Citrus Sinensis ID: 027614

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSSGRLSL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccEEEEEEEEEcEEEcccEEEEEccccEEEEEEcccccccccEEEEcccccEEEEEEccccccccEEEEEEccccccccEEEEEEccEEcccccEEEEEEccccccccccccccccEEEEEEEEcccccEEEEcccccEEEEEEEcEEEccEEEEccEEEEEEcccccHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccEEccccccccccEEEEEEEEEEEEccccEEEEEccccEEEEEcccccccccEEEEEcccccEEEEEEcccccccccEEEEEccccccccEEEEEEcccEEccccEEEEEEcccccccccccccccccEEEEEcccccccEEEEcccccEEEEEEEcccccEEEEcccEEEEEEcccccHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mtkvypnanvaaaatatapsipakpqasdanATVLTVWKKSLlfncngftvfdskgdlvfrVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLslgdnwlvydgektdvnprfsvkKHVNILTNKCLAhvsckggdgsssssptnnknVLYEIQGSYAQRACAVYDGRRRRVAEIKkkeavggvafgsdVFRLIVQPEMETAVAMGLVILLDQmfgssgrlsl
Flexible Loop (DISEMBL)
MTKVYPNANVAAAatatapsipakpqASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRlslgdnwlvydgektdvnprfSVKKHVNILTNKCLAHVSCKGgdgsssssptnNKNVLYEIQGSYAQRACAVYDGRRRRVAEikkkeavggvafgsdVFRLIVQPEMETAVAMGLVILLDQMFGSSGRLSL
Low Complexity Region (SEG)
MTKVYPnanvaaaatataPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDGsssssPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSSGRLSL
Disordered region (IsUnstruct)
*******************************ATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSC***************NVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMF********
Disordered Region (DISOPRED)
MTKVYP*******************QASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDG*******NNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGS******
Disordered Region (DISEMBL)
MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVS************TNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSSGRLSL
Disordered Region (DISPRO)
*******************SIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGS******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSSGRLSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q9ZVI6	196	Protein LURP-one-related	yes	no	0.868	0.979	0.540	2e-55
A0MFL4	221	Protein LURP-one-related	no	no	0.864	0.864	0.406	3e-32
Q9LVZ8	220	Protein LURP-one-related	no	no	0.764	0.768	0.403	1e-29
Q9SSC7	210	Protein LURP-one-related	no	no	0.760	0.8	0.451	2e-24
Q9LUM1	230	Protein LURP-one-related	no	no	0.846	0.813	0.324	2e-23
Q67XV7	217	Protein LURP-one-related	no	no	0.832	0.847	0.310	7e-21
Q8LG32	217	Protein LURP-one-related	no	no	0.832	0.847	0.310	7e-21
Q9SH27	215	Protein LURP-one-related	no	no	0.855	0.879	0.272	9e-16
Q9LZX1	217	Protein LURP-one-related	no	no	0.904	0.921	0.261	3e-15
A0MFH4	215	Protein LURP-one-related	no	no	0.891	0.916	0.310	2e-14

>sp|Q9ZVI6|LOR8_ARATH Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640 PE=2 SV=1

 Score =  215 bits (548), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/220 (54%), Positives = 150/220 (68%), Gaps = 28/220 (12%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVF 60
           MTKV+P            PS   +       A VLTVWKKSLLFNC+GFTV+++ G+LVF
Sbjct: 1   MTKVHPKF----------PSTCEESLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVF 50

Query: 61  RVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNIL 120
           RVDNY+   +  IVLMDA+G  LL+IRRK+LSLGD W+VYDGE T+ +P F+ +K+V+I+
Sbjct: 51  RVDNYMNCPRDNIVLMDASGFPLLSIRRKKLSLGDCWMVYDGE-TERDPIFTARKNVSII 109

Query: 121 TN-KCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRR--RRVAEIKKKE 177
           +N K LA VS K             K VLYEI+GSY QR+C + D RR  ++ AEIK+KE
Sbjct: 110 SNRKSLAWVSAK-------------KTVLYEIEGSYGQRSCKILDERRNKKKTAEIKRKE 156

Query: 178 AV-GGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSS 216
            V GGVAFG DV++LIV+ EME  VAM L I+LDQMF SS
Sbjct: 157 TVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQMFRSS 196

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Arabidopsis thaliana (taxid: 3702)

>sp|A0MFL4|LOR17_ARATH Protein LURP-one-related 17 OS=Arabidopsis thaliana GN=At5g41590 PE=2 SV=2

 Score =  138 bits (348), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 123/214 (57%), Gaps = 23/214 (10%)

Query: 13  AATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGE 72
           A ++T  ++           T LTVW+KSLL +C GFTV DS GDL++RVDNY +    E
Sbjct: 17  APSSTESTVSVAAADIGGACTTLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNYARTRPEE 76

Query: 73  IVLMDAAGKSLLTIRR-KRLSLGDNWLVYDGEKTDVN------PRFSVKKHV--NILTNK 123
           ++LMD  G SLL + R K+++L D+W +Y+   T         P + ++K++  NIL+ K
Sbjct: 77  LILMDKDGNSLLLMHRTKKITLVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTK 136

Query: 124 --CLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACA-VYDGRRRRVAEIKKKEA-V 179
              LA+V     D  +S          Y I+GSY  ++C  V+    + V EIK+KE   
Sbjct: 137 SDILAYVYSGSFDKKNS----------YIIKGSYRCKSCKIVHVPLNKTVVEIKRKEVRT 186

Query: 180 GGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMF 213
            GV FGSDVF L+V P  +T +AM LV+LLDQMF
Sbjct: 187 KGVRFGSDVFDLVVNPGFDTGLAMALVLLLDQMF 220

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1

 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 17/186 (9%)

Query: 35  LTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKG--EIVLMDAAGKSLLTIRRKRLS 92
           LTV K SL +  +GF  +D +GD++FRVD+Y    +   EIVLMDA GK LLT++RKR +
Sbjct: 33  LTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRKRPT 92

Query: 93  LGDNWLVYDGEKTD-VNPRFSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEI 151
           L   W  + GE+++   P FSV++  + +  +C   V    G G             Y I
Sbjct: 93  LHQRWEGFLGERSEGQKPIFSVRR--SSIIGRCTMEVEVYDGTGEE-----------YII 139

Query: 152 QGSYAQRACAVYDGRRRRVAEIKKK-EAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLD 210
            G ++QR+C +YD ++  VAEIK+K +A   V  G DVF L ++P  + A AMGLV++LD
Sbjct: 140 DGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLD 199

Query: 211 QMFGSS 216
           Q+ G  
Sbjct: 200 QINGDD 205

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=1 SV=1

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/186 (45%), Positives = 107/186 (57%), Gaps = 18/186 (9%)

Query: 35  LTVWKKSLLFNCNGFTVFDSKGDLVFRVDNY---IQGVKGEIVLMDAAGKSLLTIRRKRL 91
           LTV K SL F  +GFTV+D KG LVFRVD+Y         E+VLMDA G+ LLT+RRKR 
Sbjct: 19  LTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRP 78

Query: 92  SLGDNWLVYDGEKTD-VNPRFSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYE 150
           SL   W  Y GE++D   P F V++   I  N     V    GD   S          Y 
Sbjct: 79  SLRRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVY---GDYQCSE---------YL 126

Query: 151 IQGSYAQRACAVYDGR-RRRVAEIKKK-EAVGGVAFGSDVFRLIVQPEMETAVAMGLVIL 208
           I+GS+  R C V +   RR+VAEI++K +A   V  G DVF L V+P  + A AMGLV++
Sbjct: 127 IEGSFGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLV 186

Query: 209 LDQMFG 214
           LDQ++G
Sbjct: 187 LDQIYG 192

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LUM1|LOR11_ARATH Protein LURP-one-related 11 OS=Arabidopsis thaliana GN=At3g14260 PE=2 SV=1

 Score =  108 bits (271), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 32/219 (14%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVF 60
           M K++P+   + A   T+       Q S       T+W KSL+FN NG TVFDSKG++++
Sbjct: 23  MVKIHPDLTTSGAGEETSSPYLTTEQES------FTIWMKSLVFNTNGCTVFDSKGNIIY 76

Query: 61  RVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDG-----EKTDVNPRFSVKK 115
           RVDNY      E+ LMD +G  L T+RR++  L   W  Y       E T     F VK 
Sbjct: 77  RVDNYNSKSCREVYLMDLSGHVLFTLRRQKFGLFKTWEGYRSSSATVESTTKLEYFRVKN 136

Query: 116 HVNILTNKCLAHVSCKGGDGSSS-----SSPTNNKNVLYEI--QGSYAQRACAVYDGRRR 168
           +V  + NK          D SSS      S  N++   Y++  +GS    + A+ D   +
Sbjct: 137 NVFQVPNK----------DSSSSYRVNAGSCRNDEQYCYKMVTRGS----SLAIEDNCGK 182

Query: 169 RVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVI 207
            +AE+K+K+++ G+  G DV  ++V+ +++ +  +GLV+
Sbjct: 183 LLAEVKRKQSINGLKLGDDVLTMMVESQVDHSFIIGLVL 221

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q67XV7|LOR3_ARATH Protein LURP-one-related 3 OS=Arabidopsis thaliana GN=At1g53890 PE=2 SV=2

 Score =  100 bits (249), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 35/219 (15%)

Query: 1   MTKVYPN----ANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKG 56
           M K+YP+     ++        P +  + +         T+W KSL+FN  G TVFDSKG
Sbjct: 13  MVKIYPHLAFPVDMDVVQDKILPYLTTEQER-------FTIWMKSLVFNSKGCTVFDSKG 65

Query: 57  DLVFRVDNY-IQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKK 115
           +L++RVDNY  +    E+  MD  GK L T+R+K+L    +W  Y+   T    RF ++K
Sbjct: 66  NLIYRVDNYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGYNSTGT----RFRLRK 121

Query: 116 HVNIL------TNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRR 169
              IL      + K +       GD  S     N  +V             A+ DG  R 
Sbjct: 122 IFKILPRESSSSYKVVMGSRIVDGDQQSCYKIVNRGSVF------------AIKDGSGRL 169

Query: 170 VAEIKKKEA-VGGVAFGSDVFRLIVQPEMETAVAMGLVI 207
           +AE+K K + + G+  G DV  ++V+P+++ ++ MG+VI
Sbjct: 170 MAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMGIVI 208

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LG32|LOR2_ARATH Protein LURP-one-related 2 OS=Arabidopsis thaliana GN=At1g53870 PE=2 SV=2

 Score =  100 bits (249), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 35/219 (15%)

Query: 1   MTKVYPN----ANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKG 56
           M K+YP+     ++        P +  + +         T+W KSL+FN  G TVFDSKG
Sbjct: 13  MVKIYPHLAFPVDMDVVQDKILPYLTTEQER-------FTIWMKSLVFNSKGCTVFDSKG 65

Query: 57  DLVFRVDNY-IQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKK 115
           +L++RVDNY  +    E+  MD  GK L T+R+K+L    +W  Y+   T    RF ++K
Sbjct: 66  NLIYRVDNYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGYNSTGT----RFRLRK 121

Query: 116 HVNIL------TNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRR 169
              IL      + K +       GD  S     N  +V             A+ DG  R 
Sbjct: 122 IFKILPRESSSSYKVVMGSRIVDGDQQSCYKIVNRGSVF------------AIKDGSGRL 169

Query: 170 VAEIKKKEA-VGGVAFGSDVFRLIVQPEMETAVAMGLVI 207
           +AE+K K + + G+  G DV  ++V+P+++ ++ MG+VI
Sbjct: 170 MAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMGIVI 208

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SH27|LOR4_ARATH Protein LURP-one-related 4 OS=Arabidopsis thaliana GN=At1g63410 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 35/224 (15%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVF 60
           M +V+P A +++            P  S    T  TVW KSL++  NG TV++S G++ +
Sbjct: 1   MARVFPQAAISS------------PYMSTERET-FTVWMKSLVYQTNGLTVYNSNGEITY 47

Query: 61  RVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYD-----GEKTDVNPRFSVKK 115
           RV+NY      E+ +MD  G  L TIR+K+L L  +W VY          +V P   +K+
Sbjct: 48  RVENY-DKCSNEVHIMDLHGNILFTIRKKKLWLFGSWYVYRECGSFTSTEEVKPCARIKR 106

Query: 116 HVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKK 175
                        S + GD        +  N ++ I     + A  + D     +A++K 
Sbjct: 107 S------------SIRDGDWEVR----DETNEVFWILRFDPKFAFQIIDIHGNIIAQVKP 150

Query: 176 KEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSSGRL 219
           K++  G+  G DV  L V+P ++ ++ + LV +   + G  G +
Sbjct: 151 KQSSNGITLGEDVLTLEVKPRVDHSLVVTLVTVYGLIKGIDGEV 194

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1

 Score = 82.0 bits (201), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 10/210 (4%)

Query: 5   YPNAN-VAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVD 63
           YP  +  + A T  A  +   P+        + + +K +      F + D  G+L+F+V 
Sbjct: 9   YPQGSGPSGAPTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVK 68

Query: 64  NYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNILTNK 123
             + G+  + VL+D +G  ++T+R K +S+ D W V+ G  TD        K  ++L  K
Sbjct: 69  EPVFGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLK 128

Query: 124 CLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRR-VAEIKKKEAVGGV 182
               V              + K   + ++GS+ +R+C VY G     VA++ +K  V  V
Sbjct: 129 TKLDVFL--------GHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSV 180

Query: 183 AFGSDVFRLIVQPEMETAVAMGLVILLDQM 212
             G D F + V P ++ A    LV++LD +
Sbjct: 181 FLGKDNFSVTVYPNVDYAFIASLVVILDDV 210

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|A0MFH4|LOR16_ARATH Protein LURP-one-related 16 OS=Arabidopsis thaliana GN=At5g20640 PE=2 SV=2

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 118/222 (53%), Gaps = 25/222 (11%)

Query: 10  VAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNY-IQG 68
           + A ++ T   + ++  +S++  TVL V ++  + N  GF V +SK  +VFRVD   + G
Sbjct: 1   MGARSSQTVDPVLSRRYSSESE-TVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLG 59

Query: 69  VKGEIVLMDAAGKSLLTIRR-----KRLSLGDN-W--LVYDGEKTDVNPRFSVK--KHVN 118
            KG+++L +  G  LL IR+     + L++  N W    YD E T+    F++K  K   
Sbjct: 60  TKGKLLLRNGDGNDLLLIRKMGGIVQALNMVHNKWEGFGYDNEGTE-RLVFTLKDPKDSC 118

Query: 119 ILTN---KCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIK- 174
           ++ N   K L H     G     SS  NN     EI+GS+A+RAC + D   + +A+++ 
Sbjct: 119 LVQNSSIKILVH-----GKPPKISSTRNN---YVEIKGSFAERACNIMDSDGKAIAKVRI 170

Query: 175 KKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSS 216
           +KE    V    D++ +IV+P ++ +  +GL+ +LD + G S
Sbjct: 171 EKEMEEMVGNKKDLYHVIVKPNVDQSFIVGLIAILDYIHGES 212

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
118486089	218	unknown [Populus trichocarpa]	0.950	0.963	0.665	3e-76
224069042	211	predicted protein [Populus trichocarpa]	0.923	0.966	0.669	1e-74
255557895	215	GTP binding protein, putative [Ricinus c	0.954	0.981	0.687	6e-74
224140655	207	predicted protein [Populus trichocarpa]	0.909	0.971	0.675	2e-73
225439060	216	PREDICTED: protein LURP-one-related 8 [V	0.977	1.0	0.678	2e-73
225439327	200	PREDICTED: protein LURP-one-related 8 [V	0.900	0.995	0.671	4e-72
449439787	199	PREDICTED: protein LURP-one-related 8-li	0.882	0.979	0.587	4e-64
297827447	196	hypothetical protein ARALYDRAFT_482873 [	0.868	0.979	0.545	4e-54
15224921	196	protein LURP-one-related 8 [Arabidopsis	0.868	0.979	0.540	9e-54
359807458	208	uncharacterized protein LOC100795046 [Gl	0.895	0.951	0.524	3e-50

>gi|118486089|gb|ABK94888.1| unknown [Populus trichocarpa]

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 151/227 (66%), Positives = 176/227 (77%), Gaps = 17/227 (7%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQAS----DAN-ATVLTVWKKSLLFNCNGFTVFDSK 55
           MTKVYPN    AAAT        K ++S    DA+ A VLTVWKKSLLFNCNGFTVFDSK
Sbjct: 1   MTKVYPNVAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDSK 60

Query: 56  GDLVFRVDNYI--QGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSV 113
           G+L+FRVDNY+   G  GEIVLMDAAGK LLT+RRKRLSLGD+WLVYDGE T +NP FSV
Sbjct: 61  GNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGE-TAINPEFSV 119

Query: 114 KKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEI 173
           KKHV+IL  KCLAHVS   G         +NKNV+YEI+GSY QR CAVYD ++RRVAEI
Sbjct: 120 KKHVSILNKKCLAHVSQAAG---------SNKNVMYEIEGSYTQRCCAVYDEKKRRVAEI 170

Query: 174 KKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSSGRLS 220
           K+KE VGGVAFG DVFRL+V PE+++++AM +VI+LDQMFGS+ R S
Sbjct: 171 KQKERVGGVAFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFGSTRRFS 217

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069042|ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|222833453|gb|EEE71930.1| predicted protein [Populus trichocarpa]

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 148/221 (66%), Positives = 172/221 (77%), Gaps = 17/221 (7%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQAS----DAN-ATVLTVWKKSLLFNCNGFTVFDSK 55
           MTKVYPN    AAAT        K ++S    DA+ A VLTVWKKSLLFNCNGFTVFDSK
Sbjct: 1   MTKVYPNVAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDSK 60

Query: 56  GDLVFRVDNYI--QGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSV 113
           G+L+FRVDNY+   G  GEIVLMDAAGK LLT+RRKRLSLGD+WLVYDGE T +NP FSV
Sbjct: 61  GNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGE-TAINPEFSV 119

Query: 114 KKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEI 173
           KKHV+IL  KCLAHVS   G         +NKNV+YEI+GSY QR CAVYD ++RRVAEI
Sbjct: 120 KKHVSILNKKCLAHVSQAAG---------SNKNVMYEIEGSYTQRCCAVYDEKKRRVAEI 170

Query: 174 KKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFG 214
           K+KE VGGVAFG DVFRL+V PE+++++AM +VI+LDQMFG
Sbjct: 171 KQKERVGGVAFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFG 211

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557895|ref|XP_002519976.1| GTP binding protein, putative [Ricinus communis] gi|223540740|gb|EEF42300.1| GTP binding protein, putative [Ricinus communis]

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 152/221 (68%), Positives = 176/221 (79%), Gaps = 10/221 (4%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVF 60
           MTKVYPN  +AAA+T     + +    + A+A VLTVWKKSLLFNCNGFTV+D  G+LVF
Sbjct: 1   MTKVYPN--IAAASTPVVEKLKSSSLDT-ADAIVLTVWKKSLLFNCNGFTVYDGSGNLVF 57

Query: 61  RVDNYI--QGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVN 118
           RVDNY+   G  GEIVLMDA GK LLTIRRKRLSLGDNWLVYDGE T VNP FSV+KHV 
Sbjct: 58  RVDNYMAGSGANGEIVLMDADGKPLLTIRRKRLSLGDNWLVYDGE-TAVNPLFSVRKHVK 116

Query: 119 ILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEA 178
           IL  K LAHVS      SSS S +N+KN++YEI+GSY+QR+CAVYD + RRVAEIK+KEA
Sbjct: 117 ILNTKSLAHVSGN----SSSGSTSNSKNIVYEIEGSYSQRSCAVYDDKHRRVAEIKQKEA 172

Query: 179 VGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSSGRL 219
           VGGVAFG DVFRLI+ P+M+T+VAM +VILLDQMFGSS R 
Sbjct: 173 VGGVAFGVDVFRLIIGPKMDTSVAMAIVILLDQMFGSSRRF 213

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140655|ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|222868327|gb|EEF05458.1| predicted protein [Populus trichocarpa]

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 148/219 (67%), Positives = 166/219 (75%), Gaps = 18/219 (8%)

Query: 1   MTKVYPNANVAAAATATAPSI----PAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKG 56
           MTKVYPN  VA   T     +    PA       +A VLTVWKKSLLFNC+GFTV+D +G
Sbjct: 1   MTKVYPN--VAPTTTNKKQQLFNLKPANNALDVDHAVVLTVWKKSLLFNCHGFTVYDGRG 58

Query: 57  DLVFRVDNYI--QGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVK 114
           +LVFRVDNY+   G  GEIVLMDAAGK LLTIRRKRLSLGDNWLVY+GE T  NPRF VK
Sbjct: 59  NLVFRVDNYMATSGNNGEIVLMDAAGKPLLTIRRKRLSLGDNWLVYEGETT-TNPRFLVK 117

Query: 115 KHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIK 174
           KHVNIL  KCLAHVS   G         +NKNV+YEI+GSYAQR CAVYD ++RRVAEIK
Sbjct: 118 KHVNILNTKCLAHVSPASG---------SNKNVVYEIEGSYAQRCCAVYDEKKRRVAEIK 168

Query: 175 KKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMF 213
           +KE+VGGVAFG DVFRLIV PEM T++AM +VILLDQMF
Sbjct: 169 QKESVGGVAFGVDVFRLIVGPEMGTSMAMAMVILLDQMF 207

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439060|ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera] gi|147770903|emb|CAN65231.1| hypothetical protein VITISV_007600 [Vitis vinifera] gi|239056173|emb|CAQ58606.1| unknown gene [Vitis vinifera] gi|239056193|emb|CAQ58630.1| Unknown gene [Vitis vinifera]

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/221 (67%), Positives = 172/221 (77%), Gaps = 5/221 (2%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVF 60
           MTKVYPNA  A+  +          +    +A VLTVWKKSLLFNCNGFTVFD KG+LVF
Sbjct: 1   MTKVYPNATAASCGSEGVNLCIGVGR----DAAVLTVWKKSLLFNCNGFTVFDGKGNLVF 56

Query: 61  RVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNIL 120
           RVDNY+ G KGEIVLMDA+GK LLTIRRKRLSLGDNW+VYDGE  + NPRF V+KH N+L
Sbjct: 57  RVDNYVAGHKGEIVLMDASGKPLLTIRRKRLSLGDNWMVYDGETAE-NPRFQVRKHANLL 115

Query: 121 TNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVG 180
            +K LA VS  GG G SSSS ++ +N +YEI+GSY+QR CAVYD  RR VAEIK+KEAV 
Sbjct: 116 NSKSLARVSGGGGAGGSSSSSSSPRNAMYEIEGSYSQRCCAVYDETRRCVAEIKRKEAVA 175

Query: 181 GVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSSGRLSL 221
           GVA G DVFRL+VQPEM+T VAM LVILLDQMFGSS R S+
Sbjct: 176 GVALGVDVFRLVVQPEMDTPVAMALVILLDQMFGSSKRFSV 216

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439327|ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera] gi|296089330|emb|CBI39102.3| unnamed protein product [Vitis vinifera]

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 143/213 (67%), Positives = 164/213 (76%), Gaps = 14/213 (6%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVF 60
           MTKVYPNA  A++ +        K      +  VLTVWKKSLLFNC+GFTVFD KG+LVF
Sbjct: 1   MTKVYPNATAASSGSEGV-----KLCIGGGDPAVLTVWKKSLLFNCSGFTVFDGKGNLVF 55

Query: 61  RVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNIL 120
           RVDNY+ G KGEIVLMDA+GK LLTIRRKRLSLGDNWLVYDGE T  NPRF ++KH+N+L
Sbjct: 56  RVDNYVAGNKGEIVLMDASGKPLLTIRRKRLSLGDNWLVYDGE-TAANPRFQMRKHLNLL 114

Query: 121 TNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVG 180
           ++K LA VS     G SSSS    +  +YEI+GSY+QR CAVYD RRR VAEIK+KEA+ 
Sbjct: 115 SSKSLARVS-----GGSSSS---MRKAMYEIEGSYSQRCCAVYDERRRCVAEIKRKEAMA 166

Query: 181 GVAFGSDVFRLIVQPEMETAVAMGLVILLDQMF 213
           GVA G DVFRLIVQPEM+T VAM LVILLDQMF
Sbjct: 167 GVALGVDVFRLIVQPEMDTPVAMALVILLDQMF 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439787|ref|XP_004137667.1| PREDICTED: protein LURP-one-related 8-like [Cucumis sativus] gi|449497151|ref|XP_004160327.1| PREDICTED: protein LURP-one-related 8-like [Cucumis sativus]

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 127/216 (58%), Positives = 156/216 (72%), Gaps = 21/216 (9%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVF 60
           MTKV+PN           PS       SDA  TVLTVWKKS+L NC GFTVF+++G+LV+
Sbjct: 1   MTKVFPNG----------PS----SSCSDAIETVLTVWKKSMLLNCEGFTVFNAEGNLVY 46

Query: 61  RVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNIL 120
           RVDNY+ G KGEI+LMDAAG  L TIRRKRLSL D+W+VY+GE T  NPRFS +K +N+L
Sbjct: 47  RVDNYLAGNKGEILLMDAAGNPLFTIRRKRLSLADSWVVYEGE-TGANPRFSARKQMNLL 105

Query: 121 TNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVG 180
            +KCLA V    G  S           +YEI+G Y +R CAVYD +RR VAEIK+KEA G
Sbjct: 106 KSKCLARVVELAGSWSGKGMS------VYEIEGCYGKRCCAVYDEKRRIVAEIKRKEAAG 159

Query: 181 GVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSS 216
           G++FG+DVFRL+VQP+++T VAM L+ILLDQMFGSS
Sbjct: 160 GLSFGTDVFRLVVQPQIDTTVAMALLILLDQMFGSS 195

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827447|ref|XP_002881606.1| hypothetical protein ARALYDRAFT_482873 [Arabidopsis lyrata subsp. lyrata] gi|297327445|gb|EFH57865.1| hypothetical protein ARALYDRAFT_482873 [Arabidopsis lyrata subsp. lyrata]

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/220 (54%), Positives = 150/220 (68%), Gaps = 28/220 (12%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVF 60
           MTKV+P            P+   +       A VLTVWKKSLLFNC+GFTV+++ G+LVF
Sbjct: 1   MTKVHPKF----------PNTCDESLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVF 50

Query: 61  RVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNIL 120
           RVDNY+   +  IVLMDA+G  LL+IRRK+LSLGD W+VYDGE T+ +P  + +K+VNIL
Sbjct: 51  RVDNYMNCPRDNIVLMDASGFPLLSIRRKKLSLGDCWMVYDGE-TERDPILTARKNVNIL 109

Query: 121 TN-KCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRR--RRVAEIKKKE 177
           TN + LA VS K             K VLYEI+GSY+QR+C + D RR  ++ AEIK+KE
Sbjct: 110 TNRRSLAWVSAK-------------KTVLYEIEGSYSQRSCKILDERRNKKKTAEIKRKE 156

Query: 178 AV-GGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSS 216
            V GGVAFG DVF+LIV+ EME  VAM L I+LDQMF SS
Sbjct: 157 TVIGGVAFGKDVFKLIVESEMEPRVAMALTIILDQMFRSS 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224921|ref|NP_181398.1| protein LURP-one-related 8 [Arabidopsis thaliana] gi|75216986|sp|Q9ZVI6.1|LOR8_ARATH RecName: Full=Protein LURP-one-related 8 gi|3786008|gb|AAC67354.1| unknown protein [Arabidopsis thaliana] gi|61656129|gb|AAX49367.1| At2g38640 [Arabidopsis thaliana] gi|110741793|dbj|BAE98840.1| hypothetical protein [Arabidopsis thaliana] gi|330254466|gb|AEC09560.1| protein LURP-one-related 8 [Arabidopsis thaliana]

 Score =  215 bits (548), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 119/220 (54%), Positives = 150/220 (68%), Gaps = 28/220 (12%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVF 60
           MTKV+P            PS   +       A VLTVWKKSLLFNC+GFTV+++ G+LVF
Sbjct: 1   MTKVHPKF----------PSTCEESLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVF 50

Query: 61  RVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNIL 120
           RVDNY+   +  IVLMDA+G  LL+IRRK+LSLGD W+VYDGE T+ +P F+ +K+V+I+
Sbjct: 51  RVDNYMNCPRDNIVLMDASGFPLLSIRRKKLSLGDCWMVYDGE-TERDPIFTARKNVSII 109

Query: 121 TN-KCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRR--RRVAEIKKKE 177
           +N K LA VS K             K VLYEI+GSY QR+C + D RR  ++ AEIK+KE
Sbjct: 110 SNRKSLAWVSAK-------------KTVLYEIEGSYGQRSCKILDERRNKKKTAEIKRKE 156

Query: 178 AV-GGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSS 216
            V GGVAFG DV++LIV+ EME  VAM L I+LDQMF SS
Sbjct: 157 TVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQMFRSS 196

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807458|ref|NP_001241138.1| uncharacterized protein LOC100795046 [Glycine max] gi|255638163|gb|ACU19395.1| unknown [Glycine max]

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/227 (52%), Positives = 145/227 (63%), Gaps = 29/227 (12%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDANATVLTVWKKSLLFNCNGFTVFDS-KGDLV 59
           MTKV+PNAN +   + T    P K   SDA A VLTVWKKSLL NCNGFTVFD+ +G+LV
Sbjct: 1   MTKVHPNANASVCVSETETEKPNK--NSDAMAVVLTVWKKSLLPNCNGFTVFDTQRGNLV 58

Query: 60  FRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSL-GDNWLVYDGEKTDVNPRF---SVKK 115
           FRVDNY+   K +I+LMDAAG  LLTIRRKRLSL  D WLV++GE + V  +    + +K
Sbjct: 59  FRVDNYVARNKDQILLMDAAGTPLLTIRRKRLSLVSDTWLVFEGEGS-VKQKLLFTAARK 117

Query: 116 HVNILTNKC-LAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIK 174
           +VN    KC LAH+                K V YEI+GSYAQR C  Y+  + +VAE+K
Sbjct: 118 NVNA---KCTLAHIF------------NIKKEVAYEIEGSYAQRCCTFYNNNKIKVAEMK 162

Query: 175 KKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSSGRLSL 221
            KE      FG+D+FRL VQP M+T +AM  VILLD MF S  R S 
Sbjct: 163 MKE-----TFGADIFRLFVQPHMDTTLAMAFVILLDHMFPSPSRSSF 204

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
TAIR|locus:2064179	196	AT2G38640 "AT2G38640" [Arabido	0.832	0.938	0.565	1.2e-49
TAIR|locus:2160427	221	AT5G41590 "AT5G41590" [Arabido	0.773	0.773	0.453	6.9e-31
TAIR|locus:2093242	220	AT3G15810 "AT3G15810" [Arabido	0.755	0.759	0.407	3.1e-28
TAIR|locus:2016299	210	AT1G80120 "AT1G80120" [Arabido	0.755	0.795	0.449	9.4e-27
TAIR|locus:2197036	217	AT1G53870 "AT1G53870" [Arabido	0.723	0.737	0.352	1e-20
TAIR|locus:2091040	230	AT3G14260 "AT3G14260" [Arabido	0.737	0.708	0.335	3.5e-20
TAIR|locus:2197046	580	AT1G53880 "AT1G53880" [Arabido	0.705	0.268	0.341	7.2e-19
TAIR|locus:2814880	580	AT1G53900 "AT1G53900" [Arabido	0.705	0.268	0.341	7.2e-19
TAIR|locus:2181082	217	AT5G01750 "AT5G01750" [Arabido	0.769	0.783	0.279	7.7e-16
TAIR|locus:2180459	215	AT5G20640 "AT5G20640" [Arabido	0.828	0.851	0.313	7.7e-16

TAIR|locus:2064179 AT2G38640 "AT2G38640" [Arabidopsis thaliana (taxid:3702)]

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 116/205 (56%), Positives = 148/205 (72%)

Query:    19 PSIPAKPQAS--DANATV-LTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVL 75
             P  P+  + S  D+ A V LTVWKKSLLFNC+GFTV+++ G+LVFRVDNY+   +  IVL
Sbjct:     6 PKFPSTCEESLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDNIVL 65

Query:    76 MDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKHVNILTN-KCLAHVSCKGGD 134
             MDA+G  LL+IRRK+LSLGD W+VYDGE T+ +P F+ +K+V+I++N K LA VS K   
Sbjct:    66 MDASGFPLLSIRRKKLSLGDCWMVYDGE-TERDPIFTARKNVSIISNRKSLAWVSAK--- 121

Query:   135 GXXXXXPTNNKNVLYEIQGSYAQRACAVYDGRR--RRVAEIKKKEAV-GGVAFGSDVFRL 191
                       K VLYEI+GSY QR+C + D RR  ++ AEIK+KE V GGVAFG DV++L
Sbjct:   122 ----------KTVLYEIEGSYGQRSCKILDERRNKKKTAEIKRKETVIGGVAFGKDVYKL 171

Query:   192 IVQPEMETAVAMGLVILLDQMFGSS 216
             IV+ EME  VAM L I+LDQMF SS
Sbjct:   172 IVESEMEPRVAMALTIILDQMFRSS 196

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2160427 AT5G41590 "AT5G41590" [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 88/194 (45%), Positives = 119/194 (61%)

Query:    33 TVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRR-KRL 91
             T LTVW+KSLL +C GFTV DS GDL++RVDNY +    E++LMD  G SLL + R K++
Sbjct:    37 TTLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNYARTRPEELILMDKDGNSLLLMHRTKKI 96

Query:    92 SLGDNWLVYD-----GE-KTDVNPRFSVKKHV--NILTNKC--LAHVSCKGGDGXXXXXP 141
             +L D+W +Y+     GE K    P + ++K++  NIL+ K   LA+V     D       
Sbjct:    97 TLVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTKSDILAYVYSGSFD------- 149

Query:   142 TNNKNVLYEIQGSYAQRACA-VYDGRRRRVAEIKKKEA-VGGVAFGSDVFRLIVQPEMET 199
                KN  Y I+GSY  ++C  V+    + V EIK+KE    GV FGSDVF L+V P  +T
Sbjct:   150 --KKNS-YIIKGSYRCKSCKIVHVPLNKTVVEIKRKEVRTKGVRFGSDVFDLVVNPGFDT 206

Query:   200 AVAMGLVILLDQMF 213
              +AM LV+LLDQMF
Sbjct:   207 GLAMALVLLLDQMF 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2093242 AT3G15810 "AT3G15810" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 75/184 (40%), Positives = 109/184 (59%)

Query:    35 LTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKG--EIVLMDAAGKSLLTIRRKRLS 92
             LTV K SL +  +GF  +D +GD++FRVD+Y    +   EIVLMDA GK LLT++RKR +
Sbjct:    33 LTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRKRPT 92

Query:    93 LGDNWLVYDGEKTD-VNPRFSVKKHVNILTNKCLAHVSCKGGDGXXXXXPTNNKNVLYEI 151
             L   W  + GE+++   P FSV++  + +  +C   V    G G             Y I
Sbjct:    93 LHQRWEGFLGERSEGQKPIFSVRR--SSIIGRCTMEVEVYDGTGEE-----------YII 139

Query:   152 QGSYAQRACAVYDGRRRRVAEIKKK-EAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLD 210
              G ++QR+C +YD ++  VAEIK+K +A   V  G DVF L ++P  + A AMGLV++LD
Sbjct:   140 DGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLD 199

Query:   211 QMFG 214
             Q+ G
Sbjct:   200 QING 203

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016299 AT1G80120 "AT1G80120" [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 84/187 (44%), Positives = 107/187 (57%)

Query:    35 LTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVK----GEIVLMDAAGKSLLTIRRKR 90
             LTV K SL F  +GFTV+D KG LVFRVD+Y  G       E+VLMDA G+ LLT+RRKR
Sbjct:    19 LTVRKTSLFFAGDGFTVYDCKGSLVFRVDSY-GGPNTRDTDEVVLMDAHGRCLLTLRRKR 77

Query:    91 LSLGDNWLVYDGEKTD-VNPRFSVKKHVNILTNKCLAHVSCKGGDGXXXXXPTNNKNVLY 149
              SL   W  Y GE++D   P F V++   I  N     V    GD              Y
Sbjct:    78 PSLRRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVY---GDYQCSE---------Y 125

Query:   150 EIQGSYAQRACAVYDGR-RRRVAEIKKK-EAVGGVAFGSDVFRLIVQPEMETAVAMGLVI 207
              I+GS+  R C V +   RR+VAEI++K +A   V  G DVF L V+P  + A AMGLV+
Sbjct:   126 LIEGSFGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVL 185

Query:   208 LLDQMFG 214
             +LDQ++G
Sbjct:   186 VLDQIYG 192

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2197036 AT1G53870 "AT1G53870" [Arabidopsis thaliana (taxid:3702)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 62/176 (35%), Positives = 97/176 (55%)

Query:    36 TVWKKSLLFNCNGFTVFDSKGDLVFRVDNY-IQGVKGEIVLMDAAGKSLLTIRRKRLSLG 94
             T+W KSL+FN  G TVFDSKG+L++RVDNY  +    E+  MD  GK L T+R+K+L   
Sbjct:    45 TIWMKSLVFNSKGCTVFDSKGNLIYRVDNYDSKSWSNEVYFMDLNGKILFTLRQKKLGFF 104

Query:    95 DNWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDGXXXXXPTNNKNVLYEI--Q 152
              +W  Y+   T    RF ++K   IL  +  +      G          ++   Y+I  +
Sbjct:   105 KSWEGYNSTGT----RFRLRKIFKILPRESSSSYKVVMGSRIVD----GDQQSCYKIVNR 156

Query:   153 GSYAQRACAVYDGRRRRVAEIKKKEA-VGGVAFGSDVFRLIVQPEMETAVAMGLVI 207
             GS      A+ DG  R +AE+K K + + G+  G DV  ++V+P+++ ++ MG+VI
Sbjct:   157 GS----VFAIKDGSGRLMAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMGIVI 208

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2091040 AT3G14260 "AT3G14260" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 60/179 (33%), Positives = 99/179 (55%)

Query:    36 TVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGD 95
             T+W KSL+FN NG TVFDSKG++++RVDNY      E+ LMD +G  L T+RR++  L  
Sbjct:    52 TIWMKSLVFNTNGCTVFDSKGNIIYRVDNYNSKSCREVYLMDLSGHVLFTLRRQKFGLFK 111

Query:    96 NWLVYDGEKTDVNPR-----FSVKKHVNILTNKCLAHVSCKGGDGXXXXXPTNNKNVLYE 150
              W  Y      V        F VK +V  + NK  +  S +   G       N++   Y+
Sbjct:   112 TWEGYRSSSATVESTTKLEYFRVKNNVFQVPNKDSSS-SYRVNAGSCR----NDEQYCYK 166

Query:   151 I--QGSYAQRACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVI 207
             +  +GS    + A+ D   + +AE+K+K+++ G+  G DV  ++V+ +++ +  +GLV+
Sbjct:   167 MVTRGS----SLAIEDNCGKLLAEVKRKQSINGLKLGDDVLTMMVESQVDHSFIIGLVL 221

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2197046 AT1G53880 "AT1G53880" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 7.2e-19, P = 7.2e-19
 Identities = 57/167 (34%), Positives = 90/167 (53%)

Query:    36 TVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGD 95
             T+W +SL+F+  G TVFDSKG+L++RVDNY      E+ LMD  GK L T+R+K+L L  
Sbjct:    33 TIWMRSLVFHSKGCTVFDSKGNLIYRVDNYNSKSCSEVYLMDLYGKILFTLRQKKLGLFK 92

Query:    96 NWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDGXXXXXPTNNKNVLYEIQGSY 155
             +W  Y+   T    RF ++K+  IL     +      G          +    Y+I    
Sbjct:    93 SWKGYNSTGT----RFQLRKNFKILPKGSSSSYKVVMGSRIVD----GDHQSCYKIVKR- 143

Query:   156 AQRACAVYDGRRRRVAEIKKKEA-VGGVAFGSDVFRLIVQPEMETAV 201
              +    + DG  R +AE+KKK++ +  +  G DV  ++V+P++ET +
Sbjct:   144 -KSVFTIEDGSGRLLAEVKKKQSNIKSLDLGKDVLTMMVEPQLETEI 189

GO:0003743 "translation initiation factor activity" evidence=ISS;IBA

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IBA

GO:0005525 "GTP binding" evidence=ISS

GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=ISS;IBA

GO:0006413 "translational initiation" evidence=ISS

GO:0006446 "regulation of translational initiation" evidence=IBA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050790 "regulation of catalytic activity" evidence=IBA

TAIR|locus:2814880 AT1G53900 "AT1G53900" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 7.2e-19, P = 7.2e-19
 Identities = 57/167 (34%), Positives = 90/167 (53%)

Query:    36 TVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGD 95
             T+W +SL+F+  G TVFDSKG+L++RVDNY      E+ LMD  GK L T+R+K+L L  
Sbjct:    33 TIWMRSLVFHSKGCTVFDSKGNLIYRVDNYNSKSCSEVYLMDLYGKILFTLRQKKLGLFK 92

Query:    96 NWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDGXXXXXPTNNKNVLYEIQGSY 155
             +W  Y+   T    RF ++K+  IL     +      G          +    Y+I    
Sbjct:    93 SWKGYNSTGT----RFQLRKNFKILPKGSSSSYKVVMGSRIVD----GDHQSCYKIVKR- 143

Query:   156 AQRACAVYDGRRRRVAEIKKKEA-VGGVAFGSDVFRLIVQPEMETAV 201
              +    + DG  R +AE+KKK++ +  +  G DV  ++V+P++ET +
Sbjct:   144 -KSVFTIEDGSGRLLAEVKKKQSNIKSLDLGKDVLTMMVEPQLETEI 189

GO:0003743 "translation initiation factor activity" evidence=ISS;IBA

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IBA

GO:0005525 "GTP binding" evidence=ISS

GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=ISS;IBA

GO:0006413 "translational initiation" evidence=ISS

GO:0006446 "regulation of translational initiation" evidence=IBA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050790 "regulation of catalytic activity" evidence=IBA

TAIR|locus:2181082 AT5G01750 "AT5G01750" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 50/179 (27%), Positives = 88/179 (49%)

Query:    35 LTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLG 94
             + + +K +      F + D  G+L+F+V   + G+  + VL+D +G  ++T+R K +S+ 
Sbjct:    40 MAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLREKMVSMH 99

Query:    95 DNWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDGXXXXXPTNNKNVLYEIQGS 154
             D W V+ G  TD        K  ++L  K    V   G +        + K   + ++GS
Sbjct:   100 DRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFL-GHN-------KDEKRCDFRVKGS 151

Query:   155 YAQRACAVYDGRRRR-VAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQM 212
             + +R+C VY G     VA++ +K  V  V  G D F + V P ++ A    LV++LD +
Sbjct:   152 WLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDV 210

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2180459 AT5G20640 "AT5G20640" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 63/201 (31%), Positives = 106/201 (52%)

Query:    28 SDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNY-IQGVKGEIVLMDAAGKSLLTI 86
             S  + TVL V ++  + N  GF V +SK  +VFRVD   + G KG+++L +  G  LL I
Sbjct:    18 SSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGTKGKLLLRNGDGNDLLLI 77

Query:    87 RR-----KRLSLGDN-W--LVYDGEKTDVNPRFSVK--KHVNILTNKCLAHVSCKGGDGX 136
             R+     + L++  N W    YD E T+    F++K  K   ++ N  +  +   G    
Sbjct:    78 RKMGGIVQALNMVHNKWEGFGYDNEGTE-RLVFTLKDPKDSCLVQNSSIK-ILVHGKPPK 135

Query:   137 XXXXPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIK-KKEAVGGVAFGSDVFRLIVQP 195
                  T N  V  EI+GS+A+RAC + D   + +A+++ +KE    V    D++ +IV+P
Sbjct:   136 ISS--TRNNYV--EIKGSFAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVIVKP 191

Query:   196 EMETAVAMGLVILLDQMFGSS 216
              ++ +  +GL+ +LD + G S
Sbjct:   192 NVDQSFIVGLIAILDYIHGES 212

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZVI6	LOR8_ARATH	No assigned EC number	0.5409	0.8687	0.9795	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	221
pfam04525	185	pfam04525, Tub_2, Tubby C 2	6e-54
COG4894	159	COG4894, COG4894, Uncharacterized conserved protei	3e-06

>gnl|CDD|218129 pfam04525, Tub_2, Tubby C 2

 Score =  170 bits (433), Expect = 6e-54
 Identities = 78/184 (42%), Positives = 112/184 (60%), Gaps = 20/184 (10%)

Query: 33  TVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLS 92
             LTVW+KSL+FN +GFTV+DS G+LVFRVD Y  G+  E VLMD++G  LLTIRRK+LS
Sbjct: 14  EDLTVWRKSLVFNGDGFTVYDSNGNLVFRVDGYAFGLSDERVLMDSSGNPLLTIRRKKLS 73

Query: 93  LGDNWLVYDGEKTDV-NPRFSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNN------- 144
           L D W VY GE T+  +P F+V++   +                SS  S  N+       
Sbjct: 74  LHDRWEVYRGEGTEGKDPLFTVRRSSIVQLK-----------TSSSVFSKRNSNVIVDDE 122

Query: 145 KNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMG 204
           KN  ++I+GS+  R+C +YD   + +AE+ K++   GV  G DV+ + V+PE++ A  M 
Sbjct: 123 KNCDFDIKGSFLDRSCKIYDDSDKLIAEV-KRQTSKGVFLGKDVYTVTVKPEVDYAFIMA 181

Query: 205 LVIL 208
           LV++
Sbjct: 182 LVVV 185

The structure of this family has been solved. It comprises a 12-stranded beta barrel with a central C-terminal alpha helix. This helix is thought to be a transmembrane helix. It is structurally similar to the C-terminal domain of the Tubby protein. In plants it plays a role in defense against pathogens. Length = 185

>gnl|CDD|227231 COG4894, COG4894, Uncharacterized conserved protein [Function unknown]

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 28/174 (16%)

Query: 39  KKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWL 98
           K+ +    + F ++D  G+  F+V+     +   + + DA+GK+L++I +K LSL   + 
Sbjct: 11  KQKMFSFGDAFHIYDRDGEEAFKVEGSFFSIGDTLTITDASGKTLVSIEQKLLSLLPRYE 70

Query: 99  VYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQR 158
           + DG  T       V+K V    +K         G               +EI G+    
Sbjct: 71  ISDGGGTV----CEVRKKVTFSRDKFEI-----DGLN-------------WEIHGNIWDD 108

Query: 159 ACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQM 212
              + DG   R AE+ KK          D + L V P+ +  + + + + LD +
Sbjct: 109 EFKLTDGENVR-AEVSKKWFSWR-----DTYHLQVAPDEDALLIIAIAVALDMV 156

Length = 159

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	221
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	100.0
COG4894	159	Uncharacterized conserved protein [Function unknow	100.0
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	99.6
COG4894	159	Uncharacterized conserved protein [Function unknow	98.24
KOG0621	292	consensus Phospholipid scramblase [Cell wall/membr	97.87
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	97.65
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	96.7

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=100.00  E-value=7.3e-45  Score=301.99  Aligned_cols=183  Identities=36%  Similarity=0.539  Sum_probs=109.3

Q ss_pred             CCCCCccCCcceEEEEEEeeeeEeCCCeEEEeCCCCEEEEEEe-ecCCccCeEEEECCCCCeEEEEEeecCCCCCcEEEE
Q 027614           22 PAKPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDN-YIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVY  100 (221)
Q Consensus        22 ~~~~~~~~~~~~~l~v~~K~~~~s~d~ftI~D~~G~~vf~V~g-~~~s~~~~~~l~D~~G~~L~~i~~k~ls~~~~w~v~  100 (221)
                      ++.++||+++|++|+||+|.+++++++|+|+|++|+++|+|+| +.+++++++.|+|++|+||++|++|.++++++|++|
T Consensus         3 vv~~~~~~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~G~~L~~i~~k~~~l~~~w~i~   82 (187)
T PF04525_consen    3 VVDAQYCSPQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDGGKFFSIGKKRTLMDASGNPLFTIRRKLFSLRPTWEIY   82 (187)
T ss_dssp             SS-GGGB-SS-EEEEEE----------EEEEETTS-EEEEEE--SCTTBTTEEEEE-TTS-EEEEEE--------EEEEE
T ss_pred             EECHHHcCCCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEEecccCCCCEEEEECCCCCEEEEEEeeecccceEEEEE
Confidence            5689999999999999999999999999999999999999999 889999999999999999999999999999999999


Q ss_pred             eCCCCCC-cceEEEEeeecccCCceEEEEEecCCCCCCCCCCCCCCceeEEEEeeecCceeEEEeCCCcEEEEEEeeeee
Q 027614          101 DGEKTDV-NPRFSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAV  179 (221)
Q Consensus       101 ~g~~~~~-~~lf~vkk~~s~~~~k~~~~V~~~~~~~~~~~~~~~~~~~~~~v~G~~~~~~~~I~~~~g~~VA~V~rk~~~  179 (221)
                      ++++.++ +++|+||++ +.+..+..+.+|+....   +.....++.++|+|+|+||+++|+|++.+|++||+|+||+..
T Consensus        83 ~~~~~~~~~~i~tvkk~-~~~~~~~~~~~f~~~~~---~~~~~~~~~~~~~i~G~~~~~~~~I~~~~g~~VA~i~rk~~~  158 (187)
T PF04525_consen   83 RGGGSEGKKPIFTVKKK-SMLQNKDSFDVFLPPKS---NISIDDSEGPDFEIKGNFWDRSFTIYDSGGRVVAEISRKYSS  158 (187)
T ss_dssp             ETT---GGGEEEEEE-----------EEEEET--T-------------SEEEES-TTTT--EEEECC--EEEEEEE----
T ss_pred             ECCCCccCceEEEEEEe-cccCCCcceeEEEeccc---ceeecCCCCceEEEEEEecCcEEEEEEcCCCEEEEEecccce
Confidence            9986432 689999998 46677888888886411   000113456799999999999999996558999999998886


Q ss_pred             CceeeccceEEEEEcCCCCHHHHHHHHHh
Q 027614          180 GGVAFGSDVFRLIVQPEMETAVAMGLVIL  208 (221)
Q Consensus       180 ~~~~~g~dtY~v~V~pgvD~alI~alvvi  208 (221)
                      .++++|+|+|.|+|+||+|++||+|||||
T Consensus       159 k~~~~~~dty~l~V~pg~D~~lv~alvvi  187 (187)
T PF04525_consen  159 KKWFSGRDTYTLTVAPGVDQALVVALVVI  187 (187)
T ss_dssp             ------B-SEEEEE-TTSBHHHHHHHHHH
T ss_pred             eeEEecCcEEEEEEcCCCCHHHheeEEeC
Confidence            67888999999999999999999999987

; PDB: 1ZXU_A 2Q4M_A.

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.4e-35  Score=232.41  Aligned_cols=153  Identities=25%  Similarity=0.413  Sum_probs=139.0

Q ss_pred             eEEEEEEeeeeEeCCCeEEEeCCCCEEEEEEeecCCccCeEEEECCCCCeEEEEEeecCCCCCcEEEEeCCCCCCcceEE
Q 027614           33 TVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFS  112 (221)
Q Consensus        33 ~~l~v~~K~~~~s~d~ftI~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~~L~~i~~k~ls~~~~w~v~~g~~~~~~~lf~  112 (221)
                      .+|.++||..++ ||+|.|+|.+|+.+|+|+|+.+++++.+++.|++|.+|.+|++|+++++|+|++-.|++    -+|.
T Consensus         6 ~tl~mkQk~~~~-gd~f~I~d~dgE~af~VeGs~f~i~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~g----~~~~   80 (159)
T COG4894           6 ITLFMKQKMFSF-GDAFHIYDRDGEEAFKVEGSFFSIGDTLTITDASGKTLVSIEQKLLSLLPRYEISDGGG----TVCE   80 (159)
T ss_pred             HhHhhhhhhhhc-ccceEEECCCCcEEEEEeeeEEeeCceEEEEecCCCChHHHHHHHhhccceeEEEcCCC----CEEE
Confidence            467788887777 79999999999999999999999999999999999999999999999999999999983    4899


Q ss_pred             EEeeecccCCceEEEEEecCCCCCCCCCCCCCCceeEEEEeeecCceeEEEeCCCcEEEEEEeeeeeCceeeccceEEEE
Q 027614          113 VKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRRVAEIKKKEAVGGVAFGSDVFRLI  192 (221)
Q Consensus       113 vkk~~s~~~~k~~~~V~~~~~~~~~~~~~~~~~~~~~~v~G~~~~~~~~I~~~~g~~VA~V~rk~~~~~~~~g~dtY~v~  192 (221)
                      ++|++++++  .++++  ++              .+|+++||+|+.+|++.+| ++++|+|+|||+.     |+|||.|+
T Consensus        81 vrKK~tf~R--dk~e~--d~--------------~~~eihGNi~d~efkl~dg-~~~~aeVsKkwf~-----~rdTY~l~  136 (159)
T COG4894          81 VRKKVTFSR--DKFEI--DG--------------LNWEIHGNIWDDEFKLTDG-ENVRAEVSKKWFS-----WRDTYHLQ  136 (159)
T ss_pred             EEEEEEEEe--eeEEE--cC--------------CCeEEecceeceEEEEecC-CceehhheeeeEe-----ccceEEEE
Confidence            999987764  43455  33              4599999999999999998 6799999999999     99999999


Q ss_pred             EcCCCCHHHHHHHHHhhhhccC
Q 027614          193 VQPEMETAVAMGLVILLDQMFG  214 (221)
Q Consensus       193 V~pgvD~alI~alvvilD~i~~  214 (221)
                      |+|+.|.++|++++|++|++.+
T Consensus       137 vapde~a~lii~i~VaLD~v~~  158 (159)
T COG4894         137 VAPDEDALLIIAIAVALDMVLY  158 (159)
T ss_pred             EcCchhhHHHHHHHHHHHHHhc
Confidence            9999999999999999999875

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=99.60  E-value=1.7e-13  Score=116.24  Aligned_cols=165  Identities=17%  Similarity=0.187  Sum_probs=125.1

Q ss_pred             EEEEEEeeeeE-------eCCCeEEEeCCCCEEEEEEeecC---------CccCeEEEECCCCCeEEEEEeecCC-----
Q 027614           34 VLTVWKKSLLF-------NCNGFTVFDSKGDLVFRVDNYIQ---------GVKGEIVLMDAAGKSLLTIRRKRLS-----   92 (221)
Q Consensus        34 ~l~v~~K~~~~-------s~d~ftI~D~~G~~vf~V~g~~~---------s~~~~~~l~D~~G~~L~~i~~k~ls-----   92 (221)
                      .+.|+|+...+       ..+.|.|+|.+|+.+|.+....-         ...-++.++|..|+++++|+|..--     
T Consensus        23 ~l~I~Q~~e~~e~~~~~e~~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~Rp~~c~~C~~  102 (221)
T PF03803_consen   23 QLLIKQQIEPLEIFTGFETPNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIERPFKCCSCCP  102 (221)
T ss_pred             EEEEEEEEEEeceecccccCceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEcCCcceeccc
Confidence            45566666532       25799999999999999876531         2245678999999999999996421     


Q ss_pred             -CCCcEEEEeCCCCCCcceEEEEeeecccCCceEEEEEecCCCCCCCCCCCCCCceeEEEEee------ecCceeEEEeC
Q 027614           93 -LGDNWLVYDGEKTDVNPRFSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGS------YAQRACAVYDG  165 (221)
Q Consensus        93 -~~~~w~v~~g~~~~~~~lf~vkk~~s~~~~k~~~~V~~~~~~~~~~~~~~~~~~~~~~v~G~------~~~~~~~I~~~  165 (221)
                       ...+.+|+.+.   ++++.+|++++++++++  ++|+.++            +..-+.|+|.      +.+.+|.|++.
T Consensus       103 ~~~~~~~V~~p~---g~~iG~I~q~~~~~~~~--f~I~d~~------------~~~~~~I~gp~~~~~~~~~~~F~I~~~  165 (221)
T PF03803_consen  103 CCLQEMEVESPP---GNLIGSIRQPFSCCRPN--FDIFDAN------------GNPIFTIKGPCCCCSCCCDWEFEIKDP  165 (221)
T ss_pred             ccceeEEEecCC---CcEEEEEEEcCcccceE--EEEEECC------------CceEEEEeCCcceeccccceeeeeecc
Confidence             12455665544   48999999998777644  6887543            2367899997      45788999997


Q ss_pred             CCcEEEEEEeeeeeC--ceeeccceEEEEEcCCCCH---HHHHHHHHhhhhccCC
Q 027614          166 RRRRVAEIKKKEAVG--GVAFGSDVFRLIVQPEMET---AVAMGLVILLDQMFGS  215 (221)
Q Consensus       166 ~g~~VA~V~rk~~~~--~~~~g~dtY~v~V~pgvD~---alI~alvvilD~i~~~  215 (221)
                      +|+.||+|+|+|..-  ...-..|.|.|+..+..|.   ++++|.++.||.++=+
T Consensus       166 ~~~~vg~I~k~w~G~~~e~~t~~d~f~i~Fp~~l~~~~Kalll~a~~liD~~~Fe  220 (221)
T PF03803_consen  166 NGQEVGSITKKWSGFCRELFTDADNFVIEFPPDLDVEQKALLLGAAFLIDYMYFE  220 (221)
T ss_pred             cCcEEEEEEEecCCcchhhccccceEEEEcCCCCCHHHHHHHHHHHHHhhhhhhc
Confidence            789999999999752  2344689999999999886   6999999999998643

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=98.24  E-value=3.1e-06  Score=67.30  Aligned_cols=70  Identities=13%  Similarity=0.207  Sum_probs=61.0

Q ss_pred             CCcceEEEEEEeeeeEeCCCeEEEeCCCCEEEEEEeecCCccCeEEEECCCCCeEEEEEeecCCCCCcEEEE
Q 027614           29 DANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVY  100 (221)
Q Consensus        29 ~~~~~~l~v~~K~~~~s~d~ftI~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~~L~~i~~k~ls~~~~w~v~  100 (221)
                      ...++.+.|.-+.++. +|.|+|+|+.|.+++.++.+..++..+..|-|++|+ ++.+++|...++++|++-
T Consensus        26 ~dgE~af~VeGs~f~i-~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~g~-~~~vrKK~tf~Rdk~e~d   95 (159)
T COG4894          26 RDGEEAFKVEGSFFSI-GDTLTITDASGKTLVSIEQKLLSLLPRYEISDGGGT-VCEVRKKVTFSRDKFEID   95 (159)
T ss_pred             CCCcEEEEEeeeEEee-CceEEEEecCCCChHHHHHHHhhccceeEEEcCCCC-EEEEEEEEEEEeeeEEEc
Confidence            4568889997655555 899999999999999999999999999999999999 899999977678888864

>KOG0621 consensus Phospholipid scramblase [Cell wall/membrane/envelope biogenesis]

Probab=97.87  E-value=0.00042  Score=61.54  Aligned_cols=157  Identities=17%  Similarity=0.157  Sum_probs=101.5

Q ss_pred             CCCeEEEeCCCCEEEEEEeecC---------CccCeEEEECCCCCeEEEEEeecCCCCC------cEEEEeCCCCCCcce
Q 027614           46 CNGFTVFDSKGDLVFRVDNYIQ---------GVKGEIVLMDAAGKSLLTIRRKRLSLGD------NWLVYDGEKTDVNPR  110 (221)
Q Consensus        46 ~d~ftI~D~~G~~vf~V~g~~~---------s~~~~~~l~D~~G~~L~~i~~k~ls~~~------~w~v~~g~~~~~~~l  110 (221)
                      .+.|.|.|.+|+.+|.+-...-         ...-...++|.-|+++++++|...-...      ..++-. .......+
T Consensus        98 ~NRY~v~~~~g~~v~~~~E~S~~~~Rq~~g~~RpF~~~i~D~~g~eVl~~~R~~~c~~~~c~~~~~~~~~v-~~p~~~~l  176 (292)
T KOG0621|consen   98 ANRYVVHDMYGQPLYYAMERSNVFARQYLGTHRPFAMRIMDNFGQEVLTCKRPFPCCSSACALCLAQEIEI-QSPPMGLL  176 (292)
T ss_pred             CcEEEEEcCCcChhHHHHhhchHHHHHhhccCCcceeEeecccCcEEEEEeccccccccccccccccEEEE-EcCCCceE
Confidence            6899999999999885544321         3456789999999999999998532221      011111 11112455


Q ss_pred             EEEEeeecccCCceEEEEEecCCCCCCCCCCCCCCceeEEEEee-e------cCceeEEEeC-CCcEEEEEEeeeeeC--
Q 027614          111 FSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGS-Y------AQRACAVYDG-RRRRVAEIKKKEAVG--  180 (221)
Q Consensus       111 f~vkk~~s~~~~k~~~~V~~~~~~~~~~~~~~~~~~~~~~v~G~-~------~~~~~~I~~~-~g~~VA~V~rk~~~~--  180 (221)
                      -+|.+.+....++  ++|...            .....|.|+|. +      -+..|.|... +|++|++|.|+|..-  
T Consensus       177 G~v~q~~~~~~~~--f~i~~~------------~~~~v~~v~gp~~~~~~~~~d~~f~~~~~d~~~~vg~I~k~w~g~~r  242 (292)
T KOG0621|consen  177 GKVLQTWGCVNPN--FHLWDR------------DGNLVFLVEGPRCCTFACCDDTVFFPKTTDNGRIVGSISRKWAGLVR  242 (292)
T ss_pred             EEEEEeeccccce--EEEEcc------------cceeEEEEEcCceeEEEeecCcceeEEEcCCCeEEEEEeecccchhh
Confidence            5566654444444  344321            12256777775 2      3344444443 488999999999873  


Q ss_pred             ceeeccceEEEEEcCCCCH---HHHHHHHHhhhhccCCCC
Q 027614          181 GVAFGSDVFRLIVQPEMET---AVAMGLVILLDQMFGSSG  217 (221)
Q Consensus       181 ~~~~g~dtY~v~V~pgvD~---alI~alvvilD~i~~~~~  217 (221)
                      ..+-..|+|.|.-.-..|.   ++++|.+.-||.++=+++
T Consensus       243 E~fTDad~f~v~FPldLdvk~kavllga~flID~~~Fe~~  282 (292)
T KOG0621|consen  243 EAFTDADTFVVHFPLDLDVKLKALLLGSTFLIDYMSFESR  282 (292)
T ss_pred             hheeccceeeEecCCcCCHHHHhhhhhheeeEEEEEEecC
Confidence            3444678999988877775   688999999998766554

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=97.65  E-value=0.00042  Score=57.38  Aligned_cols=96  Identities=18%  Similarity=0.299  Sum_probs=49.8

Q ss_pred             CCcceEEEEEE-eeeeEeCCCeEEEeCCCCEEEEEEeecCCccCeEEEECCCCCe----EEEEEee-cCCCCCcEEEEeC
Q 027614           29 DANATVLTVWK-KSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKS----LLTIRRK-RLSLGDNWLVYDG  102 (221)
Q Consensus        29 ~~~~~~l~v~~-K~~~~s~d~ftI~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~~----L~~i~~k-~ls~~~~w~v~~g  102 (221)
                      ......|+|.. +.+++ ++...++|.+|++++++.-+.+++.++..+++++++.    +++|+++ .+..++.-.+|..
T Consensus        35 ~~G~~vf~V~g~~~~s~-~~~~~l~D~~G~~L~~i~~k~~~l~~~w~i~~~~~~~~~~~i~tvkk~~~~~~~~~~~~f~~  113 (187)
T PF04525_consen   35 ENGNVVFRVDGGKFFSI-GKKRTLMDASGNPLFTIRRKLFSLRPTWEIYRGGGSEGKKPIFTVKKKSMLQNKDSFDVFLP  113 (187)
T ss_dssp             TTS-EEEEEE--SCTTB-TTEEEEE-TTS-EEEEEE--------EEEEEETT---GGGEEEEEE----------EEEEET
T ss_pred             CCCCEEEEEEEecccCC-CCEEEEECCCCCEEEEEEeeecccceEEEEEECCCCccCceEEEEEEecccCCCcceeEEEe
Confidence            34578899988 56666 6899999999999999999999999999999999985    9999999 4555666667765


Q ss_pred             CC------CCCcceEEEEeeecccCCceEEEEE
Q 027614          103 EK------TDVNPRFSVKKHVNILTNKCLAHVS  129 (221)
Q Consensus       103 ~~------~~~~~lf~vkk~~s~~~~k~~~~V~  129 (221)
                      ..      ..+.+-++|+-.  ++...  ++|+
T Consensus       114 ~~~~~~~~~~~~~~~~i~G~--~~~~~--~~I~  142 (187)
T PF04525_consen  114 PKSNISIDDSEGPDFEIKGN--FWDRS--FTIY  142 (187)
T ss_dssp             --T----------SEEEES---TTTT----EEE
T ss_pred             cccceeecCCCCceEEEEEE--ecCcE--EEEE
Confidence            21      112566777776  33433  3555

; PDB: 1ZXU_A 2Q4M_A.

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=96.70  E-value=0.031  Score=47.19  Aligned_cols=64  Identities=20%  Similarity=0.367  Sum_probs=44.8

Q ss_pred             EEEeCCCCEEEEEEeecCC------ccCeEEEECCCCCeEEEEEeecCCCCCcEEEEeCCCCCCcceEEEEee
Q 027614           50 TVFDSKGDLVFRVDNYIQG------VKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVNPRFSVKKH  116 (221)
Q Consensus        50 tI~D~~G~~vf~V~g~~~s------~~~~~~l~D~~G~~L~~i~~k~ls~~~~w~v~~g~~~~~~~lf~vkk~  116 (221)
                      .|+|..|+.|++++-...-      ...+..+.++.|+.|.+|+++.-.+.++++|+..++   +++++|+..
T Consensus        79 ~i~D~~g~~vl~i~Rp~~c~~C~~~~~~~~~V~~p~g~~iG~I~q~~~~~~~~f~I~d~~~---~~~~~I~gp  148 (221)
T PF03803_consen   79 HIYDNYGREVLTIERPFKCCSCCPCCLQEMEVESPPGNLIGSIRQPFSCCRPNFDIFDANG---NPIFTIKGP  148 (221)
T ss_pred             EEEecCCCEEEEEEcCCcceecccccceeEEEecCCCcEEEEEEEcCcccceEEEEEECCC---ceEEEEeCC
Confidence            5778888888888764321      135677778888888888877655677888887663   567777765

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	221
1zxu_A	217	X-Ray Structure Of Protein From Arabidopsis Thalian		4e-14

>pdb|1ZXU|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g01750 Length = 217

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 49  FTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTDVN 108
           F + D  G+L+F+V   + G+  + VL+D +G  ++T+R K +S  D W V+ G  TD  
Sbjct: 54  FVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLREKXVSXHDRWQVFRGGSTDQR 113
Query: 109 PRFSVKKHVNILTNKCLAHVSCKGGDGXXXXXPTNNKNVLYEIQGSYAQRACAVYDGRRR 168
                 K  + L  K    V              + K   + ++GS+ +R+C VY G   
Sbjct: 114 DLLYTVKRSSXLQLKTKLDVFLGHN--------KDEKRCDFRVKGSWLERSCVVYAGESD 165
Query: 169 R-VAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQM 212
             VA+  +K  V  V  G D F + V P ++ A    LV++LD +
Sbjct: 166 AIVAQXHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDV 210
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	221
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	5e-56

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A Length = 217

 Score =  176 bits (448), Expect = 5e-56
 Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 16/223 (7%)

Query: 1   MTKVYPNANVAAAATATAPSIPAKPQASDAN-----ATVLTVWKKSLLFNCNGFTVFDSK 55
           M + Y  A    +  + AP+  A     D          + + +K +      F + D  
Sbjct: 1   MEQPYVYAYPQGSGPSGAPTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVN 60

Query: 56  GDLVFRVDNYIQGVKGEIVLMDAAGKSLLTIRRKRLSLGDNWLVYDGEKTD-VNPRFSVK 114
           G+L+F+V   + G+  + VL+D +G  ++T+R K +S+ D W V+ G  TD  +  ++VK
Sbjct: 61  GNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVK 120

Query: 115 KHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACAVYDGRRRR-VAEI 173
           +   +     L                 + K   + ++GS+ +R+C VY G     VA++
Sbjct: 121 RSSMLQLKTKLDVF---------LGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQM 171

Query: 174 KKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSS 216
            +K  V  V  G D F + V P ++ A    LV++LD +    
Sbjct: 172 HRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNRED 214

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	221
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	100.0
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	97.97

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=100.00  E-value=5.7e-44  Score=301.63  Aligned_cols=205  Identities=26%  Similarity=0.489  Sum_probs=145.0

Q ss_pred             ecCCCCcccccccCCCCCCC-CCCccCCcceEEEEEEeeeeEeCCCeEEEeCCCCEEEEEEeecCCccCeEEEECCCCCe
Q 027614            4 VYPNANVAAAATATAPSIPA-KPQASDANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGKS   82 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~v~~K~~~~s~d~ftI~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~~   82 (221)
                      .||+.+.|+..+|.+++.+| .|+||++++++|+||+|.++|++++|+|+|++|+++|+|+|+.++++.++.|+|++|++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~vkqk~~~~~~~~f~V~D~~G~~vf~V~~~~~~~~~~~~l~D~~G~~   87 (217)
T 1zxu_A            8 AYPQGSGPSGAPTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTP   87 (217)
T ss_dssp             ----------------CCCSSCGGGBCSSCEEEEEECC-----CCCEEEEETTSCEEEEEECSSTTCCSEEEEECTTSCE
T ss_pred             eCCCCCCCCCCCCCCCcEEEECccccCCCCcEEEEEEEEeEeeCCCEEEEeCCCCEEEEEEccccCCCCEEEEECCCCCE
Confidence            57888888887777777744 69999999999999999999988899999999999999999988999999999999999


Q ss_pred             EEEEEeecCCCCCcEEEEeCCCCCC-cceEEEEeeecccCCceEEEEEecCCCCCCCCCCCCCCceeEEEEeeecCceeE
Q 027614           83 LLTIRRKRLSLGDNWLVYDGEKTDV-NPRFSVKKHVNILTNKCLAHVSCKGGDGSSSSSPTNNKNVLYEIQGSYAQRACA  161 (221)
Q Consensus        83 L~~i~~k~ls~~~~w~v~~g~~~~~-~~lf~vkk~~s~~~~k~~~~V~~~~~~~~~~~~~~~~~~~~~~v~G~~~~~~~~  161 (221)
                      |++|++|.++++++|++|++++.++ +++|+||++. +++.+..++|++++..        .++.++|+|+|+|++++|+
T Consensus        88 l~~i~rk~~~~~~~~~v~~~~~~~~~~~i~~vrk~~-~~~~~~~~~V~~~~~~--------~~~~~~~~I~G~~~~~~f~  158 (217)
T 1zxu_A           88 VVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSS-MLQLKTKLDVFLGHNK--------DEKRCDFRVKGSWLERSCV  158 (217)
T ss_dssp             EEEEEC------CEEEEEETTCCCGGGEEEEEEC--------CCEEEEETTCC--------C-CCCSEEEESCTTTTCCE
T ss_pred             EEEEEccccccCcEEEEEcCCCCCCCcEEEEEEEec-cccCCCeEEEEECCCC--------CCCceEEEEEEeEeCCEEE
Confidence            9999999999999999999885432 5899999982 2334556788876511        2345789999999999999


Q ss_pred             EEeCC-CcEEEEEEeeeeeCceeeccceEEEEEcCCCCHHHHHHHHHhhhhccCCCC
Q 027614          162 VYDGR-RRRVAEIKKKEAVGGVAFGSDVFRLIVQPEMETAVAMGLVILLDQMFGSSG  217 (221)
Q Consensus       162 I~~~~-g~~VA~V~rk~~~~~~~~g~dtY~v~V~pgvD~alI~alvvilD~i~~~~~  217 (221)
                      |++++ |++||+|+|||...++++|+|+|.|+|.||+|.+||||+|++||+++.+++
T Consensus       159 I~~~~~~~~Va~I~kk~~~~~~~~~~D~y~l~V~p~~D~aliialvv~iD~~~~~~~  215 (217)
T 1zxu_A          159 VYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNREDR  215 (217)
T ss_dssp             EEETTTCCEEEEEEEC--------CBCSEEEEECTTSBHHHHHHHHHHHHHHHC---
T ss_pred             EEECCCCEEEEEEEeeeeccccccCCcEEEEEECCCCCHHHHHHHHHHHHHhhhhcc
Confidence            99986 799999999976667888999999999999999999999999999998875

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=97.97  E-value=5.3e-05  Score=62.97  Aligned_cols=98  Identities=18%  Similarity=0.249  Sum_probs=66.9

Q ss_pred             CCcceEEEEEEeeeeEeCCCeEEEeCCCCEEEEEEeecCCccCeEEEECCCCC----eEEEEEeec-CCCCCcEEEEeCC
Q 027614           29 DANATVLTVWKKSLLFNCNGFTVFDSKGDLVFRVDNYIQGVKGEIVLMDAAGK----SLLTIRRKR-LSLGDNWLVYDGE  103 (221)
Q Consensus        29 ~~~~~~l~v~~K~~~~s~d~ftI~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~----~L~~i~~k~-ls~~~~w~v~~g~  103 (221)
                      ......|+|..+.+++ ++.+.|+|.+|++++++..+.+++..+..++++.+.    +|++|+++. +++++.|+|+.++
T Consensus        59 ~~G~~vf~V~~~~~~~-~~~~~l~D~~G~~l~~i~rk~~~~~~~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~~  137 (217)
T 1zxu_A           59 VNGNLLFKVKEPVFGL-HDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGH  137 (217)
T ss_dssp             TTSCEEEEEECSSTTC-CSEEEEECTTSCEEEEEEC------CEEEEEETTCCCGGGEEEEEEC-------CCEEEEETT
T ss_pred             CCCCEEEEEEccccCC-CCEEEEECCCCCEEEEEEccccccCcEEEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEECC
Confidence            3457889998875555 689999999999999999998899999999999875    799999983 5689999999875


Q ss_pred             CCCC-cceEEEEeeecccCCceEEEEEec
Q 027614          104 KTDV-NPRFSVKKHVNILTNKCLAHVSCK  131 (221)
Q Consensus       104 ~~~~-~~lf~vkk~~s~~~~k~~~~V~~~  131 (221)
                      .+.+ .+.++|+-.  ++...+  +|...
T Consensus       138 ~~~~~~~~~~I~G~--~~~~~f--~I~~~  162 (217)
T 1zxu_A          138 NKDEKRCDFRVKGS--WLERSC--VVYAG  162 (217)
T ss_dssp             CCC-CCCSEEEESC--TTTTCC--EEEET
T ss_pred             CCCCCceEEEEEEe--EeCCEE--EEEEC
Confidence            3322 567888765  444444  66643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	221
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	2e-55

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	221
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	100.0
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	97.74