0.430  Sum_probs=63.8

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC--C-cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--M-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~--~-~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      ...+|+|++|.|+|++++++||+++|||++......+.  + .+..+|+..++.                 ...+.+...
T Consensus       139 ~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~-----------------~~~~~l~~~  201 (286)
T TIGR03213       139 GDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER-----------------HHSLAFAAG  201 (286)
T ss_pred             CCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC-----------------cceEEEecC
Confidence            35789999999999999999999999999876543321  1 123456554321                 223444211


Q ss_pred             CCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHH---HHHHHHhCCCeEEecC
Q 027489          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKP  210 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVda---a~~rL~~~GV~~v~~P  210 (222)
                                  ..    ..+++|+||.|+|+++   ++++|+++|+ ....|
T Consensus       202 ------------~~----~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~-~~~~~  237 (286)
T TIGR03213       202 ------------PS----EKRLNHLMLEVDTLDDVGLALDRVDADGI-VASTL  237 (286)
T ss_pred             ------------CC----CCceEEEEEEcCCHHHHHHHHHHHHHCCC-EEecC
Confidence                        00    1378999999998666   8999999999 44444

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.09  E-value=2.4e-09  Score=80.61  Aligned_cols=87  Identities=21%  Similarity=0.326  Sum_probs=59.7

Q ss_pred             EEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCc
Q 027489           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (222)
Q Consensus        91 v~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~  170 (222)
                      ..|.|+|++++++||+++|||++...    .+ + ..++..++.                ....+.+....+        
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~-~-~~~~~~~~~----------------~~~~~~~~~~~~--------   53 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMD----HG-W-IATFASPQN----------------MTVQVSLATEGG--------   53 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEc----CC-c-eEEEeecCC----------------CCcEEEEecCCC--------
Confidence            46899999999999999999998643    11 1 233332210                024455542110        


Q ss_pred             cCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCC
Q 027489          171 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK  214 (222)
Q Consensus       171 ~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~  214 (222)
                       .  +    .+..|++|.|+|+++++++|+++|+++..+|.+..
T Consensus        54 -~--~----~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~   90 (112)
T cd07238          54 -T--A----TVVPDLSIEVDDVDAALARAVAAGFAIVYGPTDEP   90 (112)
T ss_pred             -C--C----CCCCEEEEEeCCHHHHHHHHHhcCCeEecCCccCC
Confidence             0  1    13469999999999999999999999998886543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.09  E-value=1.9e-09  Score=82.08  Aligned_cols=88  Identities=26%  Similarity=0.324  Sum_probs=61.3

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..++.|+.|.|+|++++++||+++|||++....+    .+  .|+...+..               ....+.+...  . 
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~--~~~~~~~~~---------------~~~~~~~~~~--~-   57 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DR--IYLRGLEEF---------------IHHSLVLTKA--P-   57 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----Ce--EEEEecCCC---------------ceEEEEEeeC--C-
Confidence            4589999999999999999999999999865421    12  233321100               0223333211  0 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEecC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~~P  210 (222)
                                    ..++.|++|.|   +|+++++++++++|+++...|
T Consensus        58 --------------~~~~~hi~~~v~~~~dv~~~~~~l~~~g~~~~~~~   92 (121)
T cd07266          58 --------------VAGLGHIAFRVRSEEDLDKAEAFFQELGLPTEWVE   92 (121)
T ss_pred             --------------CCceeEEEEECCCHHHHHHHHHHHHHcCCCccccc
Confidence                          12678999999   479999999999999997654

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.09  E-value=2e-09  Score=82.11  Aligned_cols=92  Identities=14%  Similarity=0.121  Sum_probs=62.5

Q ss_pred             EEEEEEEeCCHHHHHHHHHhc---cCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRV---LGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~v---LGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ++|+.|.|+|+++|++||+++   |||++..+.  .+ .+ +.| ..++                 ....+.|..+.+..
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~-~~-~~~-~~~~-----------------~~~~~~l~~~~~~~   58 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP-GA-VGY-GKGG-----------------GGPDFWVTKPFDGE   58 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC-ce-eEe-ccCC-----------------CCceEEEeccccCC
Confidence            579999999999999999999   699986543  11 22 223 2221                 13456665432111


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .      ..     +.+..|++|.|+|   +++++++++++|+++..+|.+
T Consensus        59 ~------~~-----~~~~~hi~f~v~~~~~v~~~~~~~~~~g~~~~~~~~~   98 (123)
T cd07262          59 P------AT-----AGNGTHVAFAAPSREAVDAFHAAALAAGGTDEGAPGL   98 (123)
T ss_pred             C------CC-----CCCceEEEEECCCHHHHHHHHHHHHHcCCccCCCCCC
Confidence            0      11     1244799999987   788999999999999888755

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.08  E-value=2.3e-09  Score=81.13  Aligned_cols=86  Identities=16%  Similarity=0.283  Sum_probs=60.7

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      -+|+|+.|.|+|++++++||+++|||+.....+    ++  .++..++.                ....+.+...   . 
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~~----------------~~~~~~~~~~---~-   55 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GI--VYLRATGS----------------EHHILRLRRS---D-   55 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CE--EEEECCCC----------------ccEEEEeccC---C-
Confidence            378999999999999999999999999875421    22  24442210                0122333210   0 


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEecC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~~P  210 (222)
                                   ..++.|++|.|   +|+++++++++++|+++..+|
T Consensus        56 -------------~~~~~~~~~~v~~~~~l~~~~~~l~~~G~~~~~~~   90 (120)
T cd08362          56 -------------RNRLDVVSFSVASRADVDALARQVAARGGTVLSEP   90 (120)
T ss_pred             -------------CCCCceEEEEeCCHHHHHHHHHHHHHcCCceecCC
Confidence                         02567999999   568999999999999998765

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.08  E-value=2.7e-09  Score=80.82  Aligned_cols=95  Identities=17%  Similarity=0.271  Sum_probs=60.3

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      +|.|+.|.|+|++++.+||+ +|||++..+.   + ..  .+...++.                 ...+.+...  . . 
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~-~~--~~~~~~~~-----------------~~~~~~~~~--~-~-   53 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG---D-GL--ELRTAGND-----------------HRWARLLEG--A-R-   53 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C-ce--EEEecCCC-----------------ceEEEeecC--C-C-
Confidence            68999999999999999997 7999986542   1 11  23222210                 123333211  0 0 


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                               .  .....++.|.++|+++++++++++|++++.+|..+....++|
T Consensus        54 ---------~--~~~~~~~~~~~~d~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~   96 (112)
T cd08344          54 ---------K--RLAYLSFGIFEDDFAAFARHLEAAGVALAAAPPGADPDGVWF   96 (112)
T ss_pred             ---------C--ceeeEEEEeEhhhHHHHHHHHHHcCCceecCCCcCCCCEEEE
Confidence                     0  012234555668999999999999999987764444445544

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.04  E-value=2.3e-09  Score=80.33  Aligned_cols=83  Identities=24%  Similarity=0.401  Sum_probs=57.4

Q ss_pred             EEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCC
Q 027489           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (222)
Q Consensus        90 Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~  169 (222)
                      |+.|.|+|++++++||+++|||++..+.+  .    ..++..+                   +..+.+.....       
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~----~~~~~~~-------------------~~~l~~~~~~~-------   48 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K----EAYFELA-------------------GLWICLMEEDS-------   48 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c----eeEEEec-------------------CeEEEeccCCC-------
Confidence            89999999999999999999999876532  1    1223322                   23444432211       


Q ss_pred             ccCCCCCCCCCceeEEEEEe--CCHHHHHHHHHhCCCeEEec
Q 027489          170 KGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKK  209 (222)
Q Consensus       170 ~~y~~gn~~p~G~~HIaf~V--dDVdaa~~rL~~~GV~~v~~  209 (222)
                        . .+  .+.++.|++|.|  +|+++++++++++|+++...
T Consensus        49 --~-~~--~~~~~~hiaf~v~~~d~~~~~~~l~~~G~~~~~~   85 (113)
T cd08345          49 --L-QG--PERTYTHIAFQIQSEEFDEYTERLKALGVEMKPE   85 (113)
T ss_pred             --c-CC--CCCCccEEEEEcCHHHHHHHHHHHHHcCCccCCC
Confidence              0 00  113678999999  47999999999999998754

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.03  E-value=4.6e-09  Score=79.12  Aligned_cols=89  Identities=24%  Similarity=0.412  Sum_probs=60.4

Q ss_pred             EEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCc
Q 027489           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (222)
Q Consensus        91 v~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~  170 (222)
                      +.|.|+|+++|++||+++|||++....  +  .+..  +..++                  +..+.+....+...     
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~--~--~~~~--~~~~~------------------~~~~~l~~~~~~~~-----   52 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS--P--TFAL--FVLGS------------------GVKLGLWSRHTVEP-----   52 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC--C--ceEE--EEeCC------------------CcEEEEeeccccCC-----
Confidence            679999999999999999999976532  1  2322  22221                  24566653322110     


Q ss_pred             cCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCC
Q 027489          171 GYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       171 ~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~d  212 (222)
                       ....   ..+..|++|.|+|   +++++++++++|+++..+|.+
T Consensus        53 -~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~v~~~~~~   93 (114)
T cd07261          53 -ASDA---TGGGSELAFMVDDGAAVDALYAEWQAKGVKIIQEPTE   93 (114)
T ss_pred             -CCCC---CCCceEEEEEcCCHHHHHHHHHHHHHCCCeEecCccc
Confidence             0000   1356899999975   889999999999999988865

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.03  E-value=2.7e-09  Score=81.32  Aligned_cols=99  Identities=16%  Similarity=0.145  Sum_probs=59.5

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC-C
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES-D  166 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~-d  166 (222)
                      |+|++|.|+|+++|++||+. |||++....+  ...+  ..+..++                  +..|.|........ .
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~--~~~~--~~~~~~~------------------~~~l~l~~~~~~~~~~   57 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEAD--DEPH--VEAVLPG------------------GVRLAWDTVESIRSFT   57 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcC--CCCc--EEEEeCC------------------CEEEEEEcccceeeec
Confidence            57999999999999999964 9999754321  1111  2222221                  12333321100000 0


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCCCCc
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKA  215 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~dG~m  215 (222)
                      +.   ..   ....+..|++|.|+   |+++++++++++|+++..+|.+..+
T Consensus        58 ~~---~~---~~~~~~~~l~~~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~  103 (122)
T cd07235          58 PG---WT---PTGGHRIALAFLCETPAEVDALYAELVGAGYPGHKEPWDAPW  103 (122)
T ss_pred             CC---CC---CCCCCcEEEEEEcCCHHHHHHHHHHHHHCCCCcCCCCccCCC
Confidence            00   00   00124468888765   8999999999999999988876554

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.02  E-value=5.2e-09  Score=92.14  Aligned_cols=98  Identities=22%  Similarity=0.336  Sum_probs=67.3

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++..+.+    .+  .|+...+..               ....+.|....   
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~~--~~~~~~~~~---------------~~~~l~l~~~~---   57 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK----EY--IYLRGIEEF---------------QHHSLVLTKAP---   57 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----Ce--EEEeccCcC---------------CceEEEeeeCC---
Confidence            4689999999999999999999999999876521    12  233211100               01234443210   


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                                +    .++.|++|.|+   |+++++++|+++|+++...+..+..+.++|
T Consensus        58 ----------~----~~~~hiaf~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~  102 (294)
T TIGR02295        58 ----------S----AALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRV  102 (294)
T ss_pred             ----------C----cCccEEEEEeCCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEE
Confidence                      0    25789999997   789999999999999987665544454444

The enzyme from Bacillus brevis contains manganese.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.02  E-value=9.2e-09  Score=76.47  Aligned_cols=87  Identities=25%  Similarity=0.319  Sum_probs=60.6

Q ss_pred             EEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCcc
Q 027489           92 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG  171 (222)
Q Consensus        92 ~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~~  171 (222)
                      .|.|+|++++++||+++|||++.....  ...  +.++..+                   +..++|....+...      
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~~--~~~~~~~-------------------~~~~~l~~~~~~~~------   53 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EPG--YAFLSRG-------------------GAQLMLSEHDGDEP------   53 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CCc--EEEEEeC-------------------CEEEEEeccCCCCC------
Confidence            489999999999999999999876542  122  2344432                   35666654322110      


Q ss_pred             CCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCe-EEecCCC
Q 027489          172 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVE-FAKKPDG  212 (222)
Q Consensus       172 y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~-~v~~P~d  212 (222)
                      .     ...+..|++|.|+|++++.++++++|++ +..+|..
T Consensus        54 ~-----~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~   90 (112)
T cd08349          54 V-----PLGRGGSVYIEVEDVDALYAELKAKGADLIVYPPED   90 (112)
T ss_pred             C-----CCCCcEEEEEEeCCHHHHHHHHHHcCCcceecCccC
Confidence            1     1124569999999999999999999999 5666654

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.02  E-value=9.6e-09  Score=78.02  Aligned_cols=85  Identities=12%  Similarity=0.091  Sum_probs=59.2

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      .++.|+.|.|+|++++.+||++ |||++..+.+  +  .  .|+..++.                 ...+.+.. .+   
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~--~--~~~~~~~~-----------------~~~~~~~~-~~---   53 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D--E--LYYRGYGT-----------------DPFVYVAR-KG---   53 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C--e--EEEecCCC-----------------ccEEEEcc-cC---
Confidence            4789999999999999999999 9999865421  1  1  23332210                 11222211 10   


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P  210 (222)
                              .    ..++.|++|.|+|.+++.+.++++|+.+...+
T Consensus        54 --------~----~~~~~~~af~v~~~~~~~~~~~~~g~~~~~~~   86 (113)
T cd07267          54 --------E----KARFVGAAFEAASRADLEKAAALPGASVIDDL   86 (113)
T ss_pred             --------C----cCcccEEEEEECCHHHHHHHHHcCCCeeecCC
Confidence                    0    12678999999999999999999999987654

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=98.98  E-value=2.5e-09  Score=79.34  Aligned_cols=87  Identities=25%  Similarity=0.387  Sum_probs=59.1

Q ss_pred             EEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCccC
Q 027489           93 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY  172 (222)
Q Consensus        93 L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~~y  172 (222)
                      |.|+|++++++||+++|||++....+    .+..+..+...                 .....++.......       .
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~~~-----------------~~~~~~~~~~~~~~-------~   52 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLGFRF-----------------HDGVIEFLQFPDPP-------G   52 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEETEEE-----------------EEEEEEEEEEESSS-------S
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEeccch-----------------hhhhHHHccCCccc-------c
Confidence            68999999999999999999988432    22222221100                 01233444321110       0


Q ss_pred             CCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          173 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       173 ~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                           .+.+..|++|.|+|+++++++++++|++++.+|.+
T Consensus        53 -----~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~   87 (108)
T PF12681_consen   53 -----PPGGGFHLCFEVEDVDALYERLKELGAEIVTEPRD   87 (108)
T ss_dssp             -----SSSSEEEEEEEESHHHHHHHHHHHTTSEEEEEEEE
T ss_pred             -----CCCceeEEEEEEcCHHHHHHHHHHCCCeEeeCCEE
Confidence                 12367899999999999999999999999888765

...

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.98  E-value=1.4e-08  Score=77.19  Aligned_cols=87  Identities=28%  Similarity=0.424  Sum_probs=59.1

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCC
Q 027489           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (222)
Q Consensus        89 ~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~  168 (222)
                      .|+.|.|+|++++.+||+++||++.....  +  .+. .|.. .+.                 ...+.+..+  ...   
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~--~--~~~-~~~~-~~~-----------------~~~~~~~~~--~~~---   54 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVR--D--DYA-KFLL-EDP-----------------RLNFVLNER--PGA---   54 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEeccc--C--Cee-EEEe-cCC-----------------ceEEEEecC--CCC---
Confidence            49999999999999999999999976542  1  121 2221 110                 122323211  100   


Q ss_pred             CccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCC
Q 027489          169 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       169 ~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~d  212 (222)
                            .   ..+..|++|.|+|   +++++++++++|+++...|..
T Consensus        55 ------~---~~~~~h~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~   92 (120)
T cd07254          55 ------P---GGGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDT   92 (120)
T ss_pred             ------C---CCCeeEEEEEeCCHHHHHHHHHHHHHcCCeEEccCCc
Confidence                  0   0267899999987   788999999999999877654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=98.97  E-value=9.1e-09  Score=91.19  Aligned_cols=89  Identities=25%  Similarity=0.348  Sum_probs=62.9

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .++++|+.|.|+|++++++||+++|||++..+.+  .   . .++...+..               ....+.+...    
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~--~---~-~~~~~~~~~---------------~~~~~~l~~~----   56 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG--Q---R-VYLKAWDEW---------------DHYSVILTEA----   56 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC--c---e-EEEEecccc---------------ccceEeeccC----
Confidence            4689999999999999999999999999876532  1   1 233321100               0223433211    


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                               .    ..|+.|++|.|+   |+++++++|+++|+++...|.
T Consensus        57 ---------~----~~g~~hiaf~v~~~~dl~~~~~~l~~~G~~~~~~~~   93 (303)
T TIGR03211        57 ---------D----TAGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPA   93 (303)
T ss_pred             ---------C----CCceeEEEEEeCCHHHHHHHHHHHHHcCCCeeeccC
Confidence                     0    136789999998   799999999999999987664

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.95  E-value=2.5e-09  Score=99.74  Aligned_cols=105  Identities=12%  Similarity=0.238  Sum_probs=73.5

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCC-----cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-----KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~-----~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      ..+++|+++.|+|++.+++||+++|||+..+..+.++.     +.....+..++                 +...|+|..
T Consensus       178 l~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~-----------------g~v~ipLnE  240 (398)
T PLN02875        178 LRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN-----------------EMVLLPLNE  240 (398)
T ss_pred             cceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC-----------------CcEEEEecc
Confidence            45899999999999999999999999998876554321     12333444322                 145677765


Q ss_pred             cCCC---CC-CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhC----CCeEEecC
Q 027489          160 NWGT---ES-DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL----GVEFAKKP  210 (222)
Q Consensus       160 ~~g~---e~-d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~----GV~~v~~P  210 (222)
                      ....   .+ ...|...+.|    .|++||||.|+|+.+++++|+++    |++|+..|
T Consensus       241 P~~~~~~~SqI~eFL~~~~G----~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        241 PTFGTKRKSQIQTYLEHNEG----PGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             CCCCCCCcChHHHHHHhcCC----CCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            3211   11 0112112333    49999999999999999999999    99999866

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=98.93  E-value=1.7e-08  Score=77.13  Aligned_cols=78  Identities=17%  Similarity=0.165  Sum_probs=55.1

Q ss_pred             EEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCc
Q 027489           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (222)
Q Consensus        91 v~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~  170 (222)
                      ..|.|+|+++|++||++ |||++..+.+  . .+  .++..+                   +..|+|......       
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~~--~-~~--~~~~~~-------------------~~~l~l~~~~~~-------   53 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQA--A-GY--MILRRG-------------------DLELHFFAHPDL-------   53 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecCC--C-CE--EEEEcC-------------------CEEEEEEecCcC-------
Confidence            57999999999999999 9999876532  1 22  334432                   346777643211       


Q ss_pred             cCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeE
Q 027489          171 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF  206 (222)
Q Consensus       171 ~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~  206 (222)
                        ..+    ....|++|.|+|+++++++++++|+++
T Consensus        54 --~~~----~~~~~~~~~v~dvd~~~~~l~~~G~~~   83 (120)
T cd08350          54 --DPA----TSPFGCCLRLPDVAALHAEFRAAGLPE   83 (120)
T ss_pred             --CCC----CCcceEEEEeCCHHHHHHHHHHhCccc
Confidence              000    123589999999999999999999985

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.88  E-value=1.7e-08  Score=92.29  Aligned_cols=103  Identities=20%  Similarity=0.213  Sum_probs=70.6

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      +.++|+.+.|+|++++++||.+.|||++.........+... .+..+                   ...|+|....+..+
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~~~~-~~~~G-------------------~~~l~L~~~~~~~s   60 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASH-VLRQG-------------------QINFVLTAPYSSDS   60 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCceeEE-EEEeC-------------------CEEEEEecCCCCCc
Confidence            36899999999999999999999999998762222222111 12221                   46788875432211


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                       + ...+..  ..+.|..|+||.|+|+++++++++++|++++.+|.+
T Consensus        61 -~-~~~~~~--~hg~gv~~iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~  103 (353)
T TIGR01263        61 -P-AADFAA--KHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVE  103 (353)
T ss_pred             -h-HHHHHH--hCCCceEEEEEEECCHHHHHHHHHHCCCEeccCCcc
Confidence             0 000111  012488999999999999999999999999988754

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=98.86  E-value=2.9e-08  Score=87.50  Aligned_cols=86  Identities=17%  Similarity=0.226  Sum_probs=61.6

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      .++.|+.|.|+|+++|++||+++|||++....  +++  . .|+..++.                 +..+.|... +   
T Consensus         2 ~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~--~~~--~-~~~~~~~~-----------------~~~~~l~~~-~---   55 (286)
T TIGR03213         2 RGLGYLGIGVSDVDAWREFATEVLGMMVASEG--END--A-LYLRLDSR-----------------AHRIAVHPG-E---   55 (286)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhccCcccccCC--CCc--e-EEEEcCCC-----------------ceEEEEEEC-C---
Confidence            47899999999999999999999999975431  111  1 24343321                 233444321 0   


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKP  210 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P  210 (222)
                                   ..++.|++|.|+|   ++++.++|+++|+++...|
T Consensus        56 -------------~~~~~~~~f~V~~~~~l~~~~~~L~~~Gv~~~~~~   90 (286)
T TIGR03213        56 -------------SDDLAYAGWEVADEAGLDQVKEKLEKAGVAVTVAS   90 (286)
T ss_pred             -------------cCCeeeEeeeeCCHHHHHHHHHHHHHcCCceEECC
Confidence                         0256799999998   8899999999999998765

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=98.79  E-value=1.2e-07  Score=75.62  Aligned_cols=106  Identities=20%  Similarity=0.217  Sum_probs=70.3

Q ss_pred             CCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      ..+...+.|.-|.|.|++++++||.+|||+++....+..++.+  +.+..++.    +.           +..+  ....
T Consensus         4 ~~~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y--~~f~~~~~----~~-----------gG~l--~~~~   64 (127)
T COG3324           4 AGEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRY--AVFPADGA----GA-----------GGGL--MARP   64 (127)
T ss_pred             cccCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceE--EEEECCCc----cc-----------ccee--ccCC
Confidence            3456678899999999999999999999999987644433333  33332221    00           1121  1110


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCC-cceEE
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-AGSIH  219 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~-m~~la  219 (222)
                      .         +..+    .+..++.|.|+|+|+..+|.+++|..+++++..-+ ...++
T Consensus        65 ~---------~~p~----~~~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a  110 (127)
T COG3324          65 G---------SPPG----GGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIA  110 (127)
T ss_pred             c---------CCCC----CCCEEEEEecCChHHHHHHHHhcCCeEEecccccCCceEEE
Confidence            0         1111    13358999999999999999999999999887644 44443

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.76  E-value=1.3e-07  Score=71.23  Aligned_cols=94  Identities=16%  Similarity=0.116  Sum_probs=58.2

Q ss_pred             EEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCc
Q 027489           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (222)
Q Consensus        91 v~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~  170 (222)
                      |.|.|+|++++.+||+++|||++..+ .  +..+  .++..+                   +..++|...........  
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~-~--~~~~--~~~~~~-------------------~~~~~l~~~~~~~~~~~--   55 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD-S--NDGV--AFFQLG-------------------GLVLALFPREELAKDAG--   55 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc-C--CCce--EEEEcC-------------------CeEEEEecchhhhhhcC--
Confidence            67999999999999999999998765 1  1122  344432                   34566653221100000  


Q ss_pred             cCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEecCCC
Q 027489          171 GYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       171 ~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                       ..... ...+..|++|.+   +|+++++++++++|+++..+|..
T Consensus        56 -~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~   98 (121)
T cd07251          56 -VPVPP-PGFSGITLAHNVRSEEEVDAVLARAAAAGATIVKPPQD   98 (121)
T ss_pred             -CCCCC-CCccceEEEEEcCCHHHHHHHHHHHHhCCCEEecCCcc
Confidence             00000 011334566655   68999999999999999877754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.74  E-value=1.2e-07  Score=72.47  Aligned_cols=77  Identities=19%  Similarity=0.243  Sum_probs=52.5

Q ss_pred             EEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCc
Q 027489           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (222)
Q Consensus        91 v~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~  170 (222)
                      ..|.|+|+++|++||++ |||++..+.  +  .+  .++..+                   +..+.|... ..+.     
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~--~--~~--~~l~~~-------------------~~~l~l~~~-~~~~-----   52 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEN--D--NL--AYFRLG-------------------NCAFYLQDY-YVKD-----   52 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecC--C--CE--EEEEcC-------------------CEEEEeecC-CCcc-----
Confidence            35889999999999987 999997652  2  22  444433                   234444321 1100     


Q ss_pred             cCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEE
Q 027489          171 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA  207 (222)
Q Consensus       171 ~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v  207 (222)
                       .       .+..|++|.|+|+++++++|+++|+++.
T Consensus        53 -~-------~~~~~~~~~v~did~~~~~l~~~G~~~~   81 (113)
T cd08356          53 -W-------AENSMLHLEVDDLEAYYEHIKALGLPKK   81 (113)
T ss_pred             -c-------ccCCEEEEEECCHHHHHHHHHHcCCccc
Confidence             0       1225899999999999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.37  E-value=1e-05  Score=65.21  Aligned_cols=94  Identities=22%  Similarity=0.293  Sum_probs=62.8

Q ss_pred             EEEeC-CHHHHHHHHHhccCcEEEEEecCCCC----------cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           92 MFRIK-DPKVSLDFYSRVLGMSLLKRLDFPEM----------KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        92 ~L~V~-DlekSi~FY~~vLGf~l~~~~~~p~~----------~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      .|.++ |.+++++||+++||.++..+..++++          ...+.-|..+                   +..|.+...
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~-------------------g~~im~sd~   65 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG-------------------GSTIMLSDA   65 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC-------------------CEEEEEecC
Confidence            47788 99999999999999999998887763          2222222222                   234444332


Q ss_pred             CCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCC
Q 027489          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG  213 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG  213 (222)
                      .+...      .+.++   .--.-|-+.++|++++++++.+.|++++.++++.
T Consensus        66 ~~~~~------~~~~~---~~s~~l~~~~~d~da~f~~a~~aGa~v~mpl~~~  109 (136)
T COG2764          66 FPDMG------ATEGG---GTSLSLDLYVEDVDAVFERAAAAGATVVMPLEDT  109 (136)
T ss_pred             CCccC------cccCC---CeeEEEEEEehHHHHHHHHHHhcCCeEEecchhc
Confidence            22111      22222   1123567788899999999999999999998763

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.35  E-value=2e-06  Score=70.82  Aligned_cols=98  Identities=15%  Similarity=0.282  Sum_probs=53.6

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      |+|+.+.|+|++++.++|++.|||++......+.++.....+-.+                   ..+|||+...+....+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~-------------------~~YlEli~i~~~~~~~   61 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG-------------------DGYLELIAIDPEAPAP   61 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S-------------------SSEEEEEEES-HHHST
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC-------------------CceEEEEEeCCccccc
Confidence            689999999999999999999999999877666533333333332                   2399998642211111


Q ss_pred             CCccCCCC--C-CCCCceeEEEEEeCCHHHHHHHHHhCCCe
Q 027489          168 DFKGYHNG--N-SEPRGFGHIGITVDDVYKACERFERLGVE  205 (222)
Q Consensus       168 ~~~~y~~g--n-~~p~G~~HIaf~VdDVdaa~~rL~~~GV~  205 (222)
                      .. +...+  . ....|+.++|+.++|+++..+++++.|+.
T Consensus        62 ~~-~~~~~~~~~~~~~g~~~~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   62 DR-GRWFGLDRLAGGEGLYGWALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             GG-GT-TTTHHHHT--EEEEEEEE-S-HHHHHHHHHTTT-E
T ss_pred             cc-ccceechhhcCCCCeEEEEEecCCHHHHHHHHHhcCCC
Confidence            00 00000  0 01258899999999999999999999986

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.34  E-value=6.3e-07  Score=78.16  Aligned_cols=89  Identities=28%  Similarity=0.511  Sum_probs=67.4

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      +.+++|+|.|+++|+.||.+.|||++...    +.++....|+|+++                 ...|||+++.+.-.  
T Consensus       150 v~~V~l~VgdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~-----------------q~~LElt~~~~~id--  206 (299)
T KOG2943|consen  150 VLQVMLNVGDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDE-----------------QCVLELTYNYDVID--  206 (299)
T ss_pred             eEEEEEEehhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCc-----------------ceEEEEEeccCccc--
Confidence            67899999999999999999999999875    23456677898763                 57899998865432  


Q ss_pred             CCccCCCCCCCCCceeEEEEEe--CCHHHHHHHHHhCCCeEEec
Q 027489          168 DFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKK  209 (222)
Q Consensus       168 ~~~~y~~gn~~p~G~~HIaf~V--dDVdaa~~rL~~~GV~~v~~  209 (222)
                          +..      |++.|+|.+  +|+..+.+.++..+-++..+
T Consensus       207 ----~~k------g~griafaip~d~~~~l~e~iK~~n~~i~~~  240 (299)
T KOG2943|consen  207 ----RAK------GFGRIAFAIPTDDLPKLQEAIKSANGTILTP  240 (299)
T ss_pred             ----ccc------cceeEEEeccccccccHHHHHHHhccccccc
Confidence                332      567777776  57888888888886555443

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.32  E-value=1.1e-05  Score=71.42  Aligned_cols=95  Identities=17%  Similarity=0.306  Sum_probs=68.5

Q ss_pred             cCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           81 EATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        81 ~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      +.+..+.+..+.|.|+|+++...||+++||+++..+.+      ..+-++.++                  ...|.|.++
T Consensus         4 ~~~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg------------------~~LL~L~q~   59 (265)
T COG2514           4 ALTTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGG------------------TPLLTLEQF   59 (265)
T ss_pred             ccCCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCC------------------EEEEEEEeC
Confidence            34567899999999999999999999999999988643      123455543                  245666554


Q ss_pred             CCCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEe
Q 027489          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAK  208 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~  208 (222)
                      ......+    +.     .-|+.|++|.+++   +..++.++.+.|+.+..
T Consensus        60 ~~a~~~~----~~-----~aGLyH~AfLlP~r~~L~~~l~hl~~~~~~l~G  101 (265)
T COG2514          60 PDARRPP----PR-----AAGLYHTAFLLPTREDLARVLNHLAEEGIPLVG  101 (265)
T ss_pred             CCCCCCC----cc-----ccceeeeeeecCCHHHHHHHHHHHHhcCCcccc
Confidence            3322110    11     1388999999986   77788999999998863

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.20  E-value=6.3e-06  Score=64.68  Aligned_cols=97  Identities=22%  Similarity=0.285  Sum_probs=59.8

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      ..+-|++|.|.|++++.+||.++||++.....+.-   ..+-|.|.                    ...++|........
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd~w---vdfDfyGH--------------------Q~v~Hl~~q~~~~~   59 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRSTDTW---VDFDFYGH--------------------QVVAHLTPQPDSQG   59 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccccceE---EEeeeccc--------------------EEEEEecCCccccc
Confidence            44569999999999999999999999986543210   11122231                    23444543221111


Q ss_pred             CCCCccCCCCCCCCCceeEE--EEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHI--GITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HI--af~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      +..   . .|..-  ..-|+  .+.++|..++.+||+++|+.+..+|.
T Consensus        60 ~g~---V-~~~~v--~~pHfGvVl~~edW~alaerlea~gi~~~i~P~  101 (138)
T COG3565          60 SGK---V-DGHGV--PPPHFGVVLPVEDWFALAERLEAAGIPFHIPPK  101 (138)
T ss_pred             Ccc---c-CCCCC--CCccceEEEEHHHHHHHHHHHHHcCCCcccCce
Confidence            100   1 11101  12244  45678999999999999999988873

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.15  E-value=7.1e-05  Score=58.28  Aligned_cols=91  Identities=12%  Similarity=0.081  Sum_probs=55.0

Q ss_pred             EEEe-CCHHHHHHHHHhccCcEEEEEecCCCC----------cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           92 MFRI-KDPKVSLDFYSRVLGMSLLKRLDFPEM----------KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        92 ~L~V-~DlekSi~FY~~vLGf~l~~~~~~p~~----------~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      .|.+ .|.+++++||+++||+++......++.          .+.+..+..+                   +..|.+...
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~-------------------g~~l~~~d~   64 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG-------------------GQRLMASDG   64 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC-------------------CEEEEEEcC
Confidence            4677 999999999999999999876543221          1112222221                   234444322


Q ss_pred             CCCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCC
Q 027489          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG  213 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG  213 (222)
                      .. +.    . ...     .+-.++++.|+|   +++++++|.+.| +++.+|.+.
T Consensus        65 ~~-~~----~-~~~-----~~~~~l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~  108 (128)
T cd06588          65 GP-GF----P-FTF-----GNGISLSVECDSEEEADRLFEALSEGG-TVLMPLQKT  108 (128)
T ss_pred             CC-CC----C-CCC-----CCCEEEEEECCCHHHHHHHHHHHhcCC-eEeccchhc
Confidence            11 10    0 101     123579999986   777889987776 777777654

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.96  E-value=9e-06  Score=74.31  Aligned_cols=106  Identities=19%  Similarity=0.314  Sum_probs=71.2

Q ss_pred             ceEEEEEEEEeC--CHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           85 GYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        85 ~~~l~Hv~L~V~--DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      -..++|+...|+  .++....||+++|||+....++.++ +....+-.                .+.+....|.|.-|..
T Consensus       165 ~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~-p~tgl~Sr----------------am~Sp~G~vrlplN~s  227 (363)
T COG3185         165 LTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPG-PITGLRSR----------------AMVSPCGKVRLPLNES  227 (363)
T ss_pred             ceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccC-CcccEEEe----------------eEecCCCcEEeecccC
Confidence            358999986665  8999999999999999998877764 22222110                1111223455554432


Q ss_pred             CCCCCCC-ccC---CCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          163 TESDPDF-KGY---HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       163 ~e~d~~~-~~y---~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .. +..+ ..+   ..|    .|++||+|.++|+.+++++++++|+++...|+.
T Consensus       228 ~~-~~sqi~efl~~y~G----~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~t  276 (363)
T COG3185         228 AD-DKSQIGEFLREYRG----EGIQHIAFGTDDIYATVAALRERGVKFLPIPET  276 (363)
T ss_pred             CC-chhHHHHHHHHhCC----CcceEEEecccHHHHHHHHHHHcCCccCCCchh
Confidence            21 1110 001   123    489999999999999999999999999987753

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=97.82  E-value=2.7e-05  Score=57.42  Aligned_cols=34  Identities=29%  Similarity=0.493  Sum_probs=30.7

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF  119 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~  119 (222)
                      ++++|++|.|+|+++|++||+++|||++......
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~   34 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVN   34 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeeccc
Confidence            4689999999999999999999999999887543

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=97.52  E-value=0.00066  Score=54.00  Aligned_cols=105  Identities=15%  Similarity=0.169  Sum_probs=63.2

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      .+.-++|.|+|+++|.+||+. |||+.-..+...  . ...++-.+                   ...+-|..+.-    
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde--~-a~~mi~~~-------------------ni~vMLL~~~~----   55 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDE--D-AACMIISD-------------------NIFVMLLEEAR----   55 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCcccc--c-ceeEEEec-------------------cEEEEEeccHH----
Confidence            455689999999999999965 999986544321  1 12222211                   23333432110    


Q ss_pred             CCCccCCCCC---CCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCC-CCcceEEE
Q 027489          167 PDFKGYHNGN---SEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG-GKAGSIHC  220 (222)
Q Consensus       167 ~~~~~y~~gn---~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~d-G~m~~laF  220 (222)
                        |..+.++.   .....---||+.+.   +||+++++..+.|.+..++|.+ |.|.+..|
T Consensus        56 --fq~F~~~~i~dt~~s~evli~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~f  114 (133)
T COG3607          56 --FQTFTKRQIADTTKSREVLISLSAGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSF  114 (133)
T ss_pred             --hhhhcccccccccCCceEEEEeccCcHHHHHHHHHHHHHcCCCCCCCccccccccceee
Confidence              00011100   00011235788875   4999999999999999888876 78887766

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.31  E-value=0.00048  Score=62.51  Aligned_cols=104  Identities=13%  Similarity=0.222  Sum_probs=65.1

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC--CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~--~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      -+-.+++||.+.|.|-+.+..||+..|||+.....+...  ..+..+-+..                   ++...-+...
T Consensus        13 g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~-------------------g~~vFv~~s~   73 (381)
T KOG0638|consen   13 GKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQ-------------------GKIVFVFNSA   73 (381)
T ss_pred             cceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhc-------------------CCEEEEEecC
Confidence            346799999999999999999999999999765322111  1111000111                   1122222221


Q ss_pred             CCCCCCCCCccCCCCC---CCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          161 WGTESDPDFKGYHNGN---SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn---~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .++.. +.   |  |+   ....|.-.+||.|+|.+++...+.++|+.+..+|.
T Consensus        74 ~~p~~-~~---~--G~~l~~HgdgvkdvafeVeD~da~~~~~va~Ga~v~~~p~  121 (381)
T KOG0638|consen   74 YNPDN-SE---Y--GDHLVKHGDGVKDVAFEVEDADAIFQEAVANGAKVVRPPW  121 (381)
T ss_pred             CCCCc-hh---h--hhhhhhcccchhceEEEecchHHHHHHHHHcCCcccCCcc
Confidence            11111 00   1  10   01135678999999999999999999999998883

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.22  E-value=0.00019  Score=65.06  Aligned_cols=114  Identities=18%  Similarity=0.279  Sum_probs=75.5

Q ss_pred             ccCCCceEEEEEEEEeC--CHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEE
Q 027489           80 DEATNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (222)
Q Consensus        80 ~~~t~~~~l~Hv~L~V~--DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL  157 (222)
                      -|.....+++|+...++  .++.+.+||.++|||...+..+.+.  ...-|-+            .+...+-+...+|.+
T Consensus       171 l~~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~--v~te~Sa------------Lrs~vlan~~esi~m  236 (381)
T KOG0638|consen  171 LPKGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQ--VHTEYSA------------LRSIVLANYEESIKM  236 (381)
T ss_pred             CCccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcch--hhhHHHH------------HHHHHHhcCCccEEE
Confidence            45567889999999999  5889999999999999887655322  1000000            011111122345556


Q ss_pred             eecCCCCCC------CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          158 THNWGTESD------PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       158 ~~~~g~e~d------~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .-|.+....      ..+..|+.|    .|.+||++.++||-.+.+.++++|++|...|.
T Consensus       237 pinEp~~G~k~ksQIqeyv~y~gG----~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps  292 (381)
T KOG0638|consen  237 PINEPAPGKKKKSQIQEYVEYHGG----AGVQHIALNTEDIIEAIRGLRARGGEFLSPPS  292 (381)
T ss_pred             eccCCCCCCccHHHHHHHHHhcCC----CceeeeeecchHHHHHHHHHHhcCCccccCCH
Confidence            544332211      111125555    49999999999999999999999999998874

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=97.03  E-value=0.005  Score=57.84  Aligned_cols=105  Identities=18%  Similarity=0.234  Sum_probs=64.1

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCC--cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC--
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT--  163 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~--~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~--  163 (222)
                      ++||-+.|.|.+++..||+..|||+.........+  ....+-+.-+                   ...+-|+.....  
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g-------------------~i~fv~~~~~~~~~   61 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSG-------------------DLVFLFTAPYSPKI   61 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeC-------------------CEEEEEeCCCCCcc
Confidence            58999999999999999999999998764332111  1111222221                   233334332111  


Q ss_pred             CC--CCCCcc-CCCC----------CCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          164 ES--DPDFKG-YHNG----------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       164 e~--d~~~~~-y~~g----------n~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      +.  +....+ .+..          ...+.|..-+||.|+|++++++++.++|+..+.+|.
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~  122 (398)
T PLN02875         62 GAGDDDPASTAPHPSFSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPT  122 (398)
T ss_pred             ccccccccccccccccCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCc
Confidence            00  000000 0000          011247889999999999999999999999988775

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=97.01  E-value=0.0052  Score=54.61  Aligned_cols=88  Identities=20%  Similarity=0.409  Sum_probs=57.9

Q ss_pred             CCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      ...+..|.||-|.|.|++++..||+++|||+...+  .+.    -.|+..++-                 +..|.+ ..|
T Consensus       163 ~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~--~~~----A~F~a~G~Y-----------------HHHia~-N~W  218 (265)
T COG2514         163 LPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTAR--GPS----ALFLASGDY-----------------HHHLAA-NTW  218 (265)
T ss_pred             CCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeec--CCc----ceEEecCCc-----------------ceeEEE-ecc
Confidence            44588999999999999999999999999999876  232    247776641                 344433 345


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHH
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERF  199 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL  199 (222)
                      .....      ..++....|+..+.+.+++   ++....++
T Consensus       219 ~s~~~------~~~~~~~~GLa~~~i~~~~~~~l~~~~~~~  253 (265)
T COG2514         219 NSRGA------RPRNANASGLAWLEIHTPDPEKLDATGTRL  253 (265)
T ss_pred             ccCCC------CCCCCCCCCcceEEEEcCCcccccccccce
Confidence            44321      1111122578888888887   44444444

>PRK10148 hypothetical protein; Provisional

Probab=96.65  E-value=0.074  Score=43.02  Aligned_cols=28  Identities=18%  Similarity=0.457  Sum_probs=22.7

Q ss_pred             EEEEeC-CHHHHHHHHHhccCcEEEEEec
Q 027489           91 TMFRIK-DPKVSLDFYSRVLGMSLLKRLD  118 (222)
Q Consensus        91 v~L~V~-DlekSi~FY~~vLGf~l~~~~~  118 (222)
                      .-|... |.+++++||+++||.++.....
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~   33 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKIS   33 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEE
Confidence            346665 8999999999999999876653

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=96.22  E-value=0.026  Score=52.14  Aligned_cols=90  Identities=19%  Similarity=0.341  Sum_probs=57.1

Q ss_pred             CCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      .+-.-+.-|++|.|+|+++|.+||+.+||+.. +.    ++. . .-+  ++                   ..+-+....
T Consensus       242 ~~~~~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs----de~-a-~cm--~d-------------------tI~vMllt~  293 (357)
T PRK01037        242 EVFSPKTFSVVLEVQDLRRAKKFYSKMFGLEC-WD----GDK-L-FLL--GK-------------------TSLYLQQTK  293 (357)
T ss_pred             hccCCceEEEEeeeCCHHHHHHHHHHHhCCCC-CC----CCc-c-ccc--cC-------------------cEEEEEecC
Confidence            34455778999999999999999999988874 22    211 1 112  11                   122222211


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCC
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .   |+     ...     .-.-+|+.+++   ||+++++..++|.....+|+|
T Consensus       294 ~---D~-----~~~-----~evLl~Ls~~Sre~VD~lv~~A~aaGG~~~~~~~D  334 (357)
T PRK01037        294 A---EK-----KNR-----GTTTLSLELECEHDFVRFLRRWEMLGGELGEQADG  334 (357)
T ss_pred             C---CC-----CCc-----ceEEEEeccCCHHHHHHHHHHHHHcCCCCCCCccc
Confidence            1   11     111     22458899975   899999999999977666655

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=96.21  E-value=0.091  Score=41.67  Aligned_cols=38  Identities=29%  Similarity=0.629  Sum_probs=27.6

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEec
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY  131 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~  131 (222)
                      |.+-.|+|+|-+.-++||+++|||+++....      .++++|.
T Consensus         1 f~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~   38 (125)
T PF14506_consen    1 FIIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGD   38 (125)
T ss_dssp             -EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-
T ss_pred             CcCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecC
Confidence            3466899999999999999999999987632      2456665

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=94.47  E-value=0.38  Score=38.97  Aligned_cols=95  Identities=23%  Similarity=0.310  Sum_probs=57.2

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ...++|+-+.|.|.++...++ +.|||+...+..  +-...+ | .-+                   ...+-|..  .+.
T Consensus         7 ~~G~dFvEFa~~~~~~l~~~~-~~lGF~~~a~hr--sk~v~l-~-rQG-------------------~I~~vln~--ep~   60 (139)
T PF14696_consen    7 LDGFDFVEFAVPDAQALAQLF-TALGFQPVARHR--SKDVTL-Y-RQG-------------------DINFVLNS--EPD   60 (139)
T ss_dssp             EEEEEEEEEE-SSTTSCHHHH-CCCCEEEECCEC--CCSEEE-E-EET-------------------TEEEEEEE--EST
T ss_pred             CCCeEEEEEecCCHHHHHHHH-HHhCcceEEecC--CcceEE-E-EeC-------------------CEEEEEeC--CCc
Confidence            457899999999977777777 679999886532  212222 1 211                   23343332  211


Q ss_pred             CC-CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecC
Q 027489          165 SD-PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       165 ~d-~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P  210 (222)
                      +. .++...| |    .+..-++|.|+|.++++++..++|.+.+.+|
T Consensus        61 s~a~~~~~~H-G----~sv~aiafrV~Da~~A~~rA~~~GA~~~~~~  102 (139)
T PF14696_consen   61 SFAAEFAAQH-G----PSVCAIAFRVDDAAAAYERAVALGAEPVQEP  102 (139)
T ss_dssp             SCHHHHHHHH-S----SEEEEEEEEES-HHHHHHHHHHTT--EEEEE
T ss_pred             chHHHHHHhc-C----CEEEEEEEEeCCHHHHHHHHHHcCCcCcccC
Confidence            10 0000011 2    4788999999999999999999999988776

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.65  E-value=0.59  Score=36.05  Aligned_cols=47  Identities=17%  Similarity=0.270  Sum_probs=32.1

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEec
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY  131 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~  131 (222)
                      ..-.++|+++.|.|++++.+-.++ .|.++.........+....|+..
T Consensus        84 ~~~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~D  130 (142)
T cd08353          84 NALGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRG  130 (142)
T ss_pred             CCCCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEEC
Confidence            355788999999999999999976 68887653211112234455554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=89.88  E-value=4.9  Score=31.07  Aligned_cols=17  Identities=35%  Similarity=0.677  Sum_probs=14.3

Q ss_pred             CCHHHHHHHHHhccCcE
Q 027489           96 KDPKVSLDFYSRVLGMS  112 (222)
Q Consensus        96 ~DlekSi~FY~~vLGf~  112 (222)
                      .+.++|++||+++||-.
T Consensus        11 g~a~eA~~fY~~vf~~~   27 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGS   27 (116)
T ss_dssp             S-HHHHHHHHHHHSTTE
T ss_pred             CCHHHHHHHHHHHcCCC
Confidence            68999999999999854

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=88.92  E-value=1.7  Score=36.15  Aligned_cols=47  Identities=15%  Similarity=0.191  Sum_probs=35.4

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcE-EEEEEecC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYE  132 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~-~l~flg~~  132 (222)
                      +....++||++.|+|++++..-.++ +|.+...+..  +|+. .++|+-..
T Consensus       111 ~~prGfgHIci~V~di~sac~~lke-kGV~f~Kk~~--dGk~K~iaF~~dp  158 (170)
T KOG2944|consen  111 KEPRGFGHICIEVDDINSACERLKE-KGVRFKKKLK--DGKMKPIAFLHDP  158 (170)
T ss_pred             CCCCccceEEEEeCCHHHHHHHHHH-hCceeeecCC--CccccceeEEECC
Confidence            3346899999999999999999965 8999766654  4444 46676643

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=87.54  E-value=3.4  Score=31.86  Aligned_cols=57  Identities=9%  Similarity=-0.029  Sum_probs=40.1

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      -.+.|+++.|.|++++.+-.++ .|.++.............+|+...+                  +..|||.+..
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~------------------G~~ie~~~~~  124 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYG------------------DSLHTLVDRK  124 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccC------------------CcEEEEEecC
Confidence            4588999999999999888865 7999876544322334555655433                  5789998643

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=86.93  E-value=0.89  Score=33.95  Aligned_cols=26  Identities=35%  Similarity=0.455  Sum_probs=22.1

Q ss_pred             eEEEEEeCCHHHHHHHHHh-CCCeEEe
Q 027489          183 GHIGITVDDVYKACERFER-LGVEFAK  208 (222)
Q Consensus       183 ~HIaf~VdDVdaa~~rL~~-~GV~~v~  208 (222)
                      +|++|.|+|++++.+.+.+ .|+....
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~   27 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWE   27 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEE
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEE
Confidence            5999999999999999999 8987643

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=86.24  E-value=3.8  Score=30.24  Aligned_cols=47  Identities=19%  Similarity=0.188  Sum_probs=32.6

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEec-CCCCcEEEEEEec
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLD-FPEMKFSLYFLGY  131 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~-~p~~~~~l~flg~  131 (222)
                      ..-.+.|+++.|.|++++.+..++ .|.++..... .+.++...+|+..
T Consensus        69 ~~~g~~h~~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~g~~~~~~d~  116 (128)
T cd07249          69 RGEGLHHIAFEVDDIDAALARLKA-QGVRLLQEGPRIGAGGKRVAFLHP  116 (128)
T ss_pred             CCCceEEEEEEeCCHHHHHHHHHH-CCCeeeccCCCccCCCCEEEEEec
Confidence            356688999999999999998865 6888876543 2223344455553

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PLN02367 lactoylglutathione lyase

Probab=85.97  E-value=3.7  Score=36.05  Aligned_cols=55  Identities=16%  Similarity=0.163  Sum_probs=39.3

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      ..++|+++.|.|++++.+-.++ .|.++........+ ...+|+...+                  +..|||.+.
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~~g~~-~riaFIkDPD------------------Gn~IEL~e~  222 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKKPNDGKM-KGIAFIKDPD------------------GYWIEIFDL  222 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeCCccCCc-eEEEEEECCC------------------CCEEEEEec
Confidence            4799999999999999999955 99998754332221 2345665433                  578999854

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.56  E-value=2.1  Score=31.38  Aligned_cols=29  Identities=28%  Similarity=0.474  Sum_probs=25.3

Q ss_pred             ceeEEEEEeCCHHHHHHHHHh-CCCeEEec
Q 027489          181 GFGHIGITVDDVYKACERFER-LGVEFAKK  209 (222)
Q Consensus       181 G~~HIaf~VdDVdaa~~rL~~-~GV~~v~~  209 (222)
                      +++|+++.|+|++++.+.+++ .|.++...
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~   32 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIRE   32 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeee
Confidence            678999999999999999985 79887644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=85.14  E-value=6.1  Score=29.50  Aligned_cols=29  Identities=7%  Similarity=0.104  Sum_probs=24.1

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEE
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLK  115 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~  115 (222)
                      ..+.|+++.|.|+++..+--.+ .|.++..
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~  102 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEA  102 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeec
Confidence            4578999999999999887755 7998764

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=82.98  E-value=2.1  Score=31.69  Aligned_cols=30  Identities=20%  Similarity=0.395  Sum_probs=26.1

Q ss_pred             ceeEEEEEeCCHHHHHHHHHhCCCeEEecC
Q 027489          181 GFGHIGITVDDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       181 G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P  210 (222)
                      ++.|+++.|.|++++.+.++..|.++....
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~~~   31 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVREEG   31 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEeec
Confidence            678999999999999999998999886543

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=82.26  E-value=12  Score=34.84  Aligned_cols=96  Identities=21%  Similarity=0.246  Sum_probs=59.7

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ...+.++-+.|+|++.+..=|-..|||+...+....  ...++  .                     ...|.|+-|....
T Consensus        20 ~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk--~v~l~--r---------------------QGdinlvvn~~~~   74 (363)
T COG3185          20 TDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSK--AVTLY--R---------------------QGDINLVVNAEPD   74 (363)
T ss_pred             CCceeEEEEecCCHHHHHHHHHHHhCcccccccccc--ceeEE--E---------------------eCCEEEEEcCCCc
Confidence            556778889999997666666688999987653321  12221  1                     1234444443322


Q ss_pred             C-CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecC
Q 027489          165 S-DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       165 ~-d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P  210 (222)
                      + ..++  +.   ..+.+..-++|.|+|...+.+|.+++|.+....+
T Consensus        75 s~a~~f--~~---~Hgps~~a~a~~V~DA~~A~a~A~a~gA~~~~~~  116 (363)
T COG3185          75 SFAAEF--LD---KHGPSACAMAFRVDDAEQALARALALGARTIDTE  116 (363)
T ss_pred             chhhHH--HH---hcCCchheeEEeeCCHHHHHHHHHHcCCccccCC
Confidence            1 0111  10   1124677899999999999999999999544433

>PRK10291 glyoxalase I; Provisional

Probab=81.05  E-value=8  Score=29.23  Aligned_cols=55  Identities=11%  Similarity=0.076  Sum_probs=36.6

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEe-cCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRL-DFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~-~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      -.+.|+++.|.|++++.+-.++ .|.++.... +.+.+....+|+...+                  +..|||..
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPd------------------G~~iel~~  119 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPD------------------GYKIELIE  119 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCC------------------CCEEEEEE
Confidence            3688999999999998888855 788876421 2222323345555332                  57899975

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=80.43  E-value=4.8  Score=29.35  Aligned_cols=31  Identities=26%  Similarity=0.472  Sum_probs=26.7

Q ss_pred             ceeEEEEEeCCHHHHHHHHHh-CCCeEEecCC
Q 027489          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPD  211 (222)
Q Consensus       181 G~~HIaf~VdDVdaa~~rL~~-~GV~~v~~P~  211 (222)
                      +++|+.+.|+|+++..+-+++ .|.++...+.
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~   34 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFGE   34 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeecccc
Confidence            678999999999999999988 7988776553

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=80.23  E-value=9.5  Score=32.02  Aligned_cols=55  Identities=18%  Similarity=0.153  Sum_probs=37.7

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      -.+.|+++.|.|++++.+..++ .|.++...... ......+|+...+                  +..|||...
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~p~~-~~~~~~~fi~DPd------------------G~~IEl~e~  174 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKKPDD-GKMKGLAFIKDPD------------------GYWIEIFDL  174 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeCCcc-CCceeEEEEECCC------------------CCEEEEEEC
Confidence            3689999999999999999865 89988753221 1122345554332                  578998753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	222
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		3e-51
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		5e-48
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		5e-48
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		1e-47
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		5e-14
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		1e-08

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score =  197 bits (502), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 90/135 (66%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPK 83
Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 84  DKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142
Query: 200 ERLGVEFAKKPDGGK 214
           E LGV+F KKPD GK
Sbjct: 143 EELGVKFVKKPDDGK 157

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score =  187 bits (474), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 84/135 (62%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 23  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 82
Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 83  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 141
Query: 200 ERLGVEFAKKPDGGK 214
           E LGV+F KKPD GK
Sbjct: 142 EELGVKFVKKPDDGK 156

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score =  187 bits (474), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 84/135 (62%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 27  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 86
Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 87  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 145
Query: 200 ERLGVEFAKKPDGGK 214
           E LGV+F KKPD GK
Sbjct: 146 EELGVKFVKKPDDGK 160

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score =  186 bits (471), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 83/135 (61%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +Q+TM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 23  DPSTKDFLLQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 82
Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 83  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 141
Query: 200 ERLGVEFAKKPDGGK 214
           E LGV+F KKPD GK
Sbjct: 142 EELGVKFVKKPDDGK 156

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 25/130 (19%)
Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           +  TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY      P         
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY-----GPET------- 50
Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
              + A IELT+NWG +       Y  G +    +GHI ++VD+  +ACE+  + G    
Sbjct: 51  ---EEAVIELTYNWGVDK------YELGTA----YGHIALSVDNAAEACEKIRQNGGNVT 97
Query: 208 KKPDGGKAGS 217
           ++    K G+
Sbjct: 98  REAGPVKGGT 107

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 25/105 (23%)
Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           M  TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+          
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSS---------- 58
Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDV 192
                  +ELT+N+G  S                +GHI I V+DV
Sbjct: 59  -----TVLELTYNYGVTS----------YKHDEAYGHIAIGVEDV 88

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	222
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	2e-59
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	8e-43
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	1e-42
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	8e-30
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	1e-20
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	1e-20
2p25_A	126	Glyoxalase family protein; structural genomics, MC	5e-20
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	2e-16
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	8e-16
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	1e-13
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	5e-12
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-10
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	8e-10
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-08
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-08
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	7e-08
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	1e-07
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-07
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	5e-07
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	8e-07
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	5e-06
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	5e-06
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	1e-05
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	1e-05
3ghj_A	141	Putative integron gene cassette protein; integron	4e-05
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	7e-05
3huh_A	152	Virulence protein STM3117; structural genomics, ny	7e-05
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	8e-05
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-04
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	1e-04
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	3e-04
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	3e-04
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	4e-04
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	5e-04

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  184 bits (467), Expect = 2e-59
 Identities = 93/162 (57%), Positives = 112/162 (69%), Gaps = 4/162 (2%)

Query: 60  MASSEPKE---SPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR 116
           MA  +P     +        +  D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++
Sbjct: 1   MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQK 60

Query: 117 LDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGN 176
           LDFP MKFSLYFL YED    P D  ++T WTF + AT+ELTHNWGTE D     YHNGN
Sbjct: 61  LDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS-YHNGN 119

Query: 177 SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           S+PRGFGHIGI V DVY AC+RFE LGV+F KKPD GK   +
Sbjct: 120 SDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGL 161

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  140 bits (354), Expect = 8e-43
 Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 25/132 (18%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           +  TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY                
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETE----------- 51

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
                A IELT+NWG +                 +GHI ++VD+  +ACE+  + G    
Sbjct: 52  ----EAVIELTYNWGVDK----------YELGTAYGHIALSVDNAAEACEKIRQNGGNVT 97

Query: 208 KKPDGGKAGSIH 219
           ++    K G+  
Sbjct: 98  REAGPVKGGTTV 109

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  140 bits (354), Expect = 1e-42
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 25/129 (19%)

Query: 86  YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 145
             M  TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+        
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSST------- 59

Query: 146 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 205
                    +ELT+N+G  S      Y +       +GHI I V+DV +      +  V 
Sbjct: 60  --------VLELTYNYGVTS------YKHDE----AYGHIAIGVEDVKELVADMRKHDVP 101

Query: 206 FAKKPDGGK 214
              + + G 
Sbjct: 102 IDYEDESGF 110

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  106 bits (267), Expect = 8e-30
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 20/127 (15%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               + D   S +FY   LG  +++    P+       L   D                 
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDI---------------- 52

Query: 151 KPATIELTHNWGTESD-PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 209
               +E+  N  T+S+        +   E  G  H+   V+DV  + +    LG+   + 
Sbjct: 53  ---ELEIFGNKLTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEV 109

Query: 210 PDGGKAG 216
                 G
Sbjct: 110 RYDDYTG 116

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 84.1 bits (208), Expect = 1e-20
 Identities = 26/131 (19%), Positives = 39/131 (29%), Gaps = 24/131 (18%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           +      +   K  L FY   L + LL   D P     + FL   ++             
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES------------- 55

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
                  IEL      ES         G        HI I V  + +  +  +  GV+  
Sbjct: 56  ------KIELLEPLSEESPIAKFIQKRGEG----IHHIAIGVKSIEERIQEVKENGVQMI 105

Query: 208 -KKPDGGKAGS 217
             +P  G  G+
Sbjct: 106 NDEPVPGARGA 116

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 83.2 bits (206), Expect = 1e-20
 Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 23/131 (17%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           +      + D + +  FY  +LG  + + +  PE   S+ F+   +T             
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNT------------- 52

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF- 206
                  +EL H  G +S           ++  G  HI I VD++  A    ++  +   
Sbjct: 53  ------KMELLHPLGLDSPIA---GFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSL 103

Query: 207 AKKPDGGKAGS 217
           +++   G  G 
Sbjct: 104 SEEVKIGAHGK 114

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 80.9 bits (200), Expect = 5e-20
 Identities = 17/127 (13%), Positives = 32/127 (25%), Gaps = 26/127 (20%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                 + + + +FY   LG  +L+    PE       L                     
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ---------------- 52

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
               +E+  +    + P          E  G  H+   V+ + +        G+E     
Sbjct: 53  ---ELEIFISDQFPARPS-------YPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLR 102

Query: 211 DGGKAGS 217
                G 
Sbjct: 103 VDDFTGK 109

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 71.7 bits (176), Expect = 2e-16
 Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 24/120 (20%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
             + +K+   +L  + R+  +   + +     K  + F+                     
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGY---------------- 54

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
               +EL    G +S P  K    G        HI   V+D+ K+ E   ++G    KK 
Sbjct: 55  ---RVELVAPDGEDS-PINKTIKKG----STPYHICYEVEDIQKSIEEMSQIGYTLFKKA 106

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 70.6 bits (173), Expect = 8e-16
 Identities = 19/131 (14%), Positives = 35/131 (26%), Gaps = 37/131 (28%)

Query: 88  MQQTMFRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 145
           + Q + R+   D   +L+FY  +L   +  R + P+    L  +      +   + +   
Sbjct: 5   ILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIAGSEEAL--- 61

Query: 146 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 205
                                           +P         VD + K     E  G E
Sbjct: 62  --------------------------------KPFRNTQATFLVDSLDKFKTFLEENGAE 89

Query: 206 FAKKPDGGKAG 216
             + P     G
Sbjct: 90  IIRGPSKVPTG 100

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 64.6 bits (157), Expect = 1e-13
 Identities = 23/135 (17%), Positives = 38/135 (28%), Gaps = 29/135 (21%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                 + +    FY    G +     +     F+ YFL +ED                 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG---------------- 50

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFA 207
             A +E+                    E  G+ HI I+    + V +  E+  + G   A
Sbjct: 51  --ARLEIMSRTDVTGKT--------TGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIA 100

Query: 208 KKPDGGKAGSIHCSV 222
            +P     G     V
Sbjct: 101 GEPRMTGDGYYESVV 115

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 60.6 bits (147), Expect = 5e-12
 Identities = 15/122 (12%), Positives = 28/122 (22%), Gaps = 19/122 (15%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               ++D + S  FY  +LG+  L   + P     L                    +   
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTEL------------VASGKVANFITP 70

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY--KACERFERLGVEFAK 208
               ++L                          H+   +D     +A        +  A 
Sbjct: 71  DGTILDLFGEPELSPPDPNPEK-----TFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAH 125

Query: 209 KP 210
            P
Sbjct: 126 GP 127

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 55.5 bits (133), Expect = 5e-10
 Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 22/129 (17%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
            T   + D   +  FY+  LG  +   +     ++           +             
Sbjct: 29  LTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQ------------ 76

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 209
                + L  +      P  +          G       VDD+    ER   LGV F ++
Sbjct: 77  -----LLLEPSSHAAVTPFKEALVAD-----GIPAASFAVDDIAAEYERLSALGVRFTQE 126

Query: 210 PDGGKAGSI 218
           P        
Sbjct: 127 PTDMGPVVT 135

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 54.5 bits (131), Expect = 8e-10
 Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 10/120 (8%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               ++    ++ F+   +G++L  R +  E +++    G        A      + T  
Sbjct: 15  VSIVVESLDNAISFFEE-IGLNLEGRANV-EGEWAGRVTGLGSQCVEIA-----MMVTPD 67

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
             + IEL+      +  D +          G+  +  TV+D+ +   R  + G E   + 
Sbjct: 68  GHSRIELSRFLTPPTIADHR---TAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEV 124

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 49.6 bits (118), Expect = 4e-08
 Identities = 18/119 (15%), Positives = 27/119 (22%), Gaps = 26/119 (21%)

Query: 92  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 151
                D  VS  F+  VLG  +    + P+ +F    L   D                  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVM-------------LEG 54

Query: 152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
            A        G    P   G            +    V D+    +R      +     
Sbjct: 55  IAGKSRKWLSGDLEFPLGSGV-----------NFQWDVIDIEPLYQRVNESAADSIYLA 102

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 48.9 bits (117), Expect = 7e-08
 Identities = 16/126 (12%), Positives = 28/126 (22%), Gaps = 30/126 (23%)

Query: 96  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 155
           +D  +S  +Y+ +L    L R       F                               
Sbjct: 14  RDLDISCRWYTEILDWKELVRGRGDTTSF--AHGVLPGG-------------------LS 52

Query: 156 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG 212
            +           F           G  H+  +V    D+    ER  + G  F    + 
Sbjct: 53  IVLREHDGGGTDLFDETR------PGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQEL 106

Query: 213 GKAGSI 218
                +
Sbjct: 107 PFGWIL 112

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 49.1 bits (117), Expect = 7e-08
 Identities = 11/115 (9%), Positives = 24/115 (20%), Gaps = 31/115 (26%)

Query: 94  RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA 153
                   + FY   L +  +         +     G                       
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA-----------------DY 59

Query: 154 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVE 205
            +E T   G  + P           P     +   V +   +     + + +G +
Sbjct: 60  HLEFTQYEGGSTAPV----------PHPDSLLVFYVPNAVELAAITSKLKHMGYQ 104

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 49.0 bits (117), Expect = 1e-07
 Identities = 19/124 (15%), Positives = 32/124 (25%), Gaps = 29/124 (23%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
           T     D   +  FY  V G+ ++ +                         +   +  F 
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLK-------------------------LPGQLVFFK 46

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFA 207
               + L  +    S  D       +    G GH     D   +V +   RFE L +   
Sbjct: 47  CGRQMLLLFDPQESSRADANNPIPRH-GAVGQGHFCFYADDKAEVDEWKTRFEALEIPVE 105

Query: 208 KKPD 211
               
Sbjct: 106 HYHR 109

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 47.5 bits (113), Expect = 2e-07
 Identities = 12/131 (9%), Positives = 29/131 (22%), Gaps = 34/131 (25%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
           Q    +   + +  FY   +GM  + + +  + +   +F           +         
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQ-------- 66

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 209
                                     N  P    H    V  + +  +   + G+E    
Sbjct: 67  --------------------------NFNPAKRAHPAFYVLKIDEFKQELIKQGIEVIDD 100

Query: 210 PDGGKAGSIHC 220
                    + 
Sbjct: 101 HARPDVIRFYV 111

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 47.0 bits (111), Expect = 5e-07
 Identities = 18/130 (13%), Positives = 33/130 (25%), Gaps = 16/130 (12%)

Query: 89  QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 148
               +   D   +  +Y    G   L R + PE       +      +            
Sbjct: 11  DHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHM--------- 61

Query: 149 FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF-A 207
                 +++      ES        +         H+   VDD+          GV+   
Sbjct: 62  ----TQVQVMAPLNDESTVAKWLAKHNGRAG--LHHMAWRVDDIDAVSATLRERGVQLLY 115

Query: 208 KKPDGGKAGS 217
            +P  G  G+
Sbjct: 116 DEPKLGTGGN 125

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 46.4 bits (110), Expect = 8e-07
 Identities = 23/142 (16%), Positives = 45/142 (31%), Gaps = 21/142 (14%)

Query: 86  YFMQQTMFRIK----------DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTA 135
           + M + +  ++          D + SL  Y+   G+   +     +   +          
Sbjct: 8   HSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGR--- 64

Query: 136 SAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA 195
             P     +  +    P  +EL       S   ++ + + N E  G  HI   V D+ + 
Sbjct: 65  --PTKARAKLAFFELGPLQLELIEPDENPST--WREFLDKNGE--GIHHIAFVVKDMDRK 118

Query: 196 CERFERLGVEFAKKPDGGKAGS 217
            E   R G++      G   G 
Sbjct: 119 VEELYRKGMKVI--QKGDFEGG 138

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 45.0 bits (106), Expect = 5e-06
 Identities = 23/180 (12%), Positives = 36/180 (20%), Gaps = 44/180 (24%)

Query: 75  LHTARDEATNGYFMQQTM------FRIKDPKVSLDFYSRVLGMSLLKR------------ 116
            H       N YF               +    L FY+ +LG   +              
Sbjct: 8   HHHHHSSGENLYFQGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQADAFTIQLGVS 67

Query: 117 -LDF---PEMKFSLYFLGY----EDTASAPADPVDRTVWTFGKPATIELTHNWGTES--- 165
            + F    +     Y +             A                     +   S   
Sbjct: 68  QIQFRAAADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYV 127

Query: 166 -DPD-----FKGYHN---------GNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
            DP                        +    G I IT  DV +A  R ++  +      
Sbjct: 128 EDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQ 187

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 43.7 bits (103), Expect = 5e-06
 Identities = 16/123 (13%), Positives = 31/123 (25%), Gaps = 29/123 (23%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
               +  ++D   S  FY   LG+ +L+        F L+  G+                
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SFVLFETGF---------------A 49

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
                +  E      +++   +               +     DV  A +      VE  
Sbjct: 50  IHEGRSLEETIWRTSSDAQEAYGR---------RNMLLYFEHADVDAAFQDIAP-HVELI 99

Query: 208 KKP 210
              
Sbjct: 100 HPL 102

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 42.5 bits (100), Expect = 1e-05
 Identities = 20/128 (15%), Positives = 40/128 (31%), Gaps = 36/128 (28%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               + D + S+ F+  +LG++L  R +        Y    +                  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT-----GAYLTCGDLW---------------- 46

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAK 208
               + L+++   +  P          +   + H   TV  +D     +R E+ GV   K
Sbjct: 47  ----VCLSYDEARQYVP---------PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWK 93

Query: 209 KPDGGKAG 216
           +     A 
Sbjct: 94  QNKSEGAS 101

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 17/131 (12%), Positives = 43/131 (32%), Gaps = 27/131 (20%)

Query: 82  ATNGYFMQQT--MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           +  GY +++   ++  KD   ++ ++  +LG             +S   +  +D      
Sbjct: 14  SERGYVVRENGPVYFTKDMDKTVKWFEEILG-------------WSGDIVARDDEGFG-- 58

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
                    F  P+ + + H         F+G+H    EP       + ++ +    +  
Sbjct: 59  ----DYGCVFDYPSEVAVAHL------TPFRGFHLFKGEPIKGVAGFMMIEGIDALHKYV 108

Query: 200 ERLGVEFAKKP 210
           +  G +     
Sbjct: 109 KENGWDQISDI 119

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 15/132 (11%), Positives = 38/132 (28%), Gaps = 41/132 (31%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
              ++K+ + S  FY+ +LG            +++  ++                    G
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS-------------------G 70

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEF-- 206
           +   + L      + + +               H    V+  ++    +  E  GV    
Sbjct: 71  RAGMVVL------QEEKENWQQQ----------HFSFRVEKSEIEPLKKALESKGVSVHG 114

Query: 207 AKKPDGGKAGSI 218
               +  +A S+
Sbjct: 115 PVNQEWMQAVSL 126

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 25/134 (18%), Positives = 42/134 (31%), Gaps = 36/134 (26%)

Query: 92  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 151
           +  +K  K +  FYS++LGM   + + F E + +L F                       
Sbjct: 32  VMTVKSIKDTTMFYSKILGM---EVMTFKEDRKALCFGDQ-------------------- 68

Query: 152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 210
                L H  G E +P        +  P       IT   + +  +  +   V   + P 
Sbjct: 69  --KFNL-HEVGKEFEP-----KAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPV 120

Query: 211 ----DGGKAGSIHC 220
                 G   SI+ 
Sbjct: 121 PRTGAKGPIMSIYF 134

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 31/118 (26%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 152
             + D   ++ FY  VLG S +    F + + +L F                        
Sbjct: 29  LTVSDISTTIRFYEEVLGFSAVT---FKQNRKALIFGAQ--------------------- 64

Query: 153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
             I L H    E +P           P       IT   +        + G+   + P
Sbjct: 65  -KINL-HQQEMEFEP-----KASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGP 115

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 39.7 bits (93), Expect = 8e-05
 Identities = 15/126 (11%), Positives = 27/126 (21%), Gaps = 40/126 (31%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               + D   + +F  +  G++                              +       
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRG------------------------NAFAVMRD 42

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFA 207
                 LT   G E              P+ F H+G   +    V K  +R +  G    
Sbjct: 43  -NDGFILTLMKGKEVQY-----------PKTF-HVGFPQESEEQVDKINQRLKEDGFLVE 89

Query: 208 KKPDGG 213
                 
Sbjct: 90  PPKHAH 95

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 39.5 bits (92), Expect = 1e-04
 Identities = 22/118 (18%), Positives = 34/118 (28%), Gaps = 31/118 (26%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 152
             + D   + +FY +VLGM     + F   + +L F   +                    
Sbjct: 16  LTVADIPTTTNFYEKVLGMKA---VSFGAGRIALEFGHQKIN------------------ 54

Query: 153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
                 H  G E +P        N          IT   +  A +  E  GV   + P
Sbjct: 55  -----LHQLGNEFEP-----KAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGP 102

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 17/130 (13%), Positives = 28/130 (21%), Gaps = 35/130 (26%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           +          +  L FY R++G        F   K      G E   +           
Sbjct: 7   ITSITINTSHLQGMLGFY-RIIG------FQFTASKVDK---GSEVHRAVHNG------- 49

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL-GVEF 206
                    L                N          +G  + D+ K  +   ++ G   
Sbjct: 50  -----VEFSLY------------SIQNPQRSQIPSLQLGFQITDLEKTVQELVKIPGAMC 92

Query: 207 AKKPDGGKAG 216
              P     G
Sbjct: 93  ILDPTDMPDG 102

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 27/136 (19%), Positives = 41/136 (30%), Gaps = 36/136 (26%)

Query: 84  NGYFMQQTMFRIK----------DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED 133
           N YF    M+ IK          +   +  FY  VLG+  +K     +     Y L Y D
Sbjct: 17  NLYFQSNAMYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSM-YHLFYGD 75

Query: 134 TASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD-- 191
              +P      T  +F                  +                IG+ V    
Sbjct: 76  KTGSPG-----TELSFF-----------------EIPLVGRTYRGTNAITRIGLLVPSED 113

Query: 192 -VYKACERFERLGVEF 206
            ++   ERFE+  V+ 
Sbjct: 114 SLHYWKERFEKFDVKH 129

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 16/120 (13%), Positives = 27/120 (22%), Gaps = 28/120 (23%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                 DP  ++D+  RV G  LL R            L                     
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTGG----------------- 47

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
               + +       +     G             + + V DV +   R    G +  +  
Sbjct: 48  --GIVMVRRTGEPYTVSCAGG--------HTCKQVIVWVSDVDEHFMRSTAAGADIVQPL 97

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 37.9 bits (88), Expect = 5e-04
 Identities = 6/43 (13%), Positives = 12/43 (27%), Gaps = 2/43 (4%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED 133
             F ++D +        V     +        +FSL    +  
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYA--SDTEQFSLSREKFFL 48

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	222
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.89
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.83
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.67
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.63
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.63
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.63
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.61
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.61
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.6
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.6
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.58
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.57
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.54
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.54
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.53
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.52
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.48
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.46
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.44
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.42
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.41
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.39
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.37
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.37
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.36
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.36
3ghj_A	141	Putative integron gene cassette protein; integron	99.35
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.35
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.34
2i7r_A	118	Conserved domain protein; structural genomics cons	99.34
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.33
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.31
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.3
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.3
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.3
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.29
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.28
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.28
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.27
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.27
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.26
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.25
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.25
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.25
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.23
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.22
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.22
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.2
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.2
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.19
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.19
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.18
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.18
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.17
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.16
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.15
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.15
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.14
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.14
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.13
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.13
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.12
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.1
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.1
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.1
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.09
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.08
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.08
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.08
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.07
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.07
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.07
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.06
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.05
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.05
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.04
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.04
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.04
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.03
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.02
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.02
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.0
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.95
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	98.95
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	98.94
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	98.92
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	98.91
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	98.9
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	98.88
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	98.88
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	98.87
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	98.82
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	98.82
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	98.72
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	98.67
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	98.65
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.65
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	98.65
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.18
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	98.18
1tsj_A	139	Conserved hypothetical protein; structural genomic	98.11
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.44
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	96.92
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	96.9
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	95.25
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	91.4
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	88.9
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	88.7
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	86.7
3ghj_A	141	Putative integron gene cassette protein; integron	85.97
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	84.29
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	84.17
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	83.17
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	83.13
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	81.91
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	81.51

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.89  E-value=7.7e-23  Score=165.81  Aligned_cols=154  Identities=55%  Similarity=0.988  Sum_probs=123.6

Q ss_pred             CCCCCCCCCCCCCccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccce
Q 027489           67 ESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTV  146 (222)
Q Consensus        67 ~~~~~~~~~~~~~~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~  146 (222)
                      .+++.+++++..|+|.+..++++|++|.|+|++++++||+++|||++..+.+.+++.+.++|++.++...+|.|...+..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   93 (187)
T 3vw9_A           14 LTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA   93 (187)
T ss_dssp             CCHHHHHHTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHH
T ss_pred             cchhHHHhhccCCCCccceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhh
Confidence            45667788889999999999999999999999999999999999999988777777788999988764434444445677


Q ss_pred             eecCCCcEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEEEe
Q 027489          147 WTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCS  221 (222)
Q Consensus       147 w~~~~~~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~laFi  221 (222)
                      |.+.+...|||++.++.+..+.. .+..++..+.|++|++|.|+|+++++++|+++|++++.+|.++....++|+
T Consensus        94 ~~~~~~~~l~l~~~~~~~~~~~~-~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~  167 (187)
T 3vw9_A           94 WALSRKATLELTHNWGTEDDETQ-SYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFI  167 (187)
T ss_dssp             HHTTCSSEEEEEEETTGGGCTTC-CCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEE
T ss_pred             hcccCCceEEEEEecCCCCCCcc-ccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEE
Confidence            88888889999877654322211 244555445689999999999999999999999999999988776665554

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.83  E-value=2.7e-20  Score=150.93  Aligned_cols=154  Identities=58%  Similarity=1.036  Sum_probs=110.7

Q ss_pred             CCCCCCCCCCCCCCccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccc
Q 027489           66 KESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT  145 (222)
Q Consensus        66 ~~~~~~~~~~~~~~~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~  145 (222)
                      +.+.+...++|..+++.+..++++|+.|.|+|++++++||+++|||++....+.++..+.+++++.++...+|.+...+.
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   89 (184)
T 2za0_A           10 GLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKT   89 (184)
T ss_dssp             CCCHHHHHHTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHH
T ss_pred             CcchhhhhcccCCcCCCccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchhe
Confidence            44556677889999999999999999999999999999999999999987655444457777887653212233222334


Q ss_pred             eeecCCCcEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          146 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       146 ~w~~~~~~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                      .|.+..+..|+|++.++.+..+.. .+..++..+.|+.|++|.|+|+++++++|+++|+++..+|.++.....+|
T Consensus        90 ~~~~~~~~~l~L~~~~~~~~~~~~-~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~  163 (184)
T 2za0_A           90 AWTFSRKATLELTHNWGTEDDETQ-SYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAF  163 (184)
T ss_dssp             HHHTTSSSEEEEEEETTGGGCTTC-CCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEE
T ss_pred             eeecCCCceEEEEecCCCCCCccc-ccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEE
Confidence            565555688999876442211111 13333222357899999999999999999999999999998765544444

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.67  E-value=2.4e-15  Score=113.85  Aligned_cols=102  Identities=40%  Similarity=0.768  Sum_probs=78.7

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      ++++|+.|.|+|++++++||+++|||++....+.+++.+.+++++.++..               .+..|+|...++...
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~~   65 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK   65 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCC---------------CCcEEEEEEcCCCCc
Confidence            57999999999999999999999999998776555556667777765311               146788876543221


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                            +..+    .++.|++|.|+|+++++++|+++|+++..+|.+
T Consensus        66 ------~~~~----~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~  102 (135)
T 1f9z_A           66 ------YELG----TAYGHIALSVDNAAEACEKIRQNGGNVTREAGP  102 (135)
T ss_dssp             ------CCCC----SSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEE
T ss_pred             ------ccCC----CCccEEEEEeCCHHHHHHHHHHCCCEEecCCcc
Confidence                  2122    377899999999999999999999999877643

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.63  E-value=1.5e-15  Score=113.90  Aligned_cols=102  Identities=22%  Similarity=0.350  Sum_probs=77.5

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      +++++|+.|.|+|++++++||+++|||++......++.++..+|+..++                  +..|+|....+..
T Consensus         1 gm~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~------------------~~~l~l~~~~~~~   62 (127)
T 3e5d_A            1 GMKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED------------------GARLEIMSRTDVT   62 (127)
T ss_dssp             -CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS------------------SCEEEEEEETTCC
T ss_pred             CCEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC------------------CcEEEEEecCCCC
Confidence            4789999999999999999999999999987654444456667777543                  4678887654322


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ..+    ..    ...|+.|++|.|+|   +++++++++++|+++..+|.+
T Consensus        63 ~~~----~~----~~~g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~  105 (127)
T 3e5d_A           63 GKT----TG----ENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM  105 (127)
T ss_dssp             CCC----CS----SCSSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CCC----Cc----CCCceEEEEEEcCCHHHHHHHHHHHHHcCCeEecCccc
Confidence            111    11    12478999999999   889999999999999887754

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.63  E-value=9.9e-15  Score=109.33  Aligned_cols=108  Identities=19%  Similarity=0.179  Sum_probs=76.6

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|++|.|+|++++++||+++|||++..+...++.....+++..+                   +..|+|..+.+.+
T Consensus         3 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~   63 (134)
T 3l7t_A            3 LKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-------------------DIELEIFGNKLTD   63 (134)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET-------------------TEEEEEEECCTTS
T ss_pred             eeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC-------------------CeEEEEEeccccc
Confidence            468999999999999999999999999998776555444444555543                   3578888743221


Q ss_pred             CC-CCCccCCCCCC-CCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          165 SD-PDFKGYHNGNS-EPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~d-~~~~~y~~gn~-~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .. +.. +...... ...|..|++|.|+|+++++++|+++|+++...|.+
T Consensus        64 ~~~~~~-~~~~~~~~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~  112 (134)
T 3l7t_A           64 SNYCAP-PERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYD  112 (134)
T ss_dssp             TTCCCC-CCCCCSSSCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEEC
T ss_pred             ccccCC-ccccCCCCCCCCeEEEEEEECCHHHHHHHHHhCCCcccceecc
Confidence            10 000 0000000 12588899999999999999999999999876654

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.63  E-value=3.8e-15  Score=111.65  Aligned_cols=116  Identities=22%  Similarity=0.347  Sum_probs=80.5

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..+++|++|.|+|++++++||+++|||++..+...++.+...+++..+                   +..++|+...+.
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~   62 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG-------------------NTKMELLHPLGL   62 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS-------------------SSEEEEEEECST
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC-------------------CEEEEEEecCCC
Confidence            4678999999999999999999999999988665444444556666654                   357888765433


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecC-CCCC-cceEEEe
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGGK-AGSIHCS  221 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P-~dG~-m~~laFi  221 (222)
                      .. +. ..+...+ ...|+.|++|.|+|+++++++|+++|+++..+| ..+. ...++|+
T Consensus        63 ~~-~~-~~~~~~~-~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~  119 (134)
T 3rmu_A           63 DS-PI-AGFLQKN-KAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFL  119 (134)
T ss_dssp             TC-TT-HHHHHHC-TTCEEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEE
T ss_pred             Cc-hh-hhhhhcc-CCCCceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEE
Confidence            21 10 0000000 124789999999999999999999999987664 3232 2345554

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.61  E-value=4.8e-16  Score=122.83  Aligned_cols=116  Identities=16%  Similarity=0.193  Sum_probs=75.5

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ..|+|+|+.|.|+|+++|++||+++|||++..+...++  +.+..+...+..               ....+.+......
T Consensus        23 ~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~---------------~~~~l~~~~~~~~   85 (155)
T 4g6x_A           23 NAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAP---------------DGTQLLLEPSSHA   85 (155)
T ss_dssp             CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCT---------------TSCEEEEEECCST
T ss_pred             CceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCC---------------cceEEEeccCCCc
Confidence            46799999999999999999999999999987655443  344444433211               0222222211111


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEEEe
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCS  221 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~laFi  221 (222)
                      ..    .+...+. ...|..|++|.|+|+++++++|+++|+++..+|.+......+|+
T Consensus        86 ~~----~~~~~~~-~~~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f  138 (155)
T 4g6x_A           86 AV----TPFKEAL-VADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAIL  138 (155)
T ss_dssp             TH----HHHHHHH-HHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEE
T ss_pred             cc----ccccccc-ccCCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEE
Confidence            10    0000000 01367899999999999999999999999998876554444443

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.61  E-value=2e-15  Score=118.94  Aligned_cols=119  Identities=21%  Similarity=0.283  Sum_probs=81.5

Q ss_pred             CCCccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC--------------CcEEEEEEecCCCCCCCCCCc
Q 027489           77 TARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------------MKFSLYFLGYEDTASAPADPV  142 (222)
Q Consensus        77 ~~~~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~--------------~~~~l~flg~~~~~~~p~d~~  142 (222)
                      +.+.+.+...+++|++|.|+|++++++||+++|||++......++              ....++|+..           
T Consensus         9 ~~~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------   77 (159)
T 3gm5_A            9 SMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-----------   77 (159)
T ss_dssp             CCCSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-----------
T ss_pred             cccccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-----------
Confidence            345566778899999999999999999999999999765443321              2233344433           


Q ss_pred             ccceeecCCCcEEEEeecCCCCCCCCCccC--CCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          143 DRTVWTFGKPATIELTHNWGTESDPDFKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       143 ~~~~w~~~~~~~IEL~~~~g~e~d~~~~~y--~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                              ++..|||+...+... + ...+  ..+    .|++||||.|+|+++++++|+++|++++.++..+- ..++|
T Consensus        78 --------g~~~leL~~~~~~~~-~-~~~~l~~~~----~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g-~~~~~  142 (159)
T 3gm5_A           78 --------GPLQLELIEPDENPS-T-WREFLDKNG----EGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEG-GRYAY  142 (159)
T ss_dssp             --------TTEEEEEEEECSSSC-H-HHHHHHHHC----SEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETT-EEEEE
T ss_pred             --------CCEEEEEEEECCCCC-h-hHHHhhcCC----ceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCC-eeEEE
Confidence                    256899986532211 0 0000  012    48899999999999999999999999987653322 34454


Q ss_pred             e
Q 027489          221 S  221 (222)
Q Consensus       221 i  221 (222)
                      +
T Consensus       143 ~  143 (159)
T 3gm5_A          143 I  143 (159)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.60  E-value=4.8e-15  Score=117.73  Aligned_cols=113  Identities=24%  Similarity=0.378  Sum_probs=82.3

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..+++|++|.|+|++++++||+++|||++....+.++.+..++++..+                   +..|+|+...+.
T Consensus         5 ~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~l~~~~~~   65 (161)
T 3oa4_A            5 KSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG-------------------ESKIELLEPLSE   65 (161)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET-------------------TEEEEEEEESST
T ss_pred             ccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC-------------------CeEEEEEeECCC
Confidence            3578999999999999999999999999998765544445566676653                   357888865332


Q ss_pred             CCCCCCccC--CCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEec-CCCCC-cceEEEe
Q 027489          164 ESDPDFKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGK-AGSIHCS  221 (222)
Q Consensus       164 e~d~~~~~y--~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~-P~dG~-m~~laFi  221 (222)
                      .. + ...+  ..+    .|+.|++|.|+|+++++++|+++|++++.+ |..+. ...++|+
T Consensus        66 ~~-~-~~~~~~~~~----~g~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~  121 (161)
T 3oa4_A           66 ES-P-IAKFIQKRG----EGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFL  121 (161)
T ss_dssp             TS-H-HHHHHHHHC----SEEEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEB
T ss_pred             CC-h-HHHHhhcCC----CCeEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEE
Confidence            11 0 0000  112    488999999999999999999999999877 65443 3346665

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.60  E-value=3.9e-14  Score=109.74  Aligned_cols=101  Identities=36%  Similarity=0.627  Sum_probs=76.6

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..+++|+.|.|+|++++++||+++|||++....+.+++.+.++++..++..               .+..|+|....+.
T Consensus         5 ~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~l~l~~~~~~   69 (144)
T 2c21_A            5 PSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEM---------------SSTVLELTYNYGV   69 (144)
T ss_dssp             -CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTT---------------TSCEEEEEEETTC
T ss_pred             ccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCC---------------CceEEEEEecCCC
Confidence            3578999999999999999999999999998765544445666777765310               1367888765432


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEec
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK  209 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~  209 (222)
                      ..      +..+    .++.|++|.|+|+++++++|+++|+++..+
T Consensus        70 ~~------~~~~----~~~~h~~f~v~d~~~~~~~l~~~G~~~~~~  105 (144)
T 2c21_A           70 TS------YKHD----EAYGHIAIGVEDVKELVADMRKHDVPIDYE  105 (144)
T ss_dssp             CC------CCCC----SSEEEEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             CC------CCCC----CCceEEEEEeCCHHHHHHHHHHCCCEEecc
Confidence            11      2111    378899999999999999999999998876

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.58  E-value=2e-14  Score=110.43  Aligned_cols=121  Identities=16%  Similarity=0.267  Sum_probs=81.9

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..+++|+.|.|+|++++++||+++|||++....+.++.++..+++..++..   .          ..+..|+|......
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---~----------~~~~~l~l~~~~~~   72 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKL---T----------EHMTQVQVMAPLND   72 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSC---C----------TTCCEEEEEEESST
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCC---c----------CcceEEEEeecCCC
Confidence            5679999999999999999999999999998765544444556677654310   0          00267888865332


Q ss_pred             CCCCCCccC--CCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEE-ecCCCCC-cceEEEe
Q 027489          164 ESDPDFKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-KKPDGGK-AGSIHCS  221 (222)
Q Consensus       164 e~d~~~~~y--~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v-~~P~dG~-m~~laFi  221 (222)
                      .. + ...+  ..+  ...|+.|++|.|+|+++++++|+++|++++ ..|.++. ...++|+
T Consensus        73 ~~-~-~~~~~~~~~--~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~  130 (148)
T 1jc4_A           73 ES-T-VAKWLAKHN--GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFM  130 (148)
T ss_dssp             TS-H-HHHHHHHTT--TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEB
T ss_pred             CC-h-HHHHHHhCC--CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEE
Confidence            11 0 0000  011  013788999999999999999999999988 4565432 2355664

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.57  E-value=9.5e-15  Score=110.94  Aligned_cols=103  Identities=19%  Similarity=0.204  Sum_probs=74.4

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEe-cCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRL-DFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~-~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      .|.++++|++|.|+|++++++||+ +|||++..+. ..+..+...+|+..+                   +..|||+...
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~   62 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING-------------------GYRVELVAPD   62 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET-------------------TEEEEEEEES
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC-------------------CEEEEEEecC
Confidence            467899999999999999999999 9999986542 223334455666543                   4678988653


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecC
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P  210 (222)
                      +... + ...+.. +  ..|++|+||.|+|+++++++|+++|++++.+|
T Consensus        63 ~~~~-~-~~~~~~-~--~~g~~hiaf~v~di~~~~~~l~~~G~~~~~~p  106 (133)
T 3hdp_A           63 GEDS-P-INKTIK-K--GSTPYHICYEVEDIQKSIEEMSQIGYTLFKKA  106 (133)
T ss_dssp             STTC-T-HHHHTT-T--SCEEEEEEEEESCHHHHHHHHTTTTEEEEEEE
T ss_pred             CCCC-h-HHHHHh-c--CCceEEEEEEcCCHHHHHHHHHHcCCccccCC
Confidence            3221 0 000100 0  24888999999999999999999999998764

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.54  E-value=2e-13  Score=105.24  Aligned_cols=108  Identities=16%  Similarity=0.233  Sum_probs=74.5

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecC-----------CCCcEEEEEEecCCCCCCCCCCcccceeecCC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF-----------PEMKFSLYFLGYEDTASAPADPVDRTVWTFGK  151 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~-----------p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~  151 (222)
                      .+..+++|+.|.|+|++++++||++ |||++....+.           ++.....+++..+++                 
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g-----------------   68 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG-----------------   68 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS-----------------
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCC-----------------
Confidence            3568999999999999999999999 99999865432           112344556665321                 


Q ss_pred             CcEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       152 ~~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      ...|+|+...+...... .....  ....|+.|++|.|+|+++++++|+++|++++.+|.
T Consensus        69 ~~~l~l~~~~~~~~~~~-~~~~~--~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~  125 (153)
T 1ss4_A           69 HSRIELSRFLTPPTIAD-HRTAP--VNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVV  125 (153)
T ss_dssp             SCEEEEEEEEESCCCCB-CTTCC--SSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCE
T ss_pred             CcEEEEEEecCCCCccc-ccCCC--CCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCc
Confidence            35788875322111000 00000  11247889999999999999999999999987774

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.54  E-value=1.9e-13  Score=102.82  Aligned_cols=104  Identities=19%  Similarity=0.285  Sum_probs=75.2

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      .+..+++|+.|.|+|++++++||+++|||++......+++ ..++.+..++.                 ...|+|.....
T Consensus         9 ~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~-----------------~~~l~l~~~~~   70 (133)
T 4hc5_A            9 LMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPGA-----------------QTQVALGLPSW   70 (133)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTTC-----------------SCEEEEECGGG
T ss_pred             ccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCCC-----------------ceEEEEecCcc
Confidence            3577999999999999999999999999999876543222 33444544321                 35677764321


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK  214 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~  214 (222)
                      ...         . ..+.+..|++|.|+|+++++++|+++|+++..+|.+..
T Consensus        71 ~~~---------~-~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~  112 (133)
T 4hc5_A           71 YED---------G-RKPGGYTGISLITRDIDEAYKTLTERGVTFTKPPEMMP  112 (133)
T ss_dssp             CSS---------C-CCSCEEEEEEEEESCHHHHHHHHHHTTCEESSSCEECT
T ss_pred             ccc---------c-cCCCCeEEEEEEeCCHHHHHHHHHHCCCEeecCCCcCC
Confidence            100         0 01247789999999999999999999999987775533

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.53  E-value=4.5e-14  Score=109.07  Aligned_cols=107  Identities=16%  Similarity=0.131  Sum_probs=74.5

Q ss_pred             cCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC--------CCcEEEEEEecCCCCCCCCCCcccceeecCCC
Q 027489           81 EATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKP  152 (222)
Q Consensus        81 ~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p--------~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~  152 (222)
                      +..+..+++|+.|.|+|++++++||+++|||++......+        .+.+  .++..++                  +
T Consensus        13 ~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------------~   72 (156)
T 3kol_A           13 APGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKV--ANFITPD------------------G   72 (156)
T ss_dssp             CTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSE--EEEECTT------------------S
T ss_pred             CccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcE--EEEEeCC------------------C
Confidence            4456789999999999999999999999999987632221        1222  3344332                  4


Q ss_pred             cEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecCCC
Q 027489          153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       153 ~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ..|+|....+.....    .. ......+..|++|.|+  |+++++++|+++|+++...|.+
T Consensus        73 ~~l~l~~~~~~~~~~----~~-~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~  129 (156)
T 3kol_A           73 TILDLFGEPELSPPD----PN-PEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVT  129 (156)
T ss_dssp             CEEEEEECTTCCCSS----SS-TTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CEEEEEecCCCCcCC----CC-CCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCcee
Confidence            678887653321100    00 0011247889999999  9999999999999999877744

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.52  E-value=7.3e-14  Score=103.94  Aligned_cols=102  Identities=17%  Similarity=0.235  Sum_probs=71.2

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC-CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~-~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      +..+++|+.|.|+|++++++||+++|||++......++ ..+. .++..+                   +..|+|.....
T Consensus         2 ~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~-~~~~~~-------------------~~~l~l~~~~~   61 (126)
T 2p25_A            2 FFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIK-LDLKLG-------------------SQELEIFISDQ   61 (126)
T ss_dssp             TTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEE-EEEEET-------------------TEEEEEEECTT
T ss_pred             cccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceE-EEEecC-------------------CeEEEEEeccC
Confidence            35678999999999999999999999999876532222 2222 233433                   23788875432


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ....+.   ..    ...|..|++|.|+|+++++++|+++|+++...|.+
T Consensus        62 ~~~~~~---~~----~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~  104 (126)
T 2p25_A           62 FPARPS---YP----EALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVD  104 (126)
T ss_dssp             CCCCCC---SS----CCSSCCCEEEECSCHHHHHHHHHHTTCCCCCCEEC
T ss_pred             CCCCCC---CC----CCccceEEEEEeCCHHHHHHHHHHcCCcccccccc
Confidence            211110   11    12477899999999999999999999998766643

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.48  E-value=2.7e-13  Score=103.75  Aligned_cols=98  Identities=19%  Similarity=0.259  Sum_probs=71.8

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..+++|+.|.|+|++++++||+++|||++....+.+++.+..+++. +                   +..|+|....+.
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~-------------------~~~l~l~~~~~~   61 (136)
T 2rk0_A            2 SLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G-------------------GLSIVLREHDGG   61 (136)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T-------------------SCEEEEEEETTC
T ss_pred             CCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C-------------------CCEEEEEeCCCC
Confidence            35689999999999999999999999999987655333345545554 2                   357888765332


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEe
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAK  208 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~  208 (222)
                      .. +.   +..   ...|..|++|.|   +|+++++++|+++|+++..
T Consensus        62 ~~-~~---~~~---~~~g~~h~~f~v~~~~d~~~~~~~l~~~G~~~~~  102 (136)
T 2rk0_A           62 GT-DL---FDE---TRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTP  102 (136)
T ss_dssp             SS-SC---CCT---TSSEEEEEEEEESSHHHHHHHHHHHHHHTCCBCC
T ss_pred             cc-cC---CCC---CCCCcceEEEEeCCHHHHHHHHHHHHHCCCcccC
Confidence            11 11   111   124788999999   8999999999999999763

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.46  E-value=4.5e-13  Score=119.18  Aligned_cols=98  Identities=22%  Similarity=0.379  Sum_probs=77.2

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC-----------CCcEEEEEEecCCCCCCCCCCcccceeecCCCc
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA  153 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p-----------~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~  153 (222)
                      .++++|++|.|+|++++++||+++|||++..+.+++           ++++..+|+++++..               ...
T Consensus        25 ~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~---------------~~~   89 (330)
T 3zi1_A           25 ARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPED---------------DHF   89 (330)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTT---------------TCC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCC---------------Ccc
Confidence            479999999999999999999999999998776655           456778888876421               146


Q ss_pred             EEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecC
Q 027489          154 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       154 ~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P  210 (222)
                      .|||+.+++...      +..+    .|+.||+|.|+|+   .++++++|+++...|
T Consensus        90 ~leL~~~~~~~~------~~~~----~g~~hiaf~V~d~---~~~l~~~G~~~~~~~  133 (330)
T 3zi1_A           90 VAELTYNYGVGD------YKLG----NDFMGITLASSQA---VSNARKLEWPLTEVA  133 (330)
T ss_dssp             EEEEEEETTCCC------CCBC----SSEEEEEEECHHH---HHHHHHHTCCCEEEE
T ss_pred             EEEEeccCCCCc------cccC----CCeeEEEEECchH---HHHHHHcCCceeccC
Confidence            799988765432      3333    3899999999998   577888999988766

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.44  E-value=8.7e-13  Score=101.47  Aligned_cols=97  Identities=9%  Similarity=0.056  Sum_probs=71.9

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +.+...|++|.|+|++++++||+++|||++..+... ++.+..++++.++.                 ...|+|....+.
T Consensus         8 m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~-----------------~~~l~l~~~~~~   69 (139)
T 1twu_A            8 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA-----------------DYHLEFTQYEGG   69 (139)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS-----------------SEEEEEEEETTC
T ss_pred             CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC-----------------ceEEEEeecCCC
Confidence            456678899999999999999999999999866432 23456677775431                 345788754332


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCCH---HHHHHHHHhCCCeEEe
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDV---YKACERFERLGVEFAK  208 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdDV---daa~~rL~~~GV~~v~  208 (222)
                      ..      +..+    .++.|++|.|+|+   ++++++|+++|+++..
T Consensus        70 ~~------~~~~----~~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~  107 (139)
T 1twu_A           70 ST------APVP----HPDSLLVFYVPNAVELAAITSKLKHMGYQEVE  107 (139)
T ss_dssp             CC------CCCC----CTTCEEEEECCCHHHHHHHHHHHHHTTCCEEC
T ss_pred             CC------CCCC----CCccEEEEEeCCcchHHHHHHHHHHcCCcCcC
Confidence            11      2122    3678999999999   9999999999999983

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.42  E-value=1.9e-12  Score=97.26  Aligned_cols=96  Identities=19%  Similarity=0.246  Sum_probs=69.4

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      .+..+++|+.|.|+|++++++||+++|||++....   + .+  +++..+                   +..|+|.....
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~~--~~~~~~-------------------~~~~~l~~~~~   60 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A-GR--IALEFG-------------------HQKINLHQLGN   60 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEET-------------------TEEEEEEETTS
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEec---C-Ce--EEEEcC-------------------CEEEEEEcCCC
Confidence            34568999999999999999999999999998752   1 22  334433                   35677765322


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCC-HHHHHHHHHhCCCeEEecC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDD-VYKACERFERLGVEFAKKP  210 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdD-Vdaa~~rL~~~GV~~v~~P  210 (222)
                      ... +    ...  ....|..|++|.|+| +++++++|+++|+++..+|
T Consensus        61 ~~~-~----~~~--~~~~~~~~~~~~v~dd~~~~~~~l~~~G~~~~~~~  102 (133)
T 3ey7_A           61 EFE-P----KAQ--NVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGP  102 (133)
T ss_dssp             CCS-S----CCT--TCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEE
T ss_pred             Ccc-c----cCC--CCCCCccEEEEEeCcHHHHHHHHHHHCCCccccCC
Confidence            211 1    100  112477899999997 9999999999999998766

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.41  E-value=1.5e-12  Score=98.17  Aligned_cols=94  Identities=11%  Similarity=0.125  Sum_probs=68.0

Q ss_pred             CceEEEEEEEEe--CCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           84 NGYFMQQTMFRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        84 ~~~~l~Hv~L~V--~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      +..+++|+.|.|  +|++++++||+++|||++..+.+..... ...++..+                   +..|+|....
T Consensus         7 ~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~-------------------~~~l~l~~~~   66 (126)
T 2qqz_A            7 YIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKR-GGCWFKCG-------------------NQEIHIGVEQ   66 (126)
T ss_dssp             CEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGG-CCEEEEET-------------------TEEEEEEECT
T ss_pred             ccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCC-CceEEEeC-------------------CEEEEEEecC
Confidence            456899999999  8999999999999999987643211000 01233332                   3467776431


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      +         ..     +.+..|++|.|+|+++++++|+++|+++...|.
T Consensus        67 ~---------~~-----~~~~~~~~f~v~d~~~~~~~l~~~G~~~~~~~~  102 (126)
T 2qqz_A           67 N---------FN-----PAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHA  102 (126)
T ss_dssp             T---------CC-----CCSSSCEEEEETTHHHHHHHHHHTTCCCEEECS
T ss_pred             C---------CC-----CCCceEEEEEcCCHHHHHHHHHHcCCCccCCCC
Confidence            1         10     136689999999999999999999999988874

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.37  E-value=3.8e-12  Score=97.22  Aligned_cols=94  Identities=15%  Similarity=0.141  Sum_probs=68.3

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++....+    .+.  .+..++                  +..|.|....  +
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~~------------------~~~l~l~~~~--~   64 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYV--AFPSSG------------------DALFAIWSGG--E   64 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEE--EEECST------------------TCEEEEESSS--C
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEE--EEEcCC------------------CcEEEEEeCC--C
Confidence            4689999999999999999999999999876432    232  223221                  3567776432  1


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHh---CCCeEEecCCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFER---LGVEFAKKPDGG  213 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~---~GV~~v~~P~dG  213 (222)
                      .      ....   ..+..|++|.|+|   ++++++++++   +|+++..+|.+.
T Consensus        65 ~------~~~~---~~~~~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~  110 (132)
T 3sk2_A           65 E------PVAE---IPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTD  110 (132)
T ss_dssp             C------CCTT---SCCCEEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEE
T ss_pred             C------CcCC---CCCcceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCccc
Confidence            1      1111   1366899999987   9999999999   999999887553

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.37  E-value=5.8e-12  Score=98.05  Aligned_cols=96  Identities=15%  Similarity=0.205  Sum_probs=68.9

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      .+..+++|+.|.|+|++++++||+++|||++....   + .+  .++..+                   +..|+|.....
T Consensus        19 m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~~-------------------~~~l~l~~~~~   73 (152)
T 3huh_A           19 MIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-NR--KALIFG-------------------AQKINLHQQEM   73 (152)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-TE--EEEEET-------------------TEEEEEEETTB
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-Ce--EEEEeC-------------------CeEEEEeccCC
Confidence            35678999999999999999999999999998762   2 22  334443                   34677764322


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeC-CHHHHHHHHHhCCCeEEecC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~Vd-DVdaa~~rL~~~GV~~v~~P  210 (222)
                      ... +    ..  .....|..|++|.|+ |+++++++|+++|+++..+|
T Consensus        74 ~~~-~----~~--~~~~~g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p  115 (152)
T 3huh_A           74 EFE-P----KA--SRPTPGSADLCFITSTPINDVVSEILQAGISIVEGP  115 (152)
T ss_dssp             CCS-S----CC--SSCCTTCCEEEEEESSCHHHHHHHHHHTTCCCSEEE
T ss_pred             cCC-C----cC--cCCCCCccEEEEEecCCHHHHHHHHHHCCCeEecCC
Confidence            111 1    00  011247789999997 99999999999999988766

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.36  E-value=1.2e-11  Score=95.31  Aligned_cols=95  Identities=19%  Similarity=0.253  Sum_probs=69.4

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      |..+++|+.|.|+|++++++||+++|||++....+  .  .  .++..+                   +..|+|......
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~-------------------~~~l~l~~~~~~   55 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T--G--AYLTCG-------------------DLWVCLSYDEAR   55 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECTTC
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C--c--EEEEEC-------------------CEEEEEEECCCC
Confidence            35689999999999999999999999999987542  2  1  344443                   245777653211


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecCCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .  +    ...   ...+..|++|.|+  |+++++++++++|+++..+|..
T Consensus        56 ~--~----~~~---~~~~~~hi~~~v~~~d~~~~~~~l~~~G~~~~~~~~~   97 (141)
T 1npb_A           56 Q--Y----VPP---QESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS   97 (141)
T ss_dssp             C--C----CCG---GGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCS
T ss_pred             C--C----CCC---CCCCceEEEEEeCHHHHHHHHHHHHHCCCeEeccCCC
Confidence            1  0    000   1136789999997  9999999999999999887754

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.36  E-value=1.8e-11  Score=93.51  Aligned_cols=91  Identities=18%  Similarity=0.216  Sum_probs=68.4

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++....+  .  .  .++..+                   +..|+|...... 
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~--~~~~~~-------------------~~~l~l~~~~~~-   55 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q--G--AYLELG-------------------SLWLCLSREPQY-   55 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECTTC-
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C--c--eEEecC-------------------CEEEEEEeCCCC-
Confidence            4689999999999999999999999999986532  2  1  234443                   245777643110 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P~d  212 (222)
                              ..   ...+..|++|.|+  |+++++++++++|+++..+|..
T Consensus        56 --------~~---~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~   94 (135)
T 1nki_A           56 --------GG---PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS   94 (135)
T ss_dssp             --------CC---CCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCS
T ss_pred             --------CC---CCCCcceEEEEccHHHHHHHHHHHHHCCCceecCCCC
Confidence                    00   1136789999998  9999999999999999887765

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.35  E-value=5.3e-12  Score=98.07  Aligned_cols=90  Identities=17%  Similarity=0.193  Sum_probs=67.2

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..+++|+.|.|+|++++++||+++|||++....+  +..+  .++..++                 .+..|+|..... 
T Consensus        25 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~--~~~~~~~-----------------~~~~l~l~~~~~-   82 (141)
T 3ghj_A           25 NIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRW--NFLWVSG-----------------RAGMVVLQEEKE-   82 (141)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTE--EEEEETT-----------------TTEEEEEEECCS-
T ss_pred             eeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcE--EEEEecC-----------------CCcEEEEeccCC-
Confidence            45679999999999999999999999999987643  2233  3333332                 146788864310 


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P  210 (222)
                                     ..+..|++|.|+  |+++++++|+++|+++..++
T Consensus        83 ---------------~~~~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~  116 (141)
T 3ghj_A           83 ---------------NWQQQHFSFRVEKSEIEPLKKALESKGVSVHGPV  116 (141)
T ss_dssp             ---------------SCCCCEEEEEECGGGHHHHHHHHHHTTCCCEEEE
T ss_pred             ---------------CCCCceEEEEEeHHHHHHHHHHHHHCCCeEeCCc
Confidence                           025679999997  99999999999999988433

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.35  E-value=5.8e-12  Score=96.64  Aligned_cols=96  Identities=9%  Similarity=0.077  Sum_probs=65.0

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +...++|+.|.|+|++++++||++ |||++..... +.+.+  .++...+                  +..|+|....+ 
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~~--~~~~~~~------------------~~~l~l~~~~~-   59 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGSE--VHRAVHN------------------GVEFSLYSIQN-   59 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CC--EEEEEET------------------TEEEEEEECCC-
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCCE--EEEEeCC------------------CeEEEEEECCC-
Confidence            357899999999999999999999 9999876421 11123  2232111                  34566643211 


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCe-EEecCCCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE-FAKKPDGG  213 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~-~v~~P~dG  213 (222)
                      .       ...    ..+..|++|.|+|+++++++++++|++ ++.+|.+.
T Consensus        60 ~-------~~~----~~~~~~l~f~v~dvd~~~~~l~~~G~~~~~~~p~~~   99 (128)
T 3g12_A           60 P-------QRS----QIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDM   99 (128)
T ss_dssp             C-------SSC----CCCSEEEEEEESCHHHHHHHHTTSTTCEEEEEEEEC
T ss_pred             C-------cCC----CCCceEEEEEeCCHHHHHHHHHHCCCceeccCceeC
Confidence            1       111    124468999999999999999999999 88777553

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.34  E-value=4.5e-12  Score=93.59  Aligned_cols=88  Identities=15%  Similarity=0.187  Sum_probs=64.9

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      ++++|+.|.|+|++++++||+++|||++....+   ..+  +++..++                  +..|+|.....   
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~~~--~~~~~~~------------------~~~l~l~~~~~---   55 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NAF--AVMRDND------------------GFILTLMKGKE---   55 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TTE--EEEECTT------------------CCEEEEEECSS---
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---CcE--EEEEcCC------------------CcEEEEEeCCC---
Confidence            578999999999999999999999999876431   223  4554432                  34577764211   


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEecCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~~P~  211 (222)
                            ..     ..+..|++|.|   +|+++++++++++|+++.. |.
T Consensus        56 ------~~-----~~~~~~~~~~v~~~~d~~~~~~~l~~~G~~~~~-p~   92 (113)
T 1xqa_A           56 ------VQ-----YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEP-PK   92 (113)
T ss_dssp             ------CC-----CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCC-CE
T ss_pred             ------CC-----CCceeEEEEEcCCHHHHHHHHHHHHHCCCEEec-Cc
Confidence                  00     12568999999   8899999999999999754 53

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.34  E-value=6.8e-12  Score=93.48  Aligned_cols=92  Identities=20%  Similarity=0.189  Sum_probs=64.2

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .++++|+.|.|+|++++++||+++|||++....+    .+  .++..++                   ..+.|... ...
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~~-------------------~~l~l~~~-~~~   56 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIGS-------------------HCLMLSQN-HLV   56 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEETT-------------------EEEEEESS-CSS
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CE--EEEEeCC-------------------eEEEEEcC-CCC
Confidence            4789999999999999999999999999875421    23  3344332                   23444221 100


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                        +    ...   .+.+ .|++|.|+|+++++++++++|++++.+|.+
T Consensus        57 --~----~~~---~~~~-~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~   94 (118)
T 2i7r_A           57 --P----LEN---FQSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTV   94 (118)
T ss_dssp             --S----CCC---CCSC-EEEEEECSCHHHHHHHHHHHTCCEEEEEEE
T ss_pred             --C----ccc---CCCe-EEEEEEECCHHHHHHHHHHCCCceecCCcc
Confidence              0    000   1124 489999999999999999999999887754

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.33  E-value=1.1e-11  Score=93.79  Aligned_cols=94  Identities=19%  Similarity=0.236  Sum_probs=65.8

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEE---EEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSL---YFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l---~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      |..+++|+.|.|+|++++++||+++|||++....  ++..+..   .++..+                   +..|+|...
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~--~~~~~~~~~~~~~~~~-------------------~~~l~l~~~   59 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSS--GDKTFSLSKEKFFLIA-------------------GLWICIMEG   59 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET-------------------TEEEEEEEC
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeec--CCcccccCCceEEEeC-------------------CEEEEEecC
Confidence            3568999999999999999999999999986542  1111100   022221                   356777642


Q ss_pred             CCCCCCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecCCC
Q 027489          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ..         ..     ..+..|++|.|+  |+++++++++++|+++..+|.+
T Consensus        60 ~~---------~~-----~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~   99 (133)
T 2p7o_A           60 DS---------LQ-----ERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPR   99 (133)
T ss_dssp             SS---------CC-----CCCSCEEEEECCGGGHHHHHHHHHHHTCCEECCCCC
T ss_pred             CC---------CC-----CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCCcc
Confidence            11         00     136789999995  9999999999999999888754

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.31  E-value=1.9e-11  Score=93.48  Aligned_cols=96  Identities=17%  Similarity=0.133  Sum_probs=67.0

Q ss_pred             EEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCC
Q 027489           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (222)
Q Consensus        90 Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~  169 (222)
                      .+.|.|+|++++++||+++|||++..+.+.+ +....+.+..+                   +..|.|...+.....   
T Consensus         5 ~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~-------------------~~~l~l~~~~~~~~~---   61 (137)
T 3itw_A            5 VVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG-------------------GGIVMVRRTGEPYTV---   61 (137)
T ss_dssp             EEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS-------------------SSEEEEEETTCCSSC---
T ss_pred             EEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC-------------------CeEEEEEecCCCcCc---
Confidence            5789999999999999999999998775543 33333444433                   346777643321110   


Q ss_pred             ccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCC
Q 027489          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG  213 (222)
Q Consensus       170 ~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG  213 (222)
                        ...+   ..++.|++|.|+|+++++++++++|+++..+|.+.
T Consensus        62 --~~~~---~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~  100 (137)
T 3itw_A           62 --SCAG---GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDK  100 (137)
T ss_dssp             --EECC---CCCCCEEEEEESCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             --cCCC---CCcEEEEEEEeCCHHHHHHHHHHcCCeeccCcccc
Confidence              0011   12334999999999999999999999998887553

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.30  E-value=2e-11  Score=95.18  Aligned_cols=99  Identities=16%  Similarity=0.187  Sum_probs=68.5

Q ss_pred             ccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        80 ~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      .+..+..+++|+.|.|+|++++++||+++|||++....   + .+  .++..+                   +..|+|..
T Consensus        20 m~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~g-------------------~~~l~l~~   74 (147)
T 3zw5_A           20 FQSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---E-DR--KALCFG-------------------DQKFNLHE   74 (147)
T ss_dssp             HHHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEET-------------------TEEEEEEE
T ss_pred             ecceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---C-Cc--eEEEEC-------------------CcEEEEEE
Confidence            34456789999999999999999999999999998542   2 22  223333                   24566654


Q ss_pred             cCCCCCCCCCccCCCCCCCCCceeEEEEEeC-CHHHHHHHHHhCCCeEEecC
Q 027489          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       160 ~~g~e~d~~~~~y~~gn~~p~G~~HIaf~Vd-DVdaa~~rL~~~GV~~v~~P  210 (222)
                      ..... .+.   .  .. ...|..|++|.++ |+++++++|+++|+++...|
T Consensus        75 ~~~~~-~~~---~--~~-~~~g~~~~~~~~~~dl~~~~~~l~~~G~~~~~~p  119 (147)
T 3zw5_A           75 VGKEF-EPK---A--AH-PVPGSLDICLITEVPLEEMIQHLKACDVPIEEGP  119 (147)
T ss_dssp             TTSCC-SSC---C--SS-CCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEE
T ss_pred             cCCCc-Ccc---c--CC-CCCCCceEEEEeccCHHHHHHHHHHcCCceeeCc
Confidence            32211 110   0  01 1136679999886 99999999999999987655

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.30  E-value=1.6e-11  Score=94.31  Aligned_cols=93  Identities=18%  Similarity=0.244  Sum_probs=66.8

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEE---EEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSL---YFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l---~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      ..+++|+.|.|+|++++++||+++|||++....+  +..+..   .++..+                   +..|+|....
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~g-------------------~~~l~l~~~~   60 (139)
T 1r9c_A            2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASD--TEQFSLSREKFFLIG-------------------DIWVAIMQGE   60 (139)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGG--GSTTCCSCEEEEEET-------------------TEEEEEEECC
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCC--CccccccceEEEEEC-------------------CEEEEEEeCC
Confidence            4689999999999999999999999999876532  111100   022222                   3567776421


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecCCC
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .         ..     ..+..|++|.|+  |+++++++++++|+++..+|.+
T Consensus        61 ~---------~~-----~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~   99 (139)
T 1r9c_A           61 K---------LA-----ERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPR   99 (139)
T ss_dssp             C---------CS-----SCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-
T ss_pred             C---------CC-----CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCccc
Confidence            1         00     136789999999  9999999999999999877644

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.30  E-value=9.4e-12  Score=98.03  Aligned_cols=96  Identities=16%  Similarity=0.211  Sum_probs=65.5

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..+++|+.|.|+|++++++||+++|||++....  +  .+  .++..++                  +..|+|......
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~--~--~~--~~~~~~~------------------g~~l~l~~~~~~   58 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESS--P--TF--AMFVMKT------------------GLRLGLWAQEEI   58 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEEC--S--SE--EEEECTT------------------SCEEEEEEGGGC
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccC--C--CE--EEEEcCC------------------CcEEEEecCCcC
Confidence            3568999999999999999999999999987653  2  23  3344322                  356777543221


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ..      ...   ...+..|++|.|+|   +++++++|+++|++++.+|.+
T Consensus        59 ~~------~~~---~~~~~~~l~f~v~d~~dvd~~~~~l~~~G~~i~~~p~~  101 (148)
T 3rhe_A           59 EP------KAH---QTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQ  101 (148)
T ss_dssp             SS------CCC-------CEEEEEECSCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             Cc------ccc---CCCCeEEEEEEcCCHHHHHHHHHHHHhCCCEEEeCCee
Confidence            11      000   11355799999987   999999999999999887755

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.29  E-value=6.9e-12  Score=98.64  Aligned_cols=100  Identities=15%  Similarity=0.125  Sum_probs=65.0

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      |..++.|+.|.|+|++++++||+++|||++...   ++..+.  ++..++.. +     +...+ ......+.+...   
T Consensus        22 M~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~--~~~~~~~~-~-----~l~~~-~~~~~~~~l~~~---   86 (148)
T 2r6u_A           22 MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDYS--MVTTGPVG-E-----SGMPD-EPGYINGGMMQR---   86 (148)
T ss_dssp             TCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTEE--EEECSCBC-T-----TSSBC-SSSCBCEEEEES---
T ss_pred             cCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCEE--EEEeCCcc-e-----eeccc-CCcccccceeec---
Confidence            456899999999999999999999999998763   223343  34433210 0     00000 000111233211   


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                               .    .+.++ |++|.|+|+++++++|+++|+++..+|.+
T Consensus        87 ---------~----~~~g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~  121 (148)
T 2r6u_A           87 ---------G----EVTTP-VVTVDVESIESALERIESLGGKTVTGRTP  121 (148)
T ss_dssp             ---------S----SSCSC-EEEEECSCHHHHHHHHHHTTCEEEEEEEE
T ss_pred             ---------C----CCCeE-EEEEEcCCHHHHHHHHHHcCCeEecCCee
Confidence                     0    01254 99999999999999999999999877643

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.28  E-value=3.5e-11  Score=107.36  Aligned_cols=111  Identities=16%  Similarity=0.264  Sum_probs=75.1

Q ss_pred             CCCceEEEEEEEEeC--CHHHHHHHHHhccCcEEEEEec--CCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEE
Q 027489           82 ATNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLD--FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~--DlekSi~FY~~vLGf~l~~~~~--~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL  157 (222)
                      .+...+++|++|.|+  |++++++||+++|||++....+  .+.......|+..++                 ....|+|
T Consensus       153 ~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~-----------------g~~~l~l  215 (357)
T 2r5v_A          153 DVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS-----------------GAVTLTL  215 (357)
T ss_dssp             TCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT-----------------SCCEEEE
T ss_pred             CCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC-----------------CCEEEEE
Confidence            456789999999999  9999999999999999886432  222233445555432                 1356888


Q ss_pred             eecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecC
Q 027489          158 THNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       158 ~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P  210 (222)
                      ..............+...+ ...|++||||.|+|+++++++|+++|++++..|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~-~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p  267 (357)
T 2r5v_A          216 IEPDRNADPGQIDEFLKDH-QGAGVQHIAFNSNDAVRAVKALSERGVEFLKTP  267 (357)
T ss_dssp             EEECTTSBCCHHHHHHHHH-TSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             eeecCCCCCchhHHHHHhc-CCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCc
Confidence            6532111000000011000 014899999999999999999999999998877

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.28  E-value=6.8e-12  Score=98.66  Aligned_cols=90  Identities=20%  Similarity=0.275  Sum_probs=64.7

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      ++. +.|.|+|++++++||+++|||++..+...++..+.+.+++                     .  ++|+......  
T Consensus         7 ~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~---------------------~--~~l~~~~~~~--   60 (144)
T 3r6a_A            7 QIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS---------------------T--ILLIAGSEEA--   60 (144)
T ss_dssp             EEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET---------------------T--EEEEESCHHH--
T ss_pred             EEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec---------------------c--EEEecCCccc--
Confidence            344 8999999999999999999999887655444444433322                     1  5555432100  


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                           ..     +.+..|++|.|+|+++++++|+++|+++..+|.+
T Consensus        61 -----~~-----~~~~~hl~f~V~d~d~~~~~l~~~G~~v~~~p~~   96 (144)
T 3r6a_A           61 -----LK-----PFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSK   96 (144)
T ss_dssp             -----HG-----GGGGCCEEEEESCHHHHHHHHHHTTCEEEEEEEE
T ss_pred             -----CC-----CCcceEEEEEeCCHHHHHHHHHHcCCEEecCCcc
Confidence                 00     1245799999999999999999999999888754

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.27  E-value=7.6e-11  Score=89.08  Aligned_cols=90  Identities=9%  Similarity=0.011  Sum_probs=66.9

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .+...|+.|.|+|++++++||+++|||++...  .  ..+  .++..+                   +..|+|....+. 
T Consensus         3 ~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~--~--~~~--~~~~~~-------------------~~~l~l~~~~~~-   56 (124)
T 1xrk_A            3 KLTSAVPVLTARDVAEAVEFWTDRLGFSRVFV--E--DDF--AGVVRD-------------------DVTLFISAVQDQ-   56 (124)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEE--C--SSE--EEEEET-------------------TEEEEEEECSCT-
T ss_pred             cccceeEEEEcCCHHHHHHHHHHccCceEEec--C--CCE--EEEEEC-------------------CEEEEEEcCCCC-
Confidence            46678999999999999999999999999865  1  223  334432                   356777643210 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhC------CC--eEEecCCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL------GV--EFAKKPDGG  213 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~------GV--~~v~~P~dG  213 (222)
                              .     ..+..|++|.|+|+++++++++++      |+  +++.+|.+.
T Consensus        57 --------~-----~~~~~~~~~~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~  100 (124)
T 1xrk_A           57 --------V-----VPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQ  100 (124)
T ss_dssp             --------T-----TGGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEE
T ss_pred             --------C-----CCCceEEEEEECCHHHHHHHHHHhcccccCCccccccCCceec
Confidence                    0     013469999999999999999999      99  888877553

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.27  E-value=5.6e-11  Score=90.25  Aligned_cols=91  Identities=16%  Similarity=0.124  Sum_probs=63.7

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .++++|+.|.|+|++++++||+++|||++....+    .+  .++...+                   ..+.|...... 
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~g-------------------~~~~l~~~~~~-   60 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DR--ITLDFFG-------------------DQLVCHLSDRW-   60 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEETT-------------------EEEEEEECSCS-
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----Cc--EEEEEeC-------------------CEEEEEEcCcc-
Confidence            5689999999999999999999999999965432    22  2333221                   23445432111 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                      ..    +      ...+..|++|.|+   |+++++++|+++|++++.+|.
T Consensus        61 ~~----~------~~~~~~h~~~~~~~~~d~~~~~~~l~~~G~~~~~~p~  100 (135)
T 3rri_A           61 DR----E------VSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLS  100 (135)
T ss_dssp             CS----S------CCSSSCEEEEECSSHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             cc----c------CCCCCCeEEEEEcChHhHHHHHHHHHHcCCceecCcc
Confidence            00    0      0135679999985   599999999999999977663

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.26  E-value=1.4e-11  Score=96.24  Aligned_cols=95  Identities=19%  Similarity=0.327  Sum_probs=68.0

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      .++.|+.|.|+|++++++||+++|||++....  +  .+  .++..++                  +..|+|........
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~~--~~~~~~~------------------~~~l~l~~~~~~~~   79 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESS--P--TF--SLFVLAN------------------GMKLGLWSRHTVEP   79 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--TE--EEEECTT------------------SCEEEEEETTSCSS
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--Ce--EEEEcCC------------------CcEEEEEeCCCCCC
Confidence            48999999999999999999999999987653  2  23  2333322                  34677764322111


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG  213 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~dG  213 (222)
                            ...   ...+..|++|.|+   |+++++++|+++|++++.+|.+.
T Consensus        80 ------~~~---~~~~~~hl~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~  121 (144)
T 2kjz_A           80 ------KAS---VTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKM  121 (144)
T ss_dssp             ------CCC---CSSSSCEEEEECSSHHHHHHHHHHHHHTTCCCCSCCEEE
T ss_pred             ------ccC---CCCCceEEEEEeCCHHHHHHHHHHHHHCCCeEecCceec
Confidence                  100   1136789999997   58999999999999998877553

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.25  E-value=5e-11  Score=105.95  Aligned_cols=96  Identities=13%  Similarity=0.088  Sum_probs=73.3

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ...+++|+.|.|+|++++++||+++|||++..... +++.....|+..++.                 ...|.+......
T Consensus       150 ~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~-----------------~~~l~~~~~~~~  211 (339)
T 3lm4_A          150 PVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL-----------------GHEVACMRDMTG  211 (339)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS-----------------SCSEEEEECTTS
T ss_pred             CcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC-----------------ceEEEEeccCCC
Confidence            57899999999999999999999999999987655 334344567765431                 234666542110


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~  211 (222)
                                    .+.+++|++|.|+|   +++++++|+++|+++...|.
T Consensus       212 --------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~  248 (339)
T 3lm4_A          212 --------------GHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPD  248 (339)
T ss_dssp             --------------CCSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             --------------CCCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCc
Confidence                          12378999999999   88899999999999987774

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.25  E-value=1.8e-11  Score=96.98  Aligned_cols=103  Identities=18%  Similarity=0.213  Sum_probs=68.8

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..+++|+.|.|+|++++++||+++|||++....+  + .  .+|+..+                   +..++|......
T Consensus         5 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~-~--~~~~~~g-------------------~~~~~l~~~~~~   60 (160)
T 3r4q_A            5 PPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP--G-Q--LVFFKCG-------------------RQMLLLFDPQES   60 (160)
T ss_dssp             CCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET--T-T--EEEEEET-------------------TEEEEEECHHHH
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC--C-c--EEEEeCC-------------------CEEEEEEecCCc
Confidence            45789999999999999999999999999987643  1 1  2344433                   245666532211


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEecCCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      .. +... .........|+.|++|.|   +|+++++++|+++|+++..++..
T Consensus        61 ~~-~~~~-~~~~~~~~~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~  110 (160)
T 3r4q_A           61 SR-ADAN-NPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRW  110 (160)
T ss_dssp             TC-CCTT-CCSCCCEEEEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEEC
T ss_pred             cC-cccc-CCCCcCCCcceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccc
Confidence            00 0000 000000113678999999   89999999999999998765543

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.23  E-value=2.5e-11  Score=112.34  Aligned_cols=107  Identities=11%  Similarity=0.284  Sum_probs=73.6

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC-----CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEE
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~-----~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL  157 (222)
                      ....+++|+++.|+|++++++||+++|||++.+..+.++     .++...++...+                 ....|+|
T Consensus       198 ~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-----------------g~~~l~l  260 (424)
T 1sqd_A          198 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND-----------------EMVLLPI  260 (424)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT-----------------SCSEEEE
T ss_pred             CCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCC-----------------CcEEEEE
Confidence            346789999999999999999999999999988764332     133444554332                 1356777


Q ss_pred             eecCCC-CCCCCCccC---CCCCCCCCceeEEEEEeCCHHHHHHHHHh----CCCeEEecC
Q 027489          158 THNWGT-ESDPDFKGY---HNGNSEPRGFGHIGITVDDVYKACERFER----LGVEFAKKP  210 (222)
Q Consensus       158 ~~~~g~-e~d~~~~~y---~~gn~~p~G~~HIaf~VdDVdaa~~rL~~----~GV~~v~~P  210 (222)
                      ...... ........|   +.|    .|++||||.|+|+++++++|++    +|++++..|
T Consensus       261 ~e~~~~~~~~s~i~~fl~~~~G----~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          261 NEPVHGTKRKSQIQTYLEHNEG----AGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             EEECCC---CCHHHHHHHHHTS----CEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             ecccccCCCcchhhhhhhhcCC----CCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            654210 000000012   234    3899999999999999999999    899999875

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.22  E-value=2.8e-11  Score=89.89  Aligned_cols=89  Identities=16%  Similarity=0.190  Sum_probs=62.5

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      ..+ |+.|.|+|++++++||+++|||++..+.    +.+  .++..++.                ....|+|....+   
T Consensus         7 ~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~~~----------------~~~~l~l~~~~~---   60 (119)
T 2pjs_A            7 RRV-VANIATPEPARAQAFYGDILGMPVAMDH----GWI--VTHASPLE----------------AHAQVSFAREGG---   60 (119)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----SSE--EEEEEEEE----------------EEEEEEEESSSB---
T ss_pred             eEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----CEE--EEEecCCC----------------CcEEEEEEcCCC---
Confidence            456 9999999999999999999999987641    222  12232210                023455542210   


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                              .    ..+..|++|.|+|+++++++++++|+++..+|.+
T Consensus        61 --------~----~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~   95 (119)
T 2pjs_A           61 --------S----GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVT   95 (119)
T ss_dssp             --------T----TBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEE
T ss_pred             --------C----CCceeEEEEEECCHHHHHHHHHHCCCccccCCcc
Confidence                    0    1245799999999999999999999998877654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.22  E-value=2.6e-11  Score=112.01  Aligned_cols=107  Identities=13%  Similarity=0.276  Sum_probs=73.5

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCC-----cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEE
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-----KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~-----~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL  157 (222)
                      ....+++|+++.|+|++++++||+++|||++....+.++.     +....++..++                 ....|+|
T Consensus       195 ~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-----------------g~i~l~l  257 (418)
T 1sp8_A          195 YGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS-----------------ENVLLPL  257 (418)
T ss_dssp             CSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS-----------------SCCEEEE
T ss_pred             CCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC-----------------CcEEEEE
Confidence            3467899999999999999999999999999887643321     23334554332                 1356666


Q ss_pred             eecCCC-CCCCCCccC---CCCCCCCCceeEEEEEeCCHHHHHHHHHh----CCCeEEecC
Q 027489          158 THNWGT-ESDPDFKGY---HNGNSEPRGFGHIGITVDDVYKACERFER----LGVEFAKKP  210 (222)
Q Consensus       158 ~~~~g~-e~d~~~~~y---~~gn~~p~G~~HIaf~VdDVdaa~~rL~~----~GV~~v~~P  210 (222)
                      ...... ........|   +.|    .|++||||.|+|+++++++|++    +|+++...|
T Consensus       258 ~e~~~~~~~~s~i~~fl~~~~G----~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          258 NEPVHGTKRRSQIQTFLDHHGG----PGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             EEECCCSSSCCHHHHHHHHHTS----SEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             eecccccCCCcchhhhhhccCC----CCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            543211 100000011   234    3899999999999999999999    799999876

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.20  E-value=3.6e-11  Score=110.50  Aligned_cols=109  Identities=14%  Similarity=0.264  Sum_probs=76.5

Q ss_pred             CCCceEEEEEEEEeCC--HHHHHHHHHhccCcEEEEEec---C--CCCcEEEEEEecCCCCCCCCCCcccceeecCCCcE
Q 027489           82 ATNGYFMQQTMFRIKD--PKVSLDFYSRVLGMSLLKRLD---F--PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT  154 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~D--lekSi~FY~~vLGf~l~~~~~---~--p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~  154 (222)
                      .....+++|+++.|+|  ++++++||+++|||+..+..+   .  +.......++..++                 +...
T Consensus       168 ~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~-----------------g~v~  230 (393)
T 3isq_A          168 KCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE-----------------ESIK  230 (393)
T ss_dssp             CCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT-----------------SSCE
T ss_pred             CCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC-----------------CCEE
Confidence            3456789999999998  999999999999999987644   2  12234444554332                 1467


Q ss_pred             EEEeecCCCCCCC---CCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          155 IELTHNWGTESDP---DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       155 IEL~~~~g~e~d~---~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      |+|........+.   .|...+.|    .|++||||.|+|+++++++|+++|++++..|.
T Consensus       231 i~L~ep~~~~~~s~I~~fL~~~~G----~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~  286 (393)
T 3isq_A          231 MPINEPAPGKKKSQIQEYVDYNGG----AGVQHIALKTEDIITAIRHLRERGLEFLSVPS  286 (393)
T ss_dssp             EEEEEEECCSBCCHHHHHHHHHTS----SEEEEEEEEESCHHHHHHHHHHTTCCBCCCCH
T ss_pred             EEEecCCCCCCCCHHHHHHHHcCC----CCcceEEEEcCCHHHHHHHHHHcCCccCCCCc
Confidence            8887543211110   00001223    48999999999999999999999999998773

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.20  E-value=2.2e-10  Score=102.31  Aligned_cols=100  Identities=22%  Similarity=0.280  Sum_probs=70.3

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecC-C-CCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF-P-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~-p-~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      +..+++|++|.|+|++++++||+++|||++..+... + .+.+.++ ++.+.+.               .+..|+|....
T Consensus         5 ~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~-~~~~~g~---------------~g~~l~l~~~~   68 (335)
T 3oaj_A            5 KTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLY-FGNEGGK---------------PGTIITFFPWA   68 (335)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEE-EESTTCC---------------TTSEEEEEECT
T ss_pred             cCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEE-EecCCCC---------------CCcEEEEEECC
Confidence            456899999999999999999999999999876422 1 1223333 3432110               14678887542


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEe
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAK  208 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~  208 (222)
                      +...      ...+   ..++.|+||.|+  |+++++++|+++|+++..
T Consensus        69 ~~~~------~~~~---~~~~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~  108 (335)
T 3oaj_A           69 GARQ------GVIG---DGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK  108 (335)
T ss_dssp             TCCB------CBCC---BSEEEEEEEEECTTCHHHHHHHHHHTTCCCEE
T ss_pred             CCCC------CCCC---CCceEEEEEEecHHHHHHHHHHHHhCcceeee
Confidence            2110      1112   247899999999  999999999999999875

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.19  E-value=2.1e-10  Score=99.62  Aligned_cols=96  Identities=14%  Similarity=0.125  Sum_probs=69.7

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC-CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~-~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      ....+++|+.|.|+|++++++||+++|||++......+. ++....|+..++.                 ...+.+....
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~  209 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK-----------------VHDIAFVEYP  209 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS-----------------SCSEEEEECS
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC-----------------ceeEEEecCC
Confidence            467899999999999999999999999999887655443 2344566665431                 1234443210


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeCCHHH---HHHHHHhCCCeEEecCC
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPD  211 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVda---a~~rL~~~GV~~v~~P~  211 (222)
                                      .+.+++|+||.|+|+++   ++++|+++|+++...|.
T Consensus       210 ----------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~  246 (309)
T 3hpy_A          210 ----------------EKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPT  246 (309)
T ss_dssp             ----------------STTEEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSE
T ss_pred             ----------------CCCceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCc
Confidence                            01368999999988654   68999999999876664

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.19  E-value=1.8e-11  Score=95.53  Aligned_cols=98  Identities=17%  Similarity=0.149  Sum_probs=68.4

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++....  +  .+  .++..+                   +..|+|....+..
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~--~~~~~~-------------------~~~l~l~~~~~~~   57 (150)
T 3bqx_A            3 LQQVAVITLGIGDLEASARFYGEGFGWAPVFRN--P--EI--IFYQMN-------------------GFVLATWLVQNLQ   57 (150)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--S--SE--EEEECS-------------------SSEEEEEEHHHHH
T ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--C--CE--EEEEcC-------------------CEEEEEEeccccc
Confidence            457899999999999999999999999987652  1  23  344432                   3567776532110


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEecCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ....   ....  ...+..|++|.|   +|+++++++|+++|++++.+|.+
T Consensus        58 ~~~~---~~~~--~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~  103 (150)
T 3bqx_A           58 EDVG---VAVT--SRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADA  103 (150)
T ss_dssp             HHHS---SCCC--SSCCSCEEEEECSSGGGHHHHHHHHHHTTCEEEEEEEC
T ss_pred             cccC---CCCC--CCCCeEEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcc
Confidence            0000   0000  013567999999   89999999999999999887754

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.18  E-value=7.6e-11  Score=106.89  Aligned_cols=109  Identities=15%  Similarity=0.239  Sum_probs=75.4

Q ss_pred             cCCCceEEEEEEEEeC--CHHHHHHHHHhccCcEEEEEec-----CCCCcEEEEEEecCCCCCCCCCCcccceeecCCCc
Q 027489           81 EATNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLD-----FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA  153 (222)
Q Consensus        81 ~~t~~~~l~Hv~L~V~--DlekSi~FY~~vLGf~l~~~~~-----~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~  153 (222)
                      +.+...+++|+++.|+  |++++++||+++|||++....+     .+...+...++...+                 +..
T Consensus       178 ~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~-----------------g~v  240 (381)
T 1t47_A          178 AHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT-----------------LKV  240 (381)
T ss_dssp             SSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT-----------------SCS
T ss_pred             CCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC-----------------CcE
Confidence            3456789999999999  9999999999999999876532     222234444554322                 135


Q ss_pred             EEEEeecCCCCCCCCC-ccC---CCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          154 TIELTHNWGTESDPDF-KGY---HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       154 ~IEL~~~~g~e~d~~~-~~y---~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .|+|........ ... ..+   +.|    .|++||||.|+|+++++++|+++|+++...|.
T Consensus       241 ~i~l~~~~~~~~-~s~~~~~l~~~~g----~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~  297 (381)
T 1t47_A          241 KFPINEPALAKK-KSQIDEYLEFYGG----AGVQHIALNTGDIVETVRTMRAAGVQFLDTPD  297 (381)
T ss_dssp             EEEEEEECCSSS-CCHHHHHHHHHTS----CEEEEEEEECSCHHHHHHHHHHTTCCBCCCCG
T ss_pred             EEEEecCCcCCC-ccHHHHHHHHhCC----CCcceEEEecCCHHHHHHHHHHcCCccCCCCc
Confidence            677765421111 000 001   122    48999999999999999999999999988774

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.18  E-value=1e-10  Score=89.67  Aligned_cols=100  Identities=18%  Similarity=0.157  Sum_probs=67.1

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .+++.|+.|.|+|++++++||++ |||++..+.+  ...+.  .+..++                  +..|+|.......
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~~--~~~~~~------------------~~~l~l~~~~~~~   58 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPHT--EAVLDG------------------GIRLAWDTVETVR   58 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSEE--EEECTT------------------SCEEEEEEHHHHH
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCceE--EEEcCC------------------CeEEEEecCccch
Confidence            46899999999999999999998 9999865422  22232  223221                  3567776421100


Q ss_pred             C-CCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCC
Q 027489          165 S-DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~-d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      . .+.   ....  ...+..|++|.|+   |+++++++|+++|+++..+|.+
T Consensus        59 ~~~~~---~~~~--~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~  105 (138)
T 2a4x_A           59 SYDPE---WQAP--TGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWN  105 (138)
T ss_dssp             HHCTT---CCCC--BSSCSEEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             hhCcc---cCCC--CCCCeEEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcc
Confidence            0 000   0000  1136789999999   9999999999999999887754

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.17  E-value=2.4e-10  Score=100.53  Aligned_cols=93  Identities=13%  Similarity=0.186  Sum_probs=69.7

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      +...+++|+.|.|+|++++++|| ++|||++......+++.....|+..++.                 ...+++...  
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~-----------------~~~~~~~~~--  207 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT-----------------VHDTALTGG--  207 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS-----------------SCSEEEEES--
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC-----------------cccEEEeCC--
Confidence            56789999999999999999999 9999998876554444444556654321                 233455421  


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCCHHH---HHHHHHhCCC--eEEecC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGV--EFAKKP  210 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVda---a~~rL~~~GV--~~v~~P  210 (222)
                                 .+    .+++|++|.|+|+++   ++++|+++|+  ++...|
T Consensus       208 -----------~~----~~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p  245 (323)
T 1f1u_A          208 -----------NG----PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGP  245 (323)
T ss_dssp             -----------SB----SEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred             -----------CC----CCceEEEEECCCHHHHHHHHHHHHHCCCccccccCC
Confidence                       01    278999999999998   9999999999  887544

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.16  E-value=5.1e-10  Score=84.54  Aligned_cols=88  Identities=16%  Similarity=0.239  Sum_probs=63.6

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      ...|+.|.|+|++++++||++ |||++..+    +..+  .++..+                   +..|+|....+..  
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~~--~~~~~~-------------------~~~l~l~~~~~~~--   54 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFR----DAGW--MILQRG-------------------DLMLEFFAHPGLD--   54 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSSE--EEEEET-------------------TEEEEEEECTTCC--
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCCE--EEEEeC-------------------CEEEEEEeCCCCC--
Confidence            356899999999999999998 99999865    1233  344443                   3467776432110  


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeE-------EecCCCC
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF-------AKKPDGG  213 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~-------v~~P~dG  213 (222)
                           .      ..+..|++|.|+|+++++++++++|+++       +.+|.+.
T Consensus        55 -----~------~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~   97 (126)
T 1ecs_A           55 -----P------LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQ   97 (126)
T ss_dssp             -----G------GGCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEEC
T ss_pred             -----C------CCcceEEEEEECCHHHHHHHHHHCCCccccccCccccCCccc
Confidence                 0      0255799999999999999999999994       6666543

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.15  E-value=3.6e-10  Score=102.42  Aligned_cols=105  Identities=21%  Similarity=0.220  Sum_probs=74.2

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCC--cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~--~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      ....+++|+.|.|+|++++++||+++|||++..+...+.+  ....++++.+                   ...|+|...
T Consensus        18 ~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~l~~~   78 (381)
T 1t47_A           18 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-------------------SARFVLTSV   78 (381)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEE
T ss_pred             CcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC-------------------CEEEEEecC
Confidence            3467999999999999999999999999999876432111  2344444543                   356888754


Q ss_pred             CCCCCCCC---CccC--CCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          161 WGTESDPD---FKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       161 ~g~e~d~~---~~~y--~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      ..+.. +.   ...+  ..|    .|+.|+||.|+|+++++++++++|++++.+|.
T Consensus        79 ~~~~~-~~~~~~~~~~~~~g----~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~  129 (381)
T 1t47_A           79 IKPAT-PWGHFLADHVAEHG----DGVVDLAIEVPDARAAHAYAIEHGARSVAEPY  129 (381)
T ss_dssp             SSCCS-HHHHHHHHHHHHHC----SEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCCC-cchhHHHHHHHhcC----CceEEEEEEECCHHHHHHHHHHcCCEEeeccc
Confidence            22211 00   0000  012    38899999999999999999999999998774

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.15  E-value=3.1e-10  Score=88.65  Aligned_cols=94  Identities=11%  Similarity=0.175  Sum_probs=67.8

Q ss_pred             CceEEEEEEEEeCCHHHHHHHH---HhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFY---SRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY---~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      ...+++|+.|.|+|++++++||   +++|||++....+  . ..  .|+. +                   +..|+|...
T Consensus        17 ~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~-~~--~~~~-g-------------------~~~l~l~~~   71 (146)
T 3ct8_A           17 FQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--R-GK--SYKH-G-------------------KTYLVFVQT   71 (146)
T ss_dssp             TTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--T-EE--EEEE-T-------------------TEEEEEEEC
T ss_pred             cccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--C-Cc--eEec-C-------------------CeEEEEEEc
Confidence            4568999999999999999999   9999999987543  2 11  3444 2                   356888754


Q ss_pred             CCCCCCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEe
Q 027489          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAK  208 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~  208 (222)
                      .+.....   ++..+   ..|+.|++|.|+   |+++++++++++|+++..
T Consensus        72 ~~~~~~~---~~~~~---~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~  116 (146)
T 3ct8_A           72 EDRFQTP---TFHRK---RTGLNHLAFHAASREKVDELTQKLKERGDPILY  116 (146)
T ss_dssp             CGGGSCS---CCCTT---SSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCC
T ss_pred             CCCcccc---ccccc---CCCceEEEEECCCHHHHHHHHHHHHHcCCcccc
Confidence            3210000   11111   136789999999   999999999999999987

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.14  E-value=2.5e-10  Score=87.47  Aligned_cols=95  Identities=15%  Similarity=0.176  Sum_probs=62.7

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .+.--+..|.|+|++++++||+++|||++..+.+  .  +  .++..+                   +..|+|....+..
T Consensus         5 ~~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~l~~~-------------------~~~l~l~~~~~~~   59 (134)
T 3fcd_A            5 DIHQITPFLHIPDMQEALTLFCDTLGFELKYRHS--N--Y--AYLELS-------------------GCGLRLLEEPARK   59 (134)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECCCC-
T ss_pred             hhhcceeEEEECCHHHHHHHHHhccCcEEEEeCC--C--e--EEEEEC-------------------CEEEEEEeCCCCC
Confidence            3455677899999999999999999999987532  2  3  344443                   3567776543211


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCC----CeEEecCCCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG----VEFAKKPDGGK  214 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~G----V~~v~~P~dG~  214 (222)
                      .      ...+    .+..|++|.|+|+++++++++++|    +++..+|.+..
T Consensus        60 ~------~~~~----~~~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~  103 (134)
T 3fcd_A           60 I------IPDG----IARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMP  103 (134)
T ss_dssp             ------------------EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECT
T ss_pred             c------CCCC----CceEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccC
Confidence            1      1111    133699999999999999999654    45566665433

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.14  E-value=9.3e-11  Score=88.36  Aligned_cols=87  Identities=11%  Similarity=0.018  Sum_probs=63.4

Q ss_pred             EEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        88 l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      -.++.|.|+|++++++||+++|||++...   + ..+  .++..+                   +..|+|....+     
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~---~-~~~--~~~~~~-------------------~~~l~l~~~~~-----   55 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFG---D-RDF--AGVRRG-------------------DIRLHISRTEH-----   55 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEE---C-SSE--EEEEET-------------------TEEEEEEECSC-----
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeC---C-CCE--EEEEEC-------------------CEEEEEEcCCC-----
Confidence            34788999999999999999999999865   1 223  344433                   35677754211     


Q ss_pred             CCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhC------CC--eEEecCCCC
Q 027489          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL------GV--EFAKKPDGG  213 (222)
Q Consensus       168 ~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~------GV--~~v~~P~dG  213 (222)
                          ...     .+..|++|.|+|+++++++++++      |+  +++.+|.+.
T Consensus        56 ----~~~-----~~~~~~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~  100 (122)
T 1qto_A           56 ----QIV-----ADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGES  100 (122)
T ss_dssp             ----HHH-----HTTCEEEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEE
T ss_pred             ----CCC-----CCceEEEEEECCHHHHHHHHHhhccccccCccccccCCCcCC
Confidence                000     12369999999999999999999      99  888877553

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.13  E-value=7.5e-10  Score=98.29  Aligned_cols=92  Identities=18%  Similarity=0.319  Sum_probs=69.9

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d  166 (222)
                      .+.|+.|.|+|++++++||+++|||++....+..  .  .+|+..++.                 ...|++...++.   
T Consensus       159 ~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~--~~~l~~g~~-----------------~~~l~l~~~~~~---  214 (330)
T 3zi1_A          159 PVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK--Q--RALLGYADN-----------------QCKLELQGVKGG---  214 (330)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT--T--EEEEESSTT-----------------SCEEEEEECSSC---
T ss_pred             ceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC--c--EEEEEeCCc-----------------eEEEEECCCCCC---
Confidence            4789999999999999999999999998875433  2  346666541                 356777655421   


Q ss_pred             CCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecCC
Q 027489          167 PDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       167 ~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P~  211 (222)
                           ...+    .+++|++|.|+  |+++++++|+++|+++..+|.
T Consensus       215 -----~~~~----~~~~hiaf~v~~~dld~~~~rl~~~G~~i~~~~~  252 (330)
T 3zi1_A          215 -----VDHA----AAFGRIAFSCPQKELPDLEDLMKRENQKILTPLV  252 (330)
T ss_dssp             -----CCCB----TTCCEEEEEECGGGHHHHHHHHHHTTCEEEEEEE
T ss_pred             -----CCCC----CCCceEEEEEEcccHHHHHHHHHHcCCcEecCce
Confidence                 1111    36789999995  799999999999999887764

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.13  E-value=4.9e-10  Score=96.93  Aligned_cols=96  Identities=13%  Similarity=0.224  Sum_probs=66.8

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      ....+++|+.|.|+|++++++||+++|||++........+.....|+..++.                 ...+++.... 
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~~-  207 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK-----------------AHDVAFIHHP-  207 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB-----------------SCSEEEEECS-
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC-----------------ceeEEEecCC-
Confidence            4678999999999999999999999999998765432222111234444321                 2234443210 


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                                  +   +.+..|++|.|+   |+++++++|+++|+++..+|.
T Consensus       208 ------------~---~g~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~  244 (307)
T 1mpy_A          208 ------------E---KGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPT  244 (307)
T ss_dssp             ------------S---SSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             ------------C---CCcceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCc
Confidence                        0   123789999999   577788999999999987664

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.12  E-value=2.2e-10  Score=98.77  Aligned_cols=96  Identities=21%  Similarity=0.315  Sum_probs=67.4

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC--------CC-cEEEEEEecCCCCCCCCCCcccceeecCCCc
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--------EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPA  153 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p--------~~-~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~  153 (222)
                      +...+++|+.|.|+|++++++||+++|||++......+        ++ .....|+..++.                 ..
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~-----------------~~  200 (300)
T 2zyq_A          138 TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR-----------------HH  200 (300)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB-----------------SC
T ss_pred             cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC-----------------cc
Confidence            44678999999999999999999999999987543222        11 223445554321                 23


Q ss_pred             EEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHH---HHHHHHhCCCeEEecCC
Q 027489          154 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPD  211 (222)
Q Consensus       154 ~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVda---a~~rL~~~GV~~v~~P~  211 (222)
                      .+++...  .          .    ..|+.|++|.|+|+++   ++++|+++|+++..+|.
T Consensus       201 ~~~~~~~--~----------~----~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~  245 (300)
T 2zyq_A          201 SLAFLPM--P----------T----SSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLG  245 (300)
T ss_dssp             SEEEESS--C----------C----SSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEEEecC--C----------C----CCCceEEEEEeCCHHHHHHHHHHHHHCCCceeeccc
Confidence            4555421  0          0    1377899999999655   69999999999987763

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.12  E-value=3.6e-10  Score=86.84  Aligned_cols=94  Identities=17%  Similarity=0.172  Sum_probs=63.1

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec-----C
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN-----W  161 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~-----~  161 (222)
                      ++.|+.|.|+|++++++||+++|||++..+...  ..+  .++..+                   +..|.|...     .
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~--~~~~~~-------------------~~~l~l~~~~~~~~~   64 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS--PIF--RGLDTG-------------------KSCIGFNAHEAYELM   64 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB--TTE--EEEECS-------------------SSEEEEECTHHHHHT
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCC--Cce--EEeecC-------------------CEEEEEcCccccccc
Confidence            899999999999999999999999998643221  223  233322                   233444321     0


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCC
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ....      . ... ...|. |++|.|+   |+++++++|+++|++++.+|.+
T Consensus        65 ~~~~------~-~~~-~~~~~-~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~  109 (141)
T 2rbb_A           65 QLAQ------F-SET-SGIKF-LLNFDVDTKEAVDKLVPVAIAAGATLIKAPYE  109 (141)
T ss_dssp             TCGG------G-CCC-BSCCE-EEEEECSCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             cccc------c-CCC-CCCeE-EEEEEcCCHHHHHHHHHHHHHcCCeEecCccc
Confidence            1000      0 000 11254 9999999   5999999999999999887754

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.10  E-value=7e-10  Score=99.09  Aligned_cols=107  Identities=10%  Similarity=0.063  Sum_probs=73.5

Q ss_pred             CCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      .....+|+|+.|.|+|++++.+||+++|||++..+..    .. ..|.. ++.                 +..|+|....
T Consensus       148 ~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~----~~-~~~~~-g~~-----------------~~~l~l~~~~  204 (335)
T 3oaj_A          148 DVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG----DF-VRYRS-AGD-----------------IGNVIDLKLT  204 (335)
T ss_dssp             TTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET----TE-EEEEC-SSS-----------------SSCEEEEESS
T ss_pred             hhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC----CE-EEEEe-CCC-----------------CcEEEEEeCC
Confidence            3467899999999999999999999999999987532    22 23322 221                 3456776432


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                      +...      -..|   +.+++|+||.|+|   +++++++|+++|+.+....+.+.++.+||
T Consensus       205 ~~~~------~~~g---~g~~~HiAf~v~d~~~l~~~~~~L~~~G~~~~~~~~r~~~~siYf  257 (335)
T 3oaj_A          205 PIGR------GQMG---AGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYF  257 (335)
T ss_dssp             CCCB------CBCS---BTEEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSSEEEEE
T ss_pred             CCCc------CCCC---CcceEEEEEEcCCHHHHHHHHHHHHHCCCCccccccCCcEEEEEE
Confidence            2110      1111   2468999999998   66799999999998654444455667776

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.10  E-value=5.9e-10  Score=103.08  Aligned_cols=110  Identities=18%  Similarity=0.158  Sum_probs=74.6

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC--CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~--~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      ...++++||.|.|+|+++|++||+++|||++..+.+.+.  ..+..++++.+                   ...|+|...
T Consensus        21 ~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g-------------------~~~l~L~~~   81 (424)
T 1sqd_A           21 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG-------------------DLRFLFTAP   81 (424)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET-------------------TEEEEEEEE
T ss_pred             ccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC-------------------CEEEEEecC
Confidence            346799999999999999999999999999887654321  12344445432                   356777654


Q ss_pred             CCCCC----------CCCCccCCCC------CCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          161 WGTES----------DPDFKGYHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       161 ~g~e~----------d~~~~~y~~g------n~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ..+..          .+. ..|..+      .....|+.|+||.|+|+++++++++++|++++.+|.+
T Consensus        82 ~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~  148 (424)
T 1sqd_A           82 YSPSLSAGEIKPTTTASI-PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIV  148 (424)
T ss_dssp             CCGGGTTTCCGGGCCCSS-TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CCCccccccccccccccc-ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcC
Confidence            21110          000 001000      0001489999999999999999999999999988743

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.10  E-value=1.7e-09  Score=95.44  Aligned_cols=104  Identities=17%  Similarity=0.174  Sum_probs=69.0

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEec-CCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLD-FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~-~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      +..+++|+.|.|+|++++++||+++|||++..+.. .++....+.+++.+++.               .+..|++.....
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~---------------~~~~l~l~~~~~   91 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGS---------------PGTELSFFEIPL   91 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCC---------------TTSEEEEEECTT
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCC---------------CCCEEEEEECCC
Confidence            46789999999999999999999999999887542 11111122233322100               135666654321


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                      ...      ...+   ..+..|++|.|+   |+++++++|+++|+++...+.
T Consensus        92 ~~~------~~~~---~~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~  134 (338)
T 1zsw_A           92 VGR------TYRG---TNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT  134 (338)
T ss_dssp             CCB------CBCC---BSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE
T ss_pred             Ccc------CcCC---CCCeeeEEEEcCCHHHHHHHHHHHHHCCCccccccc
Confidence            110      0111   247889999998   699999999999999876543

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.09  E-value=5.4e-11  Score=91.02  Aligned_cols=95  Identities=22%  Similarity=0.262  Sum_probs=62.4

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEE-----e
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL-----T  158 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL-----~  158 (222)
                      ..++++|+.|.|+|++++++||+++|||++..+.  +  .+ ..| .  .                  +..++.     .
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~-~~~-~--~------------------g~~l~~~~~~~~   58 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--SF-VLF-E--T------------------GFAIHEGRSLEE   58 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--SE-EEE-T--T------------------SCEEEEHHHHHH
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--Cc-EEE-e--c------------------cceeccCchhhh
Confidence            3578899999999999999999999999987642  2  22 122 2  1                  122321     1


Q ss_pred             ecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          159 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       159 ~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ..++.....   ....    ..+..|++|.|+|++++++++++ |++++.+|.+
T Consensus        59 ~~~~~~~~~---~~~~----~~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~  104 (141)
T 2qnt_A           59 TIWRTSSDA---QEAY----GRRNMLLYFEHADVDAAFQDIAP-HVELIHPLER  104 (141)
T ss_dssp             HHHSCCC-----CCCS----CCSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEE
T ss_pred             hccccCCcc---cccc----CCCceEEEEEeCcHHHHHHHHHc-CCccccCCcc
Confidence            111100000   0111    13668999999999999999999 9999887755

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.08  E-value=5.1e-10  Score=100.32  Aligned_cols=107  Identities=16%  Similarity=0.290  Sum_probs=71.5

Q ss_pred             CCceEEEEEEEEeC--CHHHHHHHHHhccCcEEEEEecCCC--CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEe
Q 027489           83 TNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (222)
Q Consensus        83 t~~~~l~Hv~L~V~--DlekSi~FY~~vLGf~l~~~~~~p~--~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~  158 (222)
                      ....+++|+++.|+  |++++++||+++|||++....+.++  .......+....                 ....|+|.
T Consensus       154 ~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~-----------------g~~~i~L~  216 (357)
T 1cjx_A          154 AGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD-----------------GMIRIPLN  216 (357)
T ss_dssp             TSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT-----------------SSCEEEEE
T ss_pred             CCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC-----------------CCEEEEEe
Confidence            35678999999999  9999999999999999887654322  112112222111                 14578887


Q ss_pred             ec-CCCCCC-CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEe-cC
Q 027489          159 HN-WGTESD-PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK-KP  210 (222)
Q Consensus       159 ~~-~g~e~d-~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~-~P  210 (222)
                      .. ...... ..+.....+    .|++||||.|+|+++++++|+++|+++.. .|
T Consensus       217 ~~~~~~~~~~~~~~~~~~g----~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p  267 (357)
T 1cjx_A          217 EESSKGAGQIEEFLMQFNG----EGIQHVAFLTDDLVKTWDALKKIGMRFMTAPP  267 (357)
T ss_dssp             EECTTCCSHHHHHHHHHTS----SBCCEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             eecCCCCChHHHhHHhcCC----CCeeEEEEEcCCHHHHHHHHHHcCCcccCCCC
Confidence            54 111110 000000122    47899999999999999999999999987 55

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.08  E-value=4.4e-10  Score=96.80  Aligned_cols=96  Identities=20%  Similarity=0.306  Sum_probs=67.5

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecC---CCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF---PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~---p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      ....+++|+.|.|+|++++++||+++|||++......   ++......|+..++.                 ...|++..
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~l~l~~  200 (297)
T 1lgt_A          138 TGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNER-----------------HHTLAIAA  200 (297)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEEC
T ss_pred             cCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCC-----------------cceEEEEc
Confidence            3467899999999999999999999999998764322   111123455554321                 23455542


Q ss_pred             cCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHH---HHHHhCCCeEEecCCC
Q 027489          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDG  212 (222)
Q Consensus       160 ~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~---~rL~~~GV~~v~~P~d  212 (222)
                      .  +           +   +.|++|++|.|+|++++.   ++ +++|+++..+|.+
T Consensus       201 ~--~-----------~---~~~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~  239 (297)
T 1lgt_A          201 F--P-----------L---PKRIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGR  239 (297)
T ss_dssp             C--C-----------C---SSSEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEE
T ss_pred             C--C-----------C---CCCceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcc
Confidence            1  0           0   137789999999988776   99 9999999887744

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.08  E-value=1.3e-09  Score=84.25  Aligned_cols=97  Identities=15%  Similarity=0.131  Sum_probs=62.3

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCC
Q 027489           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (222)
Q Consensus        89 ~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~  168 (222)
                      -.+.|.|+|++++++||+++|||++.....  +..+  .++..+                   +..|+|....+...  .
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~~--~~l~~g-------------------~~~l~l~~~~~~~~--~   61 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERP--DEEF--VYLTLD-------------------GVDVMLEGIAGKSR--K   61 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEG--GGTE--EEEEET-------------------TEEEEEEEC--------
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecC--CCCE--EEEEcC-------------------CeEEEEEeccCCCc--c
Confidence            357899999999999999999999875432  2233  344443                   24566664311110  0


Q ss_pred             CccCCCCCCCCCceeEEEEEeCCHHHHHHHHHh-CCCeEEecCC
Q 027489          169 FKGYHNGNSEPRGFGHIGITVDDVYKACERFER-LGVEFAKKPD  211 (222)
Q Consensus       169 ~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~-~GV~~v~~P~  211 (222)
                      +.........+.|+. ++|.|+|+++++++|++ +|+++..+|.
T Consensus        62 ~~~~~~~~~~~~g~~-~~~~v~dvd~~~~~l~~~~G~~~~~~~~  104 (145)
T 2rk9_A           62 WLSGDLEFPLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALE  104 (145)
T ss_dssp             -----CCSSTTTTEE-EEEECSCHHHHHHHHHHHHGGGEEEEEE
T ss_pred             cccCccccCCCCceE-EEEEECCHHHHHHHHHhhCCCeEecCcc
Confidence            000000001123554 99999999999999999 9999987775

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.07  E-value=2.1e-09  Score=97.23  Aligned_cols=94  Identities=19%  Similarity=0.219  Sum_probs=68.2

Q ss_pred             ccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        80 ~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      .|.....++.|+.|.|+|++++++||+++|||++..+.+   .  . +|+...+..               ....|.|..
T Consensus        10 ~P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~---~--~-~~lr~~~~~---------------~~~~l~l~~   68 (365)
T 4ghg_A           10 APAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE---N--Q-IYLRSFEEF---------------IHHNLVLTK   68 (365)
T ss_dssp             SCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S--E-EEEECTTCC---------------SSCSEEEEE
T ss_pred             CCCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC---C--E-EEEEeCCCC---------------cceEEEecc
Confidence            345568999999999999999999999999999987632   1  2 344433210               023355542


Q ss_pred             cCCCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCC
Q 027489          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       160 ~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~  211 (222)
                      .  .               ..|+.|++|.|++   +++++++|+++|+++...+.
T Consensus        69 ~--~---------------~~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~  106 (365)
T 4ghg_A           69 G--P---------------VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKD  106 (365)
T ss_dssp             C--S---------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETT
T ss_pred             C--C---------------CCCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccc
Confidence            1  1               1378999999975   88899999999999987654

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.07  E-value=1.7e-09  Score=96.46  Aligned_cols=101  Identities=16%  Similarity=0.185  Sum_probs=70.9

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++..+....++  ..+++..+                   ...++|+.+..+.
T Consensus         3 i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g-------------------~~~l~l~~~~~~~   61 (357)
T 2r5v_A            3 NFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG-------------------QVTLVLTEPTSDR   61 (357)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET-------------------TEEEEEEEESSTT
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC-------------------CEEEEEeCCCCCC
Confidence            56899999999999999999999999999876433222  22333332                   3567776532211


Q ss_pred             CCC-CCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          165 SDP-DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~-~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      ... .+. ...|    .|+.|++|.|+|+++++++++++|++++.+|.
T Consensus        62 ~~~~~~~-~~~g----~g~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~  104 (357)
T 2r5v_A           62 HPAAAYL-QTHG----DGVADIAMATSDVAAAYEAAVRAGAEAVRAPG  104 (357)
T ss_dssp             SHHHHHH-HHHS----SEEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             CHHHHHH-HhcC----CeEEEEEEEECCHHHHHHHHHHcCCeEeECcE
Confidence            100 000 0012    38899999999999999999999999987773

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.07  E-value=2.2e-10  Score=88.98  Aligned_cols=110  Identities=12%  Similarity=0.079  Sum_probs=63.2

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .-++.||.|.|+|+++|++||+++ |+.......  +.... .+...+                   ...+.+.......
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~l-g~~~~~~~~--~~~~~-~~~~~~-------------------~~~~~~~~~~~~~   63 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGTL-GFEFNPKFT--DESCA-CMVVSE-------------------QAFVMLIDRARFA   63 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHHT-TCEECGGGC--BTTEE-EEEEET-------------------TEEEEEEEHHHHG
T ss_pred             CccEEEEEEEeCCHHHHHHHHHHh-CCCcceeec--CCcee-EEeecC-------------------cceEeeecccccc
Confidence            456889999999999999999885 555443322  22222 222221                   1223332211000


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCC-CCcceEEE
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG-GKAGSIHC  220 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~d-G~m~~laF  220 (222)
                      ...   ..........+..|++|.|+   ||++++++++++|++++.+|.+ |.++.++|
T Consensus        64 ~~~---~~~~~~~~~~~~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f  120 (149)
T 4gym_A           64 DFT---SKPIADATATTEAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSF  120 (149)
T ss_dssp             GGC---SSCBCCTTTCBSCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEE
T ss_pred             ccc---cccCCCCCCCCeeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEE
Confidence            000   00000001124469999996   5888999999999999999865 44555544

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.07  E-value=2.1e-09  Score=95.39  Aligned_cols=102  Identities=22%  Similarity=0.359  Sum_probs=72.3

Q ss_pred             cCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           81 EATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        81 ~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      |..+..+++|+.|.|+|++++++||+++|||++..+.+   .  ..++...++..                ...+.|...
T Consensus         5 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~--~~~l~~~~~~~----------------~~~l~l~~~   63 (339)
T 3lm4_A            5 ARFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q--SVYLRGYEDPY----------------PWSLKITEA   63 (339)
T ss_dssp             GGGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T--EEEEECTTCSS----------------SCSEEEEEC
T ss_pred             CCCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C--EEEEEecCCCC----------------ceEEEEeeC
Confidence            34467899999999999999999999999999987632   1  23343433210                233445421


Q ss_pred             CCCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCC-CCCcceEEE
Q 027489          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD-GGKAGSIHC  220 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~-dG~m~~laF  220 (222)
                      .                 ..|+.|++|.|+|   +++++++|+++|+++...|. .|..+.++|
T Consensus        64 ~-----------------~~g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f  110 (339)
T 3lm4_A           64 P-----------------EAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEY  110 (339)
T ss_dssp             S-----------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEE
T ss_pred             C-----------------CCCcceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEE
Confidence            0                 1278999999998   99999999999999987774 333444544

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.06  E-value=1.2e-09  Score=100.76  Aligned_cols=110  Identities=14%  Similarity=0.100  Sum_probs=75.5

Q ss_pred             CCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCC--cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~--~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      ....++++||.|.|+|++++++||+++|||++..+.+.+.+  ....++++.+                   ...|+|..
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G-------------------~~~l~L~~   86 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-------------------SLSFLFTA   86 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEE
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC-------------------CEEEEEec
Confidence            44568999999999999999999999999998876433221  3444555543                   35688875


Q ss_pred             cCCCCC----CCCCccCCCC------CCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          160 NWGTES----DPDFKGYHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       160 ~~g~e~----d~~~~~y~~g------n~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      ......    .+. ..|..+      .....|+.||||.|+|+++++++++++|++++.+|.
T Consensus        87 ~~~~~~~~~~~p~-~~~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~  147 (418)
T 1sp8_A           87 PYAHGADAATAAL-PSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPV  147 (418)
T ss_dssp             ECCSSCCGGGCSS-TTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCccccccccc-ccccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccc
Confidence            422100    000 000000      000148999999999999999999999999998874

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.05  E-value=4.5e-10  Score=96.48  Aligned_cols=95  Identities=19%  Similarity=0.238  Sum_probs=65.8

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC--CC-cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p--~~-~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      +...+++|+.|.|+|++++++||+++|||++......+  ++ .....|+..++.                 ...+.+..
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~  200 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR-----------------HHTIALAA  200 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEEC
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC-----------------cceEEEec
Confidence            45678999999999999999999999999987543321  11 123345554321                 22355542


Q ss_pred             cCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHH---HHHHHHhCCCeEEecCC
Q 027489          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPD  211 (222)
Q Consensus       160 ~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVda---a~~rL~~~GV~~v~~P~  211 (222)
                      ..             +   +.+++|++|.|+|+++   ++++|+ +|+++...|.
T Consensus       201 ~~-------------~---~~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~  238 (292)
T 1kw3_B          201 FP-------------I---PKRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLG  238 (292)
T ss_dssp             CS-------------C---SSSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSE
T ss_pred             CC-------------C---CCceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCc
Confidence            10             0   1377899999998655   678999 9999887763

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.05  E-value=2.1e-09  Score=93.29  Aligned_cols=90  Identities=17%  Similarity=0.260  Sum_probs=65.5

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEec-CCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY-EDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~-~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      +..+++|+.|.|+|++++++||+++|||++..+.+  +. .  .++.. ++.                .+..|.|...  
T Consensus         5 ~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~-~--~~l~~~~~~----------------~~~~l~l~~~--   61 (309)
T 3hpy_A            5 GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG-R--VYFKCWDER----------------DHSCYIIREA--   61 (309)
T ss_dssp             SEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS-C--EEEECTTCC----------------BSCSEEEEEC--
T ss_pred             ccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC-e--EEEEeccCC----------------CceEEEEEeC--
Confidence            35789999999999999999999999999987632  11 1  23332 221                0134445321  


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~  211 (222)
                      .               ..++.|++|.|+|   +++++++|+++|+++...|.
T Consensus        62 ~---------------~~~~~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~   98 (309)
T 3hpy_A           62 D---------------TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPA   98 (309)
T ss_dssp             S---------------SCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECT
T ss_pred             C---------------CCceeEEEEEECCHHHHHHHHHHHHhCCCceeeccC
Confidence            0               0267899999987   99999999999999987765

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.04  E-value=2.4e-09  Score=94.05  Aligned_cols=93  Identities=18%  Similarity=0.239  Sum_probs=68.6

Q ss_pred             cCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           81 EATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        81 ~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      |..+..++.|+.|.|+|++++++||+++|||++..+.   + + ..++...++.                ....|.|...
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~---~-~-~~~l~~~~~~----------------~~~~l~l~~~   69 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED---E-N-TIYLRSLEEF----------------IHHNLVLRQG   69 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC---S-S-EEEEECTTCC----------------SSCSEEEEEC
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeec---C-C-EEEEEecCCC----------------CcEEEEEEEC
Confidence            4556889999999999999999999999999987653   1 1 2233222221                0234555431


Q ss_pred             CCCCCCCCCccCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEecCC
Q 027489          161 WGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       161 ~g~e~d~~~~~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .                 ..++.|++|.|   +|+++++++|+++|+++...|.
T Consensus        70 ~-----------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~  106 (323)
T 1f1u_A           70 P-----------------IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKE  106 (323)
T ss_dssp             S-----------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETT
T ss_pred             C-----------------CCCeeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccc
Confidence            0                 02678999999   7899999999999999988776

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.04  E-value=8.3e-10  Score=95.48  Aligned_cols=91  Identities=18%  Similarity=0.248  Sum_probs=65.3

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +.++++|+.|.|+|++++++||+++|||++....+  .+.   +++..++.                 ...++|....+.
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~~---~~l~~~~~-----------------~~~~~l~~~~~~   61 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR---VYLKAWTE-----------------VDKFSLVLREAD   61 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSC---EEEECTTC-----------------CBSCSEEEEECS
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CCc---EEEEecCC-----------------CCceEEEEccCC
Confidence            36789999999999999999999999999987532  121   34443221                 011222211110


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEecCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~~P~  211 (222)
                                     ..+..|++|.|   +|+++++++++++|+++...|.
T Consensus        62 ---------------~~~~~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~   97 (307)
T 1mpy_A           62 ---------------EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPA   97 (307)
T ss_dssp             ---------------SCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECT
T ss_pred             ---------------CCCcceEEEEeCCHHHHHHHHHHHHHcCCceecCCc
Confidence                           02678999999   8999999999999999988774

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.04  E-value=2e-09  Score=86.62  Aligned_cols=107  Identities=11%  Similarity=0.054  Sum_probs=63.9

Q ss_pred             ccCCCceEEEEEEEEeCC--HHHHHHHHHhccCcEEEEEecCC-------CCcEEEEEEecCCCCCCCCCCcccceeecC
Q 027489           80 DEATNGYFMQQTMFRIKD--PKVSLDFYSRVLGMSLLKRLDFP-------EMKFSLYFLGYEDTASAPADPVDRTVWTFG  150 (222)
Q Consensus        80 ~~~t~~~~l~Hv~L~V~D--lekSi~FY~~vLGf~l~~~~~~p-------~~~~~l~flg~~~~~~~p~d~~~~~~w~~~  150 (222)
                      .+....+.-.++.|.|+|  +++|++||+++||+++.....++       ++.+....+..+                  
T Consensus        17 ~~~~~~~~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~------------------   78 (166)
T 1xy7_A           17 VETHLVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA------------------   78 (166)
T ss_dssp             ---CCCEEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET------------------
T ss_pred             ccCCCCCceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC------------------
Confidence            445556777889999999  99999999999999987543211       111111222221                  


Q ss_pred             CCcEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCC
Q 027489          151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG  213 (222)
Q Consensus       151 ~~~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG  213 (222)
                       +..|.+........   . +...+.  ..+ .|++|.|+|+++++++|+++|++ +.+|.+.
T Consensus        79 -g~~l~l~~~~~~~~---~-~~~~~~--~~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~  132 (166)
T 1xy7_A           79 -GSSFVVCDVSSLPG---F-STAKSE--GSG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEA  132 (166)
T ss_dssp             -TEEEEEEEGGGSTT---C-CCCCTT--SCC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHH
T ss_pred             -CeEEEEeCCCcccC---C-ccccCC--CCc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccc
Confidence             34455543211000   0 010100  123 38999999999999999999999 8888654

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.03  E-value=1.4e-09  Score=95.13  Aligned_cols=89  Identities=15%  Similarity=0.269  Sum_probs=66.9

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      ....+++|+.|.|+|++++++||+++|||++.....  + .  ..|+..++.                 ...|.+...  
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~-~--~~fl~~~~~-----------------~~~l~l~~~--  192 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D-F--MCFLRCNSA-----------------HHRIAILPG--  192 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T-T--EEEEESSSB-----------------SCSEEEEES--
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C-e--EEEEecCCC-----------------cceEEEECC--
Confidence            467899999999999999999999999999876542  1 1  245554321                 234555421  


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCCHHHH---HHHHHhCCCeEEecCC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA---CERFERLGVEFAKKPD  211 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa---~~rL~~~GV~~v~~P~  211 (222)
                                .      .|++|++|.|+|++++   +++|+++|+++...|.
T Consensus       193 ----------~------~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~  228 (310)
T 3b59_A          193 ----------P------PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPG  228 (310)
T ss_dssp             ----------S------SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEE
T ss_pred             ----------C------CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCc
Confidence                      0      2789999999997776   9999999999877663

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.02  E-value=5.2e-10  Score=97.03  Aligned_cols=95  Identities=15%  Similarity=0.224  Sum_probs=64.7

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC--CC-cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p--~~-~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      +...+++|+.|.|+|++++++|| ++|||++......+  ++ .....|+..++.                 ...+.+..
T Consensus       145 ~~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~  206 (302)
T 2ehz_A          145 TGDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR-----------------DHSIAFGA  206 (302)
T ss_dssp             CGGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB-----------------SCSEEECS
T ss_pred             cCCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC-----------------CcEEEEec
Confidence            45679999999999999999999 99999986433211  22 223445544321                 12233421


Q ss_pred             cCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHH---HHHHHHhCCCeEEecCC
Q 027489          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPD  211 (222)
Q Consensus       160 ~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVda---a~~rL~~~GV~~v~~P~  211 (222)
                      .  .              .+.+++|++|.|+|+++   ++++|+++|+++..+|.
T Consensus       207 ~--~--------------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~  245 (302)
T 2ehz_A          207 M--P--------------AAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLG  245 (302)
T ss_dssp             C--C--------------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             C--C--------------CCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCc
Confidence            0  0              01377899999998764   67899999999987763

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.02  E-value=5.1e-10  Score=97.05  Aligned_cols=94  Identities=16%  Similarity=0.215  Sum_probs=64.3

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC--CC-cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p--~~-~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      +...+++|+.|.|+|++++++|| ++|||++......+  ++ .....|+..++.                 ...+.+..
T Consensus       142 ~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~  203 (305)
T 2wl9_A          142 TEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR-----------------HHSLAFGV  203 (305)
T ss_dssp             CTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS-----------------SCSEEECC
T ss_pred             cCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC-----------------ceEEEEec
Confidence            45678999999999999999999 99999986532221  11 122334443221                 12344421


Q ss_pred             cCCCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecC
Q 027489          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKP  210 (222)
Q Consensus       160 ~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P  210 (222)
                      .  .           +   ..+++|++|.|+|   +++++++|+++|+++...|
T Consensus       204 ~--~-----------~---~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p  241 (305)
T 2wl9_A          204 G--P-----------M---DKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQI  241 (305)
T ss_dssp             S--C-----------C---SSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             C--C-----------C---CCCceEEEEEcCCHHHHHHHHHHHHHcCCCccccC
Confidence            1  0           0   1378999999998   6678899999999998766

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.00  E-value=2.1e-09  Score=92.56  Aligned_cols=87  Identities=11%  Similarity=0.182  Sum_probs=64.5

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++....+  +   . .++..++.                 ...|.+...  . 
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~---~-~~~~~~~~-----------------~~~l~~~~~--~-   55 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N---G-DLFRIDSR-----------------AWRIAVQQG--E-   55 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T---E-EEEESSSB-----------------SCSEEEEEC--T-
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C---e-EEEEeCCC-----------------cEEEEEecC--C-
Confidence            4689999999999999999999999999987532  2   1 34444321                 122333211  0 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                                    ..++.|++|.|+   |+++++++|+++|+++...|.
T Consensus        56 --------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~   91 (297)
T 1lgt_A           56 --------------VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDA   91 (297)
T ss_dssp             --------------TCEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCH
T ss_pred             --------------CCCccEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCc
Confidence                          126789999999   999999999999999887664

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.95  E-value=4.9e-09  Score=96.31  Aligned_cols=106  Identities=13%  Similarity=0.195  Sum_probs=74.8

Q ss_pred             CCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCC-c-EEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-K-FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~-~-~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      ....++++|+.|.|+|++++++||+++|||++....+.+.+ . ...+++..+                   ...++|..
T Consensus         6 ~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G-------------------~i~~~L~~   66 (393)
T 3isq_A            6 RGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG-------------------KIVFVLSS   66 (393)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEE
T ss_pred             CCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC-------------------CEEEEEec
Confidence            44578999999999999999999999999999875443212 1 123344432                   46778875


Q ss_pred             cCCCCCCCCCccC--CCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          160 NWGTESDPDFKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       160 ~~g~e~d~~~~~y--~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      ...+.+.+ ...+  ..|    .|..|+||.|+|+++++++++++|++++.+|.
T Consensus        67 p~~p~s~~-~a~fl~~hG----~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~  115 (393)
T 3isq_A           67 ALNPWNKE-MGDHLVKHG----DGVKDIAFEVEDCDYIVQKARERGAKIMREPW  115 (393)
T ss_dssp             ESSTTCHH-HHHHHHHHC----SEEEEEEEEEECHHHHHHHHHHHTCCEEEEEE
T ss_pred             CCCCCchH-HHHHHHhcC----CcEEEEEEEeCCHHHHHHHHHHCCCeEecCcc
Confidence            32221100 0001  012    38899999999999999999999999998884

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=98.95  E-value=3.5e-09  Score=90.89  Aligned_cols=87  Identities=15%  Similarity=0.250  Sum_probs=63.9

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++..+.+  +   . .++..++.                 ...+.+..  +. 
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~---~-~~l~~~~~-----------------~~~l~~~~--~~-   55 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D---A-ALYRADQR-----------------AWRIAVQP--GE-   55 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T---E-EEEESSSB-----------------SCSEEEEE--CT-
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C---e-EEEEcCCc-----------------eEEEEEcc--CC-
Confidence            4689999999999999999999999999987532  1   1 23443321                 11233321  10 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                                    ..++.|++|.|+   |+++++++|+++|+++...|.
T Consensus        56 --------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~   91 (292)
T 1kw3_B           56 --------------LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDE   91 (292)
T ss_dssp             --------------TCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCH
T ss_pred             --------------CCCccEEEEEECCHHHHHHHHHHHHHcCCeEeecCc
Confidence                          126789999998   899999999999999987764

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=98.94  E-value=5.1e-09  Score=90.76  Aligned_cols=93  Identities=16%  Similarity=0.175  Sum_probs=62.1

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      ..+.|+.|.|+|++++++||+++|||++......+...+  .++..++                  .....+...  . .
T Consensus       163 ~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~--~~~~~~~------------------~~~~~~~~~--~-~  219 (282)
T 3oxh_A          163 GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNY--RVLKAGD------------------AEVGGCMEP--P-M  219 (282)
T ss_dssp             TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------C--EEEEETT------------------EEEEEEECC--S-S
T ss_pred             CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcce--EEEEcCC------------------ccEeeecCC--C-C
Confidence            478999999999999999999999999875421122223  2333322                  112222211  0 0


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                       +     .     ..+..|++|.|+|+++++++++++|++++.+|.+
T Consensus       220 -~-----~-----~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~  255 (282)
T 3oxh_A          220 -P-----G-----VPNHWHVYFAVDDADATAAKAAAAGGQVIAEPAD  255 (282)
T ss_dssp             -T-----T-----CCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEE
T ss_pred             -C-----C-----CCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeE
Confidence             0     0     0245699999999999999999999999888755

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=98.92  E-value=4.1e-09  Score=90.78  Aligned_cols=87  Identities=16%  Similarity=0.151  Sum_probs=63.4

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEE-EecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLK-RLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~-~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ..+++|+.|.|+|++++++||+++|||++.. +.   +. .  .++..++.                 ...|.|...  .
T Consensus         3 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~-~--~~~~~~~~-----------------~~~l~l~~~--~   57 (300)
T 2zyq_A            3 IRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EG-A--LYLRMDDF-----------------PARLVVVPG--E   57 (300)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SS-C--EEEESSSS-----------------SCSEEEEEC--S
T ss_pred             cceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CC-e--EEEEeCCC-----------------cEEEEEecC--C
Confidence            5689999999999999999999999999865 31   11 1  23444321                 123444321  0


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~  211 (222)
                                     ..++.|++|.|+|   +++++++|+++|+++...|.
T Consensus        58 ---------------~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~   93 (300)
T 2zyq_A           58 ---------------HDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATA   93 (300)
T ss_dssp             ---------------SCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCH
T ss_pred             ---------------CCCcceEEEEeCCHHHHHHHHHHHHHcCCeEEeCCh
Confidence                           1267899999975   89999999999999887664

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=98.91  E-value=1.1e-08  Score=90.25  Aligned_cols=98  Identities=12%  Similarity=0.071  Sum_probs=65.1

Q ss_pred             CCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      .....+++|++|.|+|++++++||+++|||++....+    .+ ..|...+++.               ....+.+..  
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~-~~~~~~~~g~---------------~~~~~~~~~--  232 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QE-AIFQSIKGEA---------------FGEIVVKYL--  232 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SE-EEEESSTTCS---------------TTCEEEEEC--
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----Ce-EEEEecCCCC---------------ceEEEEecc--
Confidence            3457899999999999999999999999999987532    23 2232211100               012333322  


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                      +...      ...+   ..++.|++|.|+   |+++++++|+++|+++. +|.
T Consensus       233 ~~~~------~~~~---~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~  275 (338)
T 1zsw_A          233 DGPT------EKPG---RGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GII  275 (338)
T ss_dssp             CSSB------CBCC---BTCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCE
T ss_pred             CCCC------CCCC---CCceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eee
Confidence            1110      0111   136789999999   69999999999999985 453

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=98.90  E-value=4.8e-09  Score=81.41  Aligned_cols=99  Identities=15%  Similarity=0.190  Sum_probs=60.3

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEE-ecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR-LDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~-~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      .+++.|+.|.|+|++++++||+++|||++... ...++  +.+ | +                      ..|+|. ....
T Consensus        19 ~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~--~~~-~-g----------------------~~l~l~-~~~~   71 (148)
T 3bt3_A           19 VVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG--FGD-Y-G----------------------CVFDYP-SEVA   71 (148)
T ss_dssp             EEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS--CEE-E-E----------------------EEESSC-TTTT
T ss_pred             eEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC--ccE-E-c----------------------cEEEEe-ccCC
Confidence            67899999999999999999999999998642 22222  222 2 2                      113331 0111


Q ss_pred             CCCCC-CccCC--CCCCCCCceeEEEE-EeCCHHHHHHHHHhCCCeEEecCCCC
Q 027489          164 ESDPD-FKGYH--NGNSEPRGFGHIGI-TVDDVYKACERFERLGVEFAKKPDGG  213 (222)
Q Consensus       164 e~d~~-~~~y~--~gn~~p~G~~HIaf-~VdDVdaa~~rL~~~GV~~v~~P~dG  213 (222)
                      ...+. ....+  .|.   .+.++.+| .|+|+++++++++++|++++.+|.+.
T Consensus        72 ~~~~~~~~~~~~~~g~---~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~  122 (148)
T 3bt3_A           72 VAHLTPFRGFHLFKGE---PIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQ  122 (148)
T ss_dssp             SCC--CCCSEEEEESC---CCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEE
T ss_pred             Ccccccccccceeecc---CCCccEEEEEcCCHHHHHHHHHHcCCccccCcccC
Confidence            00000 00000  010   01123365 99999999999999999998887543

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=98.88  E-value=5.9e-09  Score=90.29  Aligned_cols=88  Identities=15%  Similarity=0.232  Sum_probs=64.8

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++....  .+ +.  .++..++.                 +..|+|...  . 
T Consensus         4 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~-~~--~~~~~~~~-----------------~~~l~l~~~--~-   58 (305)
T 2wl9_A            4 VTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--ED-DR--IYLRMDRW-----------------HHRIVLHAD--G-   58 (305)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHTTTTCCEEECCS--CT-TE--EEEECSSB-----------------SCSEEEECS--S-
T ss_pred             cceeeEEEEEeCCHHHHHHHHHhccCCEEeecc--CC-Ce--EEEEeCCC-----------------eEEEEEEEC--C-
Confidence            468999999999999999999999999987521  12 22  23444321                 234666421  0 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                                    ..++.|++|.|+   |+++++++|+++|+++...|.
T Consensus        59 --------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~   94 (305)
T 2wl9_A           59 --------------SDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASD   94 (305)
T ss_dssp             --------------CCEEEEEEEECSSHHHHHHHHHHHHHTTCCCEECCH
T ss_pred             --------------CCCeEEEEEEECCHHHHHHHHHHHHHCCCceEeCCc
Confidence                          126789999997   699999999999999987764

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=98.88  E-value=6.5e-09  Score=90.03  Aligned_cols=89  Identities=16%  Similarity=0.190  Sum_probs=64.2

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..+++|+.|.|+|++++++||+++|||++..+.  ++. .  .|+..++.                 ...|.|...  .
T Consensus         6 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~~-~--~~~~~~~~-----------------~~~l~l~~~--~   61 (302)
T 2ehz_A            6 AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEG--EKD-R--FYLRMDYW-----------------HHRIVVHHN--G   61 (302)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCS--CSS-E--EEEESSSB-----------------SCSEEEESS--C
T ss_pred             cccEeeEEEEEeCCHHHHHHHHHhcCCCEEEecc--CCc-c--eEEEeCCC-----------------ceEEEEecC--C
Confidence            4678999999999999999999999999987542  111 1  23333221                 233555321  0


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                                     ..++.|++|.|+   |+++++++|+++|+++...|.
T Consensus        62 ---------------~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~   97 (302)
T 2ehz_A           62 ---------------QDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDK   97 (302)
T ss_dssp             ---------------CSEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCH
T ss_pred             ---------------CCCeeEEEEEECCHHHHHHHHHHHHHCCCcEEECCc
Confidence                           126789999995   699999999999999887764

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=98.87  E-value=9.2e-09  Score=89.13  Aligned_cols=94  Identities=15%  Similarity=0.093  Sum_probs=63.0

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCC--cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~--~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .+.|+.|.|+|++++++||+++|||++..... +.+  .+..  +..++                  .....+....+..
T Consensus        32 ~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~-~~~~~~~~~--~~~~g------------------~~~~~l~~~~~~~   90 (282)
T 3oxh_A           32 TPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPV-PGGGGVYSM--ATLNG------------------EAVAAIAPMPPGA   90 (282)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEE--EEETT------------------EEEEEEEECCSCC
T ss_pred             CcEEEEEecCCHHHHHHHHHHhcCcEEeecCC-CCCccCEEE--EEeCC------------------eeeEeeccCCCCC
Confidence            58999999999999999999999999876532 112  2432  22221                  1233443321110


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                        +    ..     ..+..|++|.|+|+++++++++++|+++..+|.+
T Consensus        91 --~----~~-----~~~~~~~~~~v~d~d~~~~~l~~~G~~~~~~p~~  127 (282)
T 3oxh_A           91 --P----EG-----MPPIWNTYIAVDDVDAVVDKVVPGGGQVMMPAFD  127 (282)
T ss_dssp             --------------CCCEEEEEEECSCHHHHHTTTTTTTCEEEEEEEE
T ss_pred             --C----CC-----CCCcEEEEEEeCCHHHHHHHHHHCCCEEEECCEe
Confidence              0    00     0234689999999999999999999999877754

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=98.82  E-value=1.9e-08  Score=87.94  Aligned_cols=91  Identities=15%  Similarity=0.206  Sum_probs=66.3

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      .+..++.|+.|.|+|++++++||+++|||++....  +  +.  .++..++..               ....|.|.... 
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~--~--~~--~~l~~~~~~---------------~~~~l~l~~~~-   61 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGED--A--NN--AWFKAQGAD---------------EHHVVQLRRAD-   61 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEC--S--SE--EEEECTTSC---------------CSCSEEEEECS-
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeec--C--Ce--EEEEECCCC---------------CCEEEEEEECC-
Confidence            35678999999999999999999999999987653  1  22  234433200               02445564310 


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEe---CCHHHHHHHHHhCCCeEEecCC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~V---dDVdaa~~rL~~~GV~~v~~P~  211 (222)
                                      ..++.|++|.|   +|+++++++++++|+++...|.
T Consensus        62 ----------------~~~~~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~   97 (310)
T 3b59_A           62 ----------------ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPA   97 (310)
T ss_dssp             ----------------SCEEEEEEEEESSHHHHHHHHHHHHHHTCCBCCCSE
T ss_pred             ----------------CCCeeEEEEEeCCHHHHHHHHHHHHhCCCeEeecCc
Confidence                            02678999999   7899999999999999887664

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=98.82  E-value=1.5e-08  Score=87.49  Aligned_cols=83  Identities=14%  Similarity=0.204  Sum_probs=62.2

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+++|+.|.|+|++++++||+++|||++..+.+    .+  +++..+                   ...|.|....+  
T Consensus        24 ~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~~--~~L~~g-------------------~~~l~l~~~~~--   76 (252)
T 3pkv_A           24 MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----DA--FTIQLG-------------------VSQIQFRAAAD--   76 (252)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----SE--EEEEET-------------------TEEEEEEECCT--
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----CE--EEEEeC-------------------CEEEEEEECCC--
Confidence            6789999999999999999999999999877532    12  445543                   24566654211  


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEe
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAK  208 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~  208 (222)
                               .+    .+..|++|.|+  |+++++++|+++ +++..
T Consensus        77 ---------~~----~~~~hiaf~V~~~dld~~~~rL~~~-v~~~~  108 (252)
T 3pkv_A           77 ---------GT----KPFYHIAINIAANHFQEGKAWLSGF-GELLT  108 (252)
T ss_dssp             ---------TC----CCCCEEEEEECTTCHHHHHHHHTTS-SCCCC
T ss_pred             ---------CC----CCeeEEEEEecHHHHHHHHHHHHhc-ceEec
Confidence                     01    25689999985  699999999999 99866

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.72  E-value=3.4e-07  Score=72.02  Aligned_cols=99  Identities=15%  Similarity=0.128  Sum_probs=61.4

Q ss_pred             eEEEEEEEEeC-CHHHHHHHHHhccCcEEEEEecCCCC------------cEEEEEEecCCCCCCCCCCcccceeecCCC
Q 027489           86 YFMQQTMFRIK-DPKVSLDFYSRVLGMSLLKRLDFPEM------------KFSLYFLGYEDTASAPADPVDRTVWTFGKP  152 (222)
Q Consensus        86 ~~l~Hv~L~V~-DlekSi~FY~~vLGf~l~~~~~~p~~------------~~~l~flg~~~~~~~p~d~~~~~~w~~~~~  152 (222)
                      +++ +..|.|. |+++|++||+++||+++.....+++.            .....-+..+                   +
T Consensus         3 m~~-~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~-------------------~   62 (149)
T 1u6l_A            3 LQI-VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG-------------------S   62 (149)
T ss_dssp             CEE-EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET-------------------T
T ss_pred             ceE-EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC-------------------C
Confidence            443 4789999 99999999999999998865443321            1111111211                   2


Q ss_pred             cEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCCCcc
Q 027489          153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKAG  216 (222)
Q Consensus       153 ~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG~m~  216 (222)
                      ..|.+... ..+.  .   ..    ...| .+++|.|+|   +++++++|+ .|++++.+|.+....
T Consensus        63 ~~l~~~d~-~~~~--~---~~----~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG  117 (149)
T 1u6l_A           63 FALMASDN-HPAY--P---YE----GIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWA  117 (149)
T ss_dssp             EEEEEEEC-CTTS--C---CC----CCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTE
T ss_pred             EEEEEEcC-CCcc--C---CC----CCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcc
Confidence            33433321 1100  0   00    0124 489999999   889999985 899999988775443

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=98.67  E-value=4e-07  Score=82.25  Aligned_cols=96  Identities=13%  Similarity=0.162  Sum_probs=68.1

Q ss_pred             ccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        80 ~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      .+.....++.|+.|.|+|++++.+||++ |||.+......+++.....|+..++.                 ...+.+..
T Consensus       145 ~~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~-----------------hH~la~~~  206 (365)
T 4ghg_A          145 YSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT-----------------VHDTALTG  206 (365)
T ss_dssp             CCTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS-----------------SCSEEEEE
T ss_pred             cccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc-----------------ccceeeec
Confidence            3445678999999999999999999965 99998876665555555677765431                 23344432


Q ss_pred             cCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHH---HHHHHHhCCCe--EEecC
Q 027489          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVE--FAKKP  210 (222)
Q Consensus       160 ~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVda---a~~rL~~~GV~--~v~~P  210 (222)
                      .  .               ..+++|++|.|+|+++   ++++|.++|+.  +...|
T Consensus       207 ~--~---------------~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~Gp  245 (365)
T 4ghg_A          207 G--N---------------GPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGP  245 (365)
T ss_dssp             S--S---------------BSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred             C--C---------------CCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCC
Confidence            1  0               1379999999998766   57889999984  44444

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.65  E-value=8.4e-07  Score=68.40  Aligned_cols=98  Identities=5%  Similarity=0.075  Sum_probs=61.3

Q ss_pred             EEEEEEEEeC--CHHHHHHHHHhcc-CcEEEEEecCCC------CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEE
Q 027489           87 FMQQTMFRIK--DPKVSLDFYSRVL-GMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (222)
Q Consensus        87 ~l~Hv~L~V~--DlekSi~FY~~vL-Gf~l~~~~~~p~------~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL  157 (222)
                      ++. ..|.|.  |+++|++||+++| |+++.....+++      +.+...-+..+                   +..+.+
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~-------------------g~~~~~   65 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG-------------------DQSVHC   65 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEE
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEEC-------------------CEEEEE
Confidence            344 668887  9999999999999 999875433322      22222222222                   223333


Q ss_pred             eecCCCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCCCcc
Q 027489          158 THNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKAG  216 (222)
Q Consensus       158 ~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG~m~  216 (222)
                      .... ..  +.   ...+    .+ ..++|.|+|   +++++++++ +|++++.+|.+....
T Consensus        66 ~~~~-~~--~~---~~~~----~~-~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G  115 (136)
T 1u7i_A           66 IDSH-VR--HA---FDFT----PA-FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFS  115 (136)
T ss_dssp             EEES-SC--CS---CCCC----TT-EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSS
T ss_pred             ECCC-CC--CC---CCCC----Cc-eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCc
Confidence            2211 00  10   1111    23 479999999   999999999 999999999875543

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.65  E-value=1.4e-07  Score=84.36  Aligned_cols=98  Identities=13%  Similarity=0.130  Sum_probs=67.6

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ...+++|+.+.|+|++++.+|| ++|||++..+..  ...+  +++..+                   ...+.|....+.
T Consensus         9 ~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~--~~~~--~l~~~g-------------------~~~l~l~~~~~~   64 (357)
T 1cjx_A            9 GLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHR--SKNV--HLYRQG-------------------EINLILNNEPNS   64 (357)
T ss_dssp             CEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEES--SSSE--EEEEET-------------------TEEEEEECCSSS
T ss_pred             ccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeC--CeeE--EEEecC-------------------CEEEEEECCCCc
Confidence            4789999999999999999999 899999987643  2222  233322                   244555432111


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .. ..+. ...|    .++.|+||.|+|+++++++++++|+++...|.
T Consensus        65 ~~-~~~~-~~~g----~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~  106 (357)
T 1cjx_A           65 IA-SYFA-AEHG----PSVCGMAFRVKDSQKAYNRALELGAQPIHIDT  106 (357)
T ss_dssp             HH-HHHH-HHHS----SEEEEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             hh-hhhh-hhcC----CeEEEEEEEeCCHHHHHHHHHHcCCEEeecCC
Confidence            00 0000 0112    38899999999999999999999999987774

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=98.65  E-value=3.2e-07  Score=77.86  Aligned_cols=98  Identities=12%  Similarity=0.032  Sum_probs=64.0

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .....++.+.|.|+++|++||+++|||++......+ +.+  .++..++..               ....+.+....+  
T Consensus       181 ~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~--~~~~~~~~~---------------~~~~~~~~~~~~--  240 (301)
T 2zw5_A          181 TTLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PEF--AEAALTPWS---------------AGPRFRLAAVPG--  240 (301)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EEE--EEEESSSSS---------------SSSEEEEEECCC--
T ss_pred             ccceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-ccE--EEEEcCCCc---------------cccccccccCCC--
Confidence            445568889999999999999999999987544322 223  234443210               012233321110  


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC-CHHHHHHHHHhCCCeEEecCCCCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDGGK  214 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd-DVdaa~~rL~~~GV~~v~~P~dG~  214 (222)
                             .. +    .+..+++|.|+ |+++++++++++|++++.+|.+..
T Consensus       241 -------~~-~----~~~~~~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~  279 (301)
T 2zw5_A          241 -------PG-P----VEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRP  279 (301)
T ss_dssp             -------SS-C----CCCCEEEEEEESCHHHHHHHHHHTTCCEEEEEEECT
T ss_pred             -------cC-C----CCceEEEEEcCccHHHHHHHHHHcCCccccCcccCC
Confidence                   00 1    12358999999 999999999999999998886543

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.18  E-value=2.8e-05  Score=63.64  Aligned_cols=96  Identities=17%  Similarity=0.146  Sum_probs=61.1

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC--------------CcEEEEEEecCCCCCCCCCCcccceeecCCCcE
Q 027489           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT  154 (222)
Q Consensus        89 ~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~--------------~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~  154 (222)
                      -...|.+.|.++|++||+++||+++.....+.+              +...++-+..+                   +..
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~-------------------g~~   87 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL-------------------GVK   87 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET-------------------TEE
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC-------------------CEE
Confidence            345677889999999999999999876654421              22223333322                   344


Q ss_pred             EEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEe--------CCHHHHHHHHHhCC-CeEEecCCCCCc
Q 027489          155 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--------DDVYKACERFERLG-VEFAKKPDGGKA  215 (222)
Q Consensus       155 IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~V--------dDVdaa~~rL~~~G-V~~v~~P~dG~m  215 (222)
                      |.+....+..       +..+    .+ ..+++.|        +|+++++++|.+.| ++++.+|.+...
T Consensus        88 lm~~D~~g~~-------~~~~----~~-~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~w  145 (172)
T 3l20_A           88 VLCSDSFGRA-------DKIN----NG-ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFW  145 (172)
T ss_dssp             EEEEECTTCC-------CCCC----SS-EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTT
T ss_pred             EEEECCCCCC-------CCCC----Cc-EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCC
Confidence            5454322211       1111    13 3466766        58999999999999 799998876443

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=98.18  E-value=2.1e-05  Score=61.70  Aligned_cols=94  Identities=5%  Similarity=0.079  Sum_probs=58.1

Q ss_pred             EEEEeC-CHHHHHHHHHhccC-cEEEEEecCC------CCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           91 TMFRIK-DPKVSLDFYSRVLG-MSLLKRLDFP------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        91 v~L~V~-DlekSi~FY~~vLG-f~l~~~~~~p------~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      ..|.+. |.+++++||+++|| .++.....++      ++...+..+..+                   +..|.+....+
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~-------------------g~~lm~~d~~~   73 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN-------------------GQEFMCIDSYV   73 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEEECSS
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC-------------------CEEEEEEcCCC
Confidence            356777 89999999999999 5765443332      223333333332                   24444442111


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCCCc
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKA  215 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG~m  215 (222)
                       +  ..   +..+    .+ .+++|.|+|   +++++++|. .|.+++.+|.+-..
T Consensus        74 -~--~~---~~~~----~~-~~l~l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~w  117 (138)
T 3oms_A           74 -N--HN---FTFT----PA-MSLYVTCETEEEIDTVFHKLA-QDGAILMPLGSYPF  117 (138)
T ss_dssp             -C--CS---CCCC----TT-SCEEEEESSHHHHHHHHHHHH-TTCEEEEEEEEETT
T ss_pred             -C--CC---CCCC----CC-EEEEEEcCCHHHHHHHHHHHH-cCCeEecCcccccC
Confidence             1  00   1111    13 368999999   999999995 68899988876443

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=98.11  E-value=2.8e-05  Score=60.94  Aligned_cols=95  Identities=5%  Similarity=0.007  Sum_probs=56.5

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhcc-CcEEEEEecCCC------CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEe
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVL-GMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vL-Gf~l~~~~~~p~------~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~  158 (222)
                      +++...-+.+.|.++|++||+++| |+++.....+++      +...+.-+..+                   +..+-+.
T Consensus         4 ~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~-------------------~~~~m~~   64 (139)
T 1tsj_A            4 PKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN-------------------GQVFMAI   64 (139)
T ss_dssp             CSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET-------------------TEEEEEE
T ss_pred             CceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEEC-------------------CEEEEEE
Confidence            345555555569999999999999 999876543332      12222222221                   1222221


Q ss_pred             ecCCCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCCCc
Q 027489          159 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKA  215 (222)
Q Consensus       159 ~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG~m  215 (222)
                       +.+++       .  +    .. ..+++.|+|   +++++++|. .|++++.+|.+...
T Consensus        65 -d~~~~-------~--~----~~-~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~w  108 (139)
T 1tsj_A           65 -DANSG-------T--E----LP-ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPP  108 (139)
T ss_dssp             -C--------------------C-CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETT
T ss_pred             -CCCCC-------C--C----ce-EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCC
Confidence             11100       0  0    12 368899987   788899998 79999998876443

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.44  E-value=0.0016  Score=56.06  Aligned_cols=43  Identities=23%  Similarity=0.329  Sum_probs=34.2

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE  132 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~  132 (222)
                      ..+.+.+..|+|+|.++.++||+++|||+++.+..      ..+.+|.+
T Consensus         7 ~~~~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~   49 (244)
T 3e0r_A            7 NQIVRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQ   49 (244)
T ss_dssp             CCEEEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECT
T ss_pred             cceEEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecC
Confidence            35677788999999999999999999999987632      23566753

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=96.92  E-value=0.0057  Score=53.34  Aligned_cols=98  Identities=13%  Similarity=0.071  Sum_probs=61.1

Q ss_pred             CCCceEEEEEEEEeCCHHHHHHHHHhccC-----cEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEE
Q 027489           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLG-----MSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIE  156 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~DlekSi~FY~~vLG-----f~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IE  156 (222)
                      .-|.++|+|+.+.|+|++        .||     |++......+.++-....+..+                   +.+||
T Consensus        19 ~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd-------------------g~YLE   71 (274)
T 3p8a_A           19 SHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYIN-------------------ENYIE   71 (274)
T ss_dssp             --CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECS-------------------SSEEE
T ss_pred             cCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeC-------------------CEEEE
Confidence            447899999999999884        567     8877654444333222222222                   57999


Q ss_pred             EeecCCCCC--------CC--CCcc-CCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEE
Q 027489          157 LTHNWGTES--------DP--DFKG-YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA  207 (222)
Q Consensus       157 L~~~~g~e~--------d~--~~~~-y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v  207 (222)
                      |+...+.+.        .+  .+.. ... .....|+.|+++.++|++++++++++.|+.+.
T Consensus        72 lIai~~~~~~~~~~~~~~~~~~f~~~~~~-~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~  132 (274)
T 3p8a_A           72 LLDVENNEKLKKMAKTIEGGVAFATQIVQ-EKYEQGFKNICLHTNDIEAVKNKLQSEQVEVV  132 (274)
T ss_dssp             EEEESCHHHHHHHTTSTGGGTCTTTHHHH-TTTCCEEEEEEEECSCHHHHHHHHHTTTCEEE
T ss_pred             EEeecCcccccccccccCccchHHHHhhh-hccCCCeEEEEEecCCHHHHHHHHHHcCCCcC
Confidence            986433210        01  1100 000 01124999999999999999999999998653

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=96.90  E-value=0.026  Score=45.44  Aligned_cols=85  Identities=12%  Similarity=0.083  Sum_probs=52.2

Q ss_pred             EEEEeC-CHHHHHHHHHhcc-CcEEEEEecCCC-------CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           91 TMFRIK-DPKVSLDFYSRVL-GMSLLKRLDFPE-------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        91 v~L~V~-DlekSi~FY~~vL-Gf~l~~~~~~p~-------~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      ..|.+. |.+++++||+++| |.++.....+++       +...+.-+..+                   +..|-+.. .
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~-------------------g~~~m~~d-~   68 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM-------------------GIPCLGLN-G   68 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET-------------------TEEEEEEE-C
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC-------------------CEEEEEEC-C
Confidence            346677 9999999999999 999875433321       23333333332                   23443432 1


Q ss_pred             CCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEE
Q 027489          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFA  207 (222)
Q Consensus       162 g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v  207 (222)
                      ++    .   +. .+   .++ .+++.|+|   +++++++|.+.|.+++
T Consensus        69 ~p----~---~~-~~---~~~-sl~v~~~d~~e~d~~~~~L~~~Gg~v~  105 (163)
T 1u69_A           69 GP----A---FR-HS---EAF-SFQVATDDQAETDRLWNAIVDNGGEES  105 (163)
T ss_dssp             CT----T---CC-CC---TTE-EEEEEESSHHHHHHHHHHHHHTTCEEC
T ss_pred             CC----C---cC-CC---Cce-EEEEEeCCHHHHHHHHHHHHhCCCEEE
Confidence            11    1   11 11   243 68899988   6778899998888876

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=95.25  E-value=0.012  Score=50.08  Aligned_cols=37  Identities=5%  Similarity=-0.084  Sum_probs=32.0

Q ss_pred             CccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEE
Q 027489           79 RDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR  116 (222)
Q Consensus        79 ~~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~  116 (222)
                      |-+.+...++.|+.|.|+|++++.+|| ++|||+...+
T Consensus       150 ~~~~~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          150 PFSADQLLSIGEINITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             CCCGGGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             CCCHHHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccC
Confidence            334466889999999999999999999 9999998753

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=91.40  E-value=0.99  Score=32.61  Aligned_cols=31  Identities=23%  Similarity=0.428  Sum_probs=26.5

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEE
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR  116 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~  116 (222)
                      .-.++|+++.|.|++++.+..++ .|.++...
T Consensus        75 ~~g~~hiaf~v~di~~~~~~l~~-~G~~~~~~  105 (133)
T 3hdp_A           75 GSTPYHICYEVEDIQKSIEEMSQ-IGYTLFKK  105 (133)
T ss_dssp             SCEEEEEEEEESCHHHHHHHHTT-TTEEEEEE
T ss_pred             CCceEEEEEEcCCHHHHHHHHHH-cCCccccC
Confidence            56899999999999999998865 79988764

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=88.90  E-value=0.81  Score=34.51  Aligned_cols=44  Identities=20%  Similarity=0.305  Sum_probs=32.7

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEec
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY  131 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~  131 (222)
                      +-.++|+++.|.|++++.+..++ .|.++......++  ...+|+..
T Consensus       102 ~~g~~Hiaf~v~di~~~~~~l~~-~G~~~~~~~~~~g--~~~~~~~d  145 (159)
T 3gm5_A          102 GEGIHHIAFVVKDMDRKVEELYR-KGMKVIQKGDFEG--GRYAYIDT  145 (159)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHH-TTCCEEEEEEETT--EEEEEESC
T ss_pred             CceEEEEEEEcCCHHHHHHHHHH-CCCcEeeccccCC--eeEEEEec
Confidence            45789999999999999999976 7999876644332  34455543

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=88.70  E-value=0.59  Score=35.68  Aligned_cols=65  Identities=9%  Similarity=0.045  Sum_probs=41.7

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEE-ecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR-LDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~-~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..++|+++.|.|++++.+-.++ .|.++... ......+...+|+...|    |+            +..|||.+..+.
T Consensus        77 ~~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~D----Pd------------G~~iEl~~~~~~  139 (161)
T 3oa4_A           77 GEGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRS----AR------------GVLYEFCEKKEQ  139 (161)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGG----TT------------TCCEEEEECCCC
T ss_pred             CCCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccC----CC------------eEEEEEEecCCc
Confidence            45799999999999999999975 78887543 11111123456663111    11            578999876554


Q ss_pred             CCC
Q 027489          164 ESD  166 (222)
Q Consensus       164 e~d  166 (222)
                      ..+
T Consensus       140 ~~~  142 (161)
T 3oa4_A          140 AEN  142 (161)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            433

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=86.70  E-value=3.8  Score=28.82  Aligned_cols=31  Identities=16%  Similarity=0.223  Sum_probs=26.0

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEE
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLK  115 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~  115 (222)
                      ..-.+.|+++.|.|++++.+-.++ .|.++..
T Consensus        78 ~~~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~  108 (134)
T 3l7t_A           78 EACGLRHLAFYVEDVEASRQELIA-LGIRVEE  108 (134)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHH-HTCCCCC
T ss_pred             CCCCeEEEEEEECCHHHHHHHHHh-CCCcccc
Confidence            456789999999999999998865 7887754

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=85.97  E-value=1.4  Score=32.83  Aligned_cols=33  Identities=18%  Similarity=0.359  Sum_probs=28.0

Q ss_pred             CceeEEEEEeCCHHHHHHHHHh-CCCeEEecCCC
Q 027489          180 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG  212 (222)
Q Consensus       180 ~G~~HIaf~VdDVdaa~~rL~~-~GV~~v~~P~d  212 (222)
                      .+++|+++.|.|++++.+.+++ +|.++.....+
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~   60 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSA   60 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETT
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCC
Confidence            4789999999999999999976 79998766433

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=84.29  E-value=3  Score=30.47  Aligned_cols=30  Identities=17%  Similarity=0.245  Sum_probs=25.4

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEE
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLK  115 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~  115 (222)
                      .-.++|+++.|.|++++.+-.++ .|.++..
T Consensus        93 ~~g~~hl~~~v~d~~~~~~~l~~-~G~~~~~  122 (153)
T 1ss4_A           93 ALGYLRVMFTVEDIDEMVSRLTK-HGAELVG  122 (153)
T ss_dssp             SBEEEEEEEEESCHHHHHHHHHH-TTCEESS
T ss_pred             CCceEEEEEEeCCHHHHHHHHHH-CCCeecC
Confidence            45789999999999999999866 7888754

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=84.17  E-value=4.4  Score=29.54  Aligned_cols=33  Identities=6%  Similarity=-0.070  Sum_probs=26.5

Q ss_pred             CCceEEEEEEEEeC--CHHHHHHHHHhccCcEEEEE
Q 027489           83 TNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKR  116 (222)
Q Consensus        83 t~~~~l~Hv~L~V~--DlekSi~FY~~vLGf~l~~~  116 (222)
                      .....+.|+++.|.  |++++.+..++ .|.++...
T Consensus        92 ~~~~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~  126 (156)
T 3kol_A           92 KTFTRAYHLAFDIDPQLFDRAVTVIGE-NKIAIAHG  126 (156)
T ss_dssp             CCCSSCCEEEEECCGGGHHHHHHHHHH-TTCCEEEE
T ss_pred             CCCCceEEEEEEecHHHHHHHHHHHHH-CCCccccC
Confidence            34556899999999  99999999876 68887643

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=83.17  E-value=3.9  Score=28.81  Aligned_cols=32  Identities=3%  Similarity=-0.058  Sum_probs=22.7

Q ss_pred             CceEEEEEEEEeCC---HHHHHHHHHhccCcEEEEE
Q 027489           84 NGYFMQQTMFRIKD---PKVSLDFYSRVLGMSLLKR  116 (222)
Q Consensus        84 ~~~~l~Hv~L~V~D---lekSi~FY~~vLGf~l~~~  116 (222)
                      ..-.+.|+++.|.|   ++++.+-.++ .|.++...
T Consensus        68 ~~~g~~hi~~~v~d~~~v~~~~~~l~~-~G~~~~~~  102 (127)
T 3e5d_A           68 ENLGWAHIAISTGTKEAVDELTEKLRQ-DGFAIAGE  102 (127)
T ss_dssp             SCSSCCCEEEECSSHHHHHHHHHHHHH-TTCCEEEE
T ss_pred             CCCceEEEEEEcCCHHHHHHHHHHHHH-cCCeEecC
Confidence            34457899999999   5566665543 68887764

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=83.13  E-value=10  Score=26.82  Aligned_cols=29  Identities=3%  Similarity=0.073  Sum_probs=24.6

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEE
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKR  116 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~  116 (222)
                      .+.|+++.|.|++++.+..++ .|.++...
T Consensus        71 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~   99 (135)
T 1f9z_A           71 AYGHIALSVDNAAEACEKIRQ-NGGNVTRE   99 (135)
T ss_dssp             SEEEEEEECSCHHHHHHHHHH-TTCEEEEE
T ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCEEecC
Confidence            578999999999999998865 78887754

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=81.91  E-value=4.2  Score=41.01  Aligned_cols=29  Identities=14%  Similarity=0.241  Sum_probs=26.7

Q ss_pred             EEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          184 HIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       184 HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      |+.|.+.|++++.++|.+.+..+...|.+
T Consensus        97 ~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~  125 (941)
T 3opy_B           97 NIAFKSSSLSKLVKLLKDGGHPVQQSPNE  125 (941)
T ss_dssp             EEEEEESCHHHHHHHHHTTTCCCBCSSSS
T ss_pred             eEEEEeCCHHHHHHHHHhcCCccccCCCc
Confidence            99999999999999999999988877763

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=81.51  E-value=1.6  Score=30.87  Aligned_cols=29  Identities=28%  Similarity=0.529  Sum_probs=25.8

Q ss_pred             ceeEEEEEeCCHHHHHHHHHh-CCCeEEec
Q 027489          181 GFGHIGITVDDVYKACERFER-LGVEFAKK  209 (222)
Q Consensus       181 G~~HIaf~VdDVdaa~~rL~~-~GV~~v~~  209 (222)
                      +++|+++.|.|++++.+.+++ .|.++...
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~   34 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEA   34 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCC
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEe
Confidence            689999999999999999998 89887643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	222
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-30
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	2e-13
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-08
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	3e-08
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-06
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	2e-06
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	3e-06
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	1e-05
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	3e-04
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	0.003
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	0.004

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 1e-30
 Identities = 84/146 (57%), Positives = 103/146 (70%), Gaps = 1/146 (0%)

Query: 73  PGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE 132
               +  D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YE
Sbjct: 9   LSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYE 68

Query: 133 DTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDV 192
           D    P +  ++  W   + AT+ELTHNWGTE D     YHNGNS+PRGFGHIGI V DV
Sbjct: 69  DKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQS-YHNGNSDPRGFGHIGIAVPDV 127

Query: 193 YKACERFERLGVEFAKKPDGGKAGSI 218
           Y AC+RFE LGV+F KKPD GK   +
Sbjct: 128 YSACKRFEELGVKFVKKPDDGKMKGL 153

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 64.1 bits (155), Expect = 2e-13
 Identities = 18/133 (13%), Positives = 27/133 (20%), Gaps = 6/133 (4%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
             F   D       +S  LGM    + D                                
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS--GDLRFLFTAPYSPSL 73

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
               I+ T      S          +S   G   + I V+D   A       G   +  P
Sbjct: 74  SAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPP 133

Query: 211 ----DGGKAGSIH 219
               +      + 
Sbjct: 134 IVLNEAVTIAEVK 146

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 49.7 bits (117), Expect = 2e-08
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 25/129 (19%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
           TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY                   
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY---------------GPET 50

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
           + A IELT+NWG +       Y           HI ++VD+  +ACE+  + G    ++ 
Sbjct: 51  EEAVIELTYNWGVDKYELGTAYG----------HIALSVDNAAEACEKIRQNGGNVTREA 100

Query: 211 DGGKAGSIH 219
              K G+  
Sbjct: 101 GPVKGGTTV 109

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 49.5 bits (117), Expect = 3e-08
 Identities = 18/132 (13%), Positives = 28/132 (21%), Gaps = 8/132 (6%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                 D   +   +S  LG  L  R D      +   L            +        
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRS------GSLSFLFTAPY 70

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
                  T    + S    + +   +        + + V D   A       G   A  P
Sbjct: 71  AHGADAATAALPSFSAAAARRFAADH--GLAVRAVALRVADAEDAFRASVAAGARPAFGP 128

Query: 211 DGGKAGSIHCSV 222
                G     V
Sbjct: 129 VDLGRGFRLAEV 140

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 43.5 bits (101), Expect = 2e-06
 Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 25/122 (20%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
           TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY                   
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGP----------------- 49

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
                       T  +  +            +GHI I V+DV +      +  V    + 
Sbjct: 50  --------EMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYED 101

Query: 211 DG 212
           + 
Sbjct: 102 ES 103

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 43.7 bits (102), Expect = 2e-06
 Identities = 17/118 (14%), Positives = 27/118 (22%), Gaps = 17/118 (14%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 152
           F + + K +  +YS   GM L+                  +                   
Sbjct: 13  FAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTN-----------------GS 55

Query: 153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
           A   LT      +        +      G   + I V D   A       G     +P
Sbjct: 56  ARFVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEP 113

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 43.5 bits (101), Expect = 3e-06
 Identities = 14/120 (11%), Positives = 28/120 (23%), Gaps = 15/120 (12%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
             +   D   +  +Y    G   L R + PE       +                     
Sbjct: 11  VAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMM---------------APAAKL 55

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
                ++        +     +   ++   G  H+   VDD+          GV+     
Sbjct: 56  TEHMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE 115

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 41.4 bits (96), Expect = 1e-05
 Identities = 11/131 (8%), Positives = 26/131 (19%), Gaps = 35/131 (26%)

Query: 88  MQQTMFRIKDP----KVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVD 143
            Q    RI  P       + FY   L +  +         +     G             
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHA--------- 55

Query: 144 RTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFE 200
                                 +       +    P     +   V    ++     + +
Sbjct: 56  ------------------DYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVELAAITSKLK 97

Query: 201 RLGVEFAKKPD 211
            +G +  +  +
Sbjct: 98  HMGYQEVESEN 108

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 17/111 (15%)

Query: 101 SLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN 160
             +FY ++      +  D       L                 + +        I L   
Sbjct: 21  WANFYEKLFNFREARYFDIKGEYTGLTS---------------KAMSAPDGMIRIPLNEE 65

Query: 161 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 211
               +    +     N E  G  H+    DD+ K  +  +++G+ F   P 
Sbjct: 66  SSKGAGQIEEFLMQFNGE--GIQHVAFLTDDLVKTWDALKKIGMRFMTAPP 114

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 34.6 bits (78), Expect = 0.003
 Identities = 17/133 (12%), Positives = 32/133 (24%), Gaps = 26/133 (19%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                K+   +  FY  VLG+  +K     +     +    + T                
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTG--------------- 54

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFA 207
                         S  +                IG+ V          ERFE+  V+ +
Sbjct: 55  --------SPGTELSFFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHS 106

Query: 208 KKPDGGKAGSIHC 220
           +        ++  
Sbjct: 107 EMTTYANRPALQF 119

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 34.2 bits (78), Expect = 0.004
 Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 9/90 (10%)

Query: 129 LGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGIT 188
           +G+   A+  +  V   ++  G+   I L  N    S   +    +G         +   
Sbjct: 30  MGFTKVATHRSKNV--HLYRQGE---INLILNNEPNSIASYFAAEHGP----SVCGMAFR 80

Query: 189 VDDVYKACERFERLGVEFAKKPDGGKAGSI 218
           V D  KA  R   LG +      G    ++
Sbjct: 81  VKDSQKAYNRALELGAQPIHIDTGPMELNL 110

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	222
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.87
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.65
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.64
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.62
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.6
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.57
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.52
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.49
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.48
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.46
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.41
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.4
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.39
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.38
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.38
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.32
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.29
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.27
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.27
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.26
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.26
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.25
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.23
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.21
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.2
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.15
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.1
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.06
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.02
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.97
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.92
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	98.88
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.81
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	98.78
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	98.57
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	98.44
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.05
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	97.51
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	95.85
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	94.62
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	93.45
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	91.79
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	90.04
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	86.98
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	86.1
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	84.75
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	83.33
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	83.18
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	82.0
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	81.57

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.3e-22  Score=159.70  Aligned_cols=154  Identities=55%  Similarity=0.997  Sum_probs=109.7

Q ss_pred             CCCCCCCCCCCCCccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccce
Q 027489           67 ESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTV  146 (222)
Q Consensus        67 ~~~~~~~~~~~~~~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~  146 (222)
                      ++.++++.+|+.|+|++..++++|++|+|+|+++|++||+++|||++....+.+..++.++|++.++....+.....+..
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (176)
T d1qipa_           3 LTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA   82 (176)
T ss_dssp             CCHHHHHHTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHH
T ss_pred             cchhhhhhhhcCCCCCccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccc
Confidence            34456677899999999999999999999999999999999999999988887777788888776543322211111222


Q ss_pred             eecCCCcEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCCcceEEEe
Q 027489          147 WTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKAGSIHCS  221 (222)
Q Consensus       147 w~~~~~~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~m~~laFi  221 (222)
                      +.........+....+.+.... ..+........|+.|+||.|+|++++.++|+++|+++..+|.+|....++|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~  156 (176)
T d1qipa_          83 WALSRKATLELTHNWGTEDDET-QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFI  156 (176)
T ss_dssp             HHTTSSSEEEEEEETTGGGCTT-CCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEE
T ss_pred             cccccccceeEEEeeccccccC-cCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEE
Confidence            2233333333332222111000 0122222223589999999999999999999999999999999999888887

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.65  E-value=2.4e-16  Score=119.73  Aligned_cols=125  Identities=15%  Similarity=0.210  Sum_probs=84.9

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      ++..+|+||+|.|+|+++|++||+++|||+.....+.+..+....+.....             +.......+|+.+...
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~el~~~~~   69 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAA-------------KLTEHMTQVQVMAPLN   69 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSS-------------SCCTTCCEEEEEEESS
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeecee-------------ccccccchhhhhhhhc
Confidence            467899999999999999999999999999887766555444444433211             1112357888876543


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEec-CCCC-CcceEEEeC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGG-KAGSIHCSV  222 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~-P~dG-~m~~laFi~  222 (222)
                      ......  .+...+....|+.||||.|+|+++++++|+++|++++.+ |..| ..+.++|++
T Consensus        70 ~~~~~~--~~~~~~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~  129 (145)
T d1jc4a_          70 DESTVA--KWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMH  129 (145)
T ss_dssp             TTSHHH--HHHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBC
T ss_pred             ccCccc--ccccccCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEe
Confidence            221100  000001112589999999999999999999999999754 4444 345678864

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.64  E-value=3.5e-15  Score=114.04  Aligned_cols=111  Identities=15%  Similarity=0.234  Sum_probs=77.2

Q ss_pred             cCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC-----------CCcEEEEEEecCCCCCCCCCCcccceeec
Q 027489           81 EATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDTASAPADPVDRTVWTF  149 (222)
Q Consensus        81 ~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p-----------~~~~~l~flg~~~~~~~p~d~~~~~~w~~  149 (222)
                      ..++.++++|++|.|+|+++|++||++ |||++..+.+..           +....+.++...+                
T Consensus         3 ~~~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------------   65 (149)
T d1ss4a_           3 AKNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD----------------   65 (149)
T ss_dssp             TTCCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT----------------
T ss_pred             CCCCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecc----------------
Confidence            456789999999999999999999998 999998765422           2233455555433                


Q ss_pred             CCCcEEEEeecCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       150 ~~~~~IEL~~~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                       ....++|+..........   ....+....|+.|+||.|+|+++++++|+++|+++..+|..
T Consensus        66 -~~~~~~l~~~~~~~~~~~---~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~  124 (149)
T d1ss4a_          66 -GHSRIELSRFLTPPTIAD---HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQ  124 (149)
T ss_dssp             -SSCEEEEEEEEESCCCCB---CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEE
T ss_pred             -cceEEEEEeeccccCccc---ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeE
Confidence             135677664322111100   11111123588999999999999999999999999888854

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=1.9e-15  Score=119.57  Aligned_cols=119  Identities=18%  Similarity=0.107  Sum_probs=73.5

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCc--EEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~--~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      ...+++||+|.|+|++++++||+++|||++..+...+...  .....++.++                   ..+.+....
T Consensus         9 ~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~v~~~~~   69 (167)
T d1sqda1           9 KVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGD-------------------LRFLFTAPY   69 (167)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETT-------------------EEEEEEEEC
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCC-------------------eeEEEeccc
Confidence            4678999999999999999999999999998876544322  1122223221                   222221111


Q ss_pred             CCCC-CCCCc----cCCCCC----------CCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCC-cceEEEe
Q 027489          162 GTES-DPDFK----GYHNGN----------SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-AGSIHCS  221 (222)
Q Consensus       162 g~e~-d~~~~----~y~~gn----------~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~-m~~laFi  221 (222)
                      .... .....    ......          ....|++||||.|+|+++++++|+++|++++.+|.+.. ...+|+|
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I  145 (167)
T d1sqda1          70 SPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEV  145 (167)
T ss_dssp             CGGGTTTCCGGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEE
T ss_pred             cccccccccccccccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEE
Confidence            0000 00000    000000          00148999999999999999999999999999996532 2344554

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.7e-16  Score=121.38  Aligned_cols=108  Identities=12%  Similarity=0.148  Sum_probs=76.0

Q ss_pred             CCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCc--EEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        82 ~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~--~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      ..+...|+||+|.|+|+++|++||+++|||++......+.+.  ...+.+..+                   ...++|..
T Consensus         6 ~~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~   66 (149)
T d1sqia1           6 RGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG-------------------KIVFVLCS   66 (149)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEE
T ss_pred             CCceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC-------------------cEEEEEEe
Confidence            455789999999999999999999999999998876543322  222333332                   35677765


Q ss_pred             cCCCCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       160 ~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      ....+..+ ...+..  ..+.|+.||||.|+|+++++++|+++|++++.+|.
T Consensus        67 ~~~~~~~~-~~~~~~--~~g~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~  115 (149)
T d1sqia1          67 ALNPWNKE-MGDHLV--KHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPW  115 (149)
T ss_dssp             ESSTTCHH-HHHHHH--HHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEE
T ss_pred             ccCCCCch-hhhhhh--hCCCeEEEEEEEeccHHHHHHHHHHCCCEEccCCe
Confidence            43322100 000000  01258999999999999999999999999998884

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.57  E-value=5e-15  Score=118.40  Aligned_cols=120  Identities=13%  Similarity=0.063  Sum_probs=76.7

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCc--EEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeec
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~--~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~  160 (222)
                      ...++++||+|.|+|++++++||+++|||++..+...+...  .....++.+                   ...+.+...
T Consensus         9 ~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~   69 (172)
T d1sp8a1           9 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-------------------SLSFLFTAP   69 (172)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEE
T ss_pred             CCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC-------------------CeeeEEeec
Confidence            45789999999999999999999999999999876654332  222223322                   233333221


Q ss_pred             CCCCCCCCCccCCCC---------CCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCC-CcceEEEe
Q 027489          161 WGTESDPDFKGYHNG---------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KAGSIHCS  221 (222)
Q Consensus       161 ~g~e~d~~~~~y~~g---------n~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG-~m~~laFi  221 (222)
                      ...............         +....|++||||.|+|+++++++++++|+++..+|.+. .-..+|||
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v  140 (172)
T d1sp8a1          70 YAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEV  140 (172)
T ss_dssp             CCSSCCGGGCSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEE
T ss_pred             cCCCchhhhcccccCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEE
Confidence            111100000000000         00124899999999999999999999999999999652 22355654

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.52  E-value=3.2e-15  Score=117.97  Aligned_cols=106  Identities=19%  Similarity=0.152  Sum_probs=74.3

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCC--cEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~--~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      ..+|+||+|.|+|+++|++||+++|||++......+..  ....+.++.+                   ...++|....+
T Consensus         5 i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~-------------------~~~i~l~~~~~   65 (163)
T d1t47a1           5 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-------------------SARFVLTSVIK   65 (163)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEESS
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC-------------------CEEEEEeccCC
Confidence            67899999999999999999999999999876543322  2233444432                   46677876433


Q ss_pred             CCCCC--CCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          163 TESDP--DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       163 ~e~d~--~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .....  ....+..  ....|+.||||.|+|+++++++|+++|++++.+|.
T Consensus        66 ~~~~~~~~~~~~~~--~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~  114 (163)
T d1t47a1          66 PATPWGHFLADHVA--EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPY  114 (163)
T ss_dssp             CCSHHHHHHHHHHH--HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCccccccchhhh--cCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCc
Confidence            22100  0000000  01148899999999999999999999999998884

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=4.4e-13  Score=99.21  Aligned_cols=101  Identities=40%  Similarity=0.754  Sum_probs=72.2

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      |++.|++|+|+|+++|++||+++|||++..+.+.+...+....+......               .....+.........
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~   65 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK   65 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceee---------------ecccccccccccccc
Confidence            68999999999999999999999999998887666555555554433210               012333332221111


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                            ...    ..+..|+++.+++++++.++++++|+.+..+|.
T Consensus        66 ------~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  101 (135)
T d1f9za_          66 ------YEL----GTAYGHIALSVDNAAEACEKIRQNGGNVTREAG  101 (135)
T ss_dssp             ------CCC----CSSEEEEEEECSCHHHHHHHHHHTTCEEEEEEE
T ss_pred             ------ccc----cccceeeccchHHHHHHHHHHHHcCCCeecCCc
Confidence                  111    247789999999999999999999999988774

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.48  E-value=3.5e-13  Score=102.98  Aligned_cols=112  Identities=16%  Similarity=0.158  Sum_probs=74.3

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC-CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~-~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ...|+|++|.|+|++++++||+++|||++..+....+ ......+.+.....               ....+++......
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~~~   68 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGS---------------PGTELSFFEIPLV   68 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCC---------------TTSEEEEEECTTC
T ss_pred             ccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccc---------------eeeEEeecccccc
Confidence            4679999999999999999999999999987754332 22223344433211               1345555432211


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                      ..      ...+   ..+++|+||.|+|   ++++.++|+++|+.+....+.+-.+.++|
T Consensus        69 ~~------~~~~---~~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf  119 (144)
T d1zswa1          69 GR------TYRG---TNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQF  119 (144)
T ss_dssp             CB------CBCC---BSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEE
T ss_pred             cC------CccC---CCceeEEEEecCCchhHHHHhhhhhccceeeeCccccCCeEEEEE
Confidence            10      1122   2478999999998   77889999999998755444455566665

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.46  E-value=9.9e-14  Score=105.92  Aligned_cols=102  Identities=11%  Similarity=0.143  Sum_probs=71.5

Q ss_pred             EEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCCc
Q 027489           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (222)
Q Consensus        91 v~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~~  170 (222)
                      |++.|+|+++|++||+++|||++..+.+.+. .+.+++++..+.                 ...++++++.+...     
T Consensus        13 Va~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~~-----------------~~~l~~~~~~~~~~-----   69 (137)
T d1twua_          13 IARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA-----------------DYHLEFTQYEGGST-----   69 (137)
T ss_dssp             EEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSSS-----------------SEEEEEEEETTCCC-----
T ss_pred             EecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCCC-----------------ceeeeccccccccc-----
Confidence            3444589999999999999999987765443 467777776532                 35677776544322     


Q ss_pred             cCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCC-CCcceEEE
Q 027489          171 GYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG-GKAGSIHC  220 (222)
Q Consensus       171 ~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~d-G~m~~laF  220 (222)
                       ..    .+.+.+|++|.|+|   +++++++|+++|+++++++.. +.++.++|
T Consensus        70 -~~----~~~~~~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f  118 (137)
T d1twua_          70 -AP----VPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTI  118 (137)
T ss_dssp             -CC----CCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEE
T ss_pred             -cc----ccccCceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEE
Confidence             11    12467899999886   788999999999999976653 33344443

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.41  E-value=9e-13  Score=96.14  Aligned_cols=98  Identities=13%  Similarity=0.141  Sum_probs=68.4

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .|+|+|+.|.|+|++++++||+++|||++..+.+   ..+  +|+..++                  +..+.+...... 
T Consensus         1 ~m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~--~~~~~~~------------------~~~~~~~~~~~~-   56 (113)
T d1xqaa_           1 AMGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NAF--AVMRDND------------------GFILTLMKGKEV-   56 (113)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TTE--EEEECTT------------------CCEEEEEECSSC-
T ss_pred             CCcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---Ccc--eeeeecc------------------eeeeeeeeeecc-
Confidence            3688999999999999999999999999987643   222  3443322                  355666543211 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                              .     +.+..|++|.|+|   +++++++++++|+++...|. +....++|
T Consensus        57 --------~-----~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~-~~~~~~~~  101 (113)
T d1xqaa_          57 --------Q-----YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKH-AHAYTFYV  101 (113)
T ss_dssp             --------C-----CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCCCEE-C-CEEEEE
T ss_pred             --------c-----ccccceeeeeeccccchhhhhhhHHHcCCccccCCC-CceEEEEE
Confidence                    1     1256799999987   77799999999999765553 33444444

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.40  E-value=9.2e-13  Score=103.71  Aligned_cols=104  Identities=13%  Similarity=0.195  Sum_probs=72.3

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ..++++||+|.|+|++++++||+++|||++..+...+.......++..++..                .... +...  .
T Consensus         2 ~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~-~~~~--~   62 (162)
T d1mpya2           2 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKA----------------HDVA-FIHH--P   62 (162)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBS----------------CSEE-EEEC--S
T ss_pred             CcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccc----------------cccc-cccc--C
Confidence            3678999999999999999999999999998776655555444454433210                1111 1111  0


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCCHH---HHHHHHHhCCCeEEecCCC---CCcceEEE
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDG---GKAGSIHC  220 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdDVd---aa~~rL~~~GV~~v~~P~d---G~m~~laF  220 (222)
                                    .+.+++|++|.+.+++   +++++|+++|+++..+|.+   |.+..++|
T Consensus        63 --------------~~~~~~h~~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~  111 (162)
T d1mpya2          63 --------------EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYF  111 (162)
T ss_dssp             --------------SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEE
T ss_pred             --------------CCCccceeEEEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEE
Confidence                          1237899999998755   7889999999999877754   33444444

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.39  E-value=6.6e-13  Score=98.78  Aligned_cols=93  Identities=17%  Similarity=0.127  Sum_probs=68.0

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      |+++|+.|.|+|+++|++||+++||+++....+    +|  +.+..+                   +..|.|....+...
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~--~~~~~g-------------------~~~l~l~~~~~~~~   55 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG-------------------SHCLMLSQNHLVPL   55 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET-------------------TEEEEEESSCSSSC
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----Ce--EEEEEc-------------------CceeeeeecccCCC
Confidence            689999999999999999999999999876432    23  334443                   34566654322111


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCCCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK  214 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~dG~  214 (222)
                            ...    +.| .|++|.|+|+++++++++++|+++..+|.+.+
T Consensus        56 ------~~~----~~~-~~~~f~v~D~d~~~~~l~~~G~~i~~~~~~~~   93 (115)
T d2i7ra1          56 ------ENF----QSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTD   93 (115)
T ss_dssp             ------CCC----CSC-EEEEEECSCHHHHHHHHHHHTCCEEEEEEECT
T ss_pred             ------CCC----Ccc-eEEEEEECCHHHHHHHHHhhccccccceEEee
Confidence                  011    123 48999999999999999999999998886544

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.38  E-value=2e-12  Score=96.86  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=69.3

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCc-EEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK-FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~-~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ..+++|++|.|+|++++++||+++|||++....+..... ....++..+                   ...+++......
T Consensus         2 i~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~   62 (130)
T d1r9ca_           2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG-------------------DIWVAIMQGEKL   62 (130)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET-------------------TEEEEEEECCCC
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC-------------------CEEEeecccccc
Confidence            457999999999999999999999999998875543211 112333322                   344555432110


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeC--CHHHHHHHHHhCCCeEEecCCC--CCcceEEE
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG--GKAGSIHC  220 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~Vd--DVdaa~~rL~~~GV~~v~~P~d--G~m~~laF  220 (222)
                              .      ..+.+|++|.|+  |+++++++++++|+++..++..  +..+.++|
T Consensus        63 --------~------~~~~~~~~f~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~  109 (130)
T d1r9ca_          63 --------A------ERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYF  109 (130)
T ss_dssp             --------S------SCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEE
T ss_pred             --------c------ccceeeeeecccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEE
Confidence                    0      135679999775  7999999999999999766532  34455555

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.38  E-value=3.4e-12  Score=101.60  Aligned_cols=106  Identities=15%  Similarity=0.086  Sum_probs=72.2

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ....|+||.|.|+|++++++||+++|||++..+.+    .+. +|...++..                ...+.+......
T Consensus         9 ~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~-~~~~~~~~~----------------~~~~~~~~~~~~   67 (170)
T d1zswa2           9 QIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEA-IFQSIKGEA----------------FGEIVVKYLDGP   67 (170)
T ss_dssp             SCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEE-EEESSTTCS----------------TTCEEEEECCSS
T ss_pred             HhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceE-EEEeccCcc----------------ceEEEecccccc
Confidence            35689999999999999999999999999987632    233 233322210                222333222111


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                      ..      . .+   ..+++||||.|+|   ++++.++++++|+++....+.|.++.+||
T Consensus        68 ~~------~-~~---~~~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf  117 (170)
T d1zswa2          68 TE------K-PG---RGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYF  117 (170)
T ss_dssp             BC------B-CC---BTCEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEE
T ss_pred             cc------c-cC---ccccceEEEEeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEE
Confidence            10      1 11   1478999999986   78899999999999754445677888877

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.32  E-value=1.1e-11  Score=94.03  Aligned_cols=102  Identities=21%  Similarity=0.282  Sum_probs=68.2

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      |...++|++|.|+|++++++||+++|||++..+..    ..  .++..++                   ..+.+......
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~--~~~~~~~-------------------~~~~l~~~~~~   55 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TG--AYLTCGD-------------------LWVCLSYDEAR   55 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TE--EEEEETT-------------------EEEEEEECTTC
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec----cc--ccccccc-------------------ccceeeccccc
Confidence            34679999999999999999999999999987643    12  2333332                   22233322221


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEEe--CCHHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~V--dDVdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                      ...+    ..     ..+..|++|.+  +|+++++++|+++|+++...|..+ .+.++|
T Consensus        56 ~~~~----~~-----~~~~~h~~~~~~~~d~~~~~~~l~~~Gv~~~~~~~~~-~~~~~~  104 (140)
T d1npba_          56 QYVP----PQ-----ESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSE-GASFYF  104 (140)
T ss_dssp             CCCC----GG-----GSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCSS-SEEEEE
T ss_pred             ccCC----Cc-----CCccceeeeechHHHHHHHHHHHHHCCCeEeecCCCC-ceEEEE
Confidence            1110    11     13567888888  679999999999999998877543 344443

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.29  E-value=3.6e-11  Score=92.51  Aligned_cols=100  Identities=18%  Similarity=0.279  Sum_probs=68.5

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      ...++++|+.|.|+|++++++||+++|||++....+    .. .++.+.+..                ....+.+...  
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~-~~~~~~~~~----------------~~~~~~~~~~--   68 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NT-IYLRSLEEF----------------IHHNLVLRQG--   68 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SE-EEEECTTCC----------------SSCSEEEEEC--
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----Cc-eeeeccccc----------------ccceeecccc--
Confidence            457899999999999999999999999999987532    22 233333211                0122223211  


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCCC---CCcceEEE
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG---GKAGSIHC  220 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~d---G~m~~laF  220 (222)
                      .               ..+++|++|.|.   |++++.++|+++|+++...|..   |..+.++|
T Consensus        69 ~---------------~~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~  117 (146)
T d1f1ua1          69 P---------------IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRV  117 (146)
T ss_dssp             S---------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEE
T ss_pred             C---------------CCCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEE
Confidence            0               137789999996   5888999999999999876643   33444444

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.27  E-value=9.8e-11  Score=86.20  Aligned_cols=102  Identities=35%  Similarity=0.628  Sum_probs=70.0

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      .||.|++|.|+|+++|++||+++|||++....+.+...+...+.......               ...........+...
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~   66 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEM---------------SSTVLELTYNYGVTS   66 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccc---------------cccccccccccCccc
Confidence            58999999999999999999999999998877655544444444432210               011111111111110


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                            ...    ..+..|+++.+++++++++++...++++..++..
T Consensus        67 ------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  103 (139)
T d2c21a1          67 ------YKH----DEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES  103 (139)
T ss_dssp             ------CCC----CSSEEEEEEEESCHHHHHHHHHHTTCCEEEECSS
T ss_pred             ------ccC----CCccceeeeehhhHHHHHHHHHHcCCceeeCCCC
Confidence                  111    1366799999999999999999999999888743

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.27  E-value=3.5e-11  Score=90.61  Aligned_cols=98  Identities=17%  Similarity=0.190  Sum_probs=66.5

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .-.|+|++|.|+|++++++||+++|||++..+.+  .  .  .++..+                   +..+.........
T Consensus         2 i~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~--~--~--~~~~~~-------------------~~~~~~~~~~~~~   56 (134)
T d1nkia_           2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q--G--AYLELG-------------------SLWLCLSREPQYG   56 (134)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECTTCC
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc--c--e--eeeecC-------------------CeEEEEeeecccc
Confidence            4579999999999999999999999999887643  2  2  223322                   2344443322111


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEe--CCHHHHHHHHHhCCCeEEecCCCCCcceEEE
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKAGSIHC  220 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~V--dDVdaa~~rL~~~GV~~v~~P~dG~m~~laF  220 (222)
                             ..     ..+.+|++|.+  +|+++++++|+++|+++...+ .+..+.++|
T Consensus        57 -------~~-----~~~~~h~~~~~~~~dl~~~~~~l~~~G~~~~~~~-~~~~~~~~f  101 (134)
T d1nkia_          57 -------GP-----AADYTHYAFGIAAADFARFAAQLRAHGVREWKQN-RSEGDSFYF  101 (134)
T ss_dssp             -------CC-----CSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECC-CSSSCEEEE
T ss_pred             -------cc-----ccccccchhccccchHHHHHHHHHHCCCcCccCC-CcceeEEEE
Confidence                   11     12445666655  689999999999999998765 445566665

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.26  E-value=5.3e-12  Score=104.36  Aligned_cols=105  Identities=17%  Similarity=0.304  Sum_probs=69.8

Q ss_pred             eEEEEEEEEeC--CHHHHHHHHHhccCcEEEEEecCCCCcEEEEE--EecCCCCCCCCCCcccceeecCCCcEEEEeecC
Q 027489           86 YFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF--LGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (222)
Q Consensus        86 ~~l~Hv~L~V~--DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~f--lg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~  161 (222)
                      .+++|+++.|+  |++++++||+++|||+.....+.++....+..  +...+                 ....+.+....
T Consensus         4 ~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~-----------------~~~~~~l~~~~   66 (203)
T d1cjxa2           4 KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD-----------------GMIRIPLNEES   66 (203)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT-----------------SSCEEEEEEEC
T ss_pred             CeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccc-----------------cccceecccCC
Confidence            58999999998  99999999999999999877665433222222  22221                 12334443322


Q ss_pred             CCCCC--CCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          162 GTESD--PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       162 g~e~d--~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .....  ..+...+.|    .|++||||.|+|+.+++++|+++|++++..|.
T Consensus        67 ~~~~sqi~~fl~~~~g----~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~pp  114 (203)
T d1cjxa2          67 SKGAGQIEEFLMQFNG----EGIQHVAFLTDDLVKTWDALKKIGMRFMTAPP  114 (203)
T ss_dssp             TTCCSHHHHHHHHHTS----SBCCEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             CCCccHHHHHHHhcCC----CCCceEEEEeCCHHHHHHHHHhcCCccccCch
Confidence            21110  000001122    48999999999999999999999999988764

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.26  E-value=1.4e-11  Score=93.49  Aligned_cols=85  Identities=12%  Similarity=0.186  Sum_probs=63.6

Q ss_pred             eEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCC
Q 027489           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (222)
Q Consensus        86 ~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~  165 (222)
                      ..|.|+.|.|+|++++++||+++|||++..+.+  .    ..++..++.                 ...|.|...  .  
T Consensus         3 ~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~----~~~l~~~~~-----------------~~~l~l~~~--~--   55 (131)
T d1lgta1           3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSR-----------------AWRIAVQQG--E--   55 (131)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSB-----------------SCSEEEEEC--T--
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCceeecCC--c----ceEEeecCC-----------------ceEEEEecC--C--
Confidence            469999999999999999999999999987642  1    234555431                 234555421  1  


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P  210 (222)
                                   ..+..|++|.|.   |+++++++|+++|+++...|
T Consensus        56 -------------~~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~   90 (131)
T d1lgta1          56 -------------VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGD   90 (131)
T ss_dssp             -------------TCEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECC
T ss_pred             -------------CCCceEEEEEEccHHHHHHHHHHHHHcCCceEECC
Confidence                         126789999996   47789999999999998766

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.25  E-value=7.4e-12  Score=98.40  Aligned_cols=105  Identities=21%  Similarity=0.235  Sum_probs=67.3

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC---CCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP---EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p---~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      |....|+|++|.|+|++++++||+++|||++......+   .......|+..+..                 ...+.+..
T Consensus         6 ~~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~h~~a~~~   68 (156)
T d1kw3b2           6 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR-----------------HHTIALAA   68 (156)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEEC
T ss_pred             CCCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc-----------------cceeeecc
Confidence            45578999999999999999999999999987554321   11222344444321                 12232321


Q ss_pred             cCCCCCCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCC--CCcceEEE
Q 027489          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG--GKAGSIHC  220 (222)
Q Consensus       160 ~~g~e~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~d--G~m~~laF  220 (222)
                      .                ..+.+++|++|.|+|   +.+++++|+++|+.+..+.+.  |....+||
T Consensus        69 ~----------------~~~~gl~Hiaf~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~  118 (156)
T d1kw3b2          69 F----------------PIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYA  118 (156)
T ss_dssp             C----------------SCSSSEEEEEEEBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEE
T ss_pred             C----------------CCCCceeEEEEECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEE
Confidence            1                012489999999976   555789999999876443333  33444444

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.23  E-value=4.5e-11  Score=95.57  Aligned_cols=87  Identities=10%  Similarity=0.110  Sum_probs=64.3

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      .++|+|++|.|+|++++++|| ++|||++..+...+.+....+|+..++.                 ...+.+....   
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~-----------------~~~l~~~~~~---   61 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT-----------------VHDTALTGGN---   61 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS-----------------SCSEEEEESS---
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc-----------------ccceeccccc---
Confidence            579999999999999999999 7899999877766665555666665431                 2334443210   


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeE
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEF  206 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~  206 (222)
                                    ..+++|++|.|.+   +.+++++|+++|+.+
T Consensus        62 --------------~~~~~H~~f~~~~~~~v~~~~~~l~~~g~~~   92 (176)
T d1f1ua2          62 --------------GPRMHHVAFATHEKHNIIQICDKMGALRISD   92 (176)
T ss_dssp             --------------BSEEEEEEEECSSHHHHHHHHHHHHHTTCGG
T ss_pred             --------------CCCccceeEEeccchhHHHHHHHHHHcCCce
Confidence                          1378999999986   555778999999853

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.21  E-value=2.8e-11  Score=92.00  Aligned_cols=87  Identities=14%  Similarity=0.209  Sum_probs=64.8

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ..+|+|+.|.|+|++++++||+++|||++..+.+    +  ..|+..++.                 ...+.+...  . 
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~----~--~~~l~~~~~-----------------~~~l~~~~~--~-   55 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----D--AALYRADQR-----------------AWRIAVQPG--E-   55 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----T--EEEEESSSB-----------------SCSEEEEEC--T-
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc----c--eeeeeeeec-----------------ceeeeeecc--C-
Confidence            4589999999999999999999999999877642    1  245555431                 223444321  1 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeC---CHHHHHHHHHhCCCeEEecCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~Vd---DVdaa~~rL~~~GV~~v~~P~  211 (222)
                                    +.++.|++|.|+   |++++.++++++|+++...|.
T Consensus        56 --------------~~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~   91 (132)
T d1kw3b1          56 --------------LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDE   91 (132)
T ss_dssp             --------------TCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCH
T ss_pred             --------------CCCceEEEEEeccHHHHHHHHHHHHHcCCCceecCc
Confidence                          127889999996   478899999999999987664

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.20  E-value=1.7e-11  Score=93.50  Aligned_cols=100  Identities=17%  Similarity=0.312  Sum_probs=64.5

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      ..++|+||.|.|+|++++++||+++|||++..+..  ...+  .+...+..                ....+.+...  .
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~--~~~~--~~~~~~~~----------------~~~~~~~~~~--~   61 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGRV--YLKAWTEV----------------DKFSLVLREA--D   61 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSCE--EEECTTCC----------------BSCSEEEEEC--S
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeec--cCcc--ceeccccc----------------ceeecccccc--C
Confidence            47899999999999999999999999999887533  2222  22222110                0222333221  0


Q ss_pred             CCCCCCccCCCCCCCCCceeEEEEE---eCCHHHHHHHHHhCCCeEEecCCC---CCcceEEE
Q 027489          164 ESDPDFKGYHNGNSEPRGFGHIGIT---VDDVYKACERFERLGVEFAKKPDG---GKAGSIHC  220 (222)
Q Consensus       164 e~d~~~~~y~~gn~~p~G~~HIaf~---VdDVdaa~~rL~~~GV~~v~~P~d---G~m~~laF  220 (222)
                      .               .+..|+++.   ++|+++++++|+++|+++...|..   |..+.++|
T Consensus        62 ~---------------~~~~~~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f  109 (145)
T d1mpya1          62 E---------------PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRF  109 (145)
T ss_dssp             S---------------CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEE
T ss_pred             c---------------ccceeeeeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEE
Confidence            0               134555555   467999999999999999877754   23345554

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.15  E-value=1.6e-10  Score=96.72  Aligned_cols=108  Identities=13%  Similarity=0.235  Sum_probs=68.8

Q ss_pred             CCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCC-----CCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEE
Q 027489           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (222)
Q Consensus        83 t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p-----~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL  157 (222)
                      ....+++||++.|+|++++++||+++|||+..+.....     ........+...+                 +...++|
T Consensus         5 ~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~-----------------g~v~~~l   67 (224)
T d1sp8a2           5 YGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS-----------------ENVLLPL   67 (224)
T ss_dssp             CSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS-----------------SCCEEEE
T ss_pred             CCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCC-----------------Cccceee
Confidence            34679999999999999999999999999988765322     1122223333222                 1344555


Q ss_pred             eecCCCCCCCCC-ccC---CCCCCCCCceeEEEEEeCCHHHHHHHHHhCC----CeEEecCC
Q 027489          158 THNWGTESDPDF-KGY---HNGNSEPRGFGHIGITVDDVYKACERFERLG----VEFAKKPD  211 (222)
Q Consensus       158 ~~~~g~e~d~~~-~~y---~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~G----V~~v~~P~  211 (222)
                      .....+....+. ..+   +.|    .|++||||.|+|+++++++|+++|    +++...|.
T Consensus        68 ~E~~~~~~~~s~i~~FL~~~~g----~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p~  125 (224)
T d1sp8a2          68 NEPVHGTKRRSQIQTFLDHHGG----PGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPT  125 (224)
T ss_dssp             EEECCCSSSCCHHHHHHHHHTS----SEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCCC
T ss_pred             eeecCCCCCccHHHHHHHhccC----CCceeEEEEeCCHHHHHHHHHhccccccceecccch
Confidence            433221111110 001   112    489999999999999999999875    56666653

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.3e-10  Score=96.51  Aligned_cols=109  Identities=14%  Similarity=0.267  Sum_probs=68.8

Q ss_pred             cCCCceEEEEEEEEeCC--HHHHHHHHHhccCcEEEEEecCCC-----CcEEEEEEecCCCCCCCCCCcccceeecCCCc
Q 027489           81 EATNGYFMQQTMFRIKD--PKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPA  153 (222)
Q Consensus        81 ~~t~~~~l~Hv~L~V~D--lekSi~FY~~vLGf~l~~~~~~p~-----~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~  153 (222)
                      |...-.+++|+++.|+|  ++++++||+++|||+..+..+..+     +......+...+                 ...
T Consensus        18 p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~-----------------~~i   80 (210)
T d1sqia2          18 PSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE-----------------ESI   80 (210)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTT-----------------SCC
T ss_pred             CCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecC-----------------ccc
Confidence            34456789999999998  999999999999999876433211     111111122211                 123


Q ss_pred             EEEEeecCCCCCCCC----CccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          154 TIELTHNWGTESDPD----FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       154 ~IEL~~~~g~e~d~~----~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .+.|.... +....+    |...+.|    .|.+||||.|+||.+++++|+++|+++...|.
T Consensus        81 ~~~lne~~-~~~~~sqi~~fl~~~~G----~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          81 KMPINEPA-PGRKKSQIQEYVDYNGG----AGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             EEEEEECC------CHHHHHHHHHTS----SEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             cccccccC-CCCcccHHHHHHhhcCC----CCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence            44443221 111111    1001233    48999999999999999999999999998874

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.06  E-value=5.3e-11  Score=88.93  Aligned_cols=100  Identities=16%  Similarity=0.134  Sum_probs=62.1

Q ss_pred             EEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC-C
Q 027489           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE-S  165 (222)
Q Consensus        87 ~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e-~  165 (222)
                      +|+|++|.|+|+++|++||++ |||.+......+  .+  +++..++                  ...+.+....... .
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~--~~--~~~~~~~------------------~~~~~~~~~~~~~~~   58 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA--PH--TEAVLDG------------------GIRLAWDTVETVRSY   58 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC--SE--EEEECGG------------------GCEEEEEEHHHHHHH
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccc--cc--eeeeccc------------------eeeeeeccccccccc
Confidence            689999999999999999966 899876543322  22  2222221                  2334442211000 0


Q ss_pred             CCCCccCCCCCCCCCceeEEEEEeCC---HHHHHHHHHhCCCeEEecCCCCC
Q 027489          166 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK  214 (222)
Q Consensus       166 d~~~~~y~~gn~~p~G~~HIaf~VdD---Vdaa~~rL~~~GV~~v~~P~dG~  214 (222)
                      .+.   ....  .+.+..|++|.|+|   +++++++++++|++++.+|.+..
T Consensus        59 ~~~---~~~~--~~~~~~~l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~  105 (128)
T d1klla_          59 DPE---WQAP--TGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAV  105 (128)
T ss_dssp             CTT---CCCC--CSSCSCEEEEECSSHHHHHHHHHHHHHTTCEEEEEEEECT
T ss_pred             CCC---CCCC--ccccceeEeeeeccchhhHHHHHHHHhccCccccCCeEcC
Confidence            000   0000  11345699999987   67789999999999999886643

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.02  E-value=2.7e-10  Score=81.97  Aligned_cols=86  Identities=15%  Similarity=0.186  Sum_probs=58.4

Q ss_pred             EEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCCC
Q 027489           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (222)
Q Consensus        90 Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~~  169 (222)
                      ++.|.|+|+++|++||+++|||++....+    .+. .+...+                   .....+... ...     
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~-~~~~~~-------------------~~~~~~~~~-~~~-----   54 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WIV-THASPL-------------------EAHAQVSFA-REG-----   54 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEE-EEEEEE-------------------EEEEEEEEE-SSS-----
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----cee-Eecccc-------------------ccceeeecc-ccc-----
Confidence            67899999999999999999999887532    232 222211                   111112111 111     


Q ss_pred             ccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       170 ~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                        . .    ..+..|++|.|+|+++++++++++|+++..+|.+
T Consensus        55 --~-~----~~~~~~~~~~~~dvd~~~~~l~~~g~~~~~~p~~   90 (111)
T d2pjsa1          55 --G-S----GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVT   90 (111)
T ss_dssp             --B-T----TBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEE
T ss_pred             --C-C----CCceeEEEEEecCHHHHHHHHHhhccccccCCeE
Confidence              0 0    1234689999999999999999999999887754

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.97  E-value=7.3e-10  Score=91.19  Aligned_cols=104  Identities=14%  Similarity=0.262  Sum_probs=66.9

Q ss_pred             eEEEEEEEEeC--CHHHHHHHHHhccCcEEEEEecC-----CCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEe
Q 027489           86 YFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDF-----PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (222)
Q Consensus        86 ~~l~Hv~L~V~--DlekSi~FY~~vLGf~l~~~~~~-----p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~  158 (222)
                      ..++|+++.|+  |+++++.||+++|||+.....+.     +.......-+...+                 ....+-|.
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~-----------------~~v~l~ln   67 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT-----------------LKVKFPIN   67 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT-----------------SCSEEEEE
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccc-----------------cccceeec
Confidence            47999999999  99999999999999998764321     11212211122211                 12333332


Q ss_pred             ecCCCCCCCC----CccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          159 HNWGTESDPD----FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       159 ~~~g~e~d~~----~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      .... ....+    |...+.|    .|.+||||.|+|+.+++++|+++|++++..|.
T Consensus        68 e~~~-~~~~s~i~~FL~~~~g----~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~  119 (199)
T d1t47a2          68 EPAL-AKKKSQIDEYLEFYGG----AGVQHIALNTGDIVETVRTMRAAGVQFLDTPD  119 (199)
T ss_dssp             EECC-SSSCCHHHHHHHHHTS----CEEEEEEEECSCHHHHHHHHHHTTCCBCCCCG
T ss_pred             ccCc-cccccchhhhhhhcCC----CcceEEEEEcCCHHHHHHHHHHcCCCCCCCCh
Confidence            2111 11000    1001222    48999999999999999999999999998884

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.92  E-value=8.3e-10  Score=86.59  Aligned_cols=97  Identities=14%  Similarity=0.069  Sum_probs=66.1

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ...|+||.+.|+|++++.+||++ |||+...+....  ..  ..++.+                   .  |+|+.+....
T Consensus         7 ~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~--~~--~l~~~G-------------------~--i~ll~~~~~~   60 (150)
T d1cjxa1           7 LMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK--NV--HLYRQG-------------------E--INLILNNEPN   60 (150)
T ss_dssp             EEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS--SE--EEEEET-------------------T--EEEEEECCSS
T ss_pred             cCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce--EE--EEEecC-------------------c--EEEEecCCCC
Confidence            56899999999999999999976 999998765422  22  222322                   1  3343332222


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCC
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~  211 (222)
                      +.  ...+..  ....|+.||||.|+|+++++++++++|++++.+|.
T Consensus        61 s~--~~~~~~--~hg~gv~hiaf~V~D~~~a~~~a~~~Ga~~i~~~~  103 (150)
T d1cjxa1          61 SI--ASYFAA--EHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDT  103 (150)
T ss_dssp             SH--HHHHHH--HHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             CH--hHhHHh--hCCCceEEEEEEeCCHHHHHHHHHHCCCEEcccCC
Confidence            10  000100  01258999999999999999999999999887774

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.88  E-value=2.9e-09  Score=80.10  Aligned_cols=97  Identities=9%  Similarity=0.015  Sum_probs=57.1

Q ss_pred             EEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcE-------EEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-------SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        90 Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~-------~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      ++.+.|+|.++|++||+++||+++..+...+++..       .+..+..                   .+..+.+.....
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~-------------------~~~~~~~~~~~~   70 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNL-------------------AGSSFVVCDVSS   70 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEE-------------------TTEEEEEEEGGG
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEE-------------------CCeeeecccccc
Confidence            45677779999999999999999987665443211       0111111                   123344432211


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEecCCC
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG  212 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P~d  212 (222)
                      ... .  .+..    ...+..||++.|+|++++++++.++|++++.+|.+
T Consensus        71 ~~~-~--~~~~----~~~~~~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~  113 (135)
T d1xy7a_          71 LPG-F--STAK----SEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEA  113 (135)
T ss_dssp             STT-C--CCCC----TTSCCCEEEEECSCHHHHHHHHHHTTCEECCCCHH
T ss_pred             ccc-c--ccCC----CCCcceEEEEeecCcceeEEEeecccceEecCccc
Confidence            110 0  0010    11233589999999999999999999999998866

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.81  E-value=1.4e-08  Score=84.99  Aligned_cols=104  Identities=10%  Similarity=0.228  Sum_probs=64.7

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCC-----CcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEe
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~-----~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~  158 (222)
                      ...+++|+++.|+|++++++||.++||+...+.....+     +.....-+...+                 +...+.|.
T Consensus        19 gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~-----------------g~v~~~l~   81 (230)
T d1sqda2          19 GIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND-----------------EMVLLPIN   81 (230)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT-----------------SCSEEEEE
T ss_pred             CcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCC-----------------cccceeEE
Confidence            46679999999999999999999999999887654221     111111122211                 23445554


Q ss_pred             ecCCCCCCCCC-c---cCCCCCCCCCceeEEEEEeCCHHHHHHHHHhC----CCeEEe
Q 027489          159 HNWGTESDPDF-K---GYHNGNSEPRGFGHIGITVDDVYKACERFERL----GVEFAK  208 (222)
Q Consensus       159 ~~~g~e~d~~~-~---~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~----GV~~v~  208 (222)
                      .........+. .   ..+.|    .|.+||||.|+||.+++++|+++    |+++..
T Consensus        82 E~~~~~~~~sqi~~FL~~~~G----~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~~  135 (230)
T d1sqda2          82 EPVHGTKRKSQIQTYLEHNEG----AGLQHLALMSEDIFRTLREMRKRSSIGGFDFMP  135 (230)
T ss_dssp             EECCC---CCHHHHHHHHHTS----CEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCC
T ss_pred             eecCCCCCcchHHHHHhhccC----CceeEEEEEeCCHHHHHHHHHHhhcccCccccc
Confidence            32211111000 0   01223    49999999999999999999996    666653

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=98.78  E-value=8.1e-09  Score=75.46  Aligned_cols=84  Identities=12%  Similarity=0.010  Sum_probs=58.3

Q ss_pred             EEEEE--EEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCC
Q 027489           87 FMQQT--MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (222)
Q Consensus        87 ~l~Hv--~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e  164 (222)
                      ++..+  .|.|+|+++|++||+++|||++....+    .+  .++..+                   +..+.+...... 
T Consensus         3 ~~~~~~pvL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~--~~~~~~-------------------~~~l~l~~~~~~-   56 (122)
T d1jifa_           3 KFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDR----DF--AGVRRG-------------------DIRLHISRTEHQ-   56 (122)
T ss_dssp             CEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS----SE--EEEEET-------------------TEEEEEEECSCH-
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhhhCCceEecCC----ce--eEeeee-------------------eeeeeeeccccc-
Confidence            44444  499999999999999999999876532    23  333433                   345666543110 


Q ss_pred             CCCCCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEec
Q 027489          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK  209 (222)
Q Consensus       165 ~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~  209 (222)
                             ..      .+..|+++.|+|+++++++++++++.....
T Consensus        57 -------~~------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~   88 (122)
T d1jifa_          57 -------IV------ADNTSAWIEVTDPDALHEEWARAVSTDYAD   88 (122)
T ss_dssp             -------HH------HTTCEEEEEESCHHHHHHHHHTTSCSCTTC
T ss_pred             -------cc------cceeEEEEeechhHHHHHHHHhhcceEEee
Confidence                   11      133689999999999999999998776543

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.57  E-value=2.4e-07  Score=67.64  Aligned_cols=80  Identities=18%  Similarity=0.261  Sum_probs=54.1

Q ss_pred             EEE--EEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCC
Q 027489           90 QTM--FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (222)
Q Consensus        90 Hv~--L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~  167 (222)
                      |+.  |.|+|+++|++||++ |||++....+    .+.  ++..+                   ...+.+.......   
T Consensus         3 ~~~p~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~--~~~~~-------------------~~~~~~~~~~~~~---   53 (120)
T d1ecsa_           3 QATPNLPSRDFDSTAAFYER-LGFGIVFRDA----GWM--ILQRG-------------------DLMLEFFAHPGLD---   53 (120)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEECS----SEE--EEEET-------------------TEEEEEEECTTCC---
T ss_pred             eEEEEEEeCCHHHHHHHHHH-cCCeeEEecC----cee--eeecc-------------------eeccccccccccc---
Confidence            444  999999999999987 9999987532    222  22222                   2345554322111   


Q ss_pred             CCccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeEEe
Q 027489          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK  208 (222)
Q Consensus       168 ~~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~v~  208 (222)
                            ..    ....|+++.|+|+++++++++++|+.+..
T Consensus        54 ------~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   84 (120)
T d1ecsa_          54 ------PL----ASWFSCCLRLDDLAEFYRQCKSVGIQETS   84 (120)
T ss_dssp             ------GG----GCCCEEEEEESCHHHHHHHHHHTTCCBCS
T ss_pred             ------cC----CCCcEEEEEECCHHHHHHHHhhhhhhhcc
Confidence                  00    13358999999999999999999888754

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=98.44  E-value=1.5e-06  Score=62.37  Aligned_cols=79  Identities=11%  Similarity=0.091  Sum_probs=52.9

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCCCCCCCC
Q 027489           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (222)
Q Consensus        89 ~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~e~d~~  168 (222)
                      .+..|.|+|+++|++||+++|||++..+.+    .+.  ++..+                   ...+.+....+.     
T Consensus         6 ~~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~~--~~~~~-------------------~~~l~~~~~~~~-----   55 (120)
T d1xrka_           6 AVPVLTARDVAEAVEFWTDRLGFSRVFVED----DFA--GVVRD-------------------DVTLFISAVQDQ-----   55 (120)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEE--EEEET-------------------TEEEEEEECSCT-----
T ss_pred             EEEEEEECCHHHHHHHHHHhhCCeEEEECC----Cee--EEecc-------------------cceeeccccccc-----
Confidence            455699999999999999999999987642    222  22322                   244555432111     


Q ss_pred             CccCCCCCCCCCceeEEEEEeCCHHHHHHHHHhCCCeE
Q 027489          169 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF  206 (222)
Q Consensus       169 ~~~y~~gn~~p~G~~HIaf~VdDVdaa~~rL~~~GV~~  206 (222)
                               .+.+..++.+.+++++..++++.+++++.
T Consensus        56 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (120)
T d1xrka_          56 ---------VVPDNTQAWVWVRGLDELYAEWSEVVSTN   84 (120)
T ss_dssp             ---------TTGGGCEEEEEEECHHHHHHHHTTTSBSC
T ss_pred             ---------cCCCCceEEEeeccHHHHHHHHHHhhhHH
Confidence                     01244688899999999998888765443

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.05  E-value=3.9e-05  Score=57.23  Aligned_cols=106  Identities=13%  Similarity=0.003  Sum_probs=56.6

Q ss_pred             EEeC-CHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecC-CCcEEEEeecCCCCCCCCCc
Q 027489           93 FRIK-DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG-KPATIELTHNWGTESDPDFK  170 (222)
Q Consensus        93 L~V~-DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~-~~~~IEL~~~~g~e~d~~~~  170 (222)
                      |... |.++|++||+++||+++......+++..........      .+  ...+-.+. .+..+.+.... ... +   
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~------~~--~i~ha~l~i~g~~~~~~d~~-~~~-~---   74 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADW------KD--KIMHARLVVGSFALMASDNH-PAY-P---   74 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSS------CC--CEEEEEEEETTEEEEEEECC-TTS-C---
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCC------CC--eEEEEEEEEcCeEEEecccC-Ccc-c---
Confidence            3445 999999999999999998776554432111110000      00  00000000 12233222211 110 0   


Q ss_pred             cCCCCCCCCCceeEEEEEeCCHH--HHHHHHHhCCCeEEecCCCCCcce
Q 027489          171 GYHNGNSEPRGFGHIGITVDDVY--KACERFERLGVEFAKKPDGGKAGS  217 (222)
Q Consensus       171 ~y~~gn~~p~G~~HIaf~VdDVd--aa~~rL~~~GV~~v~~P~dG~m~~  217 (222)
                       ...     .+-.++++.+++.|  +.+.+..+.|++++.+|.+.....
T Consensus        75 -~~~-----~~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~  117 (137)
T d1u6la_          75 -YEG-----IKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAA  117 (137)
T ss_dssp             -CCC-----CCSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEE
T ss_pred             -ccC-----CCcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCCCc
Confidence             111     23357899888655  557777889999999998755543

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.51  E-value=0.0018  Score=48.14  Aligned_cols=96  Identities=6%  Similarity=0.000  Sum_probs=52.4

Q ss_pred             EEEEEeCCHHHHHHHHHhccCcEEEEEec-CC------CCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEeecCC
Q 027489           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLD-FP------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (222)
Q Consensus        90 Hv~L~V~DlekSi~FY~~vLGf~l~~~~~-~p------~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g  162 (222)
                      ++.+.-.|.+++++||+++||.+.+.+.. .+      ++...+.-|..+                   +..|-+.....
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~-------------------~~~i~~~d~~~   69 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG-------------------DQSVHCIDSHV   69 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEEEESS
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC-------------------CEEEEEecCCC
Confidence            34455568999999999999988655432 11      112222222221                   23343432211


Q ss_pred             CCCCCCCccCCCCCCCCCceeEEEEEeCCHHHH--HHHHHhCCCeEEecCCCCCc
Q 027489          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA--CERFERLGVEFAKKPDGGKA  215 (222)
Q Consensus       163 ~e~d~~~~~y~~gn~~p~G~~HIaf~VdDVdaa--~~rL~~~GV~~v~~P~dG~m  215 (222)
                      ...      ...     .+-.++++.+++.|+.  +.+..+.|.+++.++.+...
T Consensus        70 ~~~------~~~-----~~~~s~~l~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~  113 (134)
T d1u7ia_          70 RHA------FDF-----TPAFSFFVDCESNAQIERLAEALSDGGKALMPLGDYGF  113 (134)
T ss_dssp             CCS------CCC-----CTTEEEEEECCCHHHHHHHHHHHHTTSEEEEEEECCSS
T ss_pred             CCC------CCC-----CCceEEEEEeccHHHHHHHHHHHhcCCEEecCcccccc
Confidence            110      111     1235788888875543  44455678899888877443

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=95.85  E-value=0.033  Score=40.75  Aligned_cols=23  Identities=9%  Similarity=0.304  Sum_probs=18.4

Q ss_pred             EEEeC-CHHHHHHHHHhccCcEEE
Q 027489           92 MFRIK-DPKVSLDFYSRVLGMSLL  114 (222)
Q Consensus        92 ~L~V~-DlekSi~FY~~vLGf~l~  114 (222)
                      -|.+. |.+++++||+++||-..+
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v   32 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEI   32 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEE
Confidence            45665 999999999999976543

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=94.62  E-value=0.061  Score=38.46  Aligned_cols=62  Identities=16%  Similarity=0.209  Sum_probs=41.9

Q ss_pred             ccCCCceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEecCCCCCCCCCCcccceeecCCCcEEEEee
Q 027489           80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (222)
Q Consensus        80 ~~~t~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg~~~~~~~p~d~~~~~~w~~~~~~~IEL~~  159 (222)
                      ........++|+++.|.|+++..+..++ .|.++........+.....|+...+                  +..|||.+
T Consensus        86 ~~~~~~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPd------------------G~~iEl~e  146 (149)
T d1ss4a_          86 TAPVNALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVE------------------GILIGLAE  146 (149)
T ss_dssp             TCCSSSBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGG------------------GCEEEEEE
T ss_pred             ccCCCCcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCC------------------CCEEEEEE
Confidence            3344467899999999999999999976 7988754322112334445555332                  57899975


Q ss_pred             c
Q 027489          160 N  160 (222)
Q Consensus       160 ~  160 (222)
                      .
T Consensus       147 ~  147 (149)
T d1ss4a_         147 E  147 (149)
T ss_dssp             E
T ss_pred             c
Confidence            4

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.45  E-value=0.61  Score=35.15  Aligned_cols=18  Identities=17%  Similarity=0.152  Sum_probs=15.3

Q ss_pred             eCCHHHHHHHHHhccCcE
Q 027489           95 IKDPKVSLDFYSRVLGMS  112 (222)
Q Consensus        95 V~DlekSi~FY~~vLGf~  112 (222)
                      -.|.++|++||+++||-.
T Consensus        10 ~Gna~EAl~FY~~vFg~~   27 (156)
T d1u69a_          10 DSAALEAATFYAETFPDS   27 (156)
T ss_dssp             SSCHHHHHHHHHHHSTTE
T ss_pred             CCcHHHHHHHHHHHcCCC
Confidence            368999999999999644

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.79  E-value=0.32  Score=35.84  Aligned_cols=60  Identities=7%  Similarity=0.049  Sum_probs=41.7

Q ss_pred             ceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEe-cCCCCCCCCCCcccceeecCCCcEEEEeecCCC
Q 027489           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLG-YEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (222)
Q Consensus        85 ~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg-~~~~~~~p~d~~~~~~w~~~~~~~IEL~~~~g~  163 (222)
                      +..++|++|.|.|++++.+..++ .|.+.......-.+....+++. ++                   +..++|+...+.
T Consensus       102 ~~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~g-------------------d~~~~~v~r~~~  161 (167)
T d1sqda1         102 GLGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYG-------------------DVVLRYVSYKAE  161 (167)
T ss_dssp             CSEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEET-------------------TEEEEEEEECCC
T ss_pred             CCCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccC-------------------CcEEEEEecCCC
Confidence            45899999999999999999976 6999876643222345555543 22                   467888866554


Q ss_pred             C
Q 027489          164 E  164 (222)
Q Consensus       164 e  164 (222)
                      +
T Consensus       162 ~  162 (167)
T d1sqda1         162 D  162 (167)
T ss_dssp             -
T ss_pred             c
Confidence            3

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=90.04  E-value=0.17  Score=36.10  Aligned_cols=31  Identities=29%  Similarity=0.369  Sum_probs=27.7

Q ss_pred             ceeEEEEEeCCHHHHHHHHHh-CCCeEEecCC
Q 027489          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPD  211 (222)
Q Consensus       181 G~~HIaf~VdDVdaa~~rL~~-~GV~~v~~P~  211 (222)
                      +++||+|.|+|++++++.+++ +|.++..++.
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~   35 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD   35 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCC
Confidence            789999999999999999999 5999876654

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=86.98  E-value=0.28  Score=33.12  Aligned_cols=31  Identities=32%  Similarity=0.521  Sum_probs=26.9

Q ss_pred             ceeEEEEEeCCHHHHHHHHHh-CCCeEEecCC
Q 027489          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPD  211 (222)
Q Consensus       181 G~~HIaf~VdDVdaa~~rL~~-~GV~~v~~P~  211 (222)
                      |++||.+.|+|++++.+-+++ .|.++...+.
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~   34 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG   34 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeec
Confidence            688999999999999999988 6998876553

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=86.10  E-value=1.1  Score=33.12  Aligned_cols=46  Identities=13%  Similarity=0.033  Sum_probs=33.9

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEEEecCCCCcEEEEEEe
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLG  130 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~~~~~p~~~~~l~flg  130 (222)
                      .+..+.|++|.|.|++++.+-.++ .|.++......-.+++...++.
T Consensus        96 ~g~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~  141 (172)
T d1sp8a1          96 HGLAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVE  141 (172)
T ss_dssp             HSSEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEE
T ss_pred             cCCceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEE
Confidence            356899999999999999999965 8999876543222345555554

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.75  E-value=0.39  Score=34.57  Aligned_cols=30  Identities=17%  Similarity=0.162  Sum_probs=25.8

Q ss_pred             CceeEEEEEeCCHHHHHHHHHh-CCCeEEec
Q 027489          180 RGFGHIGITVDDVYKACERFER-LGVEFAKK  209 (222)
Q Consensus       180 ~G~~HIaf~VdDVdaa~~rL~~-~GV~~v~~  209 (222)
                      .+++||+|.|.|++++.+.+++ +|.+.+..
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~   40 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAY   40 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEE
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEEEE
Confidence            4899999999999999999964 79987643

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=83.33  E-value=0.7  Score=32.69  Aligned_cols=31  Identities=23%  Similarity=0.298  Sum_probs=27.3

Q ss_pred             ceeEEEEEeCCHHHHHHHHHh-CCCeEEecCC
Q 027489          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPD  211 (222)
Q Consensus       181 G~~HIaf~VdDVdaa~~rL~~-~GV~~v~~P~  211 (222)
                      .++||+|.|+|+++..+.+++ +|.++..+..
T Consensus         4 ~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~   35 (132)
T d1kw3b1           4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG   35 (132)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET
T ss_pred             cccEEEEEeCCHHHHHHHHHHHhCCceecccc
Confidence            689999999999999999999 5999876653

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=83.18  E-value=0.56  Score=32.68  Aligned_cols=31  Identities=16%  Similarity=0.187  Sum_probs=26.5

Q ss_pred             CceEEEEEEEEeCCHHHHHHHHHhccCcEEEE
Q 027489           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLK  115 (222)
Q Consensus        84 ~~~~l~Hv~L~V~DlekSi~FY~~vLGf~l~~  115 (222)
                      ....++|+++.|.|++++.+-.++ .|.++..
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~  113 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRE-RGVQLLY  113 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHH-HTCCBSC
T ss_pred             CCCcceEEEEecchHHHHHHHHHH-CCCEEeC
Confidence            466899999999999999999976 5988754

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=82.00  E-value=0.28  Score=36.47  Aligned_cols=31  Identities=19%  Similarity=0.156  Sum_probs=27.5

Q ss_pred             CceeEEEEEeCCHHHHHHHHHhCCCeEEecC
Q 027489          180 RGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (222)
Q Consensus       180 ~G~~HIaf~VdDVdaa~~rL~~~GV~~v~~P  210 (222)
                      .|+.||.|.|+|.+++.+.++++|.+.+.+-
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~lGF~~~~~~   38 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEIMGFTKVATH   38 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHHTTCEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHHhCCEEEecc
Confidence            4999999999999999999999999887543

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=81.57  E-value=1  Score=29.29  Aligned_cols=29  Identities=14%  Similarity=0.188  Sum_probs=25.3

Q ss_pred             ceeEEEEEeCCHHHHHHHHHhCCCeEEec
Q 027489          181 GFGHIGITVDDVYKACERFERLGVEFAKK  209 (222)
Q Consensus       181 G~~HIaf~VdDVdaa~~rL~~~GV~~v~~  209 (222)
                      +.+-+-|.|+|.+++++-|+++|++++.+
T Consensus        37 ~~~~~vl~vdd~~~a~~~L~~~G~~vl~~   65 (71)
T d2f06a1          37 NVANVVIRPSNMDKCIEVLKEKKVDLLAA   65 (71)
T ss_dssp             TEEEEEEEESCHHHHHHHHHHTTCEEECH
T ss_pred             CcEEEEEEECCHHHHHHHHHHCCCEEEch
Confidence            44578999999999999999999998754