Citrus Sinensis ID: 027676

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Protein Sequence
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccEEEEEEEccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEccccccccEEEEEEEcccccccccccccEEEEEEcHHHccccEEEEcccccccEEEEEEccccccccEEEEEEccccccccccccccEEEEEEccHHHHHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEccccHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHcccccccEEEEEEEcccHHHHHHHHHHHHccHHEEccccccccEEEEEEEcccccccEEEEEEEEcccccEccccccEEEEEEcHHHHHHHEEEEccccccccEEEEEEEcccccccEEEEEEccccccccccccEEEEEEccHHHHHHHHHHHHHHHHcccEEEEcccccccccEEEEEEEcccccEEEEEEcccHHHHHHcc
Coil and Loop (DISEMBL)
MAEASPAAANAELLewpkkdkrrFLHAVYRVGDLDRTIKFYTECFGmkllrkrdvpeekysnaflgfgpeqSHFVVELTYNygvtsydigtgfgHFAIATEDALGMKLLrtvdkpeyKYTLAMLGYAEEDQTTVLELTYNygvteytkgnAYAQVAISTDDVYKSAEVVNLVTQELggkitrqpgsipglntkitsfvdpdgwktvLVDNEDFLKEIQSE
Flexible Loop (DISEMBL)
MAEASPAAANAellewpkkdkrrfLHAVyrvgdldrtiKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQelggkitrqpgsipglnTKITsfvdpdgwktVLVDNEDFLKEIQSE
Low Complexity Region (SEG)
MaeaspaaanaelleWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Disordered region (IsUnstruct)
*************LEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL******
Disordered Region (DISOPRED)
******A*ANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE**L******
Disordered Region (DISEMBL)
*********NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Disordered Region (DISPRO)
**********AELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	220	2.2.26 [Sep-21-2011]
Q948T6	291	Lactoylglutathione lyase	yes	no	0.531	0.402	0.813	5e-51
Q39366	282	Putative lactoylglutathio	N/A	no	0.445	0.347	0.858	3e-47
Q8W593	350	Probable lactoylglutathio	no	no	0.518	0.325	0.686	2e-42
Q9KT93	138	Probable lactoylglutathio	yes	no	0.472	0.753	0.472	3e-23
P44638	135	Lactoylglutathione lyase	yes	no	0.486	0.792	0.459	1e-22
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.35	0.570	0.567	5e-22
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.35	0.570	0.567	5e-22
P0AC83	135	Lactoylglutathione lyase	yes	no	0.35	0.570	0.555	2e-21
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.35	0.570	0.555	2e-21
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.35	0.570	0.555	2e-21

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  200 bits (509), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 96/118 (81%), Positives = 106/118 (89%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E ALGMKLLR  D P+YKYT+AMLGYA+ED+TTV+ELTYNYGVTEYTKGNAYAQVAI T+
Sbjct: 174 EKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTE 233

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 218
           DVYKSAE V LVT+ELGGKI RQPG +PGLNTKI SF+DPDGWK VLVDN DFLKE+Q
Sbjct: 234 DVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  188 bits (477), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 85/99 (85%), Positives = 93/99 (93%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF 67
           A NA+L+EWPKKDKRRFLH VYRVGDLDRTI+FYTECFGMK+LRKRDVPEEKYSNAFLGF
Sbjct: 2   AENADLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGF 61

Query: 68  GPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGM 106
           GPE S+FVVELTYNYGV+SYDIGTGFGHFAI+T+D   M
Sbjct: 62  GPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKM 100

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica oleracea var. gemmifera (taxid: 178616)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  172 bits (435), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/118 (68%), Positives = 97/118 (82%), Gaps = 4/118 (3%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E A GM+LLRT D PEYKYT+AM+GY  ED+  VLELTYNYGVTEY KGNAYAQ+AI TD
Sbjct: 237 EKAFGMELLRTRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTD 296

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 218
           DVYK+AE + L     GGKITR+PG +PG++TKIT+ +DPDGWK+V VDN DFLKE++
Sbjct: 297 DVYKTAEAIKL----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9KT93|LGUL_VIBCH Probable lactoylglutathione lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=gloA PE=3 SV=2

 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 69/108 (63%), Gaps = 4/108 (3%)

Query: 104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY 163
           +GM LLR  +  EYKYTLA LGY +E Q  V+ELTYN+GV +Y KGNAY  +AI  DD+Y
Sbjct: 27  MGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDDIY 86

Query: 164 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 211
            + + +    +  GG +TR+PG + G  T I    DPDG+   L+ N+
Sbjct: 87  ATCDTI----KAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQNK 130

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P44638|LGUL_HAEIN Lactoylglutathione lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gloA PE=1 SV=1

 Score =  106 bits (265), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 4/111 (3%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           +D LGM+LLRT + PEYKYTLA LGY + +    +ELTYN+GV +Y  G AY  +AI  D
Sbjct: 21  QDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVD 80

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 211
           D+Y + E V    +  GG +TR+ G + G +T I    DPDG+K   ++N+
Sbjct: 81  DIYATCEAV----RASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENK 127

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  104 bits (260), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 59/81 (72%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDA 103
           GV SYD+G  +GH A++ ++A
Sbjct: 62  GVESYDMGNAYGHIALSVDNA 82

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  104 bits (260), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 59/81 (72%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDA 103
           GV SYD+G  +GH A++ ++A
Sbjct: 62  GVESYDMGNAYGHIALSVDNA 82

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  102 bits (255), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 60/81 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDA 103
           GV  Y++GT +GH A++ ++A
Sbjct: 62  GVDKYELGTAYGHIALSVDNA 82

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  102 bits (255), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 60/81 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDA 103
           GV  Y++GT +GH A++ ++A
Sbjct: 62  GVDKYELGTAYGHIALSVDNA 82

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  102 bits (255), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 60/81 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDA 103
           GV  Y++GT +GH A++ ++A
Sbjct: 62  GVDKYELGTAYGHIALSVDNA 82

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
359494140	352	PREDICTED: LOW QUALITY PROTEIN: putative	1.0	0.625	0.487	7e-64
2213425	291	hypothetical protein [Citrus x paradisi]	0.527	0.398	0.991	8e-61
358344718	390	Lactoylglutathione lyase [Medicago trunc	0.972	0.548	0.446	7e-58
224078584	294	predicted protein [Populus trichocarpa]	0.536	0.401	0.875	8e-55
359483362	292	PREDICTED: lactoylglutathione lyase [Vit	0.527	0.397	0.85	1e-53
388493080	274	unknown [Medicago truncatula]	0.518	0.416	0.847	1e-52
356555674	287	PREDICTED: putative lactoylglutathione l	0.527	0.404	0.830	6e-52
356531939	296	PREDICTED: putative lactoylglutathione l	0.527	0.391	0.822	1e-51
211906514	289	lactoylglutathione lyase [Gossypium hirs	0.518	0.394	0.822	6e-51
356520071	303	PREDICTED: putative lactoylglutathione l	0.518	0.376	0.813	1e-49

>gi|359494140|ref|XP_003634727.1| PREDICTED: LOW QUALITY PROTEIN: putative lactoylglutathione lyase-like [Vitis vinifera]

 Score =  249 bits (635), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 136/279 (48%), Positives = 163/279 (58%), Gaps = 59/279 (21%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAE    A   +LLEW +KD RRFLHAVYRVGD+DR IKFYTECFGMK+LRK+D PEEKY
Sbjct: 73  MAETRKFAPGDDLLEWVQKDNRRFLHAVYRVGDIDRAIKFYTECFGMKVLRKQDFPEEKY 132

Query: 61  SNAFLGFGPEQSHFVVELTYN--------------------YGVTSYDIGTGFGHFAI-- 98
           S A LGFGPE+SHFV EL Y                      GV + +     G   I  
Sbjct: 133 STAALGFGPEKSHFVAELIYCDISHQIKGKVYKLTEVVRAYGGVATREPAAAEGGTTIYA 192

Query: 99  ----------------ATEDALGMKLLRTVD---------------------KPEYKYTL 121
                           +T + L   +LR  D                      P   YT+
Sbjct: 193 FVEDSEGYSWELIQNGSTPEPLCQMMLRVADLDLSIKFCEQALGMKLLLKYDNPRENYTM 252

Query: 122 AMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT 181
           AM+GY E ++T VLEL Y Y VTEYTKGN + +VA+STDDVYKSA  V LV++ELGGKI 
Sbjct: 253 AMVGYGEMNETIVLELIYTYNVTEYTKGNGFIEVAVSTDDVYKSAAAVLLVSKELGGKII 312

Query: 182 RQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 220
           + PG IP +N K+TSFVDPD WK VL+DNEDFLK++Q +
Sbjct: 313 QPPGPIPVINAKMTSFVDPDDWKIVLIDNEDFLKQLQKK 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2213425|emb|CAB09799.1| hypothetical protein [Citrus x paradisi]

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 119/120 (99%), Positives = 119/120 (99%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD
Sbjct: 172 EKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 231

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 220
           DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Sbjct: 232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358344718|ref|XP_003636434.1| Lactoylglutathione lyase [Medicago truncatula] gi|355502369|gb|AES83572.1| Lactoylglutathione lyase [Medicago truncatula]

 Score =  229 bits (584), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 138/309 (44%), Positives = 168/309 (54%), Gaps = 95/309 (30%)

Query: 1   MAEASPAAANAE----LLEWPKKDKRRFLHAVYRVGDLDRTI----------------KF 40
           +AEA+ A   A+    L  W + D RRFLH VY+VGDLD+TI                +F
Sbjct: 86  IAEANAAVNLAQPDQNLFNWVQNDNRRFLHVVYKVGDLDKTINCFHKLFQTNSLVKFHRF 145

Query: 41  YTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT 100
           YTEC GMKLLRKRD+PE+KYSNAFLG+GPE S F VELTYNYGV +YDIGTGFGHF I  
Sbjct: 146 YTECLGMKLLRKRDIPEDKYSNAFLGYGPEDSSFTVELTYNYGVDNYDIGTGFGHFGIIA 205

Query: 101 ED---------ALGMKLLR-------------TVDKPE-YKYTL------------AMLG 125
           ED         A G K+ R             +V+ P  Y++ L             ML 
Sbjct: 206 EDVSKTVDIVKAKGGKVTREPGSVKGGSIVTASVEDPSGYRFELLERRPTREPLCKVMLR 265

Query: 126 YAE-----------------------EDQTTVLELTY-------------NYGVTEYTKG 149
             +                       E++ TV +L Y             NYGVT Y KG
Sbjct: 266 VGDLDRVIAFYEKAVGMKLLHKIDNPEEKYTVAKLGYGPEANGPVLQLTYNYGVTNYDKG 325

Query: 150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD 209
           N YAQ+AI TDDVYK+AE +    +  GGKI R+PG +PG+NTKI   +DPDGWK V VD
Sbjct: 326 NGYAQIAIGTDDVYKTAEAI----KSCGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVD 381

Query: 210 NEDFLKEIQ 218
           N DFLKE++
Sbjct: 382 NVDFLKELE 390

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078584|ref|XP_002305564.1| predicted protein [Populus trichocarpa] gi|222848528|gb|EEE86075.1| predicted protein [Populus trichocarpa]

 Score =  219 bits (557), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 105/120 (87%), Positives = 114/120 (95%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E ALGMKLLR +D+PEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAISTD
Sbjct: 174 EKALGMKLLRKIDRPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTD 233

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 220
           DVYKSAEVVNLVTQELGGKITRQPG IPG+NTKITSF+DPDGWK+VLVDNEDFLKE+  E
Sbjct: 234 DVYKSAEVVNLVTQELGGKITRQPGPIPGINTKITSFLDPDGWKSVLVDNEDFLKELHKE 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483362|ref|XP_002273346.2| PREDICTED: lactoylglutathione lyase [Vitis vinifera] gi|302144130|emb|CBI23235.3| unnamed protein product [Vitis vinifera]

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 102/120 (85%), Positives = 113/120 (94%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E ALGMK+++  D+PEYKY++AM+GYAEE +TTVLELTYNYGVTEYTKGNAYAQVAISTD
Sbjct: 172 EKALGMKMVKKTDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTD 231

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 220
           DVYKSAEVVNLVT+ELGGKITRQPG IPGLNTKITSF+DPDGWKTVLVDNEDFLKE+  E
Sbjct: 232 DVYKSAEVVNLVTKELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNEDFLKELHKE 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493080|gb|AFK34606.1| unknown [Medicago truncatula]

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 100/118 (84%), Positives = 110/118 (93%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E ALG+KL RTVD+P+YKYTLAMLGYAEE +T VLELTYNYGVTEYTKGNAYAQVA+ TD
Sbjct: 157 EKALGLKLARTVDRPQYKYTLAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAVGTD 216

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 218
           DVYKSAE+VNL TQE GGKITRQPG IPGLNTKITSF+DPDGWKTVLVDN+DFLKE++
Sbjct: 217 DVYKSAELVNLATQEFGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 274

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555674|ref|XP_003546155.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 98/118 (83%), Positives = 112/118 (94%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E ALG+++++  D+PEYKYT+AMLGYAEE +TTVLELTYNYGVTEYTKGNAYAQVAI TD
Sbjct: 170 EKALGLRVVKKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTD 229

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 218
           DVYKSAEVVN+VTQELGGKITRQPG IPGLNTKIT+F+DPDGWKTVLVDN+DFLKE++
Sbjct: 230 DVYKSAEVVNIVTQELGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531939|ref|XP_003534533.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 97/118 (82%), Positives = 111/118 (94%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E  LG+++++  D+PEYKYT+AMLGYAEE +TTVLELTYNYGVTEYTKGNAYAQVAI TD
Sbjct: 179 EKTLGLRVVKKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTD 238

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 218
           DVYKSAEVVN+VTQELGGKITRQPG +PGLNTKITSF+DPDGWKTVLVDN+DFLKE++
Sbjct: 239 DVYKSAEVVNIVTQELGGKITRQPGPVPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906514|gb|ACJ11750.1| lactoylglutathione lyase [Gossypium hirsutum]

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 97/118 (82%), Positives = 110/118 (93%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E ALGMKL++ VD+PEYKY++AM+GYAEE +TTVLELTYNYGVTEYTKGNAYAQVAISTD
Sbjct: 172 EKALGMKLVKKVDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTD 231

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 218
           DVYKS EVV  V QELGGK+TR+PG IPG+NTKITSF+DPDGWKTVLVDNEDFLKE++
Sbjct: 232 DVYKSGEVVEHVIQELGGKVTRKPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELK 289

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520071|ref|XP_003528689.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 96/118 (81%), Positives = 108/118 (91%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E ALGMK++R VDKPEYKYT+AMLGY EE +TTVLELTYNYGVTEY+KGNAYAQ+AI TD
Sbjct: 186 EKALGMKVVRKVDKPEYKYTIAMLGYGEEHETTVLELTYNYGVTEYSKGNAYAQIAIGTD 245

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 218
           DVYKSAEVVN V +E+GGKITRQPG IPGLNTK TSF+DPDGWKTVLVDN DFL+E++
Sbjct: 246 DVYKSAEVVNQVIKEVGGKITRQPGPIPGLNTKTTSFLDPDGWKTVLVDNVDFLEELK 303

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.518	0.325	0.686	2.5e-81
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.472	0.753	0.472	1.8e-23
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.472	0.753	0.472	1.8e-23
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.472	0.770	0.472	4.3e-22
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.477	0.772	0.450	1.9e-21
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.440	0.713	0.480	4.9e-21
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.377	0.278	0.382	6.9e-19
FB|FBgn0031143	293	CG1532 [Drosophila melanogaste	0.372	0.279	0.397	1.9e-18
ZFIN|ZDB-GENE-040912-38	298	glod4 "glyoxalase domain conta	0.327	0.241	0.445	5.3e-18
UNIPROTKB|F1RHJ9	496	GLOD4 "Uncharacterized protein	0.372	0.165	0.397	6.8e-18

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 433 (157.5 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
 Identities = 81/118 (68%), Positives = 97/118 (82%)

Query:   101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
             E A GM+LLRT D PEYKYT+AM+GY  ED+  VLELTYNYGVTEY KGNAYAQ+AI TD
Sbjct:   237 EKAFGMELLRTRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTD 296

Query:   161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 218
             DVYK+AE + L     GGKITR+PG +PG++TKIT+ +DPDGWK+V VDN DFLKE++
Sbjct:   297 DVYKTAEAIKL----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 51/108 (47%), Positives = 68/108 (62%)

Query:   104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY 163
             +GM LLR  +  EYKYTLA LGY +E Q  V+ELTYN+GV +Y KGNAY  +AI  DD+Y
Sbjct:    27 MGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDDIY 86

Query:   164 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 211
              + + +       GG +TR+PG + G  T I    DPDG+   L+ N+
Sbjct:    87 ATCDTIKAA----GGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQNK 130

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 51/108 (47%), Positives = 68/108 (62%)

Query:   104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY 163
             +GM LLR  +  EYKYTLA LGY +E Q  V+ELTYN+GV +Y KGNAY  +AI  DD+Y
Sbjct:    27 MGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDDIY 86

Query:   164 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 211
              + + +       GG +TR+PG + G  T I    DPDG+   L+ N+
Sbjct:    87 ATCDTIKAA----GGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQNK 130

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 52/110 (47%), Positives = 73/110 (66%)

Query:   104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY 163
             LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+  
Sbjct:    24 LGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN-- 81

Query:   164 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDGWKTVLVDNED 212
              +AE    + Q  GG +TR+ G + G  T + +FV DPDG+K  L++ +D
Sbjct:    82 -AAEACEKIRQN-GGNVTREAGPVKG-GTTVIAFVEDPDGYKIELIEEKD 128

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 50/111 (45%), Positives = 72/111 (64%)

Query:   102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 161
             D LGMKLLR  +  EYKYTLA +GY  ED+  V+ELTYN+GV +Y  G A+  +AI  DD
Sbjct:    23 DVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNWGVEKYELGTAFGHIAIGVDD 82

Query:   162 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDGWKTVLVDNE 211
             VY++ E +    ++ GGK+ R+   + G  T + +FV DPD +K  L+ ++
Sbjct:    83 VYETVERI----RKSGGKVAREAAPVLG-GTTVIAFVEDPDNYKIELIQDD 128

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 49/102 (48%), Positives = 63/102 (61%)

Query:   104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQ-TTVLELTYNYGVTEYTKGNAYAQVAISTDDV 162
             LGMKLLRT + PEYKY+LA +GY EE     V+ELTYN+G  +Y  G  +  +AI  DD+
Sbjct:    25 LGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYNWGTEKYDLGTGFGHIAIGDDDI 84

Query:   163 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWK 204
             Y   E +       GGK+TR PG + G  T+I    DPDG+K
Sbjct:    85 YARCEAIAAA----GGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 172 (65.6 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
 Identities = 36/94 (38%), Positives = 53/94 (56%)

Query:    22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPE 70
             RR LH V++VG+  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE
Sbjct:     4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:    71 QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDAL 104
               HFV ELTYNYG+  Y +G  F    +A+  A+
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDFMGLTLASSQAV 97

GO:0005739 "mitochondrion" evidence=IEA;ISO

FB|FBgn0031143 CG1532 [Drosophila melanogaster (taxid:7227)]

 Score = 182 (69.1 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
 Identities = 37/93 (39%), Positives = 55/93 (59%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQ 71
             R LH V+++GD  +   F+ +  GM +LR  +  E            ++S   +G+GPE 
Sbjct:    12 RALHYVFKIGDRAKNAFFFRQILGMTVLRHEEFKEGCDAACNGPYDNRWSKTMVGYGPES 71

Query:    72 SHFVVELTYNYGVTSYDIGTGFGHFAIATEDAL 104
             SHFV+ELTYNYGV+SY++G  FG   I ++D L
Sbjct:    72 SHFVIELTYNYGVSSYEMGNDFGGVTIHSKDIL 104

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-040912-38 glod4 "glyoxalase domain containing 4" [Danio rerio (taxid:7955)]

 Score = 175 (66.7 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
 Identities = 37/83 (44%), Positives = 47/83 (56%)

Query:    22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPE 70
             +R LH V++VGD  +T  FY +  GMK+LR  +  E            K+S   +GFGPE
Sbjct:     4 KRALHFVFKVGDRTKTATFYRDVLGMKILRHEEFEEGCKATCNGPYDGKWSKTMVGFGPE 63

Query:    71 QSHFVVELTYNYGVTSYDIGTGF 93
               HFV ELTYNYGV  Y +G  F
Sbjct:    64 DDHFVAELTYNYGVGEYRLGNDF 86

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1RHJ9 GLOD4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 172 (65.6 bits), Expect = 6.8e-18, Sum P(2) = 6.8e-18
 Identities = 37/93 (39%), Positives = 52/93 (55%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQ 71
             R LH V++VG+  +T  FY +  GMK+LR  +  E            K+S   +GFGPE 
Sbjct:   203 RALHFVFKVGNRFQTAYFYRDVLGMKILRHEEFDEGCKAACNGPYDGKWSKTMVGFGPED 262

Query:    72 SHFVVELTYNYGVTSYDIGTGFGHFAIATEDAL 104
              HFV ELTYNYG+ +Y +G  F    +A+  A+
Sbjct:   263 DHFVAELTYNYGIGNYKLGNDFMGITLASSQAV 295

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q948T6	LGUL_ORYSJ	4, ., 4, ., 1, ., 5	0.8135	0.5318	0.4020	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.4.1.5	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_IV1582	lactoylglutathione lyase (EC-4.4.1.5) (294 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_1250018	hydroxyacylglutathione hydrolase (EC-3.1.2.6) (259 aa)						•	•		0.911
	gw1.XI.471.1	tryptophan synthase, beta chain (EC-4.2.1.20) (398 aa)						•			0.800
	gw1.XI.1757.1	tryptophan synthase, beta chain (EC-4.2.1.20) (378 aa)						•			0.800
	gw1.123.110.1	hypothetical protein (461 aa)						•			0.800
	fgenesh4_pg.C_LG_XIII000422	tryptophan synthase, beta chain (EC-4.2.1.20) (410 aa)						•			0.800
	eugene3.00120775	hypothetical protein (752 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_XV0575	hypothetical protein (700 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_V1322	tryptophan synthase (EC-4.2.1.20) (310 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_II0422	SubName- Full=Putative uncharacterized protein; (310 aa)						•			0.800
	estExt_fgenesh4_pg.C_280257	threonine deaminase (EC-4.3.1.19) (543 aa)						•			0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	220
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	2e-68
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	6e-68
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	8e-50
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	3e-38
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	9e-34
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	4e-29
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	9e-28
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	1e-27
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	9e-26
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	3e-25
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	7e-24
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	9e-15
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	5e-12
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	8e-10
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	1e-08
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	7e-08
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	2e-07
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	8e-07
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	2e-05
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	5e-05
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	2e-04
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	7e-04
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	8e-04

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  211 bits (538), Expect = 2e-68
 Identities = 87/118 (73%), Positives = 100/118 (84%), Gaps = 4/118 (3%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E A GMKLLR  D PEYKYT+AM+GY  ED+TTVLELTYNYGVTEYTKGNAYAQ+AI TD
Sbjct: 173 EKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTD 232

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 218
           DVYK+AE + LV    GGKITR+PG +PG+NTKIT+ +DPDGWKTV VDN DFLKE++
Sbjct: 233 DVYKTAEAIKLV----GGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  210 bits (535), Expect = 6e-68
 Identities = 83/102 (81%), Positives = 88/102 (86%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
            A AS AA   +LLEWPKKDKRR LH VYRVGDLDRTIKFYTEC GMKLLRKRD+PEEKY
Sbjct: 2   SAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY 61

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED 102
           +NAFLG+GPE S+FVVELTYNYGV  YDIGTGFGHF IA ED
Sbjct: 62  TNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVED 103

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  159 bits (403), Expect = 8e-50
 Identities = 55/96 (57%), Positives = 69/96 (71%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF 67
           A + +L+  PK  KRR LH + RVGDLD+++ FYTE  GMKLLRKRD PE K+S AFLG+
Sbjct: 2   AESGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGY 61

Query: 68  GPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDA 103
           G E S  V+ELT+N+G   YD+G GFGH AI  +D 
Sbjct: 62  GDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDV 97

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  128 bits (324), Expect = 3e-38
 Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 1/80 (1%)

Query: 24  FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG 83
           FLH + RV DL++++ FYT+  GMKLLR++D PE K++  FLG+  E S  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 84  VT-SYDIGTGFGHFAIATED 102
               YD G GFGH A A +D
Sbjct: 61  TEEPYDNGNGFGHLAFAVDD 80

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  117 bits (296), Expect = 9e-34
 Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 4/111 (3%)

Query: 102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 161
           + LGMKLLR  D PE K++LA LGY +E    V+ELT+N+G  +Y  GN +  +AI  DD
Sbjct: 37  EVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDD 96

Query: 162 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 212
           VYK+ E V    + LGG + R+PG + G  T I    DPDG+K  L+  + 
Sbjct: 97  VYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKS 143

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  109 bits (275), Expect = 4e-29
 Identities = 46/80 (57%), Positives = 55/80 (68%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
                + RVGDLDR+IKFY + FGMKLLRKRD PE KY+ A +G+GPE    V+ELTYNY
Sbjct: 154 PLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNY 213

Query: 83  GVTSYDIGTGFGHFAIATED 102
           GVT Y  G  +   AI T+D
Sbjct: 214 GVTEYTKGNAYAQIAIGTDD 233

Length = 286

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  106 bits (265), Expect = 9e-28
 Identities = 51/105 (48%), Positives = 65/105 (61%), Gaps = 4/105 (3%)

Query: 104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY 163
           LGMKLLR  D PE KYT A LGY  ED   V+ELTYNYGV +Y  G  +    I+ +DV 
Sbjct: 46  LGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA 105

Query: 164 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV 208
           K+ E+V    +  GGK+TR+PG + G  + I    DPDG+K  L+
Sbjct: 106 KTVELV----KAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELI 146

Length = 286

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  101 bits (252), Expect = 1e-27
 Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 4/111 (3%)

Query: 102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 161
           + LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+
Sbjct: 16  NVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN 75

Query: 162 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 212
             ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct: 76  AAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 122

Length = 129

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 96.6 bits (240), Expect = 9e-26
 Identities = 42/74 (56%), Positives = 55/74 (74%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
           RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 90  GTGFGHFAIATEDA 103
           GT +GH A++ ++A
Sbjct: 63  GTAYGHIALSVDNA 76

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 94.9 bits (237), Expect = 3e-25
 Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 9/104 (8%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAIST 159
            D LGMKLLR  D PE K+TL  LGY +ED   VLELTYN+G  E Y  GN +  +A + 
Sbjct: 19  TDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAV 78

Query: 160 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDG 202
           DDVY + E +    +E+G ++T+ PG       K  +F+ DPDG
Sbjct: 79  DDVYAACERL----EEMGVEVTKPPGD---GGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 91.6 bits (228), Expect = 7e-24
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 11/94 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPE 70
           RR LH V++VG+ ++TIKFY E  GMK+LR  +  E            K+S   +G+GPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 71  QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDAL 104
             HFVVELTYNYG+  Y++G  F    I ++ A+
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQAV 94

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 67.4 bits (165), Expect = 9e-15
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H   RVGDL++++ FYT+  G KL+ + D  E    +AF          V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNE 56

Query: 83  GVTSYDIGT---GFGHFAIATED 102
                  G         A + +D
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDD 79

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 60.4 bits (147), Expect = 5e-12
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 27/120 (22%)

Query: 102 DALGMKLLR----------TVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN 150
           + LGMK+LR            + P + K++  M+GY  ED   V+ELTYNYG+ +Y  GN
Sbjct: 22  EVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN 81

Query: 151 AYAQVAISTDDVYKSAEVVN-LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD 209
            +  + I +     +A+  N  VT+   G    +                P G+K  L+D
Sbjct: 82  DFLGITIHSKQAVSNAKKHNWPVTEVEDGVYEVK---------------APGGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 55.6 bits (134), Expect = 8e-10
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 43/133 (32%)

Query: 102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTV-----------------LELTYNYGVT 144
             LGM LL+ +D PE K++L  LGY  ED  T                  +ELT+N+G T
Sbjct: 47  RVLGMSLLKRLDFPEMKFSLYFLGY--EDSETAPTDPPERTVWTFGRKATIELTHNWG-T 103

Query: 145 E-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLN 191
           E       Y  GN+    +  + I+ DDVYK+ E      ++LG +  ++P  G + GL 
Sbjct: 104 ESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKLGVEFVKKPDDGKMKGL- 158

Query: 192 TKITSFV-DPDGW 203
               +F+ DPDG+
Sbjct: 159 ----AFIKDPDGY 167

Length = 185

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 50.9 bits (122), Expect = 1e-08
 Identities = 33/126 (26%), Positives = 45/126 (35%), Gaps = 22/126 (17%)

Query: 92  GFGHFAIAT----------EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY 141
              H A+             D LG KL+  VD  E     A           VLEL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNE 56

Query: 142 GVTEY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV 198
                     G+  A +A S DDV  + + +    +  G +I R+PG       + + F 
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDDVDAAYDRL----KAAGVEIVREPGRHGW-GGRYSYFR 111

Query: 199 DPDGWK 204
           DPDG  
Sbjct: 112 DPDGNL 117

Length = 120

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 50.8 bits (121), Expect = 7e-08
 Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 39/129 (30%)

Query: 104 LGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNYGVTE--- 145
           LGM LL+ +D PE K++L  +GY +                 Q   +ELT+N+G TE   
Sbjct: 97  LGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWG-TESDP 155

Query: 146 ----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKIT 195
               Y  GN+    +  + I+ DDVYK+ E      +ELG +  ++P  G + G+     
Sbjct: 156 DFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGVEFVKKPNDGKMKGI----- 206

Query: 196 SFV-DPDGW 203
           +F+ DPDG+
Sbjct: 207 AFIKDPDGY 215

Length = 233

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL+  + FY +  G ++L +     E    AFL  G       +EL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLG----GTRLEL-FEGDEP 52

Query: 86  SYDIGTGFGHFAIATED 102
           +   G G  H A   +D
Sbjct: 53  APPSGGGGVHLAFEVDD 69

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 47.7 bits (113), Expect = 8e-07
 Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 25/100 (25%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS--------------- 72
           +YR+ D   ++ FY+   GM LL++ D PE K+S  F+G+    S               
Sbjct: 80  MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQ 139

Query: 73  HFVVELTYNYGVTS------YDIGT----GFGHFAIATED 102
              +ELT+N+G  S      Y  G     GFGH  I  +D
Sbjct: 140 KATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD 179

Length = 233

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
          R      RV DL+R++ FY +  G+++L + D      S A LG G ++   V+E   + 
Sbjct: 2  RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA 55

Query: 83 GVTSYDIGTGFGHFAI 98
                  TG  HFAI
Sbjct: 56 PPAPPG-TTGLYHFAI 70

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 41.3 bits (96), Expect = 5e-05
 Identities = 16/85 (18%), Positives = 26/85 (30%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H    V DL+ +I FYT+  G++L++      +      L F          L + 
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 82  YGVTSYDIGTGFGHFAIATEDALGM 106
                   G             LG+
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGL 85

Length = 138

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD 54
          +R  H V  V D++ T+ FYT   GM+++R  +
Sbjct: 2  KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 38.1 bits (89), Expect = 7e-04
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H    V DL+   KFY +  G ++    ++PE+     F+  G  +   +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 83  GVTSY--DIGTGFGHFAIATED 102
            +  +    G G  H AI  +D
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDD 82

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.7 bits (88), Expect = 8e-04
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 17/84 (20%)

Query: 27  AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS 86
           A+Y V DL+    FY +  G++L+ K D        AF   G       + L ++ G TS
Sbjct: 5   ALY-VDDLEAAEAFYEDVLGLELMLKED-----RRLAFFWVGGRG----MLLLFDPGATS 54

Query: 87  YDIGT-------GFGHFAIATEDA 103
              G        G GHFA A    
Sbjct: 55  TPGGEIPPHGGSGPGHFAFAIPAE 78

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	220
PLN02300	286	lactoylglutathione lyase	99.96
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.96
PLN02367	233	lactoylglutathione lyase	99.91
PLN03042	185	Lactoylglutathione lyase; Provisional	99.89
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.89
PRK10291	129	glyoxalase I; Provisional	99.87
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.86
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.84
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.81
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.8
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.8
PRK11478	129	putative lyase; Provisional	99.79
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.79
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.79
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.79
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.78
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.78
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.76
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.76
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.75
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.75
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.75
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.74
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.74
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.73
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.73
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.72
PRK06724	128	hypothetical protein; Provisional	99.72
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.72
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.71
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.71
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.71
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.7
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.7
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.7
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.7
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.7
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.7
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.7
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.69
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.69
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.69
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.69
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.69
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.69
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.68
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.68
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.67
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.67
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.66
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.66
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.66
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.66
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.65
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.64
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.64
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.64
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.63
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.63
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.62
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.62
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.6
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.6
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.6
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.6
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.59
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.59
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.59
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.59
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.58
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.57
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.57
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.57
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.56
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.5
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.5
PLN02300	286	lactoylglutathione lyase	99.5
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.47
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.46
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.41
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.4
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.26
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.25
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.23
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.1
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.03
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.97
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.94
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.91
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.75
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.74
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.74
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.35
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.21
PRK10148	147	hypothetical protein; Provisional	98.12
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.1
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.02
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.97
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	97.77
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.19
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	96.88
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.66
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	96.56
PF15067	236	FAM124: FAM124 family	96.36
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	95.08
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	94.88
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	94.71
PLN02367	233	lactoylglutathione lyase	94.48
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	94.23
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	93.31
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	92.87
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	92.36
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	91.72
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	91.45
PLN03042	185	Lactoylglutathione lyase; Provisional	90.96
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	90.15
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	89.37
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	89.3
PRK11478	129	putative lyase; Provisional	89.03
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	89.03
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	88.33
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	88.08
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	86.8
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	85.22
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	84.8
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	84.55
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	83.37
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	82.48
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	81.1
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	80.72
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	80.3

>PLN02300 lactoylglutathione lyase

Probab=99.96  E-value=1.1e-27  Score=207.01  Aligned_cols=213  Identities=78%  Similarity=1.301  Sum_probs=160.0

Q ss_pred             CccCccccccceeeccccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEee
Q 027676            2 AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN   81 (220)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~   81 (220)
                      |.+|+++--..+++||++.+.+++|++|.|+|+++|++||+++|||++..+...++..+..+|++.++...+..++|...
T Consensus         3 ~~~~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~   82 (286)
T PLN02300          3 AAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYN   82 (286)
T ss_pred             cccccChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEecc
Confidence            44667777778999999999999999999999999999999999999987765566667778887765556678888765


Q ss_pred             cCCcccCCCCceeEEEEEeCcc----------------------------------------------------------
Q 027676           82 YGVTSYDIGTGFGHFAIATEDA----------------------------------------------------------  103 (220)
Q Consensus        82 ~~~~~~~~g~~~~~~~~~~~~~----------------------------------------------------------  103 (220)
                      .+......+.+..|++|.++++                                                          
T Consensus        83 ~~~~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~  162 (286)
T PLN02300         83 YGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRV  162 (286)
T ss_pred             CCCCccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEe
Confidence            5544444566788999999881                                                          


Q ss_pred             -------------ccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHH
Q 027676          104 -------------LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  170 (220)
Q Consensus       104 -------------~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~  170 (220)
                                   +|+++......++..+..+++++++......+++..+.+..+++.++++.|++|.|+|++++++++ 
T Consensus       163 ~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~-  241 (286)
T PLN02300        163 GDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI-  241 (286)
T ss_pred             CCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHH-
Confidence                         233322211122222333334332222334566666555444566789999999999999999999 


Q ss_pred             HHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhhhhhhh
Q 027676          171 LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ  218 (220)
Q Consensus       171 ~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~~~~~~  218 (220)
                         +++|+++..+|...|+.+.+.++|+||||+.|+|++..+|.+|+.
T Consensus       242 ---~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~~  286 (286)
T PLN02300        242 ---KLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE  286 (286)
T ss_pred             ---HHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhcC
Confidence               799999999998888755578999999999999999999999973

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.96  E-value=6.8e-29  Score=203.36  Aligned_cols=197  Identities=48%  Similarity=0.829  Sum_probs=162.8

Q ss_pred             ceeeccccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCC-----------CceeEEEeeecCCCceeEEEEEe
Q 027676           12 ELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVVELTY   80 (220)
Q Consensus        12 ~~~~~~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~lel~~   80 (220)
                      .++.|++....+..|+.+.|.|..+++.||+++|||++.+.+++++           ++|+..++++|+|++|+++||++
T Consensus         6 d~~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTY   85 (299)
T KOG2943|consen    6 DLLCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTY   85 (299)
T ss_pred             hhhhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEe
Confidence            7889999999999999999999999999999999999999999998           89999999999999999999999


Q ss_pred             ecCCcccCCCCceeEEEEEeCcc---------------------------------------------------------
Q 027676           81 NYGVTSYDIGTGFGHFAIATEDA---------------------------------------------------------  103 (220)
Q Consensus        81 ~~~~~~~~~g~~~~~~~~~~~~~---------------------------------------------------------  103 (220)
                      +||+.+|..|++++||++..+++                                                         
T Consensus        86 NYgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~~~g~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~VgdL~ks~k  165 (299)
T KOG2943|consen   86 NYGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGKGSGCGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLNVGDLQKSIK  165 (299)
T ss_pred             ccCccceeccCCcccEEEeHHHHHHHHHHhcCcCCcccceEEEEEECCCCcEEEEeccCCCCCCeEEEEEEehhHHHHHH
Confidence            99999999999999999998882                                                         


Q ss_pred             -----ccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676          104 -----LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus       104 -----~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                           +||+++..    +.+.++++|+|+++  .+.||++++++......+.|...+++-.+++..+.+.+    +..+.
T Consensus       166 yw~~~lgM~ilek----eek~t~~~mgYgd~--q~~LElt~~~~~id~~kg~griafaip~d~~~~l~e~i----K~~n~  235 (299)
T KOG2943|consen  166 YWEKLLGMKILEK----EEKYTRARMGYGDE--QCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEAI----KSANG  235 (299)
T ss_pred             HHHHHhCcchhhh----hhhhhhhhhccCCc--ceEEEEEeccCcccccccceeEEEeccccccccHHHHH----HHhcc
Confidence                 23333322    33456788999876  59999999998766665555544444455666666666    78887


Q ss_pred             eeecCCccc--CCCC-ceEEEEECCCCCEEEEEechhhhhhhh
Q 027676          179 KITRQPGSI--PGLN-TKITSFVDPDGWKTVLVDNEDFLKEIQ  218 (220)
Q Consensus       179 ~i~~~p~~~--~~~~-~~~~~~~DPdG~~iElv~~~~~~~~~~  218 (220)
                      +|..+....  |++. .+++.+.|||||.|.|+.+++|+++.+
T Consensus       236 ~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~lsk  278 (299)
T KOG2943|consen  236 TILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKLSK  278 (299)
T ss_pred             ccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHHhc
Confidence            777776543  4543 377888999999999999999999876

>PLN02367 lactoylglutathione lyase

Probab=99.91  E-value=4.4e-23  Score=171.93  Aligned_cols=146  Identities=30%  Similarity=0.553  Sum_probs=107.8

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +....++|++|+|+|+++|++||+++|||++..+.++++++|+.+|+++++....           +. . ...      
T Consensus        71 t~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~-----------p~-d-~~~------  131 (233)
T PLN02367         71 TKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASA-----------PT-D-PTE------  131 (233)
T ss_pred             CCCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCcccc-----------cc-c-ccc------
Confidence            3457999999999999999999999999999999999999999999976421100           00 0 000      


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCc------ccccC----CceeeEEEEeCCHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT------EYTKG----NAYAQVAISTDDVYKSAEV  168 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~------~~~~~----~g~~Hiaf~v~Dv~a~~~~  168 (220)
                                         +..   +.++   ....|||+++.+.+      .++.+    .|++||||.|+|+++++++
T Consensus       132 -------------------r~~---~~~~---~~~~LELt~n~g~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~er  186 (233)
T PLN02367        132 -------------------RTV---WTFG---QKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACER  186 (233)
T ss_pred             -------------------cee---eccC---CCCEEEEecCCCCCccccchhcccCCCCCCCceEEEEEcCCHHHHHHH
Confidence                               000   0000   13467777766543      14444    3899999999999999999


Q ss_pred             HHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhhh
Q 027676          169 VNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  214 (220)
Q Consensus       169 l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~~  214 (220)
                      |    +++|+++..+|...++  .+++||+||||++|||++.....
T Consensus       187 L----~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~~~  226 (233)
T PLN02367        187 F----EELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKTIG  226 (233)
T ss_pred             H----HHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccccc
Confidence            9    7999999988765322  47899999999999999987654

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.89  E-value=9.3e-22  Score=159.96  Aligned_cols=145  Identities=26%  Similarity=0.509  Sum_probs=101.3

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +.+.+++|++|+|+|+++|++||+++|||++..+...+++.++.+|+++++...           .+....+    .   
T Consensus        23 ~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~-----------~~~~~~~----~---   84 (185)
T PLN03042         23 TKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSET-----------APTDPPE----R---   84 (185)
T ss_pred             CCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCccc-----------CCcchhh----c---
Confidence            567899999999999999999999999999999887777788999987532100           0000000    0   


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcc------cc----cCCceeeEEEEeCCHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YT----KGNAYAQVAISTDDVYKSAEV  168 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~------~~----~~~g~~Hiaf~v~Dv~a~~~~  168 (220)
                                            .++|-    .....|||+++.+..+      +.    .+.|+.||||.|+|+++++++
T Consensus        85 ----------------------~~~l~----~~~~~lEL~~~~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~  138 (185)
T PLN03042         85 ----------------------TVWTF----GRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACER  138 (185)
T ss_pred             ----------------------ccccc----cCCCEEEEEEcCCCcccccccccccCCCCCCCccEEEEEcCCHHHHHHH
Confidence                                  00000    0122445544332211      11    124899999999999999999


Q ss_pred             HHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          169 VNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       169 l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      |    +++|+++...|..  +...+++||+||||+.|||++....
T Consensus       139 L----~~~Gv~v~~~p~~--~~~~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042        139 F----EKLGVEFVKKPDD--GKMKGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             H----HHCCCeEEeCCcc--CCceeEEEEECCCCCEEEEEECCCc
Confidence            9    7999999877654  2224678999999999999998665

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.89  E-value=1.8e-21  Score=152.59  Aligned_cols=143  Identities=50%  Similarity=0.860  Sum_probs=106.3

Q ss_pred             ccceeeccccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCC
Q 027676           10 NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI   89 (220)
Q Consensus        10 ~~~~~~~~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~   89 (220)
                      ++++.+-|+.-+++++|++|.|+|+++|++||+++|||++..+...+++.+..++++.++...+..+++...+       
T Consensus         4 ~~~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------   76 (150)
T TIGR00068         4 SGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNW-------   76 (150)
T ss_pred             ccccccCcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecC-------
Confidence            5678888999999999999999999999999999999998776555554445566654322222233332111       


Q ss_pred             CCceeEEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHH
Q 027676           90 GTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV  169 (220)
Q Consensus        90 g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l  169 (220)
                                                                          ...+...+.++.|+||.|+|+++++++|
T Consensus        77 ----------------------------------------------------~~~~~~~~~g~~hi~f~v~dld~~~~~l  104 (150)
T TIGR00068        77 ----------------------------------------------------GTEKYDLGNGFGHIAIGVDDVYKACERV  104 (150)
T ss_pred             ----------------------------------------------------CCCcccCCCceeEEEEecCCHHHHHHHH
Confidence                                                                0011223457889999999999999999


Q ss_pred             HHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhhhh
Q 027676          170 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  215 (220)
Q Consensus       170 ~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~~~  215 (220)
                          .++|+++..+|.+.+++..+.+||+||||++|||++.....+
T Consensus       105 ----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  146 (150)
T TIGR00068       105 ----RALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKD  146 (150)
T ss_pred             ----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhh
Confidence                799999988886655554578899999999999999875544

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PRK10291 glyoxalase I; Provisional

Probab=99.87  E-value=6.5e-21  Score=145.33  Aligned_cols=122  Identities=48%  Similarity=0.867  Sum_probs=90.3

Q ss_pred             EEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCccccce
Q 027676           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMK  107 (220)
Q Consensus        28 ~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~~g~~  107 (220)
                      +|.|+|+++|++||+++|||+++.+...++..+..+|++.++......+++..+++.                       
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------------------   57 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV-----------------------   57 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCC-----------------------
Confidence            488999999999999999999987766565556677776543222333444322111                       


Q ss_pred             EEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCccc
Q 027676          108 LLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI  187 (220)
Q Consensus       108 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~  187 (220)
                                                          .+...+.++.|+||.|+|+++++++|    +++|+++..++.+.
T Consensus        58 ------------------------------------~~~~~g~~~~hlaf~V~d~~~~~~~l----~~~G~~~~~~~~~~   97 (129)
T PRK10291         58 ------------------------------------DKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPV   97 (129)
T ss_pred             ------------------------------------CCCcCCCCeeEEEEEeCCHHHHHHHH----HHcCCccccCCccc
Confidence                                                11223457889999999999999999    79999998877665


Q ss_pred             CCCCceEEEEECCCCCEEEEEechh
Q 027676          188 PGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       188 ~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +.+..+++||+|||||.|||++..+
T Consensus        98 ~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         98 KGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CCCceEEEEEECCCCCEEEEEEccc
Confidence            5544467899999999999999764

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=3.2e-20  Score=142.31  Aligned_cols=126  Identities=34%  Similarity=0.570  Sum_probs=82.3

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .++.|++|+|+|+++|++||+++|||++..+.+++++.-......                                   
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~-----------------------------------   45 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGP-----------------------------------   45 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccC-----------------------------------
Confidence            378999999999999999999999999988776654200000000                                   


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                   ...+|++++++++++..+..+||+++.+..+++.+.+  |++|.|++. ++.++|    +++|+++.
T Consensus        46 -------------~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~~--~~hlav~~~-d~~~~l----~~~Gv~~~  105 (127)
T cd08358          46 -------------YDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGND--FLGITIHSK-QAVSNA----KKHNWPVT  105 (127)
T ss_pred             -------------CCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCCC--EEEEEEECH-HHHHHH----HHCCCcee
Confidence                         0011222333322222344566666655544554555  566666665 555777    79999987


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      ..|.       .++|++||||++|||+.
T Consensus       106 ~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358         106 EVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             cCCC-------CEEEEECCCCCEEEEec
Confidence            6544       27899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=1.3e-19  Score=140.00  Aligned_cols=58  Identities=12%  Similarity=0.229  Sum_probs=49.5

Q ss_pred             cCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          148 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       148 ~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .+.|+.||||.|+|+++++++|    +++|+++..++...+. +.+++||+||||+.|||+|.
T Consensus        84 ~~~g~~hia~~v~d~d~~~~~l----~~~G~~~~~~~~~~~~-~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          84 NALGLRRVMFAVDDIDARVARL----RKHGAELVGEVVQYEN-SYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCceEEEEEeCCHHHHHHHH----HHCCCceeCCceecCC-CeEEEEEECCCCCEEEeeec
Confidence            3458999999999999999999    7999999887654433 35889999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.81  E-value=2.1e-18  Score=128.72  Aligned_cols=121  Identities=43%  Similarity=0.803  Sum_probs=87.4

Q ss_pred             eeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCcc
Q 027676           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDA  103 (220)
Q Consensus        24 l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~  103 (220)
                      +.|++|.|+|+++|++||+++||+++..+...+++.+..+++..+....+..+++....+..                  
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~------------------   62 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE------------------   62 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCC------------------
Confidence            57999999999999999999999999876554444455666654210023334432211000                  


Q ss_pred             ccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       104 ~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                                                              .+...+++..|++|.|+|++++++++    +++|+++..+
T Consensus        63 ----------------------------------------~~~~~~~~~~~i~~~v~did~~~~~l----~~~G~~~~~~   98 (121)
T cd07233          63 ----------------------------------------EPYDNGNGFGHLAFAVDDVYAACERL----EEMGVEVTKP   98 (121)
T ss_pred             ----------------------------------------CCcCCCCCeEEEEEEeCCHHHHHHHH----HHCCCEEeeC
Confidence                                                    01223347889999999999999999    7999999988


Q ss_pred             CcccCCCCceEEEEECCCCCEEEEE
Q 027676          184 PGSIPGLNTKITSFVDPDGWKTVLV  208 (220)
Q Consensus       184 p~~~~~~~~~~~~~~DPdG~~iElv  208 (220)
                      |...  ...+++||+|||||.|||+
T Consensus        99 ~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          99 PGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             CccC--CCceEEEEECCCCCEEEeC
Confidence            8754  3347899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=1.9e-18  Score=129.42  Aligned_cols=122  Identities=21%  Similarity=0.317  Sum_probs=82.4

Q ss_pred             eeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCc
Q 027676           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (220)
Q Consensus        23 ~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~  102 (220)
                      +++|++|.|+|+++|++||+++|||+...+...+...+..+|+..+   .+..++|........                
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~----------------   61 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFD---DGARLELMTRPDIAP----------------   61 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecC---CCcEEEEEcCcccCC----------------
Confidence            5799999999999999999999999986554333334555566542   223455542110000                


Q ss_pred             cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcCCe
Q 027676          103 ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~~  179 (220)
                                                              ........|+.||||.|+|   +++++++|    +++|++
T Consensus        62 ----------------------------------------~~~~~~~~g~~hi~f~v~~~~~v~~~~~~l----~~~g~~   97 (125)
T cd07241          62 ----------------------------------------SPNEGERTGWAHLAFSVGSKEAVDELTERL----RADGYL   97 (125)
T ss_pred             ----------------------------------------CcccCCCCceEEEEEECCCHHHHHHHHHHH----HHCCCE
Confidence                                                    0001123478999999975   56666666    899999


Q ss_pred             eecCCcccCCCCceEEEEECCCCCEEEEE
Q 027676          180 ITRQPGSIPGLNTKITSFVDPDGWKTVLV  208 (220)
Q Consensus       180 i~~~p~~~~~~~~~~~~~~DPdG~~iElv  208 (220)
                      +..+|...+. +.+.++++|||||.|||.
T Consensus        98 ~~~~~~~~~~-g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          98 IIGEPRTTGD-GYYESVILDPEGNRIEIT  125 (125)
T ss_pred             EEeCceecCC-CeEEEEEECCCCCEEEeC
Confidence            9887754333 235678999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.80  E-value=3.2e-18  Score=136.24  Aligned_cols=60  Identities=20%  Similarity=0.177  Sum_probs=46.8

Q ss_pred             CCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCC-cc-cCCC-CceEEEEECCCCCEEEEEechh
Q 027676          149 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP-GS-IPGL-NTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       149 ~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p-~~-~~~~-~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +.|+.|+||.|+|++++++++    +++|+++..++ .. .++. ..+.+||+|||||.|||+++..
T Consensus        91 ~~g~~Hla~~v~dida~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        91 KTGVFHFCVQDPDVEGLAERI----VAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             cccceEEEEEcCCHHHHHHHH----HHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            468999999999999999999    78998764432 21 1221 2378999999999999999743

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PRK11478 putative lyase; Provisional

Probab=99.79  E-value=5.5e-18  Score=128.31  Aligned_cols=125  Identities=18%  Similarity=0.233  Sum_probs=81.4

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCC-CceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      .+.+++|++|.|+|+++|++||+++|||++..+...+. ..+... +..   .++..++|.......             
T Consensus         3 ~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~---~~~~~l~l~~~~~~~-------------   65 (129)
T PRK11478          3 GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGD-LAL---NGQYVIELFSFPFPP-------------   65 (129)
T ss_pred             CcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceee-Eec---CCCcEEEEEEecCCC-------------
Confidence            45789999999999999999999999999865321111 111111 111   112334443110000             


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                                                 .........|+.||||.|+|+++++++|    +++|+
T Consensus        66 -------------------------------------------~~~~~~~~~g~~hi~f~v~d~~~~~~~l----~~~G~   98 (129)
T PRK11478         66 -------------------------------------------ERPSRPEACGLRHLAFSVDDIDAAVAHL----ESHNV   98 (129)
T ss_pred             -------------------------------------------CCCCCCCCCceeEEEEEeCCHHHHHHHH----HHcCC
Confidence                                                       0000112347889999999999999999    78999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      ++...+.. +..+.+++||+|||||.|||++
T Consensus        99 ~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         99 KCEAIRVD-PYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             eeeccccC-CCCCCEEEEEECCCCCEEEEEe
Confidence            98644322 2223478999999999999987

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.79  E-value=1.2e-18  Score=137.34  Aligned_cols=122  Identities=21%  Similarity=0.236  Sum_probs=83.6

Q ss_pred             eeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCC-CCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        23 ~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      +++||+|.|+|+++|++||+++||+++..+...+ .+....+|+..+..  ...++.                       
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~-----------------------   55 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRG--EEYVDH-----------------------   55 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCC--CCcccc-----------------------
Confidence            5899999999999999999999999987654433 12234455543110  000000                       


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHH---HHHHHHHHHcCC
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA---EVVNLVTQELGG  178 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~---~~l~~~~~~~G~  178 (220)
                                                     +.+.+.       ...+.|++||||.|+|++++.   ++|    +++|+
T Consensus        56 -------------------------------~~~~l~-------~~~~~g~~Hiaf~v~die~~~~~~~~L----~~~Gv   93 (153)
T cd07257          56 -------------------------------HTLALA-------QGPESGVHHAAFEVHDFDAQGLGHDYL----REKGY   93 (153)
T ss_pred             -------------------------------hHHHHh-------cCCCCceeEEEEEcCCHHHHHHHHHHH----HHCCC
Confidence                                           000000       011358999999999998875   666    89999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++.++|+....+...++|++|||||.|||+...
T Consensus        94 ~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          94 EHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             cEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            998887765444446789999999999999764

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.79  E-value=2.7e-19  Score=138.59  Aligned_cols=141  Identities=29%  Similarity=0.461  Sum_probs=103.8

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      .-..+.|.+++|+|+.+|+.||++++|+.+..+..+++..|..+++++...+.           ++....+..  -    
T Consensus        19 ~t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~-----------vP~~~~~~~--v----   81 (170)
T KOG2944|consen   19 PTYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSED-----------VPKPEHGVS--V----   81 (170)
T ss_pred             chhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhccccccc-----------CccCCCCCc--e----
Confidence            33677999999999999999999999999998888888888888887631111           111111110  0    


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcc-----cccCC----ceeeEEEEeCCHHHHHHHHH
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----YTKGN----AYAQVAISTDDVYKSAEVVN  170 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-----~~~~~----g~~Hiaf~v~Dv~a~~~~l~  170 (220)
                                           .+.      -.+..+||+||.|...     +++++    |++||||.|+|+++++.+| 
T Consensus        82 ---------------------~~~------~~~~~~ELthn~Gtes~~~~~~~ngN~~prGfgHIci~V~di~sac~~l-  133 (170)
T KOG2944|consen   82 ---------------------FVF------SRNAKLELTHNWGTESPPDQAYLNGNKEPRGFGHICIEVDDINSACERL-  133 (170)
T ss_pred             ---------------------EEe------cccCceeeecCCCCCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHH-
Confidence                                 000      1245788888887541     33333    9999999999999999999 


Q ss_pred             HHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          171 LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       171 ~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                         +++|+++...|..  |....++|+.||||++||+..+
T Consensus       134 ---kekGV~f~Kk~~d--Gk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  134 ---KEKGVRFKKKLKD--GKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             ---HHhCceeeecCCC--ccccceeEEECCCCCeEEEeec
Confidence               7999998776653  3223789999999999999865

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.79  E-value=6.9e-18  Score=131.62  Aligned_cols=121  Identities=13%  Similarity=0.138  Sum_probs=80.4

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCce-eEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY-SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      ..+++|++|.|+|+++|++||+++|||++..+...+++.. ..+|+..+.  .++.+.                      
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~--~~h~~~----------------------   59 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSN--KPHDIA----------------------   59 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCC--CcceEE----------------------
Confidence            5789999999999999999999999999876643222211 123332210  011110                      


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCe
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~  179 (220)
                                                           +.       ...+.+++|+||.|+|++++ .+..++++++|++
T Consensus        60 -------------------------------------~~-------~~~~~~~~Hiaf~v~d~~~l-~~~~~~l~~~Gv~   94 (143)
T cd07243          60 -------------------------------------FV-------GGPDGKLHHFSFFLESWEDV-LKAGDIISMNDVS   94 (143)
T ss_pred             -------------------------------------Ee-------cCCCCCceEEEEEcCCHHHH-HHHHHHHHHcCCc
Confidence                                                 00       00124789999999998764 2233344899999


Q ss_pred             eecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          180 ITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       180 i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +...|.....+..+.+||+|||||.|||+..
T Consensus        95 i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          95 IDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             eEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            8877654332234779999999999999764

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.78  E-value=6.9e-18  Score=127.00  Aligned_cols=117  Identities=21%  Similarity=0.238  Sum_probs=78.8

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      .++++|+.|.|+|+++|++||+++|||++..+.  +++   .+|+.......++.+.+.                     
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~--~~~---~~~~~~~~~~~~~~~~l~---------------------   55 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRD--DQG---RVYLKAWDEFDHHSIVLR---------------------   55 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeec--CCc---eEEEEccCCCcccEEEec---------------------
Confidence            578999999999999999999999999987642  111   123322111111111110                     


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC---CHHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DVYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~---Dv~a~~~~l~~~~~~~G  177 (220)
                                                                   .....++.|+||.|+   |++++++++    +++|
T Consensus        56 ---------------------------------------------~~~~~~~~hiaf~v~~~~dv~~~~~~l----~~~G   86 (122)
T cd07265          56 ---------------------------------------------EADTAGLDFMGFKVLDDADLEKLEARL----QAYG   86 (122)
T ss_pred             ---------------------------------------------cCCCCCeeEEEEEeCCHHHHHHHHHHH----HHCC
Confidence                                                         011236789999998   566666666    8999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++...|.....+.++.+||+|||||.|||.+..+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~~  121 (122)
T cd07265          87 VAVERIPAGELPGVGRRVRFQLPSGHTMELYADKE  121 (122)
T ss_pred             CcEEEcccCCCCCCceEEEEECCCCCEEEEEEecc
Confidence            99887654322223478999999999999987643

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.78  E-value=9.4e-18  Score=129.33  Aligned_cols=126  Identities=18%  Similarity=0.223  Sum_probs=87.1

Q ss_pred             eeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCcc
Q 027676           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDA  103 (220)
Q Consensus        24 l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~  103 (220)
                      ++|++|.|.|+++|++||+++|||++..+...+  .....++..    ....+.|.......+.  .             
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~----g~~~l~l~~~~~~~~~--~-------------   59 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQ----GDINFVLNSPLNSFAP--V-------------   59 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEc----CCEEEEEecCCCCCCc--h-------------
Confidence            589999999999999999999999988764321  112233321    1223333211000000  0             


Q ss_pred             ccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       104 ~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                                                            .......+.+..|+||.|+|++++++++    +++|+++..+
T Consensus        60 --------------------------------------~~~~~~~~~g~~hia~~V~Dvda~~~~l----~~~G~~v~~~   97 (136)
T cd08342          60 --------------------------------------ADFLEKHGDGVCDVAFRVDDAAAAYERA----VARGAKPVQE   97 (136)
T ss_pred             --------------------------------------HHHHHhcCCceEEEEEEeCCHHHHHHHH----HHcCCeEccC
Confidence                                                  0000113457889999999999999999    7999999999


Q ss_pred             CcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          184 PGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       184 p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      |...++ +.+.+|++||||++|||+++..+
T Consensus        98 p~~~~~-~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          98 PVEEPG-ELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             ceecCC-eEEEEEEeccCCcEEEEEecCCC
Confidence            887444 45899999999999999998765

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.76  E-value=3.1e-17  Score=126.00  Aligned_cols=121  Identities=20%  Similarity=0.180  Sum_probs=83.6

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .+++|++|.|+|+++|++||+++||+++..+..  .   ...|+..+....++.+.|...                    
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~--------------------   56 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKT--------------------   56 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecC--------------------
Confidence            579999999999999999999999999876532  1   234444321112223323100                    


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                                                  .....|+.||||.|+|++++.+ +.++++++|+++.
T Consensus        57 --------------------------------------------~~~~~g~~hiaf~v~d~~~~~~-~~~~l~~~G~~~~   91 (134)
T cd08360          57 --------------------------------------------PAPMAGFHHAAFEVGDIDEVML-GGNHMLRAGYQTG   91 (134)
T ss_pred             --------------------------------------------CCCCCcceEEEEEeCCHHHHHH-HHHHHHHcCCccc
Confidence                                                        0012478999999999866653 3344489999988


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      .+|...+.+..+++||+||+|+.|||.....
T Consensus        92 ~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          92 WGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             cCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            7776555444477999999999999997543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=6.7e-17  Score=120.60  Aligned_cols=123  Identities=21%  Similarity=0.296  Sum_probs=81.3

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCC-CceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      .+++|++|.|.|++++++||+++|||++..+...++ ..+.. .+..   ..+..++|........              
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~l~~~~~~~~--------------   63 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLL---NGGYQLELFSFPNPPE--------------   63 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEec---CCCcEEEEEEcCCCCC--------------
Confidence            578999999999999999999999999876532221 11111 1111   1112333321100000              


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  180 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i  180 (220)
                                                                ......+.|+.|+||.|+|++++++++    +++|+++
T Consensus        64 ------------------------------------------~~~~~~~~g~~h~~~~v~d~~~~~~~l----~~~G~~~   97 (125)
T cd08352          64 ------------------------------------------RPSYPEACGLRHLAFSVEDIEAAVKHL----KAKGVEV   97 (125)
T ss_pred             ------------------------------------------CCCCCcCCCceEEEEEeCCHHHHHHHH----HHcCCcc
Confidence                                                      000112357899999999999999999    7899998


Q ss_pred             ecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          181 TRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       181 ~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      ..++..... +.+++|++||+||.|||+|
T Consensus        98 ~~~~~~~~~-~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          98 EPIRVDEFT-GKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             ccccccCCC-ceEEEEEECCCCCEEEecC
Confidence            776543222 3478999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.75  E-value=1.7e-17  Score=124.94  Aligned_cols=125  Identities=24%  Similarity=0.337  Sum_probs=83.0

Q ss_pred             eeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCc
Q 027676           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (220)
Q Consensus        23 ~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~  102 (220)
                      +++|++|.|+|+++|++||+++|||++......++..+..+++..+    ...++|....+..... +            
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~-~------------   63 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPI-A------------   63 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChH-H------------
Confidence            5799999999999999999999999987654333333445555432    1234443211100000 0            


Q ss_pred             cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeec
Q 027676          103 ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR  182 (220)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~  182 (220)
                                                              .-....+.|..|+||.|+|++++++++    +++|+++..
T Consensus        64 ----------------------------------------~~~~~~~~g~~~i~~~v~di~~~~~~l----~~~G~~~~~   99 (128)
T TIGR03081        64 ----------------------------------------KFLEKNGGGIHHIAIEVDDIEAALETL----KEKGVRLID   99 (128)
T ss_pred             ----------------------------------------HHHhcCCCceEEEEEEcCCHHHHHHHH----HHCCCcccC
Confidence                                                    000011347889999999999999999    789999987


Q ss_pred             C-CcccCCCCceEEEE--ECCCCCEEEEEe
Q 027676          183 Q-PGSIPGLNTKITSF--VDPDGWKTVLVD  209 (220)
Q Consensus       183 ~-p~~~~~~~~~~~~~--~DPdG~~iElv~  209 (220)
                      + |...++ +.+.+|+  +||||++||+++
T Consensus       100 ~~~~~~~~-g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081       100 EEPRIGAG-GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCCccCCC-CCEEEEecccccCcEEEEecC
Confidence            5 444333 3356677  799999999985

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.75  E-value=4.6e-17  Score=128.45  Aligned_cols=122  Identities=16%  Similarity=0.184  Sum_probs=82.9

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCC---CCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP---EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~   96 (220)
                      .-++++|++|.|+|+++|++||+++|||++..+...+   ++....+|+..+.  .+..+                    
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i--------------------   63 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG--RHHSL--------------------   63 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC--CCCCE--------------------
Confidence            3478999999999999999999999999987653221   0122233333210  11111                    


Q ss_pred             EEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHH---HHHHHHHHH
Q 027676           97 AIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK---SAEVVNLVT  173 (220)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a---~~~~l~~~~  173 (220)
                                                             .+..      ...+.++.||||.|+|+++   ++++|    
T Consensus        64 ---------------------------------------~~~~------~~~~~g~~Hiaf~V~d~~~l~~~~~~L----   94 (154)
T cd07237          64 ---------------------------------------ALAE------GPGPKRIHHLMLEVTSLDDVGRAYDRV----   94 (154)
T ss_pred             ---------------------------------------EEEc------CCCCceeEEEEEEcCCHHHHHHHHHHH----
Confidence                                                   1100      0123478999999998653   55555    


Q ss_pred             HHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          174 QELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       174 ~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++|+++..++...+....+.+|++||+|+.|||+....
T Consensus        95 ~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          95 RARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             HHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            899999988776655445588999999999999987643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.75  E-value=4.8e-17  Score=126.78  Aligned_cols=120  Identities=17%  Similarity=0.210  Sum_probs=83.4

Q ss_pred             eeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCccc
Q 027676           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDAL  104 (220)
Q Consensus        25 ~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~~  104 (220)
                      +|+.|.|+|+++|++||+++|||++..+...     ...|+.......++.+.+.                         
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~-------------------------   50 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVG-------------------------   50 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeec-------------------------
Confidence            5999999999999999999999998766321     2445543211111111110                         


Q ss_pred             cceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCC
Q 027676          105 GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  184 (220)
Q Consensus       105 g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p  184 (220)
                                                               .....+++||||.|+|++ .++++.++++++|+++..+|
T Consensus        51 -----------------------------------------~~~~~gl~Hiaf~v~~~~-~v~~~~~~l~~~G~~~~~~p   88 (141)
T cd07258          51 -----------------------------------------PASSSHFHHVNFMVTDID-DIGKALYRIKAHDVKVVFGP   88 (141)
T ss_pred             -----------------------------------------cCCCCceEEEEEECCCHH-HHHHHHHHHHHCCCcEEeCC
Confidence                                                     012348999999999864 33444445589999998888


Q ss_pred             cccCCCCceEEEEECCCCCEEEEEechhhhhh
Q 027676          185 GSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  216 (220)
Q Consensus       185 ~~~~~~~~~~~~~~DPdG~~iElv~~~~~~~~  216 (220)
                      ...+.+..+.+||+||+|+.|||........|
T Consensus        89 ~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~~  120 (141)
T cd07258          89 GRHPPSDSIFFYFLDPDGITVEYSFGMEEFAE  120 (141)
T ss_pred             ceECCCCCEEEEEECCCCCEEEEEeCcceecc
Confidence            76554455789999999999999987665544

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.74  E-value=1.1e-16  Score=120.43  Aligned_cols=117  Identities=19%  Similarity=0.249  Sum_probs=76.6

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +.+.+++|+.|.|+|+++|++||+++||+++..+..      ..+|+..+....++.+.+.                   
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~-------------------   56 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLT-------------------   56 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEe-------------------
Confidence            467899999999999999999999999999876521      1234432111111111111                   


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                                                     .....++.|+||.|+|. +.++.+.++++++|+
T Consensus        57 -----------------------------------------------~~~~~~~~h~af~v~~~-~~v~~~~~~l~~~G~   88 (121)
T cd09013          57 -----------------------------------------------ESPEAGLGHIAWRASSP-EALERRVAALEASGL   88 (121)
T ss_pred             -----------------------------------------------eCCCCceEEEEEEcCCH-HHHHHHHHHHHHcCC
Confidence                                                           01123788999999862 333333344489999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ++...+.. ++ .+..+||+|||||.||++..
T Consensus        89 ~~~~~~~~-~~-~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          89 GIGWIEGD-PG-HGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             ccccccCC-CC-CcceEEEECCCCCEEEEEEe
Confidence            87543322 22 23678999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.74  E-value=1.1e-16  Score=127.18  Aligned_cols=121  Identities=20%  Similarity=0.200  Sum_probs=74.8

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      ++++|++|.|+|+++|++||+++|||++......+.+.....|+..+  ..++.+                         
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~--~~~~~i-------------------------   54 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRK--GGVHDT-------------------------   54 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecC--CCcceE-------------------------
Confidence            68999999999999999999999999986543222221112222211  001101                         


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee-
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI-  180 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i-  180 (220)
                                                        .+.       ...+.++.|+||.|+|.++ ++.+.++++++|+++ 
T Consensus        55 ----------------------------------~l~-------~~~~~~~~Hiaf~v~~~~~-v~~~~~~L~~~G~~~~   92 (161)
T cd07256          55 ----------------------------------ALT-------GGNGPRLHHVAFWVPEPHN-IIRTCDLLAAAGYSDR   92 (161)
T ss_pred             ----------------------------------EEe-------cCCCCceeEEEEEcCCHHH-HHHHHHHHHHcCCCcc
Confidence                                              110       0123478899999997332 233333448999863 


Q ss_pred             -ecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          181 -TRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       181 -~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                       ..+|+.......+++||+|||||.||+++..
T Consensus        93 ~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          93 IERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             cccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence             3344432222346799999999999998644

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.73  E-value=2.2e-16  Score=126.12  Aligned_cols=123  Identities=20%  Similarity=0.227  Sum_probs=80.9

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +.+.+++|++|.|+|+++|++||+++|||++..+...+.+.....|+...  ..+..+.+..                  
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~------------------   61 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVS--NKVHDVAYTR------------------   61 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCC--CCceeEEEec------------------
Confidence            35689999999999999999999999999987654333222222333221  0111111100                  


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHH---HHHHHHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY---KSAEVVNLVTQE  175 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~---a~~~~l~~~~~~  175 (220)
                                                                 .  +....+++.||||.|+|++   +++++|    ++
T Consensus        62 -------------------------------------------~--~~~~~~~~~hiaf~v~~~~~l~~~~~~l----~~   92 (166)
T cd09014          62 -------------------------------------------D--PAGARGRLHHLAYALDTREDVLRAADIF----LE   92 (166)
T ss_pred             -------------------------------------------C--CCCCCCCceEEEEECCCHHHHHHHHHHH----HH
Confidence                                                       0  0011236889999999754   444555    89


Q ss_pred             cCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          176 LGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       176 ~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +|+++..+|.........++|++|||||.|||+..
T Consensus        93 ~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          93 NGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             cCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            99998777755332233569999999999999987

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2.4e-16  Score=117.54  Aligned_cols=122  Identities=24%  Similarity=0.311  Sum_probs=82.6

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.+++|+.|.|+|+++|++||+++|||+...+...+    ...++..+    ...+++....+..               
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~----~~~~~~~~----~~~~~l~~~~~~~---------------   57 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV----GRKALRFG----SQKINLHPVGGEF---------------   57 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC----CceEEEeC----CEEEEEecCCCcc---------------
Confidence            357999999999999999999999999987653211    11222221    1234442110000               


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC-HHHHHHHHHHHHHHcCCe
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD-VYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D-v~a~~~~l~~~~~~~G~~  179 (220)
                                                               .+.+...+.|..|+||.+++ ++++++++    +++|++
T Consensus        58 -----------------------------------------~~~~~~~~~~~~hi~~~~~~~~~~~~~~l----~~~G~~   92 (125)
T cd07253          58 -----------------------------------------EPAAGSPGPGSDDLCLITEPPIDELVAHL----EAHGVP   92 (125)
T ss_pred             -----------------------------------------CcCccCCCCCCceEEEEecccHHHHHHHH----HHCCce
Confidence                                                     00001234578999999985 88888888    799999


Q ss_pred             eecCCcccCC--CCceEEEEECCCCCEEEEEec
Q 027676          180 ITRQPGSIPG--LNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       180 i~~~p~~~~~--~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +..+|...++  +..+.+||+|||||.||++++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          93 IEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             eecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            9887765332  224789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.4e-16  Score=116.40  Aligned_cols=118  Identities=21%  Similarity=0.285  Sum_probs=81.2

Q ss_pred             eEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCc-eeEEEEEeecCCcccCCCCceeEEEEEeCccc
Q 027676           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS-HFVVELTYNYGVTSYDIGTGFGHFAIATEDAL  104 (220)
Q Consensus        26 Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~-~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~~  104 (220)
                      |++|.|.|++++++||+++|||++..+.... +.+..+++..  .+. +..+.+....+...                  
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~-~~~~~~~~~~--~~~~~~~l~~~~~~~~~~------------------   59 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMG-GGFRWVTVAP--PGSPETSLVLAPPANPAA------------------   59 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccC-CCcEEEEEeC--CCCCeeEEEEeCCCCccc------------------
Confidence            8999999999999999999999998764321 2223333322  111 33333321110000                  


Q ss_pred             cceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCC
Q 027676          105 GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  184 (220)
Q Consensus       105 g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p  184 (220)
                                                             .......+..|++|.|+|++++++++    +++|+++..++
T Consensus        60 ---------------------------------------~~~~~~~~~~~~~~~v~di~~~~~~l----~~~g~~~~~~~   96 (119)
T cd07263          60 ---------------------------------------MSGLQPGGTPGLVLATDDIDATYEEL----KARGVEFSEEP   96 (119)
T ss_pred             ---------------------------------------cccccCCCceEEEEEehHHHHHHHHH----HhCCCEEeecc
Confidence                                                   00122347789999999999999999    78999999888


Q ss_pred             cccCCCCceEEEEECCCCCEEEEEe
Q 027676          185 GSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       185 ~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      ...+.  .+.+|++||+||.|||++
T Consensus        97 ~~~~~--~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          97 REMPY--GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             ccCCC--ceEEEEECCCCCEEEEeC
Confidence            44333  488999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.72  E-value=1.8e-16  Score=121.60  Aligned_cols=57  Identities=19%  Similarity=0.202  Sum_probs=45.5

Q ss_pred             ceeeEEEEe---CCHHHHHHHHHHHHHHcCCeeecCCcccCC--CCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAIST---DDVYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v---~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      |..|+||.|   +|++++++++    +++|+++..+|...+.  .+.+.+||+|||||.||++...
T Consensus        63 g~~h~af~v~~~~dvd~~~~~l----~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         63 GPRHICYQAINRKVVDEVAEFL----SSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             CceeEEEecCChHHHHHHHHHH----HHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            678999998   5677777777    8999999888865442  3347899999999999998764

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.72  E-value=2.5e-16  Score=117.75  Aligned_cols=122  Identities=18%  Similarity=0.261  Sum_probs=77.1

Q ss_pred             eeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCC-ceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        23 ~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      +++|++|.|+|+++|++||+++|||+...+...+++ .....++.......+..++|........               
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---------------   65 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGP---------------   65 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCC---------------
Confidence            478999999999999999999999998876543221 1112222211111223344432111000               


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcCC
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELGG  178 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~  178 (220)
                                                                .......++.|+||.|+|   ++++++++    +++|+
T Consensus        66 ------------------------------------------~~~~~~~~~~hi~f~v~~~~~~~~~~~~~----~~~g~   99 (126)
T cd08346          66 ------------------------------------------KGRRGPGQIHHIAFSVPSEASLDAWRERL----RAAGV   99 (126)
T ss_pred             ------------------------------------------CCCCCCCcEEEEEEEcCCHHHHHHHHHHH----HHcCC
Confidence                                                      001122368899999996   46666666    89999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEE
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLV  208 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  208 (220)
                      ++..++..   ...+.+||+||+||.|||+
T Consensus       100 ~~~~~~~~---~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346         100 PVSGVVDH---FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cccceEee---cceEEEEEECCCCCEEEeC
Confidence            98764433   2348899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.71  E-value=4.5e-16  Score=118.92  Aligned_cols=115  Identities=26%  Similarity=0.329  Sum_probs=80.1

Q ss_pred             eeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCccc
Q 027676           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDAL  104 (220)
Q Consensus        25 ~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~~  104 (220)
                      +|++|.|+|+++|++||+++||+++......+ +....+|+..+  +.++.+.+..                        
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~--~~~~~l~~~~------------------------   53 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCD--EDHHDLALFP------------------------   53 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcC--CCcceEEEEc------------------------
Confidence            59999999999999999999999987664333 22334454432  1111122110                        


Q ss_pred             cceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHH---HHHHHHHHHHHHcCCeee
Q 027676          105 GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY---KSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       105 g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~---a~~~~l~~~~~~~G~~i~  181 (220)
                                                               .....++.|++|.|+|++   ++++++    +++|+++.
T Consensus        54 -----------------------------------------~~~~~~~~hl~~~v~d~~~~~~~~~~l----~~~G~~i~   88 (131)
T cd08343          54 -----------------------------------------GPERPGLHHVAFEVESLDDILRAADRL----AANGIQIE   88 (131)
T ss_pred             -----------------------------------------CCCCCCeeEEEEEcCCHHHHHHHHHHH----HHcCCeeE
Confidence                                                     001347889999999975   445555    89999998


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .+|...+.+..++++|+|||||.|||++..
T Consensus        89 ~~~~~~~~~~~~~~~~~DPdG~~iei~~~~  118 (131)
T cd08343          89 FGPGRHGPGNNLFLYFRDPDGNRVELSAEM  118 (131)
T ss_pred             ECCCccCCCCcEEEEEECCCCCEEEEEcCC
Confidence            877654443457899999999999999764

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.71  E-value=4.3e-16  Score=120.46  Aligned_cols=116  Identities=22%  Similarity=0.359  Sum_probs=80.8

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .+++|++|.|+|+++|++||+++||+++..+..      ..+++..+    +..+.+....+.                 
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~----g~~l~l~~~~~~-----------------   55 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN----GLWIALNEEKDI-----------------   55 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC----CeEEEeeccCCC-----------------
Confidence            579999999999999999999999999875421      23344321    122222110000                 


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHHHHHHHcCCe
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~~  179 (220)
                                                                .......++.|++|.++  |++++++++    +++|++
T Consensus        56 ------------------------------------------~~~~~~~~~~hiaf~v~~~dv~~~~~~l----~~~G~~   89 (139)
T PRK04101         56 ------------------------------------------PRNEIHQSYTHIAFSIEEEDFDHWYQRL----KENDVN   89 (139)
T ss_pred             ------------------------------------------CCccCCCCeeEEEEEecHHHHHHHHHHH----HHCCce
Confidence                                                      00111346789999998  788888888    799999


Q ss_pred             eecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          180 ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       180 i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +..+|...+. ..+.+||+|||||.|||.+..
T Consensus        90 i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         90 ILPGRERDER-DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             EcCCccccCC-CceEEEEECCCCCEEEEEeCC
Confidence            8776654433 348899999999999998753

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.71  E-value=1.1e-16  Score=119.52  Aligned_cols=53  Identities=21%  Similarity=0.139  Sum_probs=38.8

Q ss_pred             ceeeEEEEeCC---HHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEE
Q 027676          151 AYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  207 (220)
Q Consensus       151 g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iEl  207 (220)
                      +..|++|.+.+   +++++++|    ++.|+++..+|.....+....+|++||+||.|||
T Consensus        73 ~~~~i~~~~~~~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   73 GGHHIAFLAFDVDDLDAAYERL----KAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             TSEEEEEEESSHHHHHHHHHHH----HHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             cceeEEEEeccHHHHHHHHHHH----hhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            34566666665   44455555    8999999999876555555667899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.70  E-value=6.3e-16  Score=120.72  Aligned_cols=116  Identities=19%  Similarity=0.271  Sum_probs=79.2

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .+++|+.|.|+|+++|++||+++|||++..+..    . ...|+..+.  .+..+.+.                      
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~----~-~~~~l~~~~--~~~~~~l~----------------------   53 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG----D-QMAFLRCNS--DHHSIAIA----------------------   53 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC----C-eEEEEECCC--CcceEEEc----------------------
Confidence            589999999999999999999999999865421    1 134444321  11111110                      


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                                                  ....+++.|+||.|+|++++. ++.++++++|+++.
T Consensus        54 --------------------------------------------~~~~~~~~hiaf~v~d~~~l~-~~~~~l~~~Gi~~~   88 (144)
T cd07239          54 --------------------------------------------RGPHPSLNHVAFEMPSIDEVM-RGIGRMIDKGIDIL   88 (144)
T ss_pred             --------------------------------------------cCCCCceEEEEEECCCHHHHH-HHHHHHHHcCCcee
Confidence                                                        001236789999999986664 23334489999998


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .++.....+..+++||+||+||.|||++..
T Consensus        89 ~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          89 WGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             eCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            776443222346789999999999999863

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.70  E-value=6.1e-16  Score=122.65  Aligned_cols=118  Identities=16%  Similarity=0.149  Sum_probs=79.1

Q ss_pred             eeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCc
Q 027676           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (220)
Q Consensus        23 ~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~  102 (220)
                      +++||+|.|+|+++|++||+++|||++..+..   +  ...+...+. ..++.|.+........                
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~----------------   58 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPR----------------   58 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCC----------------
Confidence            47899999999999999999999999976532   1  222322111 1234455532110000                


Q ss_pred             cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcCCe
Q 027676          103 ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~~  179 (220)
                                                                ......++.||||.|+|   +++++++|    +++|++
T Consensus        59 ------------------------------------------~~~~~~~l~Hiaf~v~d~~dvd~~~~~L----~~~Gv~   92 (157)
T cd08347          59 ------------------------------------------GRPGAGTVHHVAFRVPDDEELEAWKERL----EALGLP   92 (157)
T ss_pred             ------------------------------------------CcccCCceEEEEEECCCHHHHHHHHHHH----HHCCCC
Confidence                                                      01122478899999999   67777777    799998


Q ss_pred             eecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          180 ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       180 i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +.. +...  ...+.+||+|||||.|||++..
T Consensus        93 ~~~-~~~~--~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          93 VSG-IVDR--FYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             ccc-cccc--ccEEEEEEECCCCcEEEEEECC
Confidence            643 3222  2347899999999999999975

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.70  E-value=4.7e-16  Score=116.52  Aligned_cols=114  Identities=21%  Similarity=0.248  Sum_probs=75.7

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +++++|+.|.|+|+++|++||+++|||++..+.   +   ..+|+.......+..+.+.                     
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~---~~~~~~~~~~~~~~~~~~~---------------------   54 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEED---D---DRIYLRGLEEFIHHSLVLT---------------------   54 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccC---C---CeEEEEecCCCceEEEEEe---------------------
Confidence            468999999999999999999999999986542   1   1233321100011111110                     


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC---CHHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DVYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~---Dv~a~~~~l~~~~~~~G  177 (220)
                                                                   .....+..|++|.|.   |++++++++    +++|
T Consensus        55 ---------------------------------------------~~~~~~~~hi~~~v~~~~dv~~~~~~l----~~~g   85 (121)
T cd07266          55 ---------------------------------------------KAPVAGLGHIAFRVRSEEDLDKAEAFF----QELG   85 (121)
T ss_pred             ---------------------------------------------eCCCCceeEEEEECCCHHHHHHHHHHH----HHcC
Confidence                                                         011236789999995   555566666    7999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +++...|.....+..+.+|+.|||||.||++..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          86 LPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             CCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            998776433222223789999999999999865

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.70  E-value=5.1e-16  Score=116.60  Aligned_cols=125  Identities=23%  Similarity=0.317  Sum_probs=82.9

Q ss_pred             eeeEEEEECCHHHHHHHHHHhcCCEEEEeecCC-CCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCc
Q 027676           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (220)
Q Consensus        24 l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~  102 (220)
                      ++|++|+|+|++++++||+++|||+.......+ .+.+..+++..    ++..++|...........             
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~l~l~~~~~~~~~~~-------------   63 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL----GNVQIELIEPLDDDSPIA-------------   63 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc----CCEEEEEEEECCCCCcHH-------------
Confidence            579999999999999999999999997654332 22344555543    233444442211100000             


Q ss_pred             cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeec
Q 027676          103 ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR  182 (220)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~  182 (220)
                                                              .-....+.|..|+||.|+|++++++++    +++|+++..
T Consensus        64 ----------------------------------------~~~~~~~~g~~h~~f~v~d~~~~~~~l----~~~G~~~~~   99 (128)
T cd07249          64 ----------------------------------------KFLEKRGEGLHHIAFEVDDIDAALARL----KAQGVRLLQ   99 (128)
T ss_pred             ----------------------------------------HHHhcCCCceEEEEEEeCCHHHHHHHH----HHCCCeeec
Confidence                                                    000123458899999999999999999    799999998


Q ss_pred             CCcccCCCCceEEEEECCC--CCEEEEEe
Q 027676          183 QPGSIPGLNTKITSFVDPD--GWKTVLVD  209 (220)
Q Consensus       183 ~p~~~~~~~~~~~~~~DPd--G~~iElv~  209 (220)
                      +|...+.++..++|+.|||  |++|||++
T Consensus       100 ~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249         100 EGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             cCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            8764333333445555555  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.70  E-value=5.1e-16  Score=116.85  Aligned_cols=111  Identities=16%  Similarity=0.222  Sum_probs=76.1

Q ss_pred             eeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCc
Q 027676           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (220)
Q Consensus        23 ~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~  102 (220)
                      ++.|++|.|+|+++|++||+++|||++..+.   ..  ..+|+..+  ..++.+.|..                      
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~---~~--~~~~~~~~--~~~~~~~l~~----------------------   52 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRP---ED--GALYLRMD--DRAWRIAVHP----------------------   52 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCC---CC--CeEEEEcc--CCceEEEEEe----------------------
Confidence            6899999999999999999999999886542   11  13344321  1222222210                      


Q ss_pred             cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcCCe
Q 027676          103 ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~~  179 (220)
                                                                  ....++.|++|.+++   +++.+++|    +++|++
T Consensus        53 --------------------------------------------~~~~~~~~~~f~v~~~~dl~~~~~~l----~~~Gv~   84 (120)
T cd07252          53 --------------------------------------------GEADDLAYAGWEVADEAALDALAARL----RAAGVA   84 (120)
T ss_pred             --------------------------------------------CCCCceeEEEEEECCHHHHHHHHHHH----HHcCCe
Confidence                                                        011367799999986   66666666    899999


Q ss_pred             eecCCccc--CCCCceEEEEECCCCCEEEEEec
Q 027676          180 ITRQPGSI--PGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       180 i~~~p~~~--~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +...+...  +.+..+++||+|||||.|||+..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          85 VEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             EEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence            98765321  12234789999999999999875

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=1.6e-15  Score=114.03  Aligned_cols=117  Identities=21%  Similarity=0.329  Sum_probs=78.6

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      ++++|+.|.|+|++++++||+++|||++..+.   +   ..++++.+  +....+.+....+..                
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~---~~~~l~~~--~~~~~l~l~~~~~~~----------------   56 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERT---D---STAVLGTG--GKRPLLVLEEDPDAP----------------   56 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C---CEEEEecC--CCeEEEEEEeCCCCC----------------
Confidence            57999999999999999999999999998752   1   23444432  123334443211100                


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcCC
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELGG  178 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~  178 (220)
                                                                .......++.|+||.|+|   ++++++++    +++|+
T Consensus        57 ------------------------------------------~~~~~~~~~~hi~f~v~~~~~v~~~~~~l----~~~g~   90 (125)
T cd07255          57 ------------------------------------------PAPPGATGLYHFAILLPSRADLAAALRRL----IELGI   90 (125)
T ss_pred             ------------------------------------------cccCCCCcEEEEEEECCCHHHHHHHHHHH----HHcCC
Confidence                                                      001223478899999986   55555555    89999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++..+. ..  ...+.+||+|||||.|||....
T Consensus        91 ~~~~~~-~~--~~~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          91 PLVGAS-DH--LVSEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             ceeccc-cc--cceeEEEEECCCCCEEEEEEec
Confidence            875432 22  2237899999999999998764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.70  E-value=7.7e-16  Score=116.25  Aligned_cols=111  Identities=14%  Similarity=0.222  Sum_probs=77.2

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      ++++|+.|.|+|+++|++||+++||++.....    +.+  .++..+   .+..+.+...                    
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~---~~~~l~~~~~--------------------   53 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPF--AVVKLD---NGVSLDFAQP--------------------   53 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCE--EEEEcC---CCcEEEEecC--------------------
Confidence            68999999999999999999999999986531    111  122211   1122222100                    


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHHHHHHHcCCe
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~~  179 (220)
                                                                   ....+..|+||.++  |++++++++    +++|++
T Consensus        54 ---------------------------------------------~~~~~~~h~a~~v~~~dl~~~~~~l----~~~G~~   84 (123)
T cd08351          54 ---------------------------------------------DGEIPPQHYAFLVSEEEFDRIFARI----RERGID   84 (123)
T ss_pred             ---------------------------------------------CCCCCcceEEEEeCHHHHHHHHHHH----HHcCCc
Confidence                                                         00124578999987  578888888    799999


Q ss_pred             eecCCcccC------CCCceEEEEECCCCCEEEEEec
Q 027676          180 ITRQPGSIP------GLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       180 i~~~p~~~~------~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +..+|...+      ..+.+.+||+|||||.|||+++
T Consensus        85 ~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          85 YWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             eecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            987765421      2234899999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.69  E-value=1.2e-15  Score=113.09  Aligned_cols=54  Identities=33%  Similarity=0.438  Sum_probs=47.1

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      +..|++|.|+|++++++++    +++|+++..+|...++ ..+.++|+|||||.|||++
T Consensus        61 ~~~~~~f~v~di~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          61 PGWLVYFAVDDVDAAAARV----EAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             CeEEEEEEeCCHHHHHHHH----HHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            5668999999999999999    7999999988876654 3478999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.5e-15  Score=114.67  Aligned_cols=120  Identities=19%  Similarity=0.240  Sum_probs=81.4

Q ss_pred             eeeeEEEEECCHHHHHHHHHHhc---CCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           23 RFLHAVYRVGDLDRTIKFYTECF---GMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        23 ~l~Hi~l~V~Dle~s~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      +++|++|.|+|++++++||+++|   ||++..+..  .   ...|...   ..+..++|.......+.            
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~---~~~~~~~---~~~~~i~l~~~~~~~~~------------   60 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D---GRSWRAG---DGGTYLVLQQADGESAG------------   60 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c---CceEEec---CCceEEEEEecccCCCc------------
Confidence            47999999999999999999999   999887642  1   1122221   12344555422110000            


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHc
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQEL  176 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~  176 (220)
                                                                  .....++|+.|+||.|+|   ++++++++    +++
T Consensus        61 --------------------------------------------~~~~~~~g~~hia~~v~~~~d~~~~~~~l----~~~   92 (128)
T cd07242          61 --------------------------------------------RHDRRNPGLHHLAFRAPSREAVDELYARL----AKR   92 (128)
T ss_pred             --------------------------------------------ccccCCcCeeEEEEEcCCHHHHHHHHHHH----HHc
Confidence                                                        001224578899999986   66666777    799


Q ss_pred             CCeeecCCccc--CCCCceEEEEECCCCCEEEEEec
Q 027676          177 GGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       177 G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      |+++...+...  .....+.+|++|||||.|||+.+
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          93 GAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             CCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            99999877642  12235789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=4.7e-16  Score=113.45  Aligned_cols=114  Identities=20%  Similarity=0.188  Sum_probs=78.8

Q ss_pred             eeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCcc
Q 027676           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDA  103 (220)
Q Consensus        24 l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~  103 (220)
                      ++|++|.|+|++++++||+++||+++..+...+   ....++..++   ...+++....+...                 
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~---~~~i~l~~~~~~~~-----------------   57 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGD---GPQLHLIEEDPPDA-----------------   57 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCC---CcEEEEEecCCCcc-----------------
Confidence            589999999999999999999999887553221   1223443321   12333322111000                 


Q ss_pred             ccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       104 ~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                                                               ....+.+..|++|.|+|++++++++    +++|+++..+
T Consensus        58 -----------------------------------------~~~~~~~~~~~~~~v~d~~~~~~~l----~~~g~~~~~~   92 (114)
T cd07245          58 -----------------------------------------LPEGPGRDDHIAFRVDDLDAFRARL----KAAGVPYTES   92 (114)
T ss_pred             -----------------------------------------ccCCCcccceEEEEeCCHHHHHHHH----HHcCCCcccc
Confidence                                                     0112346789999999999999999    7899999887


Q ss_pred             CcccCCCCceEEEEECCCCCEEEE
Q 027676          184 PGSIPGLNTKITSFVDPDGWKTVL  207 (220)
Q Consensus       184 p~~~~~~~~~~~~~~DPdG~~iEl  207 (220)
                      +...  ...+.++|.||+|+.|||
T Consensus        93 ~~~~--~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          93 DVPG--DGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             cCCC--CCccEEEEECCCCCEEeC
Confidence            7642  234789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.69  E-value=7.7e-16  Score=116.79  Aligned_cols=112  Identities=14%  Similarity=0.189  Sum_probs=76.9

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.++.|++|.|+|+++|++||+++|||++..+.  +    ...|+..+.  .++.+.+..                    
T Consensus         4 ~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~--~----~~~~l~~~~--~~~~i~l~~--------------------   55 (124)
T cd08361           4 LQDIAYVRLGTRDLAGATRFATDILGLQVAERT--A----KATYFRSDA--RDHTLVYIE--------------------   55 (124)
T ss_pred             EEEeeEEEEeeCCHHHHHHHHHhccCceeccCC--C----CeEEEEcCC--ccEEEEEEe--------------------
Confidence            478999999999999999999999999986542  1    133444321  122222210                    


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G  177 (220)
                                                                     ...+..|+||.|+|   ++++++++    +++|
T Consensus        56 -----------------------------------------------~~~~~~~iaf~v~~~~dv~~~~~~l----~~~G   84 (124)
T cd08361          56 -----------------------------------------------GDPAEQASGFELRDDDALESAATEL----EQYG   84 (124)
T ss_pred             -----------------------------------------------CCCceEEEEEEECCHHHHHHHHHHH----HHcC
Confidence                                                           00245689999987   66666666    8999


Q ss_pred             CeeecCCcccC--CCCceEEEEECCCCCEEEEEech
Q 027676          178 GKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       178 ~~i~~~p~~~~--~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +++...+....  .+..+++||+|||||.||++.+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          85 HEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             CceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            99877653211  12246789999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.1e-15  Score=114.75  Aligned_cols=56  Identities=11%  Similarity=0.169  Sum_probs=47.0

Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCC-eeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGG-KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~-~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .+..|++|.|+|+++++++|    +++|+ ++..+|...+. +.+.++|+|||||+|||.+.
T Consensus        63 ~~~~~l~~~v~dvd~~~~~l----~~~g~~~~~~~~~~~~~-g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          63 SNNFELYFEEEDFDAFLDKL----KRYDNIEYVHPIKEHPW-GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             CCceEEEEEehhhHHHHHHH----HhcCCcEEecCcccCCC-ccEEEEEECCCCCEEEEecc
Confidence            34579999999999999999    68875 78888876654 34889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.69  E-value=1.3e-15  Score=112.93  Aligned_cols=111  Identities=23%  Similarity=0.359  Sum_probs=78.2

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      ++++|+.|.|+|++++++||+++|||++..+..      ..+|+..+. ..++.+.+..                     
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~---------------------   52 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTE---------------------   52 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEe---------------------
Confidence            579999999999999999999999999987531      123443321 1122222210                     


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcCC
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELGG  178 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~  178 (220)
                                                                   ....++.|++|.|++   +++.++++    +++|+
T Consensus        53 ---------------------------------------------~~~~~~~h~~~~v~~~~~v~~~~~~l----~~~g~   83 (117)
T cd07240          53 ---------------------------------------------GDEPGVDALGFEVASEEDLEALAAHL----EAAGV   83 (117)
T ss_pred             ---------------------------------------------CCCCCceeEEEEcCCHHHHHHHHHHH----HHcCC
Confidence                                                         011367899999985   55566656    78999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ++...+...++ ..+.+||.||+||.||++..
T Consensus        84 ~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          84 APEEASDPEPG-VGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             ceEEcCccCCC-CceEEEEECCCCCEEEEEEc
Confidence            99887754443 24789999999999999965

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.68  E-value=1.6e-15  Score=116.15  Aligned_cols=55  Identities=20%  Similarity=0.199  Sum_probs=42.3

Q ss_pred             ceeeEEEEeC--CHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          151 AYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       151 g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ++.||||.|+  |+++++++|    +++|+++..+. +.+.+.++.+||+|||||.|||...
T Consensus        66 ~~~Hiaf~v~~~~ld~~~~~l----~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          66 TYNHIAFKISDSDVDEYTERI----KALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             CceEEEEEcCHHHHHHHHHHH----HHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecC
Confidence            6789999998  566666666    89999876433 2223335899999999999999975

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=6.3e-15  Score=110.65  Aligned_cols=56  Identities=23%  Similarity=0.233  Sum_probs=48.0

Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .+..|+||.|+|++++++++    +++|+++..+|...+.+ .+.++++|||||.|+|.++
T Consensus        67 ~~~~~~~~~v~d~d~~~~~l----~~~G~~v~~~~~~~~~g-~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          67 AGTQGVYVVVDDVDAHYERA----RAAGAEILREPTDTPYG-SREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             CceEEEEEEECCHHHHHHHH----HHCCCEEeeCccccCCC-cEEEEEECCCCCEEEEecC
Confidence            45678999999999999999    78999999998876643 4789999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=8e-15  Score=109.27  Aligned_cols=118  Identities=19%  Similarity=0.233  Sum_probs=81.3

Q ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCccccc
Q 027676           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGM  106 (220)
Q Consensus        27 i~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~~g~  106 (220)
                      +.|+|+|+++|++||+++||+++..+...+.+.+...++..+    ...+.+.......                     
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~---------------------   59 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG----DSVLMLADEFPEH---------------------   59 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC----CEEEEEecCCccc---------------------
Confidence            468999999999999999999998765434443333344332    1223332110000                     


Q ss_pred             eEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcc
Q 027676          107 KLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS  186 (220)
Q Consensus       107 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~  186 (220)
                                                         . .+.....+..|++|.|+|++++++++    .+.|+++..+|..
T Consensus        60 -----------------------------------~-~~~~~~~~~~~~~~~v~d~~~~~~~l----~~~G~~~~~~~~~   99 (122)
T cd07246          60 -----------------------------------G-SPASWGGTPVSLHLYVEDVDATFARA----VAAGATSVMPPAD   99 (122)
T ss_pred             -----------------------------------C-CCCCCCCceEEEEEEeCCHHHHHHHH----HHCCCeEecCccc
Confidence                                               0 00112335679999999999999999    6899999988875


Q ss_pred             cCCCCceEEEEECCCCCEEEEEec
Q 027676          187 IPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       187 ~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .+. +.+.++++|||||.|||.+.
T Consensus       100 ~~~-g~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246         100 QFW-GDRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             ccc-cceEEEEECCCCCEEEEecC
Confidence            544 34789999999999999873

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.67  E-value=5e-15  Score=112.96  Aligned_cols=125  Identities=20%  Similarity=0.278  Sum_probs=80.6

Q ss_pred             eeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCc
Q 027676           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (220)
Q Consensus        23 ~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~  102 (220)
                      +++|+.|.|+|+++|++||+++|||++..+...    ...+|+..+. ..+..+.+....+.                  
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~-~~~~~l~l~~~~~~------------------   57 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDP-DEHHQIALITGRPA------------------   57 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecC-CCceEEEEEecCCC------------------
Confidence            589999999999999999999999998765321    1234444320 12223333211100                  


Q ss_pred             cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeec
Q 027676          103 ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR  182 (220)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~  182 (220)
                                                               .......++.|+||.|+|+++ ++.+.+++.++|+++..
T Consensus        58 -----------------------------------------~~~~~~~~~~h~~f~v~~~~~-v~~~~~~l~~~G~~~~~   95 (134)
T cd08348          58 -----------------------------------------APPPGPAGLNHIAFEVDSLDD-LRDLYERLRAAGITPVW   95 (134)
T ss_pred             -----------------------------------------CCCCCCCCceEEEEEeCCHHH-HHHHHHHHHHCCCCccc
Confidence                                                     000123478899999998653 22233333789999876


Q ss_pred             CCcccCCCCceEEEEECCCCCEEEEEechhhhh
Q 027676          183 QPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  215 (220)
Q Consensus       183 ~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~~~  215 (220)
                      ++..  + ..+.+|++||+||.|||++...-+.
T Consensus        96 ~~~~--~-~~~~~~~~DP~G~~ie~~~~~~~~~  125 (134)
T cd08348          96 PVDH--G-NAWSIYFRDPDGNRLELFVDTPWYV  125 (134)
T ss_pred             cCCC--C-ceeEEEEECCCCCEEEEEEcCCCCh
Confidence            5532  2 2478999999999999998765443

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.66  E-value=2.2e-15  Score=115.50  Aligned_cols=57  Identities=23%  Similarity=0.286  Sum_probs=44.1

Q ss_pred             CceeeEEEEeCC--HHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          150 NAYAQVAISTDD--VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       150 ~g~~Hiaf~v~D--v~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .++.||||.|++  +++++++|    +++|+++..++..... ..+.+||+|||||.|||.+..
T Consensus        58 ~~~~hiaf~v~~~dld~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          58 QSYTHIAFTIEDSEFDAFYTRL----KEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             ccceEEEEEecHHHHHHHHHHH----HHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCc
Confidence            378899999985  66777776    7999998765543222 347899999999999999864

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.66  E-value=4.8e-15  Score=110.37  Aligned_cols=110  Identities=19%  Similarity=0.309  Sum_probs=75.6

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.+++|+.|.|+|+++|++||++ |||+...+.  + +   ..|+..+. ..+..+.+.                     
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~--~-~---~~~~~~~~-~~~~~~~~~---------------------   51 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAART--D-D---ELYYRGYG-TDPFVYVAR---------------------   51 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEec--C-C---eEEEecCC-CccEEEEcc---------------------
Confidence            36899999999999999999999 999986552  1 1   23333210 111111000                     


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  180 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i  180 (220)
                                                                   ....+++.|++|.|+|.+++.+.+    ++.|+++
T Consensus        52 ---------------------------------------------~~~~~~~~~~af~v~~~~~~~~~~----~~~g~~~   82 (113)
T cd07267          52 ---------------------------------------------KGEKARFVGAAFEAASRADLEKAA----ALPGASV   82 (113)
T ss_pred             ---------------------------------------------cCCcCcccEEEEEECCHHHHHHHH----HcCCCee
Confidence                                                         011236789999999998877777    6889887


Q ss_pred             ecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          181 TRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       181 ~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ...+. .|. +.+.+||+|||||.|||+..
T Consensus        83 ~~~~~-~~~-~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          83 IDDLE-APG-GGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             ecCCC-CCC-CceEEEEECCCCCEEEEEec
Confidence            75543 333 34789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.66  E-value=3.1e-15  Score=129.77  Aligned_cols=119  Identities=20%  Similarity=0.277  Sum_probs=78.3

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCce-eEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY-SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      ..++++||+|.|+|+++|++||+++|||++..+...+.+.. ...|+..+.  .+..+                    + 
T Consensus       142 ~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------------------~-  198 (303)
T TIGR03211       142 GARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSN--KAHDI--------------------A-  198 (303)
T ss_pred             CceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCC--CCccc--------------------c-
Confidence            45789999999999999999999999999876543332221 122332110  00000                    0 


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHH---HHHHHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK---SAEVVNLVTQE  175 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a---~~~~l~~~~~~  175 (220)
                                              ++.                    ....++++||||.|+|+++   ++++|    ++
T Consensus       199 ------------------------~~~--------------------~~~~g~~~Hiaf~v~~~~~v~~~~~~l----~~  230 (303)
T TIGR03211       199 ------------------------FVG--------------------DPEPGKLHHVSFFLDSWEDVLKAADVM----SK  230 (303)
T ss_pred             ------------------------eec--------------------CCCCCceEEEEEEcCCHHHHHHHHHHH----Hh
Confidence                                    000                    0011238899999998543   44455    89


Q ss_pred             cCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          176 LGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       176 ~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      +|+++..+|...+....+++||+|||||.||++.
T Consensus       231 ~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       231 NDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             CCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            9999988776543223478999999999999984

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.66  E-value=3.3e-15  Score=128.90  Aligned_cols=123  Identities=23%  Similarity=0.268  Sum_probs=80.1

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      ..++++|++|.|+|+++|++||+++|||++..+...+.+.+...|+...  ..++.+                       
T Consensus       133 ~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----------------------  187 (294)
T TIGR02295       133 SPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRK--GGVHDI-----------------------  187 (294)
T ss_pred             cceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecC--CCcCce-----------------------
Confidence            4589999999999999999999999999987654333332222332210  000000                       


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCe
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~  179 (220)
                                                          .+.       ..++.+++|+||.|+|.++ +..+.++++++|++
T Consensus       188 ------------------------------------~~~-------~~~~~~~~Hiaf~v~d~~~-v~~~~~~l~~~G~~  223 (294)
T TIGR02295       188 ------------------------------------ALT-------NGNGPRLHHIAYWVHDPLN-IIKACDILASAGLS  223 (294)
T ss_pred             ------------------------------------Eee-------cCCCCceeeEEEEcCCHHH-HHHHHHHHHhCCCC
Confidence                                                000       0123478999999999543 23333444899998


Q ss_pred             --eecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          180 --ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       180 --i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                        +...|.....+...++|++||+||.||++...
T Consensus       224 ~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       224 DSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             cccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence              65566543222346799999999999998754

The enzyme from Bacillus brevis contains manganese.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.65  E-value=5.2e-15  Score=110.38  Aligned_cols=112  Identities=23%  Similarity=0.330  Sum_probs=75.6

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .+++|+.|.|+|+++|++||+++|||+......      ...++..+ ....+.+.+.                      
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~-~~~~~~~~~~----------------------   52 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRAT-GSEHHILRLR----------------------   52 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECC-CCccEEEEec----------------------
Confidence            579999999999999999999999999875421      12333321 1111111110                      


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcCC
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELGG  178 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~  178 (220)
                                                                  ....+++.|++|.|++   ++++++++    +++|+
T Consensus        53 --------------------------------------------~~~~~~~~~~~~~v~~~~~l~~~~~~l----~~~G~   84 (120)
T cd08362          53 --------------------------------------------RSDRNRLDVVSFSVASRADVDALARQV----AARGG   84 (120)
T ss_pred             --------------------------------------------cCCCCCCceEEEEeCCHHHHHHHHHHH----HHcCC
Confidence                                                        0012256799999964   55555555    89999


Q ss_pred             eeecCCcccC-CCCceEEEEECCCCCEEEEEec
Q 027676          179 KITRQPGSIP-GLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       179 ~i~~~p~~~~-~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ++..+|.... .+..+.++|+||+||.|||+..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          85 TVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             ceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence            9987764321 1235789999999999999875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=6.4e-15  Score=110.62  Aligned_cols=58  Identities=22%  Similarity=0.237  Sum_probs=42.2

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCC--CCceEEEEECCCCCEEEEEe
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iElv~  209 (220)
                      +..||||.|+|. +.++.+.++++++|+++..+|...+.  ...+.+||+|||||.|||+.
T Consensus        64 ~~~hi~f~v~~~-~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~~  123 (123)
T cd07262          64 NGTHVAFAAPSR-EAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAVC  123 (123)
T ss_pred             CceEEEEECCCH-HHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEeC
Confidence            356999999984 23333444448999999888765543  23367999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=9.8e-15  Score=108.87  Aligned_cols=52  Identities=21%  Similarity=0.135  Sum_probs=45.5

Q ss_pred             eeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          153 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       153 ~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      .|++|.|+|++++++++    +++|+++..+|...+.+ .+.++|+|||||.|||+|
T Consensus        68 ~~~~~~v~did~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          68 LILNFEVDDVDAEYERL----KAEGLPIVLPLRDEPWG-QRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             EEEEEEECCHHHHHHHH----HhcCCCeeeccccCCCc-ceEEEEECCCCCEEEEEC
Confidence            38999999999999999    78999998888766543 488999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=7.3e-15  Score=110.22  Aligned_cols=54  Identities=22%  Similarity=0.239  Sum_probs=46.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ..|++|.|+|++++++++    +++|+++..+|...+.+ .+.++++|||||.|||+++
T Consensus        72 ~~~~~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          72 GFEIAFVTDDVAAAFARA----VEAGAVLVSEPKEKPWG-QTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             cEEEEEEcCCHHHHHHHH----HHcCCEeccCCccCCCC-cEEEEEECCCCCEEEEecC
Confidence            358999999999999999    79999999888766654 4788999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=1.4e-14  Score=107.15  Aligned_cols=55  Identities=20%  Similarity=0.175  Sum_probs=47.1

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ...|++|.|+|++++++++    +++|+++..+|...+. +.+.+|+.||+||.|||+++
T Consensus        57 ~~~~i~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          57 VVPDLSIEVDDVDAALARA----VAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             CCCEEEEEeCCHHHHHHHH----HhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEc
Confidence            3468999999999999999    7999999888876554 34789999999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.63  E-value=6.8e-15  Score=110.76  Aligned_cols=108  Identities=28%  Similarity=0.407  Sum_probs=73.4

Q ss_pred             eeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCc
Q 027676           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (220)
Q Consensus        23 ~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~  102 (220)
                      +++|+.|.|+|++++++||+++|||++.....  +    .+++..+    ...+.+....                    
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~----~~~~~l~~~~--------------------   50 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAG----DLWLCLSVDA--------------------   50 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecC----CEEEEEecCC--------------------
Confidence            47899999999999999999999999876532  1    1233221    1111110000                    


Q ss_pred             cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEe--CCHHHHHHHHHHHHHHcCCee
Q 027676          103 ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--DDVYKSAEVVNLVTQELGGKI  180 (220)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v--~Dv~a~~~~l~~~~~~~G~~i  180 (220)
                                                                .....++..|+||.+  +|++++++++    +++|+++
T Consensus        51 ------------------------------------------~~~~~~~~~hi~f~v~~~dl~~~~~~l----~~~G~~~   84 (121)
T cd07244          51 ------------------------------------------NVGPAKDYTHYAFSVSEEDFASLKEKL----RQAGVKE   84 (121)
T ss_pred             ------------------------------------------CCCCCCCeeeEEEEeCHHHHHHHHHHH----HHcCCcc
Confidence                                                      001123678999999  4577777777    7999998


Q ss_pred             ecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          181 TRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       181 ~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ..++.. +   .+.+||.|||||.|||+..
T Consensus        85 ~~~~~~-~---~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          85 WKENTS-E---GDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             cCCCCC-C---ccEEEEECCCCCEEEEEeC
Confidence            765442 1   3689999999999999974

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.62  E-value=1.2e-14  Score=106.39  Aligned_cols=55  Identities=25%  Similarity=0.358  Sum_probs=46.5

Q ss_pred             CCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEE
Q 027676          149 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  208 (220)
Q Consensus       149 ~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  208 (220)
                      ..+..|++|.|+|++++++++    +++|+++..+|...+.+ .+.++++|||||.|||+
T Consensus        54 ~~~~~~~~~~v~dv~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   54 PGGGFHLCFEVEDVDALYERL----KELGAEIVTEPRDDPWG-QRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             SSSEEEEEEEESHHHHHHHHH----HHTTSEEEEEEEEETTS-EEEEEEE-TTS-EEEEE
T ss_pred             CCceeEEEEEEcCHHHHHHHH----HHCCCeEeeCCEEcCCC-eEEEEEECCCCCEEEeC
Confidence            457889999999999999999    79999999988875553 48899999999999986

...

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=1e-14  Score=109.28  Aligned_cols=56  Identities=16%  Similarity=0.160  Sum_probs=42.6

Q ss_pred             ceeeEE--EEeCCHHHHHHHHHHHHHHcCCeeecCCccc-CC--CCceEEEEECCCCCEEEEEec
Q 027676          151 AYAQVA--ISTDDVYKSAEVVNLVTQELGGKITRQPGSI-PG--LNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       151 g~~Hia--f~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~-~~--~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +..|++  |.++|+++++++|    +++|+++..+|... ++  +..+.+||+|||||.|||..+
T Consensus        65 ~~~h~~~~~~~~dv~~~~~~l----~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          65 PVPHFGLILSEEEFDALAERL----EAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             CCceEEEEEeHHHHHHHHHHH----HHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            455765  5668888888888    79999999877532 11  234889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.60  E-value=2.2e-14  Score=105.89  Aligned_cols=56  Identities=20%  Similarity=0.316  Sum_probs=41.5

Q ss_pred             CceeeEEEEeC--CHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          150 NAYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       150 ~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .+..|+||.|+  |++++++++    +++|+++...+... ....+.+|++|||||.|||++-
T Consensus        54 ~~~~hiaf~v~~~d~~~~~~~l----~~~G~~~~~~~~~~-~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          54 RTYTHIAFQIQSEEFDEYTERL----KALGVEMKPERPRV-QGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             CCccEEEEEcCHHHHHHHHHHH----HHcCCccCCCcccc-CCCceEEEEECCCCCEEEEEeC
Confidence            35789999995  566666666    79999986543322 2224789999999999999863

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.60  E-value=2.9e-14  Score=122.95  Aligned_cols=118  Identities=20%  Similarity=0.296  Sum_probs=78.5

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCC--C-ceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE--E-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~--~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ..+++|++|.|+|+++|++||+++|||++..+...+.  + .+..+|+..++  .++.+.+.                  
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~--~~~~~~l~------------------  199 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNE--RHHSLAFA------------------  199 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECC--CcceEEEe------------------
Confidence            4689999999999999999999999999876532211  1 11233443211  11111110                  


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHH---HHHHHHHHHH
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK---SAEVVNLVTQ  174 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a---~~~~l~~~~~  174 (220)
                                                 .                    .....+++||||.|+|+++   ++++|    +
T Consensus       200 ---------------------------~--------------------~~~~~~~~Hiaf~v~d~~~v~~~~~~l----~  228 (286)
T TIGR03213       200 ---------------------------A--------------------GPSEKRLNHLMLEVDTLDDVGLALDRV----D  228 (286)
T ss_pred             ---------------------------c--------------------CCCCCceEEEEEEcCCHHHHHHHHHHH----H
Confidence                                       0                    0123478999999999765   45555    8


Q ss_pred             HcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          175 ELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       175 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ++|+ +...|...+.+..+++|++||+|+.||+...
T Consensus       229 ~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       229 ADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             HCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence            9999 5555554433445789999999999999863

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=3.9e-14  Score=105.69  Aligned_cols=120  Identities=21%  Similarity=0.254  Sum_probs=77.7

Q ss_pred             eeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCcc
Q 027676           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDA  103 (220)
Q Consensus        24 l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~  103 (220)
                      +.|+.|+|.|+++|++||+++|||++..+   +++.  .+++..++  . ..+.+.......  ..+             
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~--~~~l~~~~--~-~~~~l~~~~~~~--~~~-------------   57 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRR--LAFFWVGG--R-GMLLLFDPGATS--TPG-------------   57 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCc--eEEEEcCC--C-cEEEEEecCCcc--ccc-------------
Confidence            46899999999999999999999998764   2222  34444322  1 233332111000  000             


Q ss_pred             ccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHHHHHHHcCCeee
Q 027676          104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       104 ~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                                            ...+.....+..|+||.++  |++++++++    .++|+++.
T Consensus        58 --------------------------------------~~~~~~~~~~~~~~~~~v~~~dl~~~~~~l----~~~g~~~~   95 (122)
T cd08354          58 --------------------------------------GEIPPHGGSGPGHFAFAIPAEELAEWEAHL----EAKGVAIE   95 (122)
T ss_pred             --------------------------------------CCCCCCCCCCccEEEEEcCHHHHHHHHHHH----HhcCCcee
Confidence                                                  0000112347889999995  677777777    79999987


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .++..  ....+.+||+|||||.|||+++
T Consensus        96 ~~~~~--~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          96 SEVQW--PRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             ccccC--CCCeeEEEEECCCCCEEEEecC
Confidence            76542  2234789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.60  E-value=2.6e-14  Score=124.03  Aligned_cols=116  Identities=21%  Similarity=0.282  Sum_probs=77.9

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +++++|++|.|+|+++|++||+++|||++..+..   .   .+++.......+..+.+.                     
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~---~---~~~~~~~~~~~~~~~~l~---------------------   54 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG---Q---RVYLKAWDEWDHYSVILT---------------------   54 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC---c---eEEEEeccccccceEeec---------------------
Confidence            5789999999999999999999999999876531   1   222221100011111110                     


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC---CHHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DVYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~---Dv~a~~~~l~~~~~~~G  177 (220)
                                                                   .....++.|+||.|+   |+++++++|    +++|
T Consensus        55 ---------------------------------------------~~~~~g~~hiaf~v~~~~dl~~~~~~l----~~~G   85 (303)
T TIGR03211        55 ---------------------------------------------EADTAGLDHMAFKVESEADLERLVKRL----EAYG   85 (303)
T ss_pred             ---------------------------------------------cCCCCceeEEEEEeCCHHHHHHHHHHH----HHcC
Confidence                                                         011236889999998   455556666    8999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++...+.....+.++.+||+|||||.|||++...
T Consensus        86 ~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~  120 (303)
T TIGR03211        86 VGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKE  120 (303)
T ss_pred             CCeeeccCCCCCCcceEEEEECCCCCEEEEEEccc
Confidence            99876654211222377999999999999998654

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=6e-14  Score=104.97  Aligned_cols=58  Identities=12%  Similarity=0.092  Sum_probs=44.3

Q ss_pred             CceeeEEEEeCC---HHHHHHHHHHHHHHcCCeeecCCcccCC-CCceEEEEECCCCCEEEEEech
Q 027676          150 NAYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPG-LNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       150 ~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~~i~~~p~~~~~-~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +++.|+||.|+|   +++.++++    .++|+++..+|..... ...+.+|++||+||.|||+...
T Consensus        57 ~~~~h~~f~v~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          57 GGLNHLGVQVDSAEEVAEAKARA----EAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHH----HHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence            478899999998   45555555    8999999877654322 2347899999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.59  E-value=5.4e-14  Score=105.41  Aligned_cols=53  Identities=19%  Similarity=0.122  Sum_probs=43.0

Q ss_pred             ceeeEEEEeC---CHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEE
Q 027676          151 AYAQVAISTD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  208 (220)
Q Consensus       151 g~~Hiaf~v~---Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  208 (220)
                      +..|++|.++   |++++++++    +++|+++..+|...+.+ .+.++|+|||||.|||+
T Consensus        66 ~~~~l~~~~~~~~dvd~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  121 (122)
T cd07235          66 HRIALAFLCETPAEVDALYAEL----VGAGYPGHKEPWDAPWG-QRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CcEEEEEEcCCHHHHHHHHHHH----HHCCCCcCCCCccCCCC-CEEEEEECCCCCEEEEe
Confidence            4568888876   677888887    79999998888765543 47899999999999997

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.59  E-value=5.9e-14  Score=104.21  Aligned_cols=48  Identities=23%  Similarity=0.235  Sum_probs=37.4

Q ss_pred             EEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          155 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       155 iaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      ++|.++|++++++++    +++|+++..++..  . ..+.+||.|||||.|||..
T Consensus        61 ~~~~~~d~~~~~~~l----~~~Gi~~~~~~~~--~-~~~~~~~~DP~Gn~iel~~  108 (112)
T cd08344          61 FGIFEDDFAAFARHL----EAAGVALAAAPPG--A-DPDGVWFRDPDGNLLQVKV  108 (112)
T ss_pred             EEeEhhhHHHHHHHH----HHcCCceecCCCc--C-CCCEEEEECCCCCEEEEec
Confidence            445568898888888    7899998876532  2 2357999999999999985

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=4.8e-14  Score=104.47  Aligned_cols=54  Identities=24%  Similarity=0.214  Sum_probs=42.9

Q ss_pred             CceeeEEEEeCC---HHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          150 NAYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       150 ~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      .+..|+||.|+|   ++++++++    +++|+++..+|...+.+  +.++|+|||||.|||+.
T Consensus        58 ~~~~~~~~~v~~~~~~~~~~~~~----~~~g~~v~~~~~~~~~g--~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          58 GGGSELAFMVDDGAAVDALYAEW----QAKGVKIIQEPTEMDFG--YTFVALDPDGHRLRVFA  114 (114)
T ss_pred             CCceEEEEEcCCHHHHHHHHHHH----HHCCCeEecCccccCCc--cEEEEECCCCCEEEeeC
Confidence            367899999987   55555555    89999999888765443  67899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=5.3e-14  Score=106.10  Aligned_cols=53  Identities=26%  Similarity=0.204  Sum_probs=42.8

Q ss_pred             ceeeEEEEeCC---HHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          151 AYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       151 g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      +..|+||.|++   ++++++++    +++|+++..+|...++  .+.+||+|||||.|||+.
T Consensus        68 ~~~~l~f~v~~~~~vd~~~~~l----~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          68 TEVLISLSADSREEVDELVEKA----LAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHH----HHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            45699999985   55666666    8999999988876543  367899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.57  E-value=8.1e-14  Score=104.60  Aligned_cols=53  Identities=21%  Similarity=0.167  Sum_probs=42.1

Q ss_pred             eeEEEEeCCHHHHHHHHHHHHHHcCCeee-------cCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          153 AQVAISTDDVYKSAEVVNLVTQELGGKIT-------RQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       153 ~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~-------~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .|++|.|+|+++++++|    +++|+++.       .++...+. +.+.++|+|||||.|||.+.
T Consensus        60 ~~~~~~v~dvd~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          60 FGCCLRLPDVAALHAEF----RAAGLPETGSGIPRITPPEDQPW-GMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             ceEEEEeCCHHHHHHHH----HHhCccccccCCCcccCCcCCCC-ceeEEEEECCCCCEEEeecC
Confidence            47999999999999999    78999853       23332233 35889999999999999885

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.57  E-value=1.1e-13  Score=101.48  Aligned_cols=54  Identities=22%  Similarity=0.221  Sum_probs=44.3

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCe-eecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGK-ITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~-i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      +..|++|.++|++++++++    +++|++ +..++...+. +.+.++++||+|+.|||+|
T Consensus        58 ~~~~~~~~~~~~~~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          58 RGGSVYIEVEDVDALYAEL----KAKGADLIVYPPEDQPW-GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             CcEEEEEEeCCHHHHHHHH----HHcCCcceecCccCCCc-ccEEEEEECCCCCEEEecC
Confidence            4568999999999999999    789998 6666655444 3478999999999999985

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.57  E-value=6.5e-14  Score=120.83  Aligned_cols=113  Identities=23%  Similarity=0.304  Sum_probs=77.1

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.+++|+.|.|+|+++|++||+++|||++..+..      ...|+.......+..+.+.                     
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~---------------------   54 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLT---------------------   54 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEee---------------------
Confidence            5789999999999999999999999999876521      1233321100011111110                     


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC---CHHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DVYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~---Dv~a~~~~l~~~~~~~G  177 (220)
                                                            .       ....++.|+||.|+   |+++++++|    +++|
T Consensus        55 --------------------------------------~-------~~~~~~~hiaf~v~~~~dl~~~~~~l----~~~G   85 (294)
T TIGR02295        55 --------------------------------------K-------APSAALSYIGFRVSKEEDLDKAADFF----QKLG   85 (294)
T ss_pred             --------------------------------------e-------CCCcCccEEEEEeCCHHHHHHHHHHH----HhcC
Confidence                                                  0       11236789999998   455566666    8999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++...+.+  + ..+.+||+|||||.|||+....
T Consensus        86 v~v~~~~~~--~-~~~~~~~~DPdG~~iEl~~~~~  117 (294)
T TIGR02295        86 HPVRLVRDG--G-QPEALRVEDPFGYPIEFYFEME  117 (294)
T ss_pred             CcEEeecCC--C-CceEEEEECCCCCEEEEEEchh
Confidence            998776543  2 2388999999999999998544

The enzyme from Bacillus brevis contains manganese.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.56  E-value=1.4e-13  Score=98.98  Aligned_cols=112  Identities=26%  Similarity=0.364  Sum_probs=77.6

Q ss_pred             eEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCcccc
Q 027676           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALG  105 (220)
Q Consensus        26 Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~~g  105 (220)
                      |+.|.|+|++++++||+++||++...+...  .....+++..+    +..+++....+..                    
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~--------------------   54 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPA--------------------   54 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCC--------------------
Confidence            899999999999999999999998876432  11233333321    2334443211100                    


Q ss_pred             ceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCc
Q 027676          106 MKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  185 (220)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~  185 (220)
                                                             ....+.+..|+||.|+|+++++++|    +++|+.+..++.
T Consensus        55 ---------------------------------------~~~~~~~~~~~~~~v~~~~~~~~~l----~~~g~~~~~~~~   91 (112)
T cd06587          55 ---------------------------------------PAPSGGGGVHLAFEVDDVDAAYERL----KAAGVEVLGEPR   91 (112)
T ss_pred             ---------------------------------------CcccCCCeeEEEEECCCHHHHHHHH----HHcCCcccCCCc
Confidence                                                   0012347889999999998888888    789999887775


Q ss_pred             ccCCCCceEEEEECCCCCEEEE
Q 027676          186 SIPGLNTKITSFVDPDGWKTVL  207 (220)
Q Consensus       186 ~~~~~~~~~~~~~DPdG~~iEl  207 (220)
                      . +....+.+++.||+|+.|||
T Consensus        92 ~-~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          92 E-EPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             C-CCCCcEEEEEECCCCcEEeC
Confidence            2 12335889999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.50  E-value=2.7e-13  Score=100.67  Aligned_cols=96  Identities=20%  Similarity=0.258  Sum_probs=70.0

Q ss_pred             eeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCccc
Q 027676           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDAL  104 (220)
Q Consensus        25 ~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~~  104 (220)
                      +||+|.|+|++++++||+++||++.......+.......++..+.  ....+||..+.+..                   
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~--~~~~iELi~p~~~~-------------------   59 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGD--GPVQIELIQPLDGD-------------------   59 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETT--ETEEEEEEEESSTT-------------------
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCC--CcEEEEEEEeCCCC-------------------
Confidence            699999999999999999999999877666555556666655432  11445554332111                   


Q ss_pred             cceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcc-cccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          105 GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       105 g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                                                             .+ ...+.|++||||.|+|+++++++|    +++|+++...
T Consensus        60 ---------------------------------------~~~~~~~~gi~Hia~~v~D~d~~~~~l----~~~G~~~~~~   96 (109)
T PF13669_consen   60 ---------------------------------------SPLDRGGGGIHHIAFEVDDLDAAIARL----EAQGFRVLDE   96 (109)
T ss_dssp             ---------------------------------------CHHHHTSSEEEEEEEEESHHHHHHHHH----HHTTECEEEC
T ss_pred             ---------------------------------------cccccCCCCEEEEEEEeCCHHHHHHHH----HHCCCEEccc
Confidence                                                   01 125679999999999999999999    7999998866


Q ss_pred             C
Q 027676          184 P  184 (220)
Q Consensus       184 p  184 (220)
                      +
T Consensus        97 ~   97 (109)
T PF13669_consen   97 G   97 (109)
T ss_dssp             E
T ss_pred             C
Confidence            4

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.50  E-value=4.1e-13  Score=115.76  Aligned_cols=114  Identities=17%  Similarity=0.176  Sum_probs=76.1

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.+++|+.|.|+|+++|++||+++|||+...+.  +.   ...|+..+.  .++.+.+..                    
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~--~~---~~~~~~~~~--~~~~~~l~~--------------------   53 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEG--EN---DALYLRLDS--RAHRIAVHP--------------------   53 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCC--CC---ceEEEEcCC--CceEEEEEE--------------------
Confidence            368999999999999999999999999876532  11   122433321  122121210                    


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G  177 (220)
                                                                    ....++.|++|.|+|   ++++.++|    +++|
T Consensus        54 ----------------------------------------------~~~~~~~~~~f~V~~~~~l~~~~~~L----~~~G   83 (286)
T TIGR03213        54 ----------------------------------------------GESDDLAYAGWEVADEAGLDQVKEKL----EKAG   83 (286)
T ss_pred             ----------------------------------------------CCcCCeeeEeeeeCCHHHHHHHHHHH----HHcC
Confidence                                                          001256789999999   55555555    8999


Q ss_pred             CeeecCCcccC--CCCceEEEEECCCCCEEEEEech
Q 027676          178 GKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       178 ~~i~~~p~~~~--~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +++...+....  .+..+.++|+|||||.|||+...
T Consensus        84 v~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~  119 (286)
T TIGR03213        84 VAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGA  119 (286)
T ss_pred             CceEECCHHHhhhccceEEEEEECCCCCEEEEEEcc
Confidence            99877653211  12247899999999999999753

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>PLN02300 lactoylglutathione lyase

Probab=99.50  E-value=7.4e-13  Score=114.43  Aligned_cols=118  Identities=45%  Similarity=0.736  Sum_probs=93.9

Q ss_pred             CceeEEEEEeCc----------cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC
Q 027676           91 TGFGHFAIATED----------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  160 (220)
Q Consensus        91 ~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~  160 (220)
                      .++.|+++.|+|          ++|+++....+.+...+..+++.++++..+..+++..+.+......+.|+.|+||.|+
T Consensus        23 ~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~~v~  102 (286)
T PLN02300         23 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVE  102 (286)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEEEeC
Confidence            568899999998          5899988766555556667778776555567788876554444445678999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       161 Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      |++++++++    +++|+++..+|...+++..+++||+|||||.|||+++..
T Consensus       103 dvd~~~~~l----~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  150 (286)
T PLN02300        103 DVAKTVELV----KAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGP  150 (286)
T ss_pred             CHHHHHHHH----HHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Confidence            999999999    799999998887776655578899999999999999753

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.47  E-value=1.3e-12  Score=97.46  Aligned_cols=52  Identities=19%  Similarity=0.135  Sum_probs=40.6

Q ss_pred             eeEEEEeCCHHHHHHHHHHHHHHcCCeeec-----CCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          153 AQVAISTDDVYKSAEVVNLVTQELGGKITR-----QPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       153 ~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~-----~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      .|++|.|+|+++++++|    +++|+++..     ++...+. +.+.++|+|||||+|+|.+
T Consensus        57 ~~~~~~v~did~~~~~l----~~~G~~~~~~~~~~~~~~~~~-g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          57 SMLHLEVDDLEAYYEHI----KALGLPKKFPGVKLPPITQPW-WGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             CEEEEEECCHHHHHHHH----HHcCCcccccceecCccccCC-CcEEEEEECCCccEEEeeC
Confidence            46899999999999999    789987543     2332233 3488999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.46  E-value=2.1e-12  Score=95.99  Aligned_cols=51  Identities=20%  Similarity=0.238  Sum_probs=39.9

Q ss_pred             eEEEEe---CCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          154 QVAIST---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       154 Hiaf~v---~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      |++|.+   +|++++++++    ++.|+++..++...+. +.+.++++||+||.|||..
T Consensus        67 ~~~~~~~~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          67 TLAHNVRSEEEVDAVLARA----AAAGATIVKPPQDVFW-GGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             EEEEEcCCHHHHHHHHHHH----HhCCCEEecCCccCCC-CceEEEEECCCCCEEEEee
Confidence            455554   6777777777    7899999888766554 3588999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.41  E-value=7e-13  Score=109.46  Aligned_cols=108  Identities=42%  Similarity=0.699  Sum_probs=93.4

Q ss_pred             CceeEEEEEeCc----------cccceEEEeecCCC-----------CceEEEEeeccCCCCceEEEEEEecCCcccccC
Q 027676           91 TGFGHFAIATED----------ALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKG  149 (220)
Q Consensus        91 ~~~~~~~~~~~~----------~~g~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~  149 (220)
                      ++..|+.|+|.|          ++||++++..+.++           .||+.+|++||++++|.++|||+|++...+.-|
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~YelG   95 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYELG   95 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceecc
Confidence            567788999988          58999999999888           899999999999999999999999999999999


Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +++.||++.++|+-..++++    ...|.+         +++...+++.||||+.+++++..
T Consensus        96 ndfg~i~I~s~dv~~~ve~v----~~p~~~---------~~g~~~~~v~dPdGykF~l~~~~  144 (299)
T KOG2943|consen   96 NDFGGITIASDDVFSKVEKV----NAPGGK---------GSGCGIAFVKDPDGYKFYLIDRG  144 (299)
T ss_pred             CCcccEEEeHHHHHHHHHHh----cCcCCc---------ccceEEEEEECCCCcEEEEeccC
Confidence            99999999999988888877    333331         23346799999999999999843

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.40  E-value=7.3e-12  Score=95.39  Aligned_cols=119  Identities=25%  Similarity=0.319  Sum_probs=82.2

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecC-CCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGP-EQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      -...+.|..|.|.|++++++||+++|||++....+.  +.+..+....+. ...+.   |.                   
T Consensus         6 ~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~--~~~~y~~f~~~~~~~gG~---l~-------------------   61 (127)
T COG3324           6 EKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDM--GEMRYAVFPADGAGAGGG---LM-------------------   61 (127)
T ss_pred             cCCccEEEeeecCCHHHHHHHHHHhhCceecccccC--CCceEEEEECCCccccce---ec-------------------
Confidence            346789999999999999999999999999765332  222322221110 00000   00                   


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                . ..                                ....+..-.+|-|.|+|+++.++++    +++|.
T Consensus        62 ----------~-~~--------------------------------~~~p~~~~~~iy~~v~did~~l~rv----~~~GG   94 (127)
T COG3324          62 ----------A-RP--------------------------------GSPPGGGGWVIYFAVDDIDATLERV----VAAGG   94 (127)
T ss_pred             ----------c-CC--------------------------------cCCCCCCCEEEEEecCChHHHHHHH----HhcCC
Confidence                      0 00                                0001122334668899999999999    79999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +|..++.++|++ ++.+.|.||+||.|-|.+.
T Consensus        95 ~V~~p~~~~p~~-G~~a~~~Dp~Gn~~~l~s~  125 (127)
T COG3324          95 KVLRPKTEFPGG-GRIAHFVDPEGNRFGLWSP  125 (127)
T ss_pred             eEEecccccCCc-eEEEEEECCCCCEEEEeec
Confidence            999999999864 4889999999999999875

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.26  E-value=2e-10  Score=96.87  Aligned_cols=123  Identities=19%  Similarity=0.207  Sum_probs=83.4

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      ...+.++-+.|.|+|++++..||+++||+++..+..      +...++.+   +...|.|.......             
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vg---g~~LL~L~q~~~a~-------------   63 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVG---GTPLLTLEQFPDAR-------------   63 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeC---CEEEEEEEeCCCCC-------------
Confidence            345789999999999999999999999999988642      23344432   12333332211110             


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                                                   .+..+..|+-|+||.+++-.++.+.| .++.+.|+
T Consensus        64 ---------------------------------------------~~~~~~aGLyH~AfLlP~r~~L~~~l-~hl~~~~~   97 (265)
T COG2514          64 ---------------------------------------------RPPPRAAGLYHTAFLLPTREDLARVL-NHLAEEGI   97 (265)
T ss_pred             ---------------------------------------------CCCccccceeeeeeecCCHHHHHHHH-HHHHhcCC
Confidence                                                         11234458999999999965555544 45578888


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++. +..+  +...-.+||.||+||-||++..+.
T Consensus        98 ~l~-Ga~D--H~vSEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          98 PLV-GASD--HLVSEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             ccc-ccCc--chhheeeeecCCCCCeEEEEecCC
Confidence            875 2222  333467999999999999998743

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.25  E-value=4e-11  Score=98.01  Aligned_cols=108  Identities=19%  Similarity=0.312  Sum_probs=69.1

Q ss_pred             ceeeeEEEEEC--CHHHHHHHHHHhcCCEEEEeecCCC--CceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           22 RRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPE--EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        22 ~~l~Hi~l~V~--Dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      .+++|+++.|+  |++++++||+++|||+...+...++  .......+..  ......++|..+.....  .+       
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~--~~g~i~l~L~~~~~~~~--~s-------   70 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLAS--PDGKIRIPLNEPASGKR--KS-------   70 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEEC--CCCcEEEEEecCCCCCC--cc-------
Confidence            57999999999  9999999999999999887654322  1222223322  11223333321110000  00       


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcC
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELG  177 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G  177 (220)
                                                        ..       ..-...+.+.|++||||.|+|+++++++|    +++|
T Consensus        71 ----------------------------------~~-------~~fl~~~~G~Gv~HIAf~vdDI~~~~~~L----~~~G  105 (191)
T cd07250          71 ----------------------------------QI-------QEFLEYYGGAGVQHIALATDDIFATVAAL----RARG  105 (191)
T ss_pred             ----------------------------------HH-------HHHHHHhCCCceeEEEEECCCHHHHHHHH----HHcC
Confidence                                              00       00001334679999999999999999999    7999


Q ss_pred             CeeecCCc
Q 027676          178 GKITRQPG  185 (220)
Q Consensus       178 ~~i~~~p~  185 (220)
                      +++...|.
T Consensus       106 v~~l~~P~  113 (191)
T cd07250         106 VEFLPIPD  113 (191)
T ss_pred             CeeccCch
Confidence            99988774

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.23  E-value=7.9e-11  Score=88.31  Aligned_cols=55  Identities=22%  Similarity=0.198  Sum_probs=42.3

Q ss_pred             eeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          153 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       153 ~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .-|||.+.+ .+.++.+.++..++|++...++..  .+..+...|+|||||.||++.-
T Consensus        73 vli~ls~~s-~eevd~~v~ka~eaGGk~~~~~~d--~gfMYg~~fqDpDGh~wE~l~m  127 (133)
T COG3607          73 VLISLSAGS-REEVDELVDKALEAGGKPANEPQD--EGFMYGRSFQDPDGHVWEFLWM  127 (133)
T ss_pred             EEEEeccCc-HHHHHHHHHHHHHcCCCCCCCccc--cccccceeeeCCCCCeEEEEEe
Confidence            348888887 566666666669999998776664  3445778899999999999864

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.10  E-value=7.9e-10  Score=81.54  Aligned_cols=33  Identities=30%  Similarity=0.612  Sum_probs=30.2

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeec
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD   54 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~   54 (220)
                      ++++|++|.|+|+++|++||+++||++...+..
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~   33 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTV   33 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecc
Confidence            478999999999999999999999999988754

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.03  E-value=1.1e-09  Score=97.55  Aligned_cols=108  Identities=19%  Similarity=0.314  Sum_probs=69.0

Q ss_pred             cccCcceeeeEEEEEC--CHHHHHHHHHHhcCCEEEEeecCCCC--ceeEEEeeecCCCceeEEEEEeecCCcccCCCCc
Q 027676           17 PKKDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG   92 (220)
Q Consensus        17 ~~~~~~~l~Hi~l~V~--Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~   92 (220)
                      +.+...+++|+++.|+  |++++++||+++|||+...+.+.+..  .+....+..  ..+...++|..+....       
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~--~~g~~~i~L~ep~~~~-------  222 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMAS--PDGKVKIPLNEPASGK-------  222 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEEC--CCCcEEEEEeccCCCC-------
Confidence            3455688999999999  99999999999999998876442211  111011110  0112223332100000       


Q ss_pred             eeEEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCC-c---ccccCCceeeEEEEeCCHHHHHHH
Q 027676           93 FGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-T---EYTKGNAYAQVAISTDDVYKSAEV  168 (220)
Q Consensus        93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~-~---~~~~~~g~~Hiaf~v~Dv~a~~~~  168 (220)
                                                                     ...+ .   +.+.+.|++||||.|+|+++++++
T Consensus       223 -----------------------------------------------~~s~i~~fl~~~~g~Gv~HiAf~vdDi~~~~~~  255 (353)
T TIGR01263       223 -----------------------------------------------DKSQIEEFLEFYNGAGVQHIALNTDDIVRTVRA  255 (353)
T ss_pred             -----------------------------------------------CCCHHHHHHHHcCCCCccEEEEEcCCHHHHHHH
Confidence                                                           0000 0   133467999999999999999999


Q ss_pred             HHHHHHHcCCeeecCC
Q 027676          169 VNLVTQELGGKITRQP  184 (220)
Q Consensus       169 l~~~~~~~G~~i~~~p  184 (220)
                      |    +++|+++..+|
T Consensus       256 l----~~~Gv~~l~~P  267 (353)
T TIGR01263       256 L----RARGVEFLDTP  267 (353)
T ss_pred             H----HHcCCccCcCC
Confidence            9    79999999877

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.97  E-value=5e-08  Score=74.23  Aligned_cols=51  Identities=14%  Similarity=0.031  Sum_probs=37.4

Q ss_pred             ceeeEEEEeCCH---HHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEE
Q 027676          151 AYAQVAISTDDV---YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  207 (220)
Q Consensus       151 g~~Hiaf~v~Dv---~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iEl  207 (220)
                      +..++++.|+|+   ++++++|    ++ |.++..++...+.+ .+.++++||+|+.|+|
T Consensus        74 ~~~~l~i~~~~~e~v~~~~~~l----~~-~g~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i  127 (128)
T cd06588          74 NGISLSVECDSEEEADRLFEAL----SE-GGTVLMPLQKTFWS-PLFGWVTDRFGVSWQI  127 (128)
T ss_pred             CCEEEEEECCCHHHHHHHHHHH----hc-CCeEeccchhcCcc-cccEEEECCCCCEEEe
Confidence            345799999984   4444554    44 55888888766543 4789999999999997

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.94  E-value=2e-08  Score=89.44  Aligned_cols=128  Identities=21%  Similarity=0.244  Sum_probs=80.7

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      ++++|+.|.|+|++++++||++.|||+...+.....+. ..+.+..    +...++|....+..+.              
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~----G~~~l~L~~~~~~~s~--------------   61 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQ----GQINFVLTAPYSSDSP--------------   61 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEe----CCEEEEEecCCCCCch--------------
Confidence            36899999999999999999999999998763222211 1122221    1233444321110000              


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                    ..+                         -....+.|+.||||.|+|++++++++    +++|+++.
T Consensus        62 --------------~~~-------------------------~~~~hg~gv~~iaf~V~Dv~~a~~~l----~~~Ga~~v   98 (353)
T TIGR01263        62 --------------AAD-------------------------FAAKHGDGVKDVAFRVDDAAAAFEAA----VERGAEPV   98 (353)
T ss_pred             --------------HHH-------------------------HHHhCCCceEEEEEEECCHHHHHHHH----HHCCCEec
Confidence                          000                         00124678999999999999999999    79999998


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .+|.....+...+.-++.+.|-.+-|+++.
T Consensus        99 ~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~  128 (353)
T TIGR01263        99 QAPVELDEGAVTLATIKGIGDVVHTLVDRG  128 (353)
T ss_pred             cCCccCCCCeEEEEEEECcCCCEEEEEcCC
Confidence            887643111224445567777777777754

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.91  E-value=1.5e-08  Score=75.04  Aligned_cols=55  Identities=20%  Similarity=0.250  Sum_probs=42.9

Q ss_pred             EEEEeCCHHHHHHHHHHHHHHcCCeeecCCcc-cCCCC--ceEEEEECCCCCEEEEEechhh
Q 027676          155 VAISTDDVYKSAEVVNLVTQELGGKITRQPGS-IPGLN--TKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       155 iaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~-~~~~~--~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      +.|.++|.-++.++|    +++|++..-+|.- +.+..  .+.+|+.||.||-||+-..+++
T Consensus        75 vVl~~edW~alaerl----ea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~~  132 (138)
T COG3565          75 VVLPVEDWFALAERL----EAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRDQ  132 (138)
T ss_pred             EEEEHHHHHHHHHHH----HHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccch
Confidence            557888988999988    7899998888753 33322  2779999999999999877665

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.75  E-value=7.4e-08  Score=84.57  Aligned_cols=51  Identities=16%  Similarity=0.113  Sum_probs=39.9

Q ss_pred             EEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          155 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       155 iaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +|+++++ .+.++.+.+++.++|++...++..  .+ . .--|.|||||.||++..
T Consensus       304 l~Ls~~S-re~VD~lv~~A~aaGG~~~~~~~D--~G-f-~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        304 LSLELEC-EHDFVRFLRRWEMLGGELGEQADG--HF-P-LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             EEeccCC-HHHHHHHHHHHHHcCCCCCCCccc--cc-C-cceeECCCCCEEEEEEE
Confidence            8899998 677888888889999976555544  22 2 56789999999999864

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.74  E-value=3.9e-08  Score=88.56  Aligned_cols=36  Identities=22%  Similarity=0.239  Sum_probs=31.8

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeec
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD   54 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~   54 (220)
                      ..+.+++|+++.|++++.++.||+++|||+.....+
T Consensus       176 ~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d  211 (398)
T PLN02875        176 YGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFT  211 (398)
T ss_pred             CCcceeCcceechhhHHHHHHHHHHhcCCeeeeeec
Confidence            346799999999999999999999999999876544

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.74  E-value=9.6e-07  Score=68.29  Aligned_cols=126  Identities=16%  Similarity=0.172  Sum_probs=79.4

Q ss_pred             EEEEEC-CHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCcccc
Q 027676           27 AVYRVG-DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALG  105 (220)
Q Consensus        27 i~l~V~-Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~~g  105 (220)
                      .-|.++ |-+++++||+++||.++..+...++.            ....           ....+....|..+.+.+   
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~------------~~~~-----------~~~~~~~i~HA~l~i~g---   57 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDM------------PSSA-----------GEPPGGRIMHAELRIGG---   57 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCcc------------Cccc-----------cccccCceEEEEEEECC---
Confidence            357788 99999999999999999877654331            0000           11233456677777653   


Q ss_pred             ceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCccccc-CCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCC
Q 027676          106 MKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK-GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  184 (220)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~-~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p  184 (220)
                      ..+.-....+.                           .+.+. ++-..-|-+.++|+++.++++    .+.|+++..++
T Consensus        58 ~~im~sd~~~~---------------------------~~~~~~~~~s~~l~~~~~d~da~f~~a----~~aGa~v~mpl  106 (136)
T COG2764          58 STIMLSDAFPD---------------------------MGATEGGGTSLSLDLYVEDVDAVFERA----AAAGATVVMPL  106 (136)
T ss_pred             EEEEEecCCCc---------------------------cCcccCCCeeEEEEEEehHHHHHHHHH----HhcCCeEEecc
Confidence            11111111110                           00111 111222556777777777777    78999999998


Q ss_pred             cccCCCCceEEEEECCCCCEEEEEec
Q 027676          185 GSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       185 ~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ..... +.+...++||.|+.|-|-..
T Consensus       107 ~~~fw-G~r~G~v~D~fGv~W~l~~~  131 (136)
T COG2764         107 EDTFW-GDRYGQVTDPFGVVWMLNTP  131 (136)
T ss_pred             hhcCc-ccceEEEECCCCCEEEEecC
Confidence            87655 45889999999999998765

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.35  E-value=3.1e-05  Score=58.05  Aligned_cols=116  Identities=22%  Similarity=0.301  Sum_probs=63.6

Q ss_pred             eeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCccc
Q 027676           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDAL  104 (220)
Q Consensus        25 ~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~~  104 (220)
                      -+..|+|.|-+..++||++.|||++..+..      ..++++..  ...-.+.|-.+++..+....              
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~--~~~erlvlEESP~~rtr~V~--------------   59 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQ--QKEERLVLEESPSMRTRAVE--------------   59 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-T--T--EEEEEEE--TTT-B--S--------------
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCC--CCceEEEEecCCcccccccc--------------
Confidence            467899999999999999999999998752      46666643  23333444333333221100              


Q ss_pred             cceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCC
Q 027676          105 GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  184 (220)
Q Consensus       105 g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p  184 (220)
                                                                 ..-=+.+|.+.|++..+..+-|     +.|.++.   
T Consensus        60 -------------------------------------------G~KKl~~ivIkv~~~~EIe~LL-----ar~~~~~---   88 (125)
T PF14506_consen   60 -------------------------------------------GPKKLNRIVIKVPNPKEIEALL-----ARGAQYD---   88 (125)
T ss_dssp             -------------------------------------------SS-SEEEEEEEESSHHHHHHHH-----HC-S--S---
T ss_pred             -------------------------------------------CcceeeEEEEEcCCHHHHHHHH-----hcccccc---
Confidence                                                       0013557889999965544444     6776642   


Q ss_pred             cccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          185 GSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       185 ~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      .-..+.+++.+-..+|+|..+.+....+.
T Consensus        89 ~l~kg~~gyAfe~vSPEgd~~llhaEdd~  117 (125)
T PF14506_consen   89 RLYKGKNGYAFEAVSPEGDRFLLHAEDDI  117 (125)
T ss_dssp             EEEE-SSSEEEEEE-TT--EEEEE--S-G
T ss_pred             eeEEcCCceEEEEECCCCCEEEEEEcCCH
Confidence            22224455778889999999999987655

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.21  E-value=3.7e-06  Score=72.59  Aligned_cols=63  Identities=16%  Similarity=0.188  Sum_probs=48.9

Q ss_pred             ccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccC--CCCceEEEEECCCCCEEEEEechhh
Q 027676          147 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       147 ~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      ..|.|..-+||.|+|++++.+.+    .++|+++..+|....  .+..+++-++-+.-....++++..+
T Consensus        87 ~HgdgvkdvafeVeD~da~~~~~----va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y  151 (381)
T KOG0638|consen   87 KHGDGVKDVAFEVEDADAIFQEA----VANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGY  151 (381)
T ss_pred             hcccchhceEEEecchHHHHHHH----HHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccc
Confidence            34567888999999999999999    799999999987643  2345778888777666677766544

>PRK10148 hypothetical protein; Provisional

Probab=98.12  E-value=0.00027  Score=55.38  Aligned_cols=56  Identities=14%  Similarity=-0.081  Sum_probs=42.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      -.++++.++|++++ +++.++ .+.|+++..++...+.+ .+...++||.|+.|.|...
T Consensus        86 ~~~l~l~~~d~ee~-~~~~~a-La~gg~v~mpl~~~~wg-~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         86 GFTLVLDTQDVEEG-KRWFDN-LAANGKIEMAWQETFWA-HGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             eEEEEEECCCHHHH-HHHHHH-hhCCCEEEecchhcchh-hccEEEECCCCCEEEEEec
Confidence            45788898897663 333333 36999999998876554 4789999999999999775

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.10  E-value=7.2e-06  Score=71.84  Aligned_cols=34  Identities=29%  Similarity=0.559  Sum_probs=30.9

Q ss_pred             cCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCc
Q 027676          148 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  185 (220)
Q Consensus       148 ~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~  185 (220)
                      .|.|++||||.++||-++++++    ++.|++++..|.
T Consensus       242 ~G~GIQHIA~~T~dI~~tv~~l----r~rG~~fl~ip~  275 (363)
T COG3185         242 RGEGIQHIAFGTDDIYATVAAL----RERGVKFLPIPE  275 (363)
T ss_pred             CCCcceEEEecccHHHHHHHHH----HHcCCccCCCch
Confidence            4669999999999999999999    799999998775

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.02  E-value=4.7e-05  Score=64.62  Aligned_cols=45  Identities=27%  Similarity=0.507  Sum_probs=37.3

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecC
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGP   69 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~   69 (220)
                      +....++||.|.|.|++++.+||+++|||+.+.+.  +    ...|+..|.
T Consensus       164 p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~--~----~A~F~a~G~  208 (265)
T COG2514         164 PAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARG--P----SALFLASGD  208 (265)
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecC--C----cceEEecCC
Confidence            45689999999999999999999999999998872  2    356676654

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.97  E-value=7.3e-05  Score=59.90  Aligned_cols=130  Identities=20%  Similarity=0.248  Sum_probs=59.4

Q ss_pred             eeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccC-CCCceeEEEEEeCc
Q 027676           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYD-IGTGFGHFAIATED  102 (220)
Q Consensus        24 l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~-~g~~~~~~~~~~~~  102 (220)
                      ++|+.+.|+|++++.++|++.|||++.....-+..+.....+.++   +. -|||....+..... .++           
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~---~~-YlEli~i~~~~~~~~~~~-----------   65 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG---DG-YLELIAIDPEAPAPDRGR-----------   65 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S---SS-EEEEEEES-HHHSTGGGT-----------
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC---Cc-eEEEEEeCCccccccccc-----------
Confidence            689999999999999999889999998776555433333333332   12 45554321100000 000           


Q ss_pred             cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeec
Q 027676          103 ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR  182 (220)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~  182 (220)
                                      +    +                 .......+.|+.++||+++|+++..+++    ++.|+....
T Consensus        66 ----------------~----~-----------------~~~~~~~~~g~~~~~l~t~d~~~~~~~l----~~~G~~~~~  104 (175)
T PF13468_consen   66 ----------------W----F-----------------GLDRLAGGEGLYGWALRTDDIEAVAARL----RAAGLDAGS  104 (175)
T ss_dssp             ---------------------T-----------------TTHHHHT--EEEEEEEE-S-HHHHHHHH----HTTT-EEEE
T ss_pred             ----------------c----e-----------------echhhcCCCCeEEEEEecCCHHHHHHHH----HhcCCCCCC
Confidence                            0    0                 0000124568999999999999999999    688876221


Q ss_pred             CCcccCCCC--ceEEEEECC----CCCEEEEEec
Q 027676          183 QPGSIPGLN--TKITSFVDP----DGWKTVLVDN  210 (220)
Q Consensus       183 ~p~~~~~~~--~~~~~~~DP----dG~~iElv~~  210 (220)
                      .. ..++..  -+.+++.|+    .+..-++++.
T Consensus       105 r~-~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~  137 (175)
T PF13468_consen  105 RV-RPDGGDLRWRLAFPEDGALPFGGLLPFFIQW  137 (175)
T ss_dssp             EE-EEEE-EEEEEEEEEE-SS---SS---EEEEE
T ss_pred             cC-cCCCCcceEEEEEeCCcccccCCCCcEEEEe
Confidence            11 111211  145666664    2456666643

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=97.77  E-value=0.0012  Score=59.90  Aligned_cols=61  Identities=13%  Similarity=0.072  Sum_probs=48.9

Q ss_pred             cCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCC----CCceEEEEECCCCCEEEEEechh
Q 027676          148 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG----LNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       148 ~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~----~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      .|.|..=|||+|+|+++++++.    .++|++...+|.....    +...+.-+..++|..+-||++..
T Consensus        89 HG~gV~dvaf~V~Da~~a~~~A----~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~  153 (398)
T PLN02875         89 HGLAVRAVGVLVEDAEEAFRTS----VAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKG  153 (398)
T ss_pred             cCCeeeEEEEEECCHHHHHHHH----HHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCC
Confidence            4678899999999999999999    7999999888765422    12356667899999999998754

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.19  E-value=0.00058  Score=59.27  Aligned_cols=147  Identities=16%  Similarity=0.303  Sum_probs=88.6

Q ss_pred             cccceee-ccccCcceeeeEEEEEC--CHHHHHHHHHHhcCCEEEEeecCCCCcee-----EEEeeecCCCceeEEEEEe
Q 027676            9 ANAELLE-WPKKDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEEKYS-----NAFLGFGPEQSHFVVELTY   80 (220)
Q Consensus         9 ~~~~~~~-~~~~~~~~l~Hi~l~V~--Dle~s~~FY~~vLG~~~~~~~~~~~~~~~-----~~~l~~g~~~~~~~lel~~   80 (220)
                      .++.++. +++....+++|+...++  .++.++.||.++|||......+++.-+.+     ...+.  + .. .++.+.-
T Consensus       163 ~~~~~fp~l~~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vla--n-~~-esi~mpi  238 (381)
T KOG0638|consen  163 SSDALFPKLPKGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLA--N-YE-ESIKMPI  238 (381)
T ss_pred             ccccccCCCCccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHh--c-CC-ccEEEec
Confidence            3445555 88889999999999999  78899999999999987665432221000     00000  0 00 0111111


Q ss_pred             ecCCcccCCCCceeEEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC
Q 027676           81 NYGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  160 (220)
Q Consensus        81 ~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~  160 (220)
                      +.+.+..+                                          ...+++-.     -.++.|.|++|||+.++
T Consensus       239 nEp~~G~k------------------------------------------~ksQIqey-----v~y~gG~GvQHiaL~te  271 (381)
T KOG0638|consen  239 NEPAPGKK------------------------------------------KKSQIQEY-----VEYHGGAGVQHIALNTE  271 (381)
T ss_pred             cCCCCCCc------------------------------------------cHHHHHHH-----HHhcCCCceeeeeecch
Confidence            11110000                                          00000000     02667889999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCeeecCCccc--------C-------CCC-----ceEEEEECCCCCEEEEEec
Q 027676          161 DVYKSAEVVNLVTQELGGKITRQPGSI--------P-------GLN-----TKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       161 Dv~a~~~~l~~~~~~~G~~i~~~p~~~--------~-------~~~-----~~~~~~~DPdG~~iElv~~  210 (220)
                      ||=.+++.+    ++.|+++.++|...        .       ...     ..+..=.|-.|+.++++..
T Consensus       272 dIi~Ai~~l----r~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gyLLQIFTK  337 (381)
T KOG0638|consen  272 DIIEAIRGL----RARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGYLLQIFTK  337 (381)
T ss_pred             HHHHHHHHH----HhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEEeeeecc
Confidence            999999999    78999999888531        0       000     1333447889999999863

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=96.88  E-value=0.012  Score=45.74  Aligned_cols=60  Identities=22%  Similarity=0.268  Sum_probs=42.1

Q ss_pred             cCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          148 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       148 ~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      .|.+..-|+|+|+|.++++++.    .+.|.+...+|... + -..+.-++.+.|-++-||++.+-
T Consensus        70 HG~sv~aiafrV~Da~~A~~rA----~~~GA~~~~~~~~~-~-e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   70 HGPSVCAIAFRVDDAAAAYERA----VALGAEPVQEPTGP-G-ELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             HSSEEEEEEEEES-HHHHHHHH----HHTT--EEEEEEET-T--BEEEEEE-CCC-EEEEEE--SS
T ss_pred             cCCEEEEEEEEeCCHHHHHHHH----HHcCCcCcccCCCC-C-cEeeeeEEccCCCEEEEEecCCC
Confidence            4678888999999999999999    79999887766431 2 23678889999999999998543

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.66  E-value=0.17  Score=37.84  Aligned_cols=44  Identities=18%  Similarity=0.021  Sum_probs=29.8

Q ss_pred             eeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEE
Q 027676          153 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  208 (220)
Q Consensus       153 ~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  208 (220)
                      ..|++.++|. +.++++..+|.+.|-         +.+  ....+.|-.|..|.|+
T Consensus        73 ~sl~i~~~~~-ee~~~~f~~Ls~gG~---------~~~--~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   73 ISLCIECDDE-EEIDRIFDKLSEGGQ---------WFS--RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EEEEEEESSH-HHHHHHHHHHHTTTE---------TCC--EEEEEE-TTS-EEEEE
T ss_pred             EEEEEEcCCH-HHHHHHHHHHHcCCC---------ccc--eeEEEEeCCCCEEEeC
Confidence            5689999994 555666566555554         222  7789999999999986

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=96.56  E-value=0.0042  Score=45.55  Aligned_cols=56  Identities=18%  Similarity=0.108  Sum_probs=41.0

Q ss_pred             eeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCC-CEEEEEechh
Q 027676          153 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG-WKTVLVDNED  212 (220)
Q Consensus       153 ~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG-~~iElv~~~~  212 (220)
                      +||+|.|+|++++++.+.   ...|+...... ..+....+..++..++| ..|||+++.+
T Consensus         1 dHv~i~V~Dl~~a~~~~~---~~lG~~~~~~~-~~~~~~v~~~~~~~~~~~~~iELi~p~~   57 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYC---DVLGFEPWERY-RDEPQGVRVAFLYLGDGPVQIELIQPLD   57 (109)
T ss_dssp             EEEEEEES-HHHHHHHHH---HCTTHEEEEEE-EEGCTTEEEEEEEETTETEEEEEEEESS
T ss_pred             CEEEEEcCCHHHHHHHHH---HhhCCcEEEEE-ecCCCCEEEEEEEeCCCcEEEEEEEeCC
Confidence            599999999999999995   34898754332 22233446788888888 6899999754

>PF15067 FAM124: FAM124 family

Probab=96.36  E-value=0.064  Score=44.88  Aligned_cols=32  Identities=9%  Similarity=0.295  Sum_probs=27.7

Q ss_pred             ceeeeEEEEEC--CHHHHHHHHHHhcCCEEEEee
Q 027676           22 RRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKR   53 (220)
Q Consensus        22 ~~l~Hi~l~V~--Dle~s~~FY~~vLG~~~~~~~   53 (220)
                      ..+..+.|+|+  |.+.+++||+-+|+-+...+.
T Consensus       127 ~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k  160 (236)
T PF15067_consen  127 KEILRFTLYCSFDNYEDMVRFYELILQREPTQQK  160 (236)
T ss_pred             ccEEEEEEEecCCCHHHHHHHHHHHhccCcceee
Confidence            46778899998  999999999999999886653

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.08  E-value=0.11  Score=39.61  Aligned_cols=25  Identities=36%  Similarity=0.486  Sum_probs=19.7

Q ss_pred             ceeEEEEEeCc----------cccceEEEeecCCC
Q 027676           92 GFGHFAIATED----------ALGMKLLRTVDKPE  116 (220)
Q Consensus        92 ~~~~~~~~~~~----------~~g~~~~~~~~~~~  116 (220)
                      .+.|++++|.|          ++||++.+..+.++
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~   36 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEE   36 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCcc
Confidence            46799999998          68999887766654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.88  E-value=0.17  Score=38.27  Aligned_cols=57  Identities=21%  Similarity=0.295  Sum_probs=39.4

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcc----------cCCCCceEEEEECCCC-CEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS----------IPGLNTKITSFVDPDG-WKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~----------~~~~~~~~~~~~DPdG-~~iElv~~~  211 (220)
                      +++||++.|.|++++.+...    +.|.++......          .++...+.+++..|+| ..||+++..
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~----~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~   70 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFL----ELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFH   70 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHH----HcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEec
Confidence            57899999999999999994    589887544311          0111235567777665 589999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=94.71  E-value=0.16  Score=39.91  Aligned_cols=59  Identities=19%  Similarity=0.224  Sum_probs=41.6

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcc-------c----------CCCCceEEEEECCCCCEEEEEechh
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS-------I----------PGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~-------~----------~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++.|+++.|.|++++.+...   +..|.++..++..       .          +....+.+++..++|..||+++..+
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~---~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~   79 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYT---EVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKN   79 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHH---HhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccC
Confidence            68899999999999999995   4589877532110       0          0111356777777888899998753

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PLN02367 lactoylglutathione lyase

Probab=94.48  E-value=0.23  Score=41.87  Aligned_cols=43  Identities=33%  Similarity=0.558  Sum_probs=36.8

Q ss_pred             ccCCCCceeEEEEEeCc----------cccceEEEeecCCCCceEEEEeeccC
Q 027676           86 SYDIGTGFGHFAIATED----------ALGMKLLRTVDKPEYKYTLAMLGYAE  128 (220)
Q Consensus        86 ~~~~g~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~l~~~~  128 (220)
                      ....|-.++|.+++|.|          ++||++....+.++.+|.++||++++
T Consensus        69 ~~t~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~  121 (233)
T PLN02367         69 EATKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYED  121 (233)
T ss_pred             CCCCCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCC
Confidence            34466788999999999          58999999999999999999998754

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=94.23  E-value=0.22  Score=36.14  Aligned_cols=59  Identities=17%  Similarity=0.170  Sum_probs=38.9

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECC---CCCEEEEEechh
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDP---DGWKTVLVDNED  212 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DP---dG~~iElv~~~~  212 (220)
                      |+.|+++.|+|++++.+...   +-.|+++...............++.+.   .|..|+|++...
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~---~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   62 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYT---DVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPD   62 (126)
T ss_pred             CcccEEEEcCChhHhHHHHH---HccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCC
Confidence            47899999999999999985   467988764432111111234555554   677888887643

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.31  E-value=0.55  Score=33.86  Aligned_cols=57  Identities=25%  Similarity=0.209  Sum_probs=38.5

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +++||++.|.|++++.+.+.   +..|.++...... +......+.+..+++..||++...
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~---~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~i~l~~~~   59 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYV---EILGFKVIREVYR-PERGSYKLDLLLNGGYQLELFSFP   59 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHH---HhcCCEEeeeeec-CCCCcEEEEEecCCCcEEEEEEcC
Confidence            67899999999999999995   4689987654321 111122234455677788887644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=92.87  E-value=0.24  Score=39.20  Aligned_cols=86  Identities=27%  Similarity=0.331  Sum_probs=62.2

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccC---------CCCc
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYD---------IGTG   92 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~---------~g~~   92 (220)
                      .++.|..|.+++..+...||...||++.......+...-. +|+..    ....+||.++||..+..         .+++
T Consensus        41 tr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~-v~~~~----~~~~~ELthn~Gtes~~~~~~~ngN~~prG  115 (170)
T KOG2944|consen   41 TRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS-VFVFS----RNAKLELTHNWGTESPPDQAYLNGNKEPRG  115 (170)
T ss_pred             hhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc-eEEec----ccCceeeecCCCCCCCcchhhcCCCCCCCc
Confidence            4899999999999999999999999986554333322222 44432    34579999999976544         2368


Q ss_pred             eeEEEEEeCcc---------ccceEEEee
Q 027676           93 FGHFAIATEDA---------LGMKLLRTV  112 (220)
Q Consensus        93 ~~~~~~~~~~~---------~g~~~~~~~  112 (220)
                      +.||||.|+|+         .|++..+..
T Consensus       116 fgHIci~V~di~sac~~lkekGV~f~Kk~  144 (170)
T KOG2944|consen  116 FGHICIEVDDINSACERLKEKGVRFKKKL  144 (170)
T ss_pred             cceEEEEeCCHHHHHHHHHHhCceeeecC
Confidence            99999999995         477744443

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=92.36  E-value=0.63  Score=33.84  Aligned_cols=56  Identities=11%  Similarity=0.095  Sum_probs=37.8

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +.||+|.|.|++++.+.+.   +-.|.+........++...+.+++.. +|..+++++..
T Consensus         1 ~~hv~l~v~d~~~~~~fy~---~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   56 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYR---DVLGVGPWEEEEVPPEQGVRVAFLGL-GNVQIELIEPL   56 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHH---HhhCCCCccccccCcccccEEEEEEc-CCEEEEEEEEC
Confidence            3699999999999999985   45888775433221122234556654 67888988753

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=91.72  E-value=0.79  Score=33.03  Aligned_cols=56  Identities=20%  Similarity=0.253  Sum_probs=38.4

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCc-ccCCCCceEEEEECCCCCEEEEEec
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG-SIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~-~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +++||++.|.|++++.+...   .-.|.++..... ..+.......++...+. .++++..
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~---~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~   57 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYT---DVLGFRLVEESDNDGEGGDLRIAFLRIGEG-HIELFLN   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HTTTSEEEEEEEEESTTEEEEEEEEESTSS-CEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHH---HHhCCcEEeeeccccccccccceeeccccc-ceeeeee
Confidence            47899999999999999997   679998887655 22222224455555554 4666654

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=91.45  E-value=0.36  Score=38.34  Aligned_cols=56  Identities=25%  Similarity=0.290  Sum_probs=30.5

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++||.+.|+|++++.+.+.   +..|+++... +..++.+.....+.=++| -|||+...+
T Consensus         1 lDH~v~~v~dl~~a~~~~~---~~lGf~~~~g-g~h~~~GT~N~li~f~~~-YlEli~i~~   56 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFE---QRLGFTVTPG-GEHPGWGTANALIPFGDG-YLELIAIDP   56 (175)
T ss_dssp             EEEEEEE-TTGGG----GG---GS--S--EEE-EE-TTT-EEEEEEE-SSS-EEEEEEES-
T ss_pred             CCEEEEEcCCHHHHHHhhh---hcceEeecCC-CcCCCCccEEEEEeeCCc-eEEEEEeCC
Confidence            4799999999999999995   4789988744 334443444444433777 999998643

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=90.96  E-value=1.5  Score=35.57  Aligned_cols=61  Identities=20%  Similarity=0.190  Sum_probs=41.6

Q ss_pred             cccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEE--C----------------CCCCEEEE
Q 027676          146 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV--D----------------PDGWKTVL  207 (220)
Q Consensus       146 ~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~--D----------------PdG~~iEl  207 (220)
                      .+.+-.+.|++|.|.|++++++...   +..|.++..... .+....+.+|+-  +                ..+..|||
T Consensus        22 ~~~~~~~~Ht~i~V~Dle~Si~FY~---~vLG~~~~~r~~-~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL   97 (185)
T PLN03042         22 ATKGYIMQQTMFRIKDPKASLDFYS---RVLGMSLLKRLD-FPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIEL   97 (185)
T ss_pred             CCCCcEEEEEEEeeCCHHHHHHHHH---hhcCCEEEEEEE-cCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEE
Confidence            4456689999999999999999886   578998865542 223223434432  1                13568999


Q ss_pred             Eec
Q 027676          208 VDN  210 (220)
Q Consensus       208 v~~  210 (220)
                      ++.
T Consensus        98 ~~~  100 (185)
T PLN03042         98 THN  100 (185)
T ss_pred             EEc
Confidence            975

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=90.15  E-value=8.3  Score=34.45  Aligned_cols=39  Identities=18%  Similarity=0.237  Sum_probs=28.5

Q ss_pred             ceeeccccCcceeeeEEEEECCH-HHHHHHHHHhcCCEEEEe
Q 027676           12 ELLEWPKKDKRRFLHAVYRVGDL-DRTIKFYTECFGMKLLRK   52 (220)
Q Consensus        12 ~~~~~~~~~~~~l~Hi~l~V~Dl-e~s~~FY~~vLG~~~~~~   52 (220)
                      ..+.+|.. -..+.++.++|+|. ++...++ .-|||+...+
T Consensus        12 ~~~~~P~~-~~GfeFvEf~~~d~~~~l~~l~-~~lGF~~~~~   51 (363)
T COG3185          12 DTLANPEG-TDGFEFVEFAVPDPQEALGALL-GQLGFTAVAK   51 (363)
T ss_pred             ccccCCCC-CCceeEEEEecCCHHHHHHHHH-HHhCcccccc
Confidence            33445544 68999999999999 5555555 6799988764

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.37  E-value=2.1  Score=30.86  Aligned_cols=57  Identities=19%  Similarity=0.151  Sum_probs=36.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +.|+++.|+|++++.+...   +-.|.++...... +.......|+.-.+|..|++++..+
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~---~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~   58 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYV---TYFGATSNEKYHN-PRKGFESYFLSFDDGARLELMTRPD   58 (125)
T ss_pred             ceEEEEEecCHHHHHHHHH---HHhCCEeeceEeC-CCCCceEEEEecCCCcEEEEEcCcc
Confidence            4699999999999999885   4578876422111 1111233455444678899987543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.30  E-value=1.6  Score=31.98  Aligned_cols=55  Identities=15%  Similarity=0.096  Sum_probs=33.5

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      |++|+++.|.|++++.+.+.+.+-..|.++.....   .   ...|+...++..|++.+..
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~---~---~~~~~~~~~~~~i~l~~~~   55 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE---D---GRSWRAGDGGTYLVLQQAD   55 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec---c---CceEEecCCceEEEEEecc
Confidence            47899999999999999885322222988765431   1   1123322445566666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=89.03  E-value=2.1  Score=31.30  Aligned_cols=30  Identities=20%  Similarity=0.159  Sum_probs=25.0

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      ++.|+++.|+|++++++...   +..|.++...
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~---~~LG~~~~~~   35 (129)
T PRK11478          6 QVHHIAIIATDYAVSKAFYC---DILGFTLQSE   35 (129)
T ss_pred             eecEEEEEcCCHHHHHHHHH---HHhCCEeccc
Confidence            57899999999999999885   4689887543

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.03  E-value=1.4  Score=30.76  Aligned_cols=55  Identities=18%  Similarity=0.121  Sum_probs=37.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      ++|+++.|+|++++.+...   .-.|.+....+.. +   ....++..+++..+++....+.
T Consensus         1 i~Hi~l~v~d~~~~~~FY~---~~lG~~~~~~~~~-~---~~~~~~~~~~~~~i~l~~~~~~   55 (114)
T cd07245           1 LDHVALRVPDLEASRAFYT---DVLGLEEGPRPPF-L---FPGAWLYAGDGPQLHLIEEDPP   55 (114)
T ss_pred             CCeEEEecCCHHHHHHHHH---HccCCcccCcCCC-C---CCceEEEeCCCcEEEEEecCCC
Confidence            4699999999999999886   5778876544321 1   1234555555567888876554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=88.33  E-value=2.3  Score=33.21  Aligned_cols=51  Identities=14%  Similarity=0.167  Sum_probs=35.1

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEEC--CCCCEEEEEec
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVD--PDGWKTVLVDN  210 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~D--PdG~~iElv~~  210 (220)
                      |++||++.|.|++++.+...   +-.|.++.....   +   ...++..  .++..|++++.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~---~~LG~~~~~~~~---~---~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLT---DVLGFREVGEEG---D---RVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHH---HhcCCEEEeeeC---C---EEEEEecCCCCCCEEEEEeC
Confidence            57899999999999999885   357988754321   1   2233332  35788888775

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=88.08  E-value=2.1  Score=30.74  Aligned_cols=55  Identities=22%  Similarity=0.220  Sum_probs=36.5

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCC---CCEEEEEec
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD---GWKTVLVDN  210 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPd---G~~iElv~~  210 (220)
                      +.|+++.|.|++++.+...   .-.|.++...+.. ++.....+++..++   +..|+++..
T Consensus         1 ~~hv~i~v~d~~~a~~fY~---~~lG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~l~~~   58 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYT---DVLGMKLLRRKDF-PEGKFTLVFLGYPDEDSEGVLELTYN   58 (121)
T ss_pred             CeeEEEEecCcHHHHHHHH---hccCCeEEEEEec-CCCceEEEEecCCCCCCccEEEEEec
Confidence            4699999999999999995   4569887654321 12122345555444   578888764

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=86.80  E-value=2.4  Score=34.34  Aligned_cols=59  Identities=14%  Similarity=0.092  Sum_probs=41.5

Q ss_pred             ceeeEEEEeC--CHHHHHHHHHHHHHHcCCeeecCCc-ccCCCCceEEEEECCCC-CEEEEEechh
Q 027676          151 AYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPG-SIPGLNTKITSFVDPDG-WKTVLVDNED  212 (220)
Q Consensus       151 g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~~i~~~p~-~~~~~~~~~~~~~DPdG-~~iElv~~~~  212 (220)
                      +++||++.|+  |++++++...   ...|.+...... ..+..+.+..++..|+| ..|+|.++.+
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~---~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~   65 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYR---KVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPAS   65 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHH---HhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCC
Confidence            5789999999  9999999885   468987654322 11223346677788865 5688887654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=85.22  E-value=5.1  Score=30.01  Aligned_cols=56  Identities=13%  Similarity=0.019  Sum_probs=40.8

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEee
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN   81 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~   81 (220)
                      ..+.|+++.|.|++++.+-.++ .|.+++.+.....+..+.+++..   +++..+++...
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~d---p~G~~ie~~~~  123 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKG---YGDSLHTLVDR  123 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEec---cCCcEEEEEec
Confidence            4688999999999999888865 79999866544334456777653   45667777653

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=84.80  E-value=3.6  Score=28.14  Aligned_cols=53  Identities=13%  Similarity=0.193  Sum_probs=38.0

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          154 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       154 Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      |+++.|.|++++.+.+.   ...|.++......   .....+++.++ +..|+|.+..+.
T Consensus         1 Hi~i~~~d~~~~~~fy~---~~lg~~~~~~~~~---~~~~~~~~~~~-~~~i~l~~~~~~   53 (112)
T cd06587           1 HVGLTVSDLEAAVAFYE---EVLGFEVLFRNGN---GGAEFAVLGLG-GTRLELFEGDEP   53 (112)
T ss_pred             CcceeeCCHHHHHHHHH---hccCCEEEEeecc---CCEEEEEEecC-CceEEEecCCCC
Confidence            78899999999999984   3489887655432   12255666665 788888887654

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=84.55  E-value=4.8  Score=29.10  Aligned_cols=29  Identities=17%  Similarity=0.268  Sum_probs=24.4

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      +.||++.|+|++++.+...   ...|.++...
T Consensus         3 i~hi~l~v~d~~~~~~Fy~---~~lG~~~~~~   31 (125)
T cd07255           3 IGAVTLRVADLERSLAFYQ---DVLGLEVLER   31 (125)
T ss_pred             EEEEEEEECCHHHHHHHHH---hccCcEEEEc
Confidence            6799999999999999985   4579888655

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=83.37  E-value=5.1  Score=28.26  Aligned_cols=55  Identities=18%  Similarity=0.186  Sum_probs=36.0

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCC--CEEEEEechhh
Q 027676          154 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG--WKTVLVDNEDF  213 (220)
Q Consensus       154 Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG--~~iElv~~~~~  213 (220)
                      |+++.|.|++++.+...   +..|.++......  .....++++.++++  ..|++.+..+.
T Consensus         1 Hv~l~v~d~~~~~~fY~---~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~   57 (119)
T cd07263           1 LVSLYVDDQDKALAFYT---EKLGFEVREDVPM--GGGFRWVTVAPPGSPETSLVLAPPANP   57 (119)
T ss_pred             CceEEeCCHHHHHHHHH---hccCeEEEEeecc--CCCcEEEEEeCCCCCeeEEEEeCCCCc
Confidence            89999999999988885   4589988754321  11224566666654  46666655443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=82.48  E-value=7.3  Score=28.99  Aligned_cols=30  Identities=7%  Similarity=0.227  Sum_probs=24.4

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      ++.|+++.|+|++++++...   .-.|.+....
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~---~~lG~~~~~~   33 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQ---NIFNAREVYS   33 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHH---HHhCCeeEEe
Confidence            68899999999999998886   4578876544

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=81.10  E-value=6.7  Score=28.34  Aligned_cols=54  Identities=19%  Similarity=0.307  Sum_probs=34.7

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +.|+++.|.|++++.+...   ...|.++..... .+.......++. +++..|+|++.
T Consensus         2 i~hv~l~v~D~~~s~~FY~---~~lG~~~~~~~~-~~~~~~~~~~~~-~~~~~i~l~~~   55 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYE---DVLGAHVSHIEE-VPEQGVKVVFIA-LGNTKVELLEP   55 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHH---HHhCCCCcccee-CCCCCcEEEEEe-cCCEEEEEEec
Confidence            5799999999999999985   467887653321 122222333433 34567888764

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=80.72  E-value=9.2  Score=28.11  Aligned_cols=29  Identities=17%  Similarity=0.226  Sum_probs=24.0

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      +.|+.+.|.|++++.+...   +-.|.++...
T Consensus         2 i~hv~l~v~D~~~s~~FY~---~~lG~~~~~~   30 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYR---DVLGFTVTDR   30 (134)
T ss_pred             eeEEEEEecCHHHHHHHHH---HhcCCEEEee
Confidence            5799999999999999885   4589887643

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=80.30  E-value=7.1  Score=28.16  Aligned_cols=26  Identities=27%  Similarity=0.322  Sum_probs=21.8

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                      +.||++.|+|++++.+..    ...|.++.
T Consensus         1 ~~~i~l~V~D~~~a~~FY----~~LGf~~~   26 (122)
T cd07235           1 LDAVGIVVADMAKSLDFY----RRLGFDFP   26 (122)
T ss_pred             CceEEEEeccHHHHHHHH----HHhCceec
Confidence            468999999999999988    45898764

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	220
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		2e-26
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		8e-14
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		2e-22
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		8e-22
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		1e-14
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		9e-06
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		2e-05
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		3e-05
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		3e-05
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		3e-05

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/82 (65%), Positives = 62/82 (75%)
Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 82  YGVTSYDIGTGFGHFAIATEDA 103
           YGVTSY     +GH AI  ED 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDV 88

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 13/119 (10%)
Query: 104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY 163
           LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYGVT Y    AY  +AI  +DV 
Sbjct: 30  LGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDV- 88
Query: 164 KSAEVVNLVTQELGGKITRQ--PGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 220
                     +EL   + +   P      +  +   VDPDG+   L++ +  +++ +++
Sbjct: 89  ----------KELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNEKTMMEKAEAD 137

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 60/81 (74%)
Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61
Query: 83  GVTSYDIGTGFGHFAIATEDA 103
           GV  Y++GT +GH A++ ++A
Sbjct: 62  GVDKYELGTAYGHIALSVDNA 82

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 71/109 (65%), Gaps = 4/109 (3%)
Query: 104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY 163
           LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+  
Sbjct: 24  LGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAA 83
Query: 164 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 212
           ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct: 84  EACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 11/94 (11%)
Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPE 70
           RR LH V++VG+  +T +FY +  GMK+LR  +  E            K+S   +GFGPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 71  QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDAL 104
             HFV ELTYNYGV  Y +G  F    +A+  A+
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDFMGITLASSQAV 119

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 102 DALGMKLLR----------TVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN 150
           D LGMK+LR            + P + K++  M+G+  ED   V ELTYNYGV +Y  GN
Sbjct: 47  DVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGN 106
Query: 151 AYAQVAISTDDVYKSAEVVNLVTQELGGKI--TRQPG 185
            +  + +++     +A  +     E+   +  T  PG
Sbjct: 107 DFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAPG 143

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 37/136 (27%)
Query: 104 LGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE--- 145
           LG+ LL+ +D P  K++L  L Y +++               +   LELT+N+G  +   
Sbjct: 53  LGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDET 112
Query: 146 --YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKITSF 197
             Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F
Sbjct: 113 QSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AF 163
Query: 198 V-DPDG-WKTVLVDNE 211
           + DPDG W  +L  N+
Sbjct: 164 IQDPDGYWIEILNPNK 179

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 37/136 (27%)
Query: 104 LGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE--- 145
           LGM L++  D P  K++L  L Y +++               +   LELT+N+G  +   
Sbjct: 52  LGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDET 111
Query: 146 --YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKITSF 197
             Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F
Sbjct: 112 QSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AF 162
Query: 198 V-DPDG-WKTVLVDNE 211
           + DPDG W  +L  N+
Sbjct: 163 IQDPDGYWIQILNPNK 178

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 37/136 (27%)
Query: 104 LGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE--- 145
           LGM L++  D P  K++L  L Y +++               +   LELT+N+G  +   
Sbjct: 56  LGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDET 115
Query: 146 --YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKITSF 197
             Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F
Sbjct: 116 QSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AF 166
Query: 198 V-DPDG-WKTVLVDNE 211
           + DPDG W  +L  N+
Sbjct: 167 IQDPDGYWIEILNPNK 182

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 37/136 (27%)
Query: 104 LGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE--- 145
           LGM L++  D P  K++L  L Y +++               +   LELT+N+G  +   
Sbjct: 52  LGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDET 111
Query: 146 --YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKITSF 197
             Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F
Sbjct: 112 QSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AF 162
Query: 198 V-DPDG-WKTVLVDNE 211
           + DPDG W  +L  N+
Sbjct: 163 IQDPDGYWIEILNPNK 178

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	220
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	6e-35
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	3e-26
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	8e-34
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	4e-27
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-25
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	3e-21
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	4e-13
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	5e-21
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	2e-12
2p25_A	126	Glyoxalase family protein; structural genomics, MC	2e-18
2p25_A	126	Glyoxalase family protein; structural genomics, MC	5e-07
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	3e-18
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	9e-08
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	1e-14
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	6e-13
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	1e-09
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	5e-12
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-12
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	1e-11
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	1e-09
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	3e-11
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	7e-11
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	2e-09
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-10
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-09
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	5e-09
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	2e-08
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	3e-08
3ghj_A	141	Putative integron gene cassette protein; integron	5e-08
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-08
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	7e-08
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-07
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-07
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	3e-07
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	5e-07
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	6e-06
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	3e-06
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	4e-06
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	6e-06
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	6e-06
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	9e-06
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	4e-05
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	5e-05
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	5e-05
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	6e-05
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	1e-04
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	2e-04
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-04
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	6e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  120 bits (302), Expect = 6e-35
 Identities = 54/82 (65%), Positives = 62/82 (75%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
            RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 81  NYGVTSYDIGTGFGHFAIATED 102
           NYGVTSY     +GH AI  ED
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVED 87

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 97.9 bits (244), Expect = 3e-26
 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
            + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYGVT Y    AY  +AI  +
Sbjct: 27  TERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE 86

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 220
           DV +    +    ++    I  +  S       +   VDPDG+   L++ +  +++ +++
Sbjct: 87  DVKELVADM----RKHDVPIDYEDES-----GFMAFVVDPDGYYIELLNEKTMMEKAEAD 137

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  117 bits (294), Expect = 8e-34
 Identities = 45/81 (55%), Positives = 60/81 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDA 103
           GV  Y++GT +GH A++ ++A
Sbjct: 62  GVDKYELGTAYGHIALSVDNA 82

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 99.8 bits (249), Expect = 4e-27
 Identities = 49/117 (41%), Positives = 73/117 (62%), Gaps = 4/117 (3%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
              LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D
Sbjct: 21  TKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD 80

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEI 217
           +  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D  + +
Sbjct: 81  NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 97.4 bits (242), Expect = 1e-25
 Identities = 41/226 (18%), Positives = 73/226 (32%), Gaps = 51/226 (22%)

Query: 1   MAEASPAAA---NAELLEW-----PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRK 52
           MAE  PA++   +           P          + R+ D  +++ FYT   G+ LL+K
Sbjct: 1   MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQK 60

Query: 53  RDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMKLLRTV 112
            D P  K+S  FL +  +      +        S        H                 
Sbjct: 61  LDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTH----------------- 103

Query: 113 DKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 172
                                    +Y+ G ++      +  + I+  DVY + +     
Sbjct: 104 ---------------NWGTEDDETQSYHNGNSD---PRGFGHIGIAVPDVYSACKRF--- 142

Query: 173 TQELGGKITRQPGSIPGLNTKITSFV-DPDGWKTVLVDNEDFLKEI 217
            +ELG K  ++P        K  +F+ DPDG+   +++       I
Sbjct: 143 -EELGVKFVKKPDDGK---MKGLAFIQDPDGYWIEILNPNKIATII 184

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 85.3 bits (211), Expect = 3e-21
 Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 11/104 (10%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H    V  +   + FY     +KLL   D+P +    AFL  G  +   +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 83  GVTSY--DIGTGFGHFAIATED---------ALGMKLLRTVDKP 115
            +  +    G G  H AI  +            G++++     P
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVP 111

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 63.7 bits (155), Expect = 4e-13
 Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 19/119 (15%)

Query: 95  HFAIATED----------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 144
           H  IA             +L +KLL   D P     +A L   E     +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 145 EYTK--GNAYAQVAISTDDVYKSAEVVNLVTQELGGK-ITRQPGSIPGLNTKITSFVDP 200
           ++ +  G     +AI    + +  + V    +E G + I  +P   PG      +F+ P
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEV----KENGVQMINDEPV--PGARGAQVAFLHP 123

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 84.0 bits (208), Expect = 5e-21
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H    V DL++   FY    G ++     +PE   S  F+  G  +   +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 82  YGVTSY---DIGTGFGHFAIATED 102
             +  +   +   G  H  I  ++
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDN 87

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 61.3 bits (149), Expect = 2e-12
 Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 21/124 (16%)

Query: 95  HFAIATED----------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 144
           H AIA  D           LG ++   V  PE+  ++  +         +  L  +  + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 145 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV--- 198
            +    K      + I  D++  +   +    ++   +   +   I      +  F+   
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVI-FLHPK 122

Query: 199 DPDG 202
           D  G
Sbjct: 123 DCGG 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 77.1 bits (190), Expect = 2e-18
 Identities = 18/81 (22%), Positives = 26/81 (32%), Gaps = 1/81 (1%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H      +   T  FY E  G ++LR+   PE+      L  G ++          
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEI-FISDQF 62

Query: 82  YGVTSYDIGTGFGHFAIATED 102
               SY    G  H A   E 
Sbjct: 63  PARPSYPEALGLRHLAFKVEH 83

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 46.3 bits (110), Expect = 5e-07
 Identities = 21/122 (17%), Positives = 35/122 (28%), Gaps = 16/122 (13%)

Query: 91  TGFGHFAIAT----------EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN 140
               H AI             + LG ++LR   +PE       L      +  +      
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-SQELEIFISDQF 62

Query: 141 YGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDP 200
                Y +      +A   + + +    +     E G +             K+T F DP
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFL----NEQGIETEPLRVD-DFTGKKMTFFFDP 117

Query: 201 DG 202
           DG
Sbjct: 118 DG 119

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 76.7 bits (189), Expect = 3e-18
 Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 7/88 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF----VVE 77
           +   H    V D D++ +FY    G +++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 78  LTYNYGVTSYDI---GTGFGHFAIATED 102
             Y              G  H A   ED
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVED 91

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 48.6 bits (116), Expect = 9e-08
 Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 22/129 (17%)

Query: 91  TGFGHFAIATED----------ALGMKLLRTVDKPEYKYTLAMLGY----AEEDQTTVLE 136
               H A+   D           LG +++R   +P+       L       E     + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 137 LTYNYGVTEYTKGNAYAQ---VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTK 193
             Y       +          +A   +DV  S + +      LG ++            K
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQEL----IALGIRVEEVRYD-DYTGKK 118

Query: 194 ITSFVDPDG 202
           +  F DPDG
Sbjct: 119 MAFFFDPDG 127

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 68.0 bits (166), Expect = 1e-14
 Identities = 17/90 (18%), Positives = 24/90 (26%), Gaps = 8/90 (8%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--------KYSNAFLGFGPEQSH 73
           R+  H    V D+  +  FY    G+  L   +VP          K +N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 74  FVVELTYNYGVTSYDIGTGFGHFAIATEDA 103
           F                T   H A   +  
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQ 107

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 62.5 bits (152), Expect = 6e-13
 Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 9/85 (10%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H  Y V ++D  +K +     ++          K    F+  G  +    VEL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYR----VELVAPD 62

Query: 83  GVTS-----YDIGTGFGHFAIATED 102
           G  S        G+   H     ED
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVED 87

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 54.0 bits (130), Expect = 1e-09
 Identities = 17/124 (13%), Positives = 39/124 (31%), Gaps = 24/124 (19%)

Query: 95  HFAIATED----------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 144
           H   A ++             ++    V     K  +  +          +EL    G  
Sbjct: 10  HIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGED 65

Query: 145 E-----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV- 198
                   KG+    +    +D+ KS E +     ++G  + ++    P ++ +  +F+ 
Sbjct: 66  SPINKTIKKGSTPYHICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLF 121

Query: 199 DPDG 202
             D 
Sbjct: 122 STDI 125

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 60.0 bits (145), Expect = 5e-12
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 5/82 (6%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H      +L++  +FY   FG       +   + +++ FL F        +E+    
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFE---DGARLEIMSRT 59

Query: 83  GVTS--YDIGTGFGHFAIATED 102
            VT        G+ H AI+T  
Sbjct: 60  DVTGKTTGENLGWAHIAISTGT 81

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 60.4 bits (146), Expect = 5e-12
 Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 9/82 (10%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF----VVELTY 80
           +       D++ +  F+ +  G ++  +R  P+E++   +L                  +
Sbjct: 7   VVPELYCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKW 62

Query: 81  NYGVTSYDIGTGFGHFAIATED 102
             G   + +G+G  +F     D
Sbjct: 63  LSGDLEFPLGSGV-NFQWDVID 83

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 59.2 bits (143), Expect = 1e-11
 Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 6/111 (5%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E+ L +K +    +    Y   M G         LE T   G +     +  + +     
Sbjct: 30  EEGLCLKRIGEFSQH-NGYDGVMFGL--PHADYHLEFTQYEGGSTAPVPHPDSLLVFYVP 86

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 211
           +  + A + + + + +G +        P  +    +  DPDGW+ V ++++
Sbjct: 87  NAVELAAITSKL-KHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFMNSK 134

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 53.8 bits (129), Expect = 1e-09
 Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 3/74 (4%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
             G LD  I+FY E   +K + +       Y     G      H   E T   G ++  +
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHADYHL--EFTQYEGGSTAPV 74

Query: 90  GTGFGHFAIATEDA 103
                       +A
Sbjct: 75  PHPDSLLVFYVPNA 88

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 58.6 bits (142), Expect = 3e-11
 Identities = 15/85 (17%), Positives = 23/85 (27%), Gaps = 9/85 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVE---- 77
              +       DLD    FY + FG++++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 78  LTYNYGVTSYDIGTGFGHFAIATED 102
                         G GHF    +D
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADD 86

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 57.5 bits (139), Expect = 7e-11
 Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 12/82 (14%)

Query: 23  RFLHAVYR--VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
           + L  + R  V DL+  ++FY E     +  + ++P+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 81  NYGVTSYDIGTGFGHFAIATED 102
             G                 + 
Sbjct: 56  --GSEEALKPFRNTQATFLVDS 75

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 53.3 bits (128), Expect = 2e-09
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 16/109 (14%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E+ L   +    + P+    LA +        T+L +    G  E  K     Q     D
Sbjct: 25  EELLETPVAMRFEIPQTGVELAQIS-------TILLI---AGSEEALKPFRNTQATFLVD 74

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD 209
            + K    +    +E G +I R P  +P    +  +    DG     V+
Sbjct: 75  SLDKFKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVE 117

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 57.1 bits (137), Expect = 1e-10
 Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R       V D  +   FYT   G  +     V  +++        P+ +  ++E + + 
Sbjct: 26  RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHA 85

Query: 83  GVTSYD---IGTGFGHFAIATED 102
            VT +    +  G    + A +D
Sbjct: 86  AVTPFKEALVADGIPAASFAVDD 108

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 52.1 bits (125), Expect = 3e-09
 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 9/78 (11%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
           +     VG  +    FY E  GM+ + K +   +K    +   G ++ H  VE  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFNPA- 71

Query: 85  TSYDIGTGFGHFAIATED 102
                     H A     
Sbjct: 72  -------KRAHPAFYVLK 82

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 50.6 bits (121), Expect = 2e-08
 Identities = 22/188 (11%), Positives = 46/188 (24%), Gaps = 63/188 (33%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  +    V  LD  I F+ E  G+ L  + +V                          
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVE------------------------- 43

Query: 82  YGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY 141
                                  G    R          +AM+     D  + +EL+   
Sbjct: 44  -----------------------GEWAGRVTGLGSQCVEIAMMVT--PDGHSRIELSRFL 78

Query: 142 GVTEYTKGNA-------YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKI 194
                            Y +V  + +D+ +    +     + G ++  +       + ++
Sbjct: 79  TPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRL 133

Query: 195 TSFVDPDG 202
                 +G
Sbjct: 134 CYIRGVEG 141

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 50.2 bits (120), Expect = 3e-08
 Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 9/82 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H    V DL +++ F+ E  G+ L  + +      + A+L  G        +    
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEA-- 54

Query: 82  YGVTSYDIGTGFGHFAIATEDA 103
                    + + H+A    + 
Sbjct: 55  -RQYVPPQESDYTHYAFTVAEE 75

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 49.2 bits (118), Expect = 5e-08
 Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 12/82 (14%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +       +V +L+++ +FYTE  G +          +++  ++  G      + E   N
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD--SARRWNFLWVS-GRAGMVVLQEEKEN 83

Query: 82  YGVTSYDIGTGFGHFAIATEDA 103
           +            HF+   E +
Sbjct: 84  WQQQ---------HFSFRVEKS 96

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 49.3 bits (118), Expect = 5e-08
 Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DLD + ++YTE    K L +     +  S A        S  + E        
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREHDGGGTDL 65

Query: 86  SYDIGTGFGHFAIATED 102
             +   G  H + + E 
Sbjct: 66  FDETRPGLDHLSFSVES 82

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 49.1 bits (117), Expect = 7e-08
 Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 7/78 (8%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGV 84
           H  + V DL+R  +     F  + +   D  +       F   G       + +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 85  TSYDIGTGFGHFAIATED 102
              +       F I   D
Sbjct: 61  KLAERSYNHIAFKIDDAD 78

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 19/82 (23%), Positives = 25/82 (30%), Gaps = 12/82 (14%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H    V DL  +I FY +  G +L  + D        A+L  G        E  Y 
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYG 56

Query: 82  YGVTSYDIGTGFGHFAIATEDA 103
                Y       H+A     A
Sbjct: 57  GPAADYT------HYAFGIAAA 72

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 47.3 bits (112), Expect = 3e-07
 Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H V  V D+  TI+FY E  G   +  +       +   L FG ++ +   +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 82  YGVTSYDIGTGFGHFAIATED 102
               S           I +  
Sbjct: 76  EPKASRPTPGSADLCFITSTP 96

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 15/80 (18%), Positives = 21/80 (26%), Gaps = 12/80 (15%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
              H    V D+    +F  + FG+     R        NAF         F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-------NAFAVMRDN-DGFILTLMKGK 54

Query: 83  GVTSYDIGTGFGHFAIATED 102
            V          H     E 
Sbjct: 55  EVQ----YPKTFHVGFPQES 70

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 46.8 bits (111), Expect = 5e-07
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 9/102 (8%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
            DA G  +    + P+  Y++   G   E          N G+ +  +      V +  +
Sbjct: 44  RDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PVVTVDVE 99

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 202
            +  + E +    + LGGK       +  +      F D +G
Sbjct: 100 SIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFTDSEG 136

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 43.7 bits (103), Expect = 6e-06
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 4/73 (5%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG 90
             D DR   FY + FG  +    ++P+  YS    G   E          N G+      
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 91  TGFGHFAIATEDA 103
           T      +  E  
Sbjct: 90  TTPV-VTVDVESI 101

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 44.7 bits (105), Expect = 3e-06
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR  H V  V  +  T  FY++  GM+++  ++          L FG +Q   + E+   
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFG-DQKFNLHEVGKE 78

Query: 82  YGVTSYDIGTGFGHFAIATEDAL 104
           +   +     G     + TE  L
Sbjct: 79  FEPKAAHPVPGSLDICLITEVPL 101

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 44.1 bits (104), Expect = 4e-06
 Identities = 13/82 (15%), Positives = 21/82 (25%), Gaps = 7/82 (8%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
              H    V  L+ +I F+    G                    +   +++ V   T + 
Sbjct: 20  MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDR 74

Query: 83  GVTSY--DIGTGFGHFAIATED 102
             T       TG  H A     
Sbjct: 75  FQTPTFHRKRTGLNHLAFHAAS 96

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 43.3 bits (102), Expect = 6e-06
 Identities = 7/29 (24%), Positives = 11/29 (37%)

Query: 26 HAVYRVGDLDRTIKFYTECFGMKLLRKRD 54
          H    V DL++T  F    F  + +    
Sbjct: 7  HITLIVKDLNKTTAFLQNIFNAEEIYSSG 35

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 43.4 bits (102), Expect = 6e-06
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 7/83 (8%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H V  V D+  T  FY +  GMK +              L FG ++ +   +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR------IALEFGHQKINL-HQLGNE 61

Query: 82  YGVTSYDIGTGFGHFAIATEDAL 104
           +   + ++  G       T+  L
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVL 84

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 43.2 bits (101), Expect = 9e-06
 Identities = 10/38 (26%), Positives = 13/38 (34%)

Query: 17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD 54
            ++     H      DLD    FY    G KL R+  
Sbjct: 3  AMRNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP 40

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 42.7 bits (100), Expect = 4e-05
 Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY--G 83
           H      + +    FY    G++ + K  V ++  S   L +G +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRV-KMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPL 91

Query: 84  VTSYDIGTG-FGH--FAIATEDALG 105
           V     GT         + +ED+L 
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLH 116

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 15/82 (18%), Positives = 21/82 (25%), Gaps = 6/82 (7%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
            +        V  LD+     TE FG        V        F     E    +V    
Sbjct: 178 IQGMGSVELTVRRLDKMASTLTEIFGYTE-----VSRNDQEAIFQSIKGEAFGEIVVKYL 232

Query: 81  NYGVTSYDIGTGFGHFAIATED 102
           +        G    H AI  ++
Sbjct: 233 DGPTEKPGRG-SIHHLAIRVKN 253

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 15/82 (18%), Positives = 23/82 (28%), Gaps = 15/82 (18%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
                      +LDR + FYT   G + + ++           +  G  Q  F       
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQF------- 71

Query: 82  YGVTSYDIGTGFGHFAIATEDA 103
               + D    F H AI     
Sbjct: 72  --RAAADGTKPFYHIAINIAAN 91

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 40.6 bits (95), Expect = 6e-05
 Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           RF++ +  V D++R+  FY +  G+K+L         +     GF   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 83  GVTSYDI-GTGFGHFAIATED 102
              + +  G           D
Sbjct: 64  SSDAQEAYGRRNMLLYFEHAD 84

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 20/104 (19%), Positives = 30/104 (28%), Gaps = 18/104 (17%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN--AYAQVAIS 158
           E  +G+            Y +   G AE             G  E        +  V  +
Sbjct: 183 EAVVGLTHSSMEIAAGQNYRVLKAGDAEV-----------GGCMEPPMPGVPNHWHVYFA 231

Query: 159 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 202
            DD   +A          GG++  +P  IP    +     DP G
Sbjct: 232 VDDADATAAKA----AAAGGQVIAEPADIPS-VGRFAVLSDPQG 270

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 10/90 (11%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL--GFGPEQSHFVVELTY 80
              H  Y   D D   K+Y E FG   L + + PE+      +       +    V++  
Sbjct: 9   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 68

Query: 81  NYGVTS--------YDIGTGFGHFAIATED 102
                S        ++   G  H A   +D
Sbjct: 69  PLNDESTVAKWLAKHNGRAGLHHMAWRVDD 98

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 5/54 (9%)

Query: 26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELT 79
          H   RV D+ + ++ Y E  G+       +  +     +L    E   F + L 
Sbjct: 10 HVQLRVLDMSKALEHYVELLGLIE-----MDRDDQGRVYLKAWTEVDKFSLVLR 58

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 39.1 bits (91), Expect = 6e-04
 Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 5/58 (8%)

Query: 22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELT 79
           R  HA  RV +L+  I FY    G+          +     +     E+ H    + 
Sbjct: 7  LRPGHAQVRVLNLEEGIHFYRNVLGLVE-----TGRDDQGRVYFKCWDERDHSCYIIR 59

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	220
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.9
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.89
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.86
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.85
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.85
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.84
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.84
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.83
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.83
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.81
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.81
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.8
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.8
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.8
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.79
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.78
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.78
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.77
3ghj_A	141	Putative integron gene cassette protein; integron	99.77
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.76
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.75
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.75
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.75
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.74
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.74
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.74
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.74
2i7r_A	118	Conserved domain protein; structural genomics cons	99.74
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.73
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.72
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.72
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.72
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.72
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.72
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.72
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.71
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.71
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.71
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.71
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.71
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.7
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.69
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.69
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.69
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.69
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.69
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.68
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.68
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.68
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.67
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.66
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.65
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.65
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.65
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.64
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.64
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.63
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.63
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.62
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.61
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.61
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.61
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.6
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.6
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.6
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.58
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.56
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.55
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.55
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.55
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.54
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.54
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.54
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.53
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.53
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.53
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.53
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.53
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.52
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.5
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.45
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.45
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.42
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.37
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.32
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.3
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.29
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.28
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.25
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.17
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.12
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.08
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.08
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.07
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.06
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.05
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.01
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.01
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	98.86
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.04
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.46
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	95.78
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	95.36
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	94.8
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	93.86
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	93.3
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	93.16
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	93.06
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	93.04
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	92.71
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	92.45
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	91.65
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	91.32
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	91.31
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	90.82
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	90.77
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	89.01
2p25_A	126	Glyoxalase family protein; structural genomics, MC	88.88
3ghj_A	141	Putative integron gene cassette protein; integron	87.66
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	87.5
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	87.18
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	86.76
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	85.19
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	84.65
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	84.64
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	84.56
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	84.43
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	83.47
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	83.26
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	82.62
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	82.35
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	81.52

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.90  E-value=8.3e-22  Score=171.94  Aligned_cols=188  Identities=35%  Similarity=0.642  Sum_probs=137.4

Q ss_pred             eccccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCC-----------CCceeEEEeeecCCCceeEEEEEeecC
Q 027676           15 EWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVELTYNYG   83 (220)
Q Consensus        15 ~~~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~lel~~~~~   83 (220)
                      .+++|.+++++|++|.|+|+++|++||+++|||++..+...+           .+++..++++++++..+..++|..+++
T Consensus        19 ~~~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~   98 (330)
T 3zi1_A           19 YFQSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYG   98 (330)
T ss_dssp             CGGGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETT
T ss_pred             eeeecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCC
Confidence            366777789999999999999999999999999998876655           456788999887767788999988877


Q ss_pred             CcccCCCCceeEEEEEeCcc------------------------------------------------------------
Q 027676           84 VTSYDIGTGFGHFAIATEDA------------------------------------------------------------  103 (220)
Q Consensus        84 ~~~~~~g~~~~~~~~~~~~~------------------------------------------------------------  103 (220)
                      ...+..+.++.|++|.|+++                                                            
T Consensus        99 ~~~~~~~~g~~hiaf~V~d~~~~l~~~G~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~Dl~~a~~FY~  178 (330)
T 3zi1_A           99 VGDYKLGNDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWC  178 (330)
T ss_dssp             CCCCCBCSSEEEEEEECHHHHHHHHHHTCCCEEEETTEEEEECTTSCEEEEESSCCTTSCSEEEEEEEESCHHHHHHHHH
T ss_pred             CCccccCCCeeEEEEECchHHHHHHHcCCceeccCCceEEEECCCCCEEEEEecCCCCCCceeEEEEECCCHHHHHHHHH
Confidence            76666778889999999882                                                            


Q ss_pred             --ccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHHHHHHHcCCe
Q 027676          104 --LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       104 --~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~~  179 (220)
                        +|+++........    .+++.+++.  ...+++....+  +...+.++.|++|.|+  |+++++++|    +++|++
T Consensus       179 ~vLG~~~~~~~~~~~----~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl----~~~G~~  246 (330)
T 3zi1_A          179 NLLGMKIYENDEEKQ----RALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLM----KRENQK  246 (330)
T ss_dssp             HTTCCEEEEEETTTT----EEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHH----HHTTCE
T ss_pred             HhcCCEEEeeccCCc----EEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHH----HHcCCc
Confidence              2222222211110    234444332  44555544321  2234457889999996  667777777    899999


Q ss_pred             eecCCccc--CC-CCceEEEEECCCCCEEEEEechhhh
Q 027676          180 ITRQPGSI--PG-LNTKITSFVDPDGWKTVLVDNEDFL  214 (220)
Q Consensus       180 i~~~p~~~--~~-~~~~~~~~~DPdG~~iElv~~~~~~  214 (220)
                      +..+|...  |+ ...+.+||+|||||.|||++..+++
T Consensus       247 i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          247 ILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             EEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             EecCceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence            88877643  32 1348899999999999999998886

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.89  E-value=8.6e-22  Score=147.85  Aligned_cols=132  Identities=46%  Similarity=0.829  Sum_probs=95.3

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      ++++|+.|.|+|+++|++||+++|||++..+...+++.+..+++..++...+..++|....+.                 
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-----------------   63 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV-----------------   63 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTC-----------------
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCC-----------------
Confidence            479999999999999999999999999987655455556666766543222344555432211                 


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                                                .+...+.+..|+||.|+|+++++++|    +++|+++.
T Consensus        64 ------------------------------------------~~~~~~~~~~~~~~~v~d~~~~~~~l----~~~G~~~~   97 (135)
T 1f9z_A           64 ------------------------------------------DKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVT   97 (135)
T ss_dssp             ------------------------------------------CCCCCCSSEEEEEEECSCHHHHHHHH----HHTTCEEE
T ss_pred             ------------------------------------------CcccCCCCccEEEEEeCCHHHHHHHH----HHCCCEEe
Confidence                                                      11123447889999999999999999    79999999


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEechhhhhh
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  216 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~~~~  216 (220)
                      .+|...+.+..+.+||+|||||.|||++...-..+
T Consensus        98 ~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~~~~  132 (135)
T 1f9z_A           98 REAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRG  132 (135)
T ss_dssp             EEEEECTTSCCEEEEEECTTSCEEEEEEC------
T ss_pred             cCCccCCCCceeEEEEECCCCCEEEEEecCCCCCC
Confidence            88876665444789999999999999998665443

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.86  E-value=1e-21  Score=152.81  Aligned_cols=127  Identities=17%  Similarity=0.123  Sum_probs=87.8

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      ...+|++|++|.|+|+++|++||+++|||++..+...+  ..+...+..........+.+....                
T Consensus        22 ~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~--~~~~~~~~~~~~~~~~~l~~~~~~----------------   83 (155)
T 4g6x_A           22 SNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVG--ADRWLTVVSPEAPDGTQLLLEPSS----------------   83 (155)
T ss_dssp             -CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEET--TEEEEEEECTTCTTSCEEEEEECC----------------
T ss_pred             cCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCC--CceEEEEeccCCCcceEEEeccCC----------------
Confidence            34579999999999999999999999999987764332  233333332111111111110000                


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCc---ccccCCceeeEEEEeCCHHHHHHHHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT---EYTKGNAYAQVAISTDDVYKSAEVVNLVTQE  175 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~---~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~  175 (220)
                                     .                          ....   ....+.|..|++|.|+|+++++++|    ++
T Consensus        84 ---------------~--------------------------~~~~~~~~~~~~~g~~~l~f~VdDvda~~~~l----~~  118 (155)
T 4g6x_A           84 ---------------H--------------------------AAVTPFKEALVADGIPAASFAVDDIAAEYERL----SA  118 (155)
T ss_dssp             ---------------S--------------------------TTHHHHHHHHHHTTCCSEEEEESCHHHHHHHH----HH
T ss_pred             ---------------C--------------------------ccccccccccccCCceEEEeeechhhhhhhHH----hc
Confidence                           0                          0000   0112457889999999999999999    79


Q ss_pred             cCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          176 LGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       176 ~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +|+++..+|...+++  +.+||+|||||+|||+|.
T Consensus       119 ~Gv~~~~~p~~~~~g--~~~~f~DPdGn~iel~q~  151 (155)
T 4g6x_A          119 LGVRFTQEPTDMGPV--VTAILDDTCGNLIQLMQI  151 (155)
T ss_dssp             TTCCEEEEEEECSSC--EEEEEECSSSCEEEEEEC
T ss_pred             CCcEEeeCCEEcCCe--EEEEEECCCCCEEEEEEE
Confidence            999999998876653  889999999999999985

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.86  E-value=9.5e-21  Score=150.98  Aligned_cols=138  Identities=26%  Similarity=0.502  Sum_probs=103.1

Q ss_pred             cccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCc---------------eeEEEEEee
Q 027676           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS---------------HFVVELTYN   81 (220)
Q Consensus        17 ~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~---------------~~~lel~~~   81 (220)
                      +.....+++|++|.|+|+++|++||+++|||++..+...+.+.+..++++.+....               +..++|...
T Consensus        28 ~~~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  107 (187)
T 3vw9_A           28 PSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN  107 (187)
T ss_dssp             GGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEe
Confidence            34566899999999999999999999999999998777667778888887643110               245555443


Q ss_pred             cCCcccCCCCceeEEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCccc----ccCCceeeEEE
Q 027676           82 YGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY----TKGNAYAQVAI  157 (220)
Q Consensus        82 ~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~----~~~~g~~Hiaf  157 (220)
                      ++......                                                      .++    ....|+.|+||
T Consensus       108 ~~~~~~~~------------------------------------------------------~~~~~g~~~~~g~~hl~f  133 (187)
T 3vw9_A          108 WGTEDDET------------------------------------------------------QSYHNGNSDPRGFGHIGI  133 (187)
T ss_dssp             TTGGGCTT------------------------------------------------------CCCCCSSSSSCBEEEEEE
T ss_pred             cCCCCCCc------------------------------------------------------cccccCCCCCCceeEEEE
Confidence            32211000                                                      001    12248899999


Q ss_pred             EeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhhh
Q 027676          158 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  214 (220)
Q Consensus       158 ~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~~  214 (220)
                      .|+|+++++++|    +++|+++..+|...+.  .+++||+|||||.|||+++...+
T Consensus       134 ~v~dv~~~~~~l----~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~  184 (187)
T 3vw9_A          134 AVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMA  184 (187)
T ss_dssp             ECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGSG
T ss_pred             EECCHHHHHHHH----HHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEccccc
Confidence            999999999999    7999999988865433  35789999999999999987764

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.85  E-value=6.7e-20  Score=136.41  Aligned_cols=132  Identities=21%  Similarity=0.291  Sum_probs=92.9

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      .+++++|++|.|+|+++|++||+++|||++..+...+++....+++..+    ...++|..+.+..+...+.        
T Consensus         2 ~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~--------   69 (134)
T 3l7t_A            2 KLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAP--------   69 (134)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCC--------
T ss_pred             ceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCC--------
Confidence            4679999999999999999999999999998776545444445555543    2355665422111000000        


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccc-cCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT-KGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~-~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                     +                          ...... .+.|+.|+||.|+|+++++++|    +++|+
T Consensus        70 ---------------~--------------------------~~~~~~~~~~g~~~~~~~v~d~~~~~~~l----~~~G~  104 (134)
T 3l7t_A           70 ---------------P--------------------------ERISWPREACGLRHLAFYVEDVEASRQEL----IALGI  104 (134)
T ss_dssp             ---------------C--------------------------CCCCSSSCCSEEEEEEEECSCHHHHHHHH----HHHTC
T ss_pred             ---------------c--------------------------cccCCCCCCCCeEEEEEEECCHHHHHHHH----HhCCC
Confidence                           0                          000011 4558899999999999999999    79999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      ++..++...+. +.+.+||+|||||.|||+|
T Consensus       105 ~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A          105 RVEEVRYDDYT-GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             CCCCCEECTTS-CCEEEEEECTTCCEEEEEC
T ss_pred             cccceeccCCC-ceEEEEEECCCCCEEEEeC
Confidence            99876655333 3488999999999999986

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.85  E-value=2.4e-20  Score=138.43  Aligned_cols=124  Identities=20%  Similarity=0.270  Sum_probs=90.9

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +++++|++|.|+|+++|++||+++|||++..+...++.++..+|+..+   .+..++|....+...              
T Consensus         1 gm~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~---~~~~l~l~~~~~~~~--------------   63 (127)
T 3e5d_A            1 GMKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFE---DGARLEIMSRTDVTG--------------   63 (127)
T ss_dssp             -CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECS---SSCEEEEEEETTCCC--------------
T ss_pred             CCEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcC---CCcEEEEEecCCCCC--------------
Confidence            378999999999999999999999999998765444445566676653   134555543321110              


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G  177 (220)
                                                                 .+...+.|+.|+||.|+|   ++++++++    +++|
T Consensus        64 -------------------------------------------~~~~~~~g~~hi~~~v~d~~~v~~~~~~l----~~~G   96 (127)
T 3e5d_A           64 -------------------------------------------KTTGENLGWAHIAISTGTKEAVDELTEKL----RQDG   96 (127)
T ss_dssp             -------------------------------------------CCCSSCSSCCCEEEECSSHHHHHHHHHHH----HHTT
T ss_pred             -------------------------------------------CCCcCCCceEEEEEEcCCHHHHHHHHHHH----HHcC
Confidence                                                       011234578999999999   77888888    7999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      +++..+|...+. +.+.+||+|||||.|||+.
T Consensus        97 ~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~  127 (127)
T 3e5d_A           97 FAIAGEPRMTGD-GYYESVVLDPEGNRIEITW  127 (127)
T ss_dssp             CCEEEEEEECTT-SCEEEEEECTTSCEEEEEC
T ss_pred             CeEecCcccCCC-CcEEEEEECCCCCEEEEeC
Confidence            999988765444 3478999999999999973

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.84  E-value=8.2e-20  Score=139.64  Aligned_cols=126  Identities=48%  Similarity=0.785  Sum_probs=90.4

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +.+.+++|+.|.|+|+++|++||+++|||++..+...+++.+..+++..++...+..++|....+.              
T Consensus         4 m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~--------------   69 (144)
T 2c21_A            4 MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGV--------------   69 (144)
T ss_dssp             --CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTC--------------
T ss_pred             CccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCC--------------
Confidence            456899999999999999999999999999987654444445566766542212344555432110              


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                                                   .....+.+..|++|.|+|+++++++|    +++|+
T Consensus        70 ---------------------------------------------~~~~~~~~~~h~~f~v~d~~~~~~~l----~~~G~  100 (144)
T 2c21_A           70 ---------------------------------------------TSYKHDEAYGHIAIGVEDVKELVADM----RKHDV  100 (144)
T ss_dssp             ---------------------------------------------CCCCCCSSEEEEEEEESCHHHHHHHH----HHTTC
T ss_pred             ---------------------------------------------CCCCCCCCceEEEEEeCCHHHHHHHH----HHCCC
Confidence                                                         01123457889999999999999999    79999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++..+     .+...++||+|||||.|||++...
T Consensus       101 ~~~~~-----~g~~~~~~~~DPdG~~iel~~~~~  129 (144)
T 2c21_A          101 PIDYE-----DESGFMAFVVDPDGYYIELLNEKT  129 (144)
T ss_dssp             CEEEE-----CSSSSEEEEECTTSCEEEEEEHHH
T ss_pred             EEecc-----CCcEEEEEEECCCCCEEEEEEcCc
Confidence            98765     222244599999999999999754

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.84  E-value=9.4e-20  Score=145.11  Aligned_cols=157  Identities=25%  Similarity=0.446  Sum_probs=102.7

Q ss_pred             CCccCccccccce--------eeccccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCC--
Q 027676            1 MAEASPAAANAEL--------LEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE--   70 (220)
Q Consensus         1 ~~~~~~~~~~~~~--------~~~~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--   70 (220)
                      ||++.|+..+...        ...+.+.+++++|++|.|+|+++|++||+++|||++..+...+++.+..++++.+..  
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~   80 (184)
T 2za0_A            1 MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKND   80 (184)
T ss_dssp             ---CCCCCCCCCHHHHHHTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGG
T ss_pred             CCCCCcccCCcchhhhhcccCCcCCCccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEeccccccc
Confidence            6777766643322        223344578999999999999999999999999999876544444566667664210  


Q ss_pred             -------------CceeEEEEEeecCCcccCCCCceeEEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEE
Q 027676           71 -------------QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLEL  137 (220)
Q Consensus        71 -------------~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel  137 (220)
                                   ..+..|+|....+....                           +..++                  
T Consensus        81 ~~~~~~~~~~~~~~~~~~l~L~~~~~~~~~---------------------------~~~~~------------------  115 (184)
T 2za0_A           81 IPKDKSEKTAWTFSRKATLELTHNWGTEDD---------------------------ETQSY------------------  115 (184)
T ss_dssp             SCSSHHHHHHHHTTSSSEEEEEEETTGGGC---------------------------TTCCC------------------
T ss_pred             CCcccchheeeecCCCceEEEEecCCCCCC---------------------------ccccc------------------
Confidence                         01234444332211000                           00000                  


Q ss_pred             EEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          138 TYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       138 ~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                          . .......|+.|+||.|+|+++++++|    +++|+++..+|...++  .+.+||+|||||.|||++...+
T Consensus       116 ----~-~~~~~~~g~~hi~f~v~dvd~~~~~l----~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          116 ----H-NGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             ----C-CSSSSSCCEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTG
T ss_pred             ----c-cCCCCCCCeeEEEEEeCCHHHHHHHH----HHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcc
Confidence                0 00011247889999999999999999    7999999988765433  3679999999999999998776

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.83  E-value=8.5e-20  Score=135.85  Aligned_cols=129  Identities=19%  Similarity=0.249  Sum_probs=88.6

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.+++|++|.|+|+++|++||+++|||++..+...++.....+++..+    +..++|....+..+...           
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~-----------   67 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIA-----------   67 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTH-----------
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhh-----------
Confidence            478999999999999999999999999987665444434555666542    22344433221110000           


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  180 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i  180 (220)
                                       ++                        .......|+.||||.|+|+++++++|    +++|+++
T Consensus        68 -----------------~~------------------------~~~~~~~g~~hi~~~v~d~~~~~~~l----~~~G~~~  102 (134)
T 3rmu_A           68 -----------------GF------------------------LQKNKAGGMHHICIEVDNINAAVMDL----KKKKIRS  102 (134)
T ss_dssp             -----------------HH------------------------HHHCTTCEEEEEEEEESCHHHHHHHH----HHTTCTT
T ss_pred             -----------------hh------------------------hhccCCCCceEEEEEcCCHHHHHHHH----HHcCCcc
Confidence                             00                        00123458899999999999999999    7999998


Q ss_pred             ecCCcccCCCCceEEEE--ECCCCCEEEEEe
Q 027676          181 TRQPGSIPGLNTKITSF--VDPDGWKTVLVD  209 (220)
Q Consensus       181 ~~~p~~~~~~~~~~~~~--~DPdG~~iElv~  209 (220)
                      ..++......+.+.+|+  +|||||.|||+|
T Consensus       103 ~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A          103 LSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             BCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             cCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            77654333333456777  899999999997

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.83  E-value=5.4e-20  Score=138.17  Aligned_cols=126  Identities=21%  Similarity=0.217  Sum_probs=87.4

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEee-cCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKR-DVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      ++++|++|.|+|+++|++||+ +|||++..+. ..+......+|+..+    ...++|....+.....            
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~------------   68 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPI------------   68 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTH------------
T ss_pred             eeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChH------------
Confidence            789999999999999999999 9999986542 223333455555442    2345554321110000            


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  180 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i  180 (220)
                                                                ......+.|+.||||.|+|+++++++|    +++|+++
T Consensus        69 ------------------------------------------~~~~~~~~g~~hiaf~v~di~~~~~~l----~~~G~~~  102 (133)
T 3hdp_A           69 ------------------------------------------NKTIKKGSTPYHICYEVEDIQKSIEEM----SQIGYTL  102 (133)
T ss_dssp             ------------------------------------------HHHTTTSCEEEEEEEEESCHHHHHHHH----TTTTEEE
T ss_pred             ------------------------------------------HHHHhcCCceEEEEEEcCCHHHHHHHH----HHcCCcc
Confidence                                                      000112568899999999999999999    7999999


Q ss_pred             ecCCcccCC-CCceEEEEECCCCCEEEEEec
Q 027676          181 TRQPGSIPG-LNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       181 ~~~p~~~~~-~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ..+|.+..+ .+.+++|++|||||.|||+|+
T Consensus       103 ~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A          103 FKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             ccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            876543211 234889999999999999984

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.82  E-value=6.7e-19  Score=131.38  Aligned_cols=124  Identities=20%  Similarity=0.262  Sum_probs=88.0

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      -+.+++|+.|.|+|+++|++||+++|||++..+...+.+ ...+.+..  ......+.|......               
T Consensus        10 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~--~~~~~~l~l~~~~~~---------------   71 (133)
T 4hc5_A           10 MIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVP--PGAQTQVALGLPSWY---------------   71 (133)
T ss_dssp             SCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEEC--TTCSCEEEEECGGGC---------------
T ss_pred             cccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEEC--CCCceEEEEecCccc---------------
Confidence            357999999999999999999999999999876432221 22223322  112223333211100               


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCe
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~  179 (220)
                                                                  .+.....+..|++|.|+|+++++++|    +++|++
T Consensus        72 --------------------------------------------~~~~~~~~~~~~~~~v~d~~~~~~~l----~~~G~~  103 (133)
T 4hc5_A           72 --------------------------------------------EDGRKPGGYTGISLITRDIDEAYKTL----TERGVT  103 (133)
T ss_dssp             --------------------------------------------SSCCCSCEEEEEEEEESCHHHHHHHH----HHTTCE
T ss_pred             --------------------------------------------ccccCCCCeEEEEEEeCCHHHHHHHH----HHCCCE
Confidence                                                        00112246789999999999999999    789999


Q ss_pred             eecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          180 ITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       180 i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +..+|...+.+. +.+||+|||||.|||++.
T Consensus       104 ~~~~~~~~~~g~-~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A          104 FTKPPEMMPWGQ-RATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             ESSSCEECTTSC-EEEEEECTTCEEEEEEEC
T ss_pred             eecCCCcCCCCC-EEEEEECCCCCEEEEEeC
Confidence            998887766543 889999999999999974

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.81  E-value=7.2e-19  Score=134.45  Aligned_cols=134  Identities=16%  Similarity=0.195  Sum_probs=89.7

Q ss_pred             ccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCC-----------CCceeEEEeeecCCCceeEEEEEeecCCcc
Q 027676           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVELTYNYGVTS   86 (220)
Q Consensus        18 ~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~   86 (220)
                      ++.+.+++|++|.|+|+++|++||++ |||++..+...+           ......+++..+  +.+..++|....+...
T Consensus         6 ~~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~g~~~l~l~~~~~~~~   82 (153)
T 1ss4_A            6 KNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTP--DGHSRIELSRFLTPPT   82 (153)
T ss_dssp             TCCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECT--TSSCEEEEEEEEESCC
T ss_pred             cccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECC--CCCcEEEEEEecCCCC
Confidence            34568999999999999999999999 999987653311           122334444432  1123333322100000


Q ss_pred             cCCCCceeEEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHH
Q 027676           87 YDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  166 (220)
Q Consensus        87 ~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~  166 (220)
                      ..                                                    ........+.|+.||||.|+|+++++
T Consensus        83 ~~----------------------------------------------------~~~~~~~~~~g~~hl~~~v~d~~~~~  110 (153)
T 1ss4_A           83 IA----------------------------------------------------DHRTAPVNALGYLRVMFTVEDIDEMV  110 (153)
T ss_dssp             CC----------------------------------------------------BCTTCCSSSBEEEEEEEEESCHHHHH
T ss_pred             cc----------------------------------------------------cccCCCCCCCceEEEEEEeCCHHHHH
Confidence            00                                                    00000123457889999999999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          167 EVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       167 ~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++|    +++|+++..+|...+. +.+.+||+|||||.|||+++.
T Consensus       111 ~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A          111 SRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             HHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEEC
T ss_pred             HHH----HHCCCeecCCCcccCC-ceEEEEEECCCCCEEEEEecc
Confidence            999    7999999888765543 358899999999999999874

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.81  E-value=3.1e-19  Score=139.46  Aligned_cols=131  Identities=18%  Similarity=0.274  Sum_probs=91.6

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      ..+.+++|++|.|+|+++|++||+++|||++..+...++.....+++..+    ...++|..........          
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~----------   69 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPI----------   69 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHH----------
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChH----------
Confidence            34579999999999999999999999999998765544444556666542    2344443221110000          


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCc-ccccCCceeeEEEEeCCHHHHHHHHHHHHHHcC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELG  177 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~-~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G  177 (220)
                                                                  .. ....+.|+.||||.|+|+++++++|    +++|
T Consensus        70 --------------------------------------------~~~~~~~~~g~~Hiaf~V~Did~~~~~l----~~~G  101 (161)
T 3oa4_A           70 --------------------------------------------AKFIQKRGEGIHHIAIGVKSIEERIQEV----KENG  101 (161)
T ss_dssp             --------------------------------------------HHHHHHHCSEEEEEEEECSCHHHHHHHH----HHTT
T ss_pred             --------------------------------------------HHHhhcCCCCeEEEEEEECCHHHHHHHH----HHCC
Confidence                                                        00 0123568999999999999999999    7999


Q ss_pred             CeeecC-CcccCCCCceEEEE--ECCCCCEEEEEechh
Q 027676          178 GKITRQ-PGSIPGLNTKITSF--VDPDGWKTVLVDNED  212 (220)
Q Consensus       178 ~~i~~~-p~~~~~~~~~~~~~--~DPdG~~iElv~~~~  212 (220)
                      +++..+ |...++ +.+++|+  +|||||.|||+++..
T Consensus       102 ~~~~~~~~~~~~~-g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A          102 VQMINDEPVPGAR-GAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             CCBSCSSCEECGG-GCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             CEecccCcccCCC-CcEEEEEeccCCCeEEEEEEecCC
Confidence            999877 554322 2366777  499999999999743

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.80  E-value=1e-18  Score=130.39  Aligned_cols=124  Identities=23%  Similarity=0.256  Sum_probs=88.4

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +...+++|+.|.|+|+++|++||+++|||++..+.   +   ..+++..+    ...+.|........            
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~---~~~~~~~~----~~~~~l~~~~~~~~------------   63 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A---GRIALEFG----HQKINLHQLGNEFE------------   63 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T---TEEEEEET----TEEEEEEETTSCCS------------
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEec---C---CeEEEEcC----CEEEEEEcCCCCcc------------
Confidence            45679999999999999999999999999998752   1   13344432    13344432110000            


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC-HHHHHHHHHHHHHHcC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD-VYKSAEVVNLVTQELG  177 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D-v~a~~~~l~~~~~~~G  177 (220)
                                                                  +.......+..|+||.|+| +++++++|    +++|
T Consensus        64 --------------------------------------------~~~~~~~~~~~~~~~~v~dd~~~~~~~l----~~~G   95 (133)
T 3ey7_A           64 --------------------------------------------PKAQNVRVGSADLCFITDTVLSDAMKHV----EDQG   95 (133)
T ss_dssp             --------------------------------------------SCCTTCCTTCCEEEEECSSCHHHHHHHH----HHTT
T ss_pred             --------------------------------------------ccCCCCCCCccEEEEEeCcHHHHHHHHH----HHCC
Confidence                                                        0001234478999999997 99999999    7999


Q ss_pred             CeeecCCcccCCC--CceEEEEECCCCCEEEEEechh
Q 027676          178 GKITRQPGSIPGL--NTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       178 ~~i~~~p~~~~~~--~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++..+|...++.  ..+.+||+|||||.|||+++.+
T Consensus        96 ~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           96 VTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             CCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             CccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            9998877554432  2378999999999999999753

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.80  E-value=1.5e-18  Score=128.18  Aligned_cols=124  Identities=20%  Similarity=0.292  Sum_probs=83.9

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.+++|++|.|+|+++|++||+++|||++..+...+++.-...++..++   . .++|........              
T Consensus         3 ~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~-~l~l~~~~~~~~--------------   64 (126)
T 2p25_A            3 FKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGS---Q-ELEIFISDQFPA--------------   64 (126)
T ss_dssp             TSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETT---E-EEEEEECTTCCC--------------
T ss_pred             ccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCC---e-EEEEEeccCCCC--------------
Confidence            5789999999999999999999999999876532222111112233321   1 344432110000              


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  180 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i  180 (220)
                                                                ......+.|..|+||.|+|+++++++|    +++|+++
T Consensus        65 ------------------------------------------~~~~~~~~g~~~~~~~v~d~~~~~~~l----~~~G~~~   98 (126)
T 2p25_A           65 ------------------------------------------RPSYPEALGLRHLAFKVEHIEEVIAFL----NEQGIET   98 (126)
T ss_dssp             ------------------------------------------CCCSSCCSSCCCEEEECSCHHHHHHHH----HHTTCCC
T ss_pred             ------------------------------------------CCCCCCCccceEEEEEeCCHHHHHHHH----HHcCCcc
Confidence                                                      000112447889999999999999999    7999998


Q ss_pred             ecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          181 TRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       181 ~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      ..+|...+. +.+.+||+|||||.|||++
T Consensus        99 ~~~~~~~~~-g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           99 EPLRVDDFT-GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             CCCEECTTT-CCEEEEEECTTCCEEEEEC
T ss_pred             ccccccCCC-CcEEEEEECCCCCEEEeeC
Confidence            766653333 3478999999999999985

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.80  E-value=1.2e-18  Score=131.67  Aligned_cols=124  Identities=19%  Similarity=0.174  Sum_probs=86.6

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      .+.+++|+.|.|+|+++|++||+++|||++..+...+++.+..+++.     ++..++|....+....            
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-----~~~~l~l~~~~~~~~~------------   64 (136)
T 2rk0_A            2 SLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-----GGLSIVLREHDGGGTD------------   64 (136)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-----TSCEEEEEEETTCSSS------------
T ss_pred             CCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-----CCCEEEEEeCCCCccc------------
Confidence            35789999999999999999999999999987654332234444443     1234555432111000            


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEe---CCHHHHHHHHHHHHHHc
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST---DDVYKSAEVVNLVTQEL  176 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v---~Dv~a~~~~l~~~~~~~  176 (220)
                                                                  .......|..|+||.|   +|+++++++|    +++
T Consensus        65 --------------------------------------------~~~~~~~g~~h~~f~v~~~~d~~~~~~~l----~~~   96 (136)
T 2rk0_A           65 --------------------------------------------LFDETRPGLDHLSFSVESMTDLDVLEERL----AKA   96 (136)
T ss_dssp             --------------------------------------------CCCTTSSEEEEEEEEESSHHHHHHHHHHH----HHH
T ss_pred             --------------------------------------------CCCCCCCCcceEEEEeCCHHHHHHHHHHH----HHC
Confidence                                                        0001234788999999   7888888888    799


Q ss_pred             CCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          177 GGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       177 G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      |+++. ++...+.+  +.+||+|||||.|||++..
T Consensus        97 G~~~~-~~~~~~~g--~~~~~~DPdG~~iel~~~~  128 (136)
T 2rk0_A           97 GAAFT-PTQELPFG--WILAFRDADNIALEAMLGR  128 (136)
T ss_dssp             TCCBC-CCEEETTE--EEEEEECTTCCEEEEEEEC
T ss_pred             CCccc-CccccCCc--eEEEEECCCCCEEEEEEcC
Confidence            99986 44433332  8899999999999999864

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.80  E-value=8e-19  Score=134.44  Aligned_cols=131  Identities=18%  Similarity=0.193  Sum_probs=89.2

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCC------ceeEEEeeecCCCceeEEEEEeecCCcccCCCCc
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG   92 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~------~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~   92 (220)
                      ..+.+++|++|.|+|++++++||+++|||++..+...++.      .-...++..+   .+..++|....+....     
T Consensus        15 ~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~l~~~~~~~~~-----   86 (156)
T 3kol_A           15 GNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITP---DGTILDLFGEPELSPP-----   86 (156)
T ss_dssp             TSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECT---TSCEEEEEECTTCCCS-----
T ss_pred             cccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeC---CCCEEEEEecCCCCcC-----
Confidence            4457999999999999999999999999999763222110      0012333332   2234444332111000     


Q ss_pred             eeEEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHH
Q 027676           93 FGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVN  170 (220)
Q Consensus        93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~  170 (220)
                                                                       ...+.....+..|+||.|+  |+++++++| 
T Consensus        87 -------------------------------------------------~~~~~~~~~~~~h~~~~v~~~d~~~~~~~l-  116 (156)
T 3kol_A           87 -------------------------------------------------DPNPEKTFTRAYHLAFDIDPQLFDRAVTVI-  116 (156)
T ss_dssp             -------------------------------------------------SSSTTCCCSSCCEEEEECCGGGHHHHHHHH-
T ss_pred             -------------------------------------------------CCCCCCCCCceEEEEEEecHHHHHHHHHHH-
Confidence                                                             0001223458899999999  999999999 


Q ss_pred             HHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          171 LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       171 ~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                         +++|+++..+|...+.+  +.+||+|||||.|||+++..
T Consensus       117 ---~~~G~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A          117 ---GENKIAIAHGPVTRPTG--RGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             ---HHTTCCEEEEEEEC-CC--EEEEEECTTSCEEEEEECCC
T ss_pred             ---HHCCCccccCceecCCc--cEEEEECCCCCEEEEEecCC
Confidence               79999998877665443  68999999999999998753

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.79  E-value=5.9e-19  Score=137.02  Aligned_cols=135  Identities=17%  Similarity=0.181  Sum_probs=87.1

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCc-eeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK-YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ....+++|++|.|+|+++|++||+++|||++..+...+... ....+.+... .                          
T Consensus        15 ~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~-~--------------------------   67 (159)
T 3gm5_A           15 LDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPT-K--------------------------   67 (159)
T ss_dssp             CCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEEC-C--------------------------
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccc-c--------------------------
Confidence            45589999999999999999999999999876543322100 0001110000 0                          


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCc-cc-----ccCCceeeEEEEeCCHHHHHHHHHH
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-EY-----TKGNAYAQVAISTDDVYKSAEVVNL  171 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~-~~-----~~~~g~~Hiaf~v~Dv~a~~~~l~~  171 (220)
                                         ....++++..+    ...++|....+.. ++     ..+.|+.||||.|+|+++++++|  
T Consensus        68 -------------------~~~~~~~~~~g----~~~leL~~~~~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l--  122 (159)
T 3gm5_A           68 -------------------ARAKLAFFELG----PLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEEL--  122 (159)
T ss_dssp             -------------------CCEEEEEEEET----TEEEEEEEECSSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHH--
T ss_pred             -------------------ceEEEEEEecC----CEEEEEEEECCCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHH--
Confidence                               00111112111    2334444332211 11     13668999999999999999999  


Q ss_pred             HHHHcCCeeecCCcccCCCCceEEEEECCC--CCEEEEEec
Q 027676          172 VTQELGGKITRQPGSIPGLNTKITSFVDPD--GWKTVLVDN  210 (220)
Q Consensus       172 ~~~~~G~~i~~~p~~~~~~~~~~~~~~DPd--G~~iElv~~  210 (220)
                        +++|+++..++.. .  +.+++||+|||  |++|||+++
T Consensus       123 --~~~G~~~~~~~~~-~--g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A          123 --YRKGMKVIQKGDF-E--GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             --HHTTCCEEEEEEE-T--TEEEEEESCHHHHSSEEEEEEE
T ss_pred             --HHCCCcEeecccc-C--CeeEEEEeccccCcEEEEEEec
Confidence              7999999766532 2  35899999999  999999986

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.78  E-value=4.6e-18  Score=130.84  Aligned_cols=126  Identities=20%  Similarity=0.206  Sum_probs=87.2

Q ss_pred             ccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        18 ~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ++.+.+++|++|.|+|++++++||+++|||++..+.   +   ..+++..+    ...++|........           
T Consensus        18 ~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~---~~~~l~~~----~~~l~l~~~~~~~~-----------   76 (152)
T 3huh_A           18 QMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q---NRKALIFG----AQKINLHQQEMEFE-----------   76 (152)
T ss_dssp             --CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T---TEEEEEET----TEEEEEEETTBCCS-----------
T ss_pred             CcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C---CeEEEEeC----CeEEEEeccCCcCC-----------
Confidence            355689999999999999999999999999998762   1   13444442    13344432110000           


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC-CHHHHHHHHHHHHHHc
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD-DVYKSAEVVNLVTQEL  176 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~-Dv~a~~~~l~~~~~~~  176 (220)
                                                                   +.......|..|+||.++ |+++++++|    +++
T Consensus        77 ---------------------------------------------~~~~~~~~g~~hi~f~~~~dl~~~~~~l----~~~  107 (152)
T 3huh_A           77 ---------------------------------------------PKASRPTPGSADLCFITSTPINDVVSEI----LQA  107 (152)
T ss_dssp             ---------------------------------------------SCCSSCCTTCCEEEEEESSCHHHHHHHH----HHT
T ss_pred             ---------------------------------------------CcCcCCCCCccEEEEEecCCHHHHHHHH----HHC
Confidence                                                         000122347889999998 999999999    799


Q ss_pred             CCeeecCCcccCCCC--ceEEEEECCCCCEEEEEechhh
Q 027676          177 GGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       177 G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      |+++..+|...+++.  .+.+||+|||||.|||++...-
T Consensus       108 G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A          108 GISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             TCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             CCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            999988775544322  3889999999999999997543

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.78  E-value=4.3e-18  Score=129.39  Aligned_cols=132  Identities=18%  Similarity=0.224  Sum_probs=89.0

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCC--CceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE--QSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +.+++|+.|.|+|+++|++||+++|||++..+...++..+..+++..++.  ..+..|+|..........          
T Consensus         7 ~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~----------   76 (148)
T 1jc4_A            7 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTV----------   76 (148)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHH----------
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChH----------
Confidence            47999999999999999999999999999876543433445566654321  011344443221100000          


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCc-ccccC--CceeeEEEEeCCHHHHHHHHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-EYTKG--NAYAQVAISTDDVYKSAEVVNLVTQE  175 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~-~~~~~--~g~~Hiaf~v~Dv~a~~~~l~~~~~~  175 (220)
                                                                  .. ....+  .|+.|+||.|+|+++++++|    ++
T Consensus        77 --------------------------------------------~~~~~~~~~~~g~~h~~~~v~d~~~~~~~l----~~  108 (148)
T 1jc4_A           77 --------------------------------------------AKWLAKHNGRAGLHHMAWRVDDIDAVSATL----RE  108 (148)
T ss_dssp             --------------------------------------------HHHHHHTTTCCEEEEEEEECSCHHHHHHHH----HH
T ss_pred             --------------------------------------------HHHHHhCCCCCceEEEEEECCCHHHHHHHH----HH
Confidence                                                        00 00123  57889999999999999999    78


Q ss_pred             cCCeee-cCCcccCCCCceEEEE--ECCCCCEEEEEech
Q 027676          176 LGGKIT-RQPGSIPGLNTKITSF--VDPDGWKTVLVDNE  211 (220)
Q Consensus       176 ~G~~i~-~~p~~~~~~~~~~~~~--~DPdG~~iElv~~~  211 (220)
                      +|+++. .+|...+. +.+.+|+  +|||||.|||++..
T Consensus       109 ~G~~~~~~~p~~~~~-g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A          109 RGVQLLYDEPKLGTG-GNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             HTCCBSCSSCEECSS-SCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCeecCcCcccCCC-ceEEEEEeecCCCcEEEEEEecC
Confidence            999988 44554223 2366777  99999999999863

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.77  E-value=1.2e-17  Score=127.71  Aligned_cols=114  Identities=14%  Similarity=0.217  Sum_probs=82.3

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      .+.+++|+.|.|+|+++|++||+++|||++..+..  ++.  .+++..+.  .+..++|...                  
T Consensus        25 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~--~~~~~~~~--~~~~l~l~~~------------------   80 (141)
T 3ghj_A           25 NIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARR--WNFLWVSG--RAGMVVLQEE------------------   80 (141)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTT--EEEEEETT--TTEEEEEEEC------------------
T ss_pred             eeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCc--EEEEEecC--CCcEEEEecc------------------
Confidence            45789999999999999999999999999987642  222  33443321  2334444321                  


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHHHHHHHcC
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELG  177 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G  177 (220)
                                                                     ....+..|++|.|+  |+++++++|    +++|
T Consensus        81 -----------------------------------------------~~~~~~~h~~~~v~~~dld~~~~~l----~~~G  109 (141)
T 3ghj_A           81 -----------------------------------------------KENWQQQHFSFRVEKSEIEPLKKAL----ESKG  109 (141)
T ss_dssp             -----------------------------------------------CSSCCCCEEEEEECGGGHHHHHHHH----HHTT
T ss_pred             -----------------------------------------------CCCCCCceEEEEEeHHHHHHHHHHH----HHCC
Confidence                                                           11225679999997  999999999    7999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      +++..++. .+.+..+.+||+|||||.|||++
T Consensus       110 ~~~~~~~~-~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A          110 VSVHGPVN-QEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CCCEEEEE-EGGGTEEEEEEECTTCCEEEEEE
T ss_pred             CeEeCCcc-cCCCCceEEEEECCCCCEEEEEE
Confidence            99884333 22333588999999999999986

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.76  E-value=8.3e-18  Score=126.73  Aligned_cols=116  Identities=12%  Similarity=0.047  Sum_probs=83.2

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      .+.+++|+.|.|+|+++|++||+++|||++.....    .+  +.+..+   ++..+.|....  .              
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~---~~~~l~l~~~~--~--------------   64 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RY--VAFPSS---GDALFAIWSGG--E--------------   64 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SE--EEEECS---TTCEEEEESSS--C--------------
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CE--EEEEcC---CCcEEEEEeCC--C--------------
Confidence            45799999999999999999999999999866421    12  222211   12334443110  0              


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHH-
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQE-  175 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~-  175 (220)
                                                                 . ......+..|+||.|+|   ++++++++    ++ 
T Consensus        65 -------------------------------------------~-~~~~~~~~~~~~~~v~~~~dv~~~~~~l----~~~   96 (132)
T 3sk2_A           65 -------------------------------------------E-PVAEIPRFSEIGIMLPTGEDVDKLFNEW----TKQ   96 (132)
T ss_dssp             -------------------------------------------C-CCTTSCCCEEEEEEESSHHHHHHHHHHH----HHC
T ss_pred             -------------------------------------------C-CcCCCCCcceEEEEeCCHHHHHHHHHHH----Hhh
Confidence                                                       0 01122367899999987   88888887    78 


Q ss_pred             --cCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          176 --LGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       176 --~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                        +|+++..+|...+.+  +.+||+|||||.|||+++
T Consensus        97 ~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           97 KSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             hcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence              999999888766554  889999999999999985

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.75  E-value=1.3e-16  Score=141.19  Aligned_cols=180  Identities=22%  Similarity=0.228  Sum_probs=112.5

Q ss_pred             cccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCC--------------------------
Q 027676           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE--------------------------   70 (220)
Q Consensus        17 ~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--------------------------   70 (220)
                      |..++++++|+.|.|+|+++|++||+++|||+++.+..      ..+|+..+.+                          
T Consensus        11 P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~~~gl~~~a~~v~s~   84 (365)
T 4ghg_A           11 PAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGPVAALKAMAFRVRTP   84 (365)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECSSCEEEEEEEEESSH
T ss_pred             CCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCCCCCcceEEEEeCCH
Confidence            45577899999999999999999999999999987632      1222322111                          


Q ss_pred             ------------------------------------CceeEEEEEeecCCc----------ccCCCCceeEEEEEeCc--
Q 027676           71 ------------------------------------QSHFVVELTYNYGVT----------SYDIGTGFGHFAIATED--  102 (220)
Q Consensus        71 ------------------------------------~~~~~lel~~~~~~~----------~~~~g~~~~~~~~~~~~--  102 (220)
                                                          +++..+||.......          ......++.|+.+.++|  
T Consensus        85 ~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L~v~D~~  164 (365)
T 4ghg_A           85 EDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVP  164 (365)
T ss_dssp             HHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEEEESCHH
T ss_pred             HHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEEeecCHH
Confidence                                                122233443211000          00111456677777766  


Q ss_pred             -------cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHH
Q 027676          103 -------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQE  175 (220)
Q Consensus       103 -------~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~  175 (220)
                             .+|+++......+......+++.+...  ++.+-+.       ...+.+++|+||.|+|+++..+ ..+++++
T Consensus       165 ~t~~Fy~~LGf~~sd~~~~~~g~~~~~f~~~~~~--hH~la~~-------~~~~~~lhHvaf~v~d~d~v~~-~~d~l~~  234 (365)
T 4ghg_A          165 RGRKYLEDLGFRVTEDIQDDEGTTYAAWMHRKGT--VHDTALT-------GGNGPRLHHVAFSTHEKHNIIQ-ICDKMGA  234 (365)
T ss_dssp             HHHHHHHHTTCEEEEEEECTTSCEEEEEEESSSS--SCSEEEE-------ESSBSEEEEEEEECSSHHHHHH-HHHHHHH
T ss_pred             HHHHHHHhcCCEEEEEEecCCCceeEEeeecCCc--ccceeee-------cCCCCceeEEEEecCCHHHHHH-HHHHHHh
Confidence                   357776666555555555566665432  3332222       1233589999999999765544 4455578


Q ss_pred             cCCe--eecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          176 LGGK--ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       176 ~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +|+.  +...|+....+...++||+||+||.||+.....
T Consensus       235 ~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~  273 (365)
T 4ghg_A          235 LRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDY  273 (365)
T ss_dssp             TTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             CCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCc
Confidence            8874  556776643334478999999999999987654

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.75  E-value=1e-17  Score=130.75  Aligned_cols=132  Identities=14%  Similarity=0.149  Sum_probs=88.1

Q ss_pred             cccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEE
Q 027676           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (220)
Q Consensus        17 ~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~   96 (220)
                      +++.+.+++|++|.|+|+++|++||+++|||++..+..  .   ..+++..+    ...+.+...........+      
T Consensus         2 ~m~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~---~~~~~~~g----~~~~~l~~~~~~~~~~~~------   66 (160)
T 3r4q_A            2 VMKPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP--G---QLVFFKCG----RQMLLLFDPQESSRADAN------   66 (160)
T ss_dssp             --CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET--T---TEEEEEET----TEEEEEECHHHHTCCCTT------
T ss_pred             CccccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC--C---cEEEEeCC----CEEEEEEecCCccCcccc------
Confidence            34567899999999999999999999999999987642  1   23444432    123333221100000000      


Q ss_pred             EEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEe---CCHHHHHHHHHHHH
Q 027676           97 AIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST---DDVYKSAEVVNLVT  173 (220)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v---~Dv~a~~~~l~~~~  173 (220)
                                                                   ...+...+.|+.|+||.|   +|+++++++|    
T Consensus        67 ---------------------------------------------~~~~~~~~~g~~hi~f~V~~~~dld~~~~~l----   97 (160)
T 3r4q_A           67 ---------------------------------------------NPIPRHGAVGQGHFCFYADDKAEVDEWKTRF----   97 (160)
T ss_dssp             ---------------------------------------------CCSCCCEEEEECEEEEEESSHHHHHHHHHHH----
T ss_pred             ---------------------------------------------CCCCcCCCcceeEEEEEeCCHHHHHHHHHHH----
Confidence                                                         000011234778999999   8888888888    


Q ss_pred             HHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhhh
Q 027676          174 QELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  214 (220)
Q Consensus       174 ~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~~  214 (220)
                      +++|+++..++.. ++ +.+.+||+|||||.|||+++..+.
T Consensus        98 ~~~G~~~~~~~~~-~~-g~~~~~~~DPdG~~iel~~~~~~~  136 (160)
T 3r4q_A           98 EALEIPVEHYHRW-PN-GSYSVYIRDPAGNSVEVGEGKLWG  136 (160)
T ss_dssp             HTTTCCCCEEEEC-TT-SCEEEEEECTTCCEEEEEEGGGGT
T ss_pred             HHCCCEEeccccc-cC-CcEEEEEECCCCCEEEEEeCCCCC
Confidence            7999998765543 22 358899999999999999987664

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.75  E-value=2.6e-17  Score=122.56  Aligned_cols=117  Identities=15%  Similarity=0.160  Sum_probs=82.5

Q ss_pred             CcceeeeEEEEE--CCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           20 DKRRFLHAVYRV--GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        20 ~~~~l~Hi~l~V--~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      .+.+++|++|.|  +|++++++||+++|||++..+.....+ ....|+..+    ...++|...                
T Consensus         7 ~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~----~~~l~l~~~----------------   65 (126)
T 2qqz_A            7 YIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCG----NQEIHIGVE----------------   65 (126)
T ss_dssp             CEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEET----TEEEEEEEC----------------
T ss_pred             ccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeC----CEEEEEEec----------------
Confidence            357899999999  899999999999999998764321100 011333321    112222210                


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcC
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELG  177 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G  177 (220)
                                                                 .    .....+..|+||.|+|+++++++|    +++|
T Consensus        66 -------------------------------------------~----~~~~~~~~~~~f~v~d~~~~~~~l----~~~G   94 (126)
T 2qqz_A           66 -------------------------------------------Q----NFNPAKRAHPAFYVLKIDEFKQEL----IKQG   94 (126)
T ss_dssp             -------------------------------------------T----TCCCCSSSCEEEEETTHHHHHHHH----HHTT
T ss_pred             -------------------------------------------C----CCCCCCceEEEEEcCCHHHHHHHH----HHcC
Confidence                                                       0    001236789999999999999999    7999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +++..++. .+  +.+.+||+|||||.|||+++.
T Consensus        95 ~~~~~~~~-~~--g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           95 IEVIDDHA-RP--DVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             CCCEEECS-ST--TEEEEEEECTTSCEEEEEEEC
T ss_pred             CCccCCCC-CC--CeeEEEEECCCCCEEEEEeCC
Confidence            99987773 22  258899999999999999864

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.74  E-value=2.6e-17  Score=126.49  Aligned_cols=127  Identities=19%  Similarity=0.189  Sum_probs=86.6

Q ss_pred             eeccccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCce
Q 027676           14 LEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGF   93 (220)
Q Consensus        14 ~~~~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~   93 (220)
                      +.++.+.+.+++|+.|.|+|+++|++||+++|||++....   ++   ..++..+.    ..+.|........       
T Consensus        18 ~~m~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~---~~~l~~g~----~~l~l~~~~~~~~-------   80 (147)
T 3zw5_A           18 LYFQSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---ED---RKALCFGD----QKFNLHEVGKEFE-------   80 (147)
T ss_dssp             HHHHHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---TT---EEEEEETT----EEEEEEETTSCCS-------
T ss_pred             eeecceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---CC---ceEEEECC----cEEEEEEcCCCcC-------
Confidence            3456667889999999999999999999999999998542   11   23333321    1333321100000       


Q ss_pred             eEEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC-CHHHHHHHHHHH
Q 027676           94 GHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD-DVYKSAEVVNLV  172 (220)
Q Consensus        94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~-Dv~a~~~~l~~~  172 (220)
                                                                       +.......|..|++|.+. |+++++++|   
T Consensus        81 -------------------------------------------------~~~~~~~~g~~~~~~~~~~dl~~~~~~l---  108 (147)
T 3zw5_A           81 -------------------------------------------------PKAAHPVPGSLDICLITEVPLEEMIQHL---  108 (147)
T ss_dssp             -------------------------------------------------SCCSSCCTTCCEEEEECSSCHHHHHHHH---
T ss_pred             -------------------------------------------------cccCCCCCCCceEEEEeccCHHHHHHHH---
Confidence                                                             000112336789999996 999999999   


Q ss_pred             HHHcCCeeecCCcccCCC--CceEEEEECCCCCEEEEEec
Q 027676          173 TQELGGKITRQPGSIPGL--NTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       173 ~~~~G~~i~~~p~~~~~~--~~~~~~~~DPdG~~iElv~~  210 (220)
                       +++|+++..+|...++.  ..+.+||+|||||.|||+++
T Consensus       109 -~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A          109 -KACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             -HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             -HHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence             79999988766543222  23689999999999999874

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.74  E-value=2.8e-17  Score=124.71  Aligned_cols=125  Identities=18%  Similarity=0.342  Sum_probs=83.3

Q ss_pred             ccccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeE
Q 027676           16 WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (220)
Q Consensus        16 ~~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~   95 (220)
                      |+.+ .....|++|.|+|+++|++||+++|||++..+... .+.+..++++.+  ..+..+++....             
T Consensus         5 ~~~m-~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~--~~~~~l~l~~~~-------------   67 (139)
T 1twu_A            5 FSSF-QAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLP--HADYHLEFTQYE-------------   67 (139)
T ss_dssp             CSSC-BCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESS--SSSEEEEEEEET-------------
T ss_pred             CCCC-CcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecC--CCceEEEEeecC-------------
Confidence            5542 24668889999999999999999999998765432 223455666542  122234443211             


Q ss_pred             EEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCH---HHHHHHHHHH
Q 027676           96 FAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV---YKSAEVVNLV  172 (220)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv---~a~~~~l~~~  172 (220)
                                                                    +..+...+.++.|+||.|+|+   ++++++|   
T Consensus        68 ----------------------------------------------~~~~~~~~~~~~hi~~~v~d~~~l~~~~~~l---   98 (139)
T 1twu_A           68 ----------------------------------------------GGSTAPVPHPDSLLVFYVPNAVELAAITSKL---   98 (139)
T ss_dssp             ----------------------------------------------TCCCCCCCCTTCEEEEECCCHHHHHHHHHHH---
T ss_pred             ----------------------------------------------CCCCCCCCCCccEEEEEeCCcchHHHHHHHH---
Confidence                                                          111122344678999999999   8888888   


Q ss_pred             HHHcCCeeecC--CcccCCCCceEEEEECCCCCEEEEEech
Q 027676          173 TQELGGKITRQ--PGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       173 ~~~~G~~i~~~--p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                       +++|+++..+  +.....   . .||+|||||.|||+++.
T Consensus        99 -~~~G~~~~~~~~~~~~~~---g-~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           99 -KHMGYQEVESENPYWSNG---G-VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             -HHTTCCEECCSSHHHHSS---E-EEEECTTCCEEEEESSC
T ss_pred             -HHcCCcCcCCCCcccCCC---C-eEEECCCCCEEEEEEcC
Confidence             7999998743  322112   2 37999999999999864

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.74  E-value=1.7e-17  Score=122.04  Aligned_cols=115  Identities=17%  Similarity=0.141  Sum_probs=81.2

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      |.+.++ |+.|.|+|+++|++||+++|||++..+   + + + ..++..+. ..+..+.+...                 
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~---~-~-~-~~~~~~~~-~~~~~l~l~~~-----------------   58 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMD---H-G-W-IVTHASPL-EAHAQVSFARE-----------------   58 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEE---C-S-S-EEEEEEEE-EEEEEEEEESS-----------------
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEec---C-C-E-EEEEecCC-CCcEEEEEEcC-----------------
Confidence            345677 999999999999999999999998764   1 1 1 11222110 01122222110                 


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                                                     .....+..|++|.|+|++++++++    +++|+
T Consensus        59 -----------------------------------------------~~~~~~~~~~~~~v~d~~~~~~~l----~~~G~   87 (119)
T 2pjs_A           59 -----------------------------------------------GGSGTDVPDLSIEVDNFDEVHARI----LKAGL   87 (119)
T ss_dssp             -----------------------------------------------SBTTBCCCSEEEEESCHHHHHHHH----HHTTC
T ss_pred             -----------------------------------------------CCCCCceeEEEEEECCHHHHHHHH----HHCCC
Confidence                                                           001224679999999999999999    79999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ++..+|...+.+ .+.+||+|||||.|||+++
T Consensus        88 ~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           88 PIEYGPVTEAWG-VQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             CCSEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             ccccCCccCCCc-cEEEEEECCCCCEEEEEec
Confidence            998887765543 4889999999999999986

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.74  E-value=1.9e-17  Score=127.72  Aligned_cols=119  Identities=20%  Similarity=0.266  Sum_probs=84.2

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +.+.++. +.|.|+|+++|++||+++|||++..+...++..+...+++  .      +++....                
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~--~------~~l~~~~----------------   57 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS--T------ILLIAGS----------------   57 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET--T------EEEEESC----------------
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec--c------EEEecCC----------------
Confidence            3445666 9999999999999999999999876643333323322221  0      1121100                


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                                                   .......+..|++|.|+|+++++++|    +++|+
T Consensus        58 ---------------------------------------------~~~~~~~~~~hl~f~V~d~d~~~~~l----~~~G~   88 (144)
T 3r6a_A           58 ---------------------------------------------EEALKPFRNTQATFLVDSLDKFKTFL----EENGA   88 (144)
T ss_dssp             ---------------------------------------------HHHHGGGGGCCEEEEESCHHHHHHHH----HHTTC
T ss_pred             ---------------------------------------------cccCCCCcceEEEEEeCCHHHHHHHH----HHcCC
Confidence                                                         00011124579999999999999999    79999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      ++..+|...+.+  +.+||+|||||.|||+++..-
T Consensus        89 ~v~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           89 EIIRGPSKVPTG--RNMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             EEEEEEEEETTE--EEEEEECTTSCEEEEEEECC-
T ss_pred             EEecCCccCCCc--eEEEEECCCCCEEEEEEcCCc
Confidence            999888776654  789999999999999997653

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.74  E-value=3.3e-17  Score=120.66  Aligned_cols=115  Identities=15%  Similarity=0.053  Sum_probs=80.1

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +++++|+.|.|+|+++|++||+++|||++....  +  .  .+++..+.    ..+.+.... ..               
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~--~--~--~~~~~~~~----~~l~l~~~~-~~---------------   56 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAN--D--G--FAQFTIGS----HCLMLSQNH-LV---------------   56 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEE--T--T--EEEEEETT----EEEEEESSC-SS---------------
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeC--C--C--EEEEEeCC----eEEEEEcCC-CC---------------
Confidence            578999999999999999999999999886532  1  1  23333321    112121000 00               


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  180 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i  180 (220)
                                                                + ....+.+ .|++|.|+|+++++++|    +++|+++
T Consensus        57 ------------------------------------------~-~~~~~~~-~~~~~~v~d~~~~~~~l----~~~G~~~   88 (118)
T 2i7r_A           57 ------------------------------------------P-LENFQSG-IIIHIEVEDVDQNYKRL----NELGIKV   88 (118)
T ss_dssp             ------------------------------------------S-CCCCCSC-EEEEEECSCHHHHHHHH----HHHTCCE
T ss_pred             ------------------------------------------C-cccCCCe-EEEEEEECCHHHHHHHH----HHCCCce
Confidence                                                      0 0011224 38999999999999999    7899999


Q ss_pred             ecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          181 TRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       181 ~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ..+|...+.+ .+.+||+|||||.|||++.
T Consensus        89 ~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           89 LHGPTVTDWG-TESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             EEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             ecCCccccCc-cEEEEEECCCccEEEEEec
Confidence            8888765543 4789999999999999974

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.73  E-value=1.5e-16  Score=119.70  Aligned_cols=120  Identities=16%  Similarity=0.088  Sum_probs=81.6

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      ..++++|++|.|+|+++|++||+++|||++..+..      ...++..+  +..  +.|......               
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~--g~~--~~l~~~~~~---------------   60 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFF--GDQ--LVCHLSDRW---------------   60 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEET--TEE--EEEEECSCS---------------
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEe--CCE--EEEEEcCcc---------------
Confidence            45789999999999999999999999999966431      12233221  111  222110000               


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHc
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQEL  176 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~  176 (220)
                                                                 ..+  ...+..|+||.+.+   +++++++|    +++
T Consensus        61 -------------------------------------------~~~--~~~~~~h~~~~~~~~~d~~~~~~~l----~~~   91 (135)
T 3rri_A           61 -------------------------------------------DRE--VSMYPRHFGITFRDKKHFDNLYKLA----KQR   91 (135)
T ss_dssp             -------------------------------------------CSS--CCSSSCEEEEECSSHHHHHHHHHHH----HHT
T ss_pred             -------------------------------------------ccc--CCCCCCeEEEEEcChHhHHHHHHHH----HHc
Confidence                                                       000  12356799999965   77777777    899


Q ss_pred             CCeeecCCcccC---CCCceEEEEECCCCCEEEEEechhh
Q 027676          177 GGKITRQPGSIP---GLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       177 G~~i~~~p~~~~---~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      |+++..+|...+   .+..+.+||+|||||.|||++..+-
T Consensus        92 G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           92 GIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             TCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             CCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence            999987775431   1234789999999999999998665

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.73  E-value=4.2e-17  Score=126.15  Aligned_cols=120  Identities=11%  Similarity=0.077  Sum_probs=80.9

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.+++|+.|.|+|+++|++||+++|||++..+.  +    ..+++..+   .+..+.|........              
T Consensus         4 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~--~----~~~~~~~~---~g~~l~l~~~~~~~~--------------   60 (148)
T 3rhe_A            4 LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESS--P----TFAMFVMK---TGLRLGLWAQEEIEP--------------   60 (148)
T ss_dssp             ---CEEEEEEESCHHHHHHHHHHHHTCCCSEEC--S----SEEEEECT---TSCEEEEEEGGGCSS--------------
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHcCCEEeccC--C----CEEEEEcC---CCcEEEEecCCcCCc--------------
Confidence            468999999999999999999999999987652  1    12333321   123344432111000              


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G  177 (220)
                                                                  ......+..|++|.|+|   +++++++|    +++|
T Consensus        61 --------------------------------------------~~~~~~~~~~l~f~v~d~~dvd~~~~~l----~~~G   92 (148)
T 3rhe_A           61 --------------------------------------------KAHQTGGGMELSFQVNSNEMVDEIHRQW----SDKE   92 (148)
T ss_dssp             --------------------------------------------CCC----CEEEEEECSCHHHHHHHHHHH----HHTT
T ss_pred             --------------------------------------------cccCCCCeEEEEEEcCCHHHHHHHHHHH----HhCC
Confidence                                                        00112356789999988   77777777    7999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      +++..+|...+.+  +.+||+|||||.|||++...-
T Consensus        93 ~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           93 ISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             CCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC--
T ss_pred             CEEEeCCeecCCC--cEEEEECCCCCEEEEEEcChh
Confidence            9999888776663  889999999999999997544

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.72  E-value=2.1e-16  Score=119.44  Aligned_cols=121  Identities=18%  Similarity=0.149  Sum_probs=83.8

Q ss_pred             eeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCcc
Q 027676           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDA  103 (220)
Q Consensus        24 l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~  103 (220)
                      ...+.|.|+|+++|++||+++|||++..+...+ +....+.+..+    ...+.|.......    +             
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~----~-------------   60 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPY----T-------------   60 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCS----S-------------
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCc----C-------------
Confidence            357899999999999999999999998765433 33333444322    1223332111000    0             


Q ss_pred             ccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       104 ~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                                                             . ....+.+..|++|.|+|+++++++|    +++|+++..+
T Consensus        61 ---------------------------------------~-~~~~~~~~~~~~~~v~dv~~~~~~l----~~~G~~~~~~   96 (137)
T 3itw_A           61 ---------------------------------------V-SCAGGHTCKQVIVWVSDVDEHFMRS----TAAGADIVQP   96 (137)
T ss_dssp             ---------------------------------------C-EECCCCCCCEEEEEESCHHHHHHHH----HHTTCEEEEE
T ss_pred             ---------------------------------------c-cCCCCCcEEEEEEEeCCHHHHHHHH----HHcCCeeccC
Confidence                                                   0 0011223349999999999999999    7999999988


Q ss_pred             CcccCCCCceEEEEECCCCCEEEEEech
Q 027676          184 PGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       184 p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      |...+.+ .+.++|+|||||.|||+++.
T Consensus        97 ~~~~~~g-~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           97 LQDKPWG-LRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             EEEETTT-EEEEEEECSSSCEEEEEECC
T ss_pred             ccccCCC-cEEEEEECCCCCEEEEEEEc
Confidence            8766543 48899999999999999974

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.72  E-value=2e-16  Score=118.01  Aligned_cols=111  Identities=13%  Similarity=0.044  Sum_probs=81.1

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .+..|+.|.|+|+++|++||+++|||++..+.   . .  ..++..+    +..+.|....+                  
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~--~~~~~~~----~~~l~l~~~~~------------------   55 (124)
T 1xrk_A            4 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE---D-D--FAGVVRD----DVTLFISAVQD------------------   55 (124)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC---S-S--EEEEEET----TEEEEEEECSC------------------
T ss_pred             ccceeEEEEcCCHHHHHHHHHHccCceEEecC---C-C--EEEEEEC----CEEEEEEcCCC------------------
Confidence            56789999999999999999999999997651   1 1  2333321    12233321100                  


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHc-----
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL-----  176 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~-----  176 (220)
                                                                   ....+..|++|.|+|++++++++    +++     
T Consensus        56 ---------------------------------------------~~~~~~~~~~~~v~dv~~~~~~l----~~~~~~~~   86 (124)
T 1xrk_A           56 ---------------------------------------------QVVPDNTQAWVWVRGLDELYAEW----SEVVSTNF   86 (124)
T ss_dssp             ---------------------------------------------TTTGGGCEEEEEEECHHHHHHHH----TTTSBSCT
T ss_pred             ---------------------------------------------CCCCCceEEEEEECCHHHHHHHH----HHhccccc
Confidence                                                         00113468999999999999999    688     


Q ss_pred             -CC--eeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          177 -GG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       177 -G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                       |+  ++..+|...+.+  +.++|+|||||.|||++..
T Consensus        87 ~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           87 RDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             TTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC-
T ss_pred             CCccccccCCceecCCC--CEEEEECCCCCEEEEEEec
Confidence             99  888888776653  8899999999999999864

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.72  E-value=1.2e-16  Score=119.76  Aligned_cols=57  Identities=19%  Similarity=0.293  Sum_probs=47.7

Q ss_pred             CceeeEEEEeC--CHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          150 NAYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       150 ~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .+..|+||.|+  |++++++++    +++|+++..+|...++ ..+.+||+|||||.|||++..
T Consensus        65 ~~~~h~~~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           65 RTYNHIAFQIQSEEVDEYTERI----KALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHH----HHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSS
T ss_pred             CCeeEEEEEcCHHHHHHHHHHH----HHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCC
Confidence            47789999994  999999999    7999999888765433 247899999999999999864

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.72  E-value=2.8e-16  Score=119.44  Aligned_cols=116  Identities=24%  Similarity=0.349  Sum_probs=83.1

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.+++|++|.|+|+++|++||+++|||++..+..  .    ..++..+    +..+.|......                
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~----~~~l~l~~~~~~----------------   55 (141)
T 1npb_A            2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCG----DLWVCLSYDEAR----------------   55 (141)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEET----TEEEEEEECTTC----------------
T ss_pred             CceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEEC----CEEEEEEECCCC----------------
Confidence            3689999999999999999999999999977532  1    2344432    122334321100                


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHHHHHHHcCC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELGG  178 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~  178 (220)
                                                                ........+..|++|.|+  |+++++++|    +++|+
T Consensus        56 ------------------------------------------~~~~~~~~~~~hi~~~v~~~d~~~~~~~l----~~~G~   89 (141)
T 1npb_A           56 ------------------------------------------QYVPPQESDYTHYAFTVAEEDFEPLSQRL----EQAGV   89 (141)
T ss_dssp             ------------------------------------------CCCCGGGSCSCEEEEECCHHHHHHHHHHH----HHTTC
T ss_pred             ------------------------------------------CCCCCCCCCceEEEEEeCHHHHHHHHHHH----HHCCC
Confidence                                                      000112347789999996  888888888    79999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++..++..    ..+.+||+|||||.|||++...
T Consensus        90 ~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           90 TIWKQNKS----EGASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             CEEECCCS----SSEEEEEECTTCCEEEEEECCH
T ss_pred             eEeccCCC----ceeEEEEECCCCCEEEEEECch
Confidence            99877643    2478999999999999999753

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.72  E-value=6.4e-17  Score=124.33  Aligned_cols=118  Identities=13%  Similarity=0.155  Sum_probs=83.2

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.++.|+.|.|+|++++++||+++|||++..+.  +  .+  +++..++   +..|.|........              
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~~--~~~~~~~---~~~l~l~~~~~~~~--------------   79 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESS--P--TF--SLFVLAN---GMKLGLWSRHTVEP--------------   79 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--TE--EEEECTT---SCEEEEEETTSCSS--------------
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--Ce--EEEEcCC---CcEEEEEeCCCCCC--------------
Confidence            458999999999999999999999999987653  1  12  2333221   23344432110000              


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~G  177 (220)
                                                                  ....+.+..|++|.|+|   +++++++|    +++|
T Consensus        80 --------------------------------------------~~~~~~~~~hl~f~v~d~~dv~~~~~~l----~~~G  111 (144)
T 2kjz_A           80 --------------------------------------------KASVTGGGGELAFRVENDAQVDETFAGW----KASG  111 (144)
T ss_dssp             --------------------------------------------CCCCSSSSCEEEEECSSHHHHHHHHHHH----HHTT
T ss_pred             --------------------------------------------ccCCCCCceEEEEEeCCHHHHHHHHHHH----HHCC
Confidence                                                        00123477899999985   67777777    7999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +++..+|...+.+  +.+||+|||||.|||+++.
T Consensus       112 ~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A          112 VAMLQQPAKMEFG--YTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             CCCCSCCEEETTE--EEEEECCTTCCEEEEEEEC
T ss_pred             CeEecCceecCCc--eEEEEECCCCCEEEEEecC
Confidence            9998888765543  7899999999999999864

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.72  E-value=9.9e-17  Score=121.66  Aligned_cols=116  Identities=22%  Similarity=0.319  Sum_probs=79.3

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeE---EEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN---AFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~---~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      .+++|+.|.|+|+++|++||+++|||++..+..  ...+..   .++..+    +..++|.                   
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~g----~~~l~l~-------------------   57 (139)
T 1r9c_A            3 EGLSHMTFIVRDLERMTRILEGVFDAREVYASD--TEQFSLSREKFFLIG----DIWVAIM-------------------   57 (139)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGG--GSTTCCSCEEEEEET----TEEEEEE-------------------
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCC--CccccccceEEEEEC----CEEEEEE-------------------
Confidence            689999999999999999999999999876532  111110   022211    1122221                   


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHHHHHHHc
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQEL  176 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~  176 (220)
                                                              ....    ....+..|+||.|+  |++++++++    +++
T Consensus        58 ----------------------------------------~~~~----~~~~~~~h~~~~v~~~d~~~~~~~l----~~~   89 (139)
T 1r9c_A           58 ----------------------------------------QGEK----LAERSYNHIAFKIDDADFDRYAERV----GKL   89 (139)
T ss_dssp             ----------------------------------------ECCC----CSSCCSCEEEEECCGGGHHHHHHHH----HHH
T ss_pred             ----------------------------------------eCCC----CCCCCeeEEEEEcCHHHHHHHHHHH----HHC
Confidence                                                    1000    00346789999999  999999999    789


Q ss_pred             CCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          177 GGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       177 G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      |+++..+|...++ ..+.+||+|||||.|||++..
T Consensus        90 G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           90 GLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             TCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             CCcccCCcccCCC-CeEEEEEECCCCCEEEEEeCC
Confidence            9999877654433 347899999999999999853

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.71  E-value=3.2e-16  Score=118.27  Aligned_cols=113  Identities=23%  Similarity=0.305  Sum_probs=82.2

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.+++|+.|.|+|+++|++||+++|||++..+..  .    ..|+..+    +..+.|......                
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~----~~~l~l~~~~~~----------------   55 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELG----SLWLCLSREPQY----------------   55 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEET----TEEEEEEECTTC----------------
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecC----CEEEEEEeCCCC----------------
Confidence            3689999999999999999999999999986531  1    2344332    122333211000                


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHHHHHHHcCC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELGG  178 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~  178 (220)
                                                                   .....+..|++|.|+  |++++++++    +++|+
T Consensus        56 ---------------------------------------------~~~~~~~~h~~~~v~~~d~~~~~~~l----~~~G~   86 (135)
T 1nki_A           56 ---------------------------------------------GGPAADYTHYAFGIAAADFARFAAQL----RAHGV   86 (135)
T ss_dssp             ---------------------------------------------CCCCSSSCEEEEEECHHHHHHHHHHH----HHTTC
T ss_pred             ---------------------------------------------CCCCCCcceEEEEccHHHHHHHHHHH----HHCCC
Confidence                                                         012336789999998  888888888    79999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++..++..  +  ++.+||+|||||.|||++...
T Consensus        87 ~~~~~~~~--~--~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           87 REWKQNRS--E--GDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             CEEECCCS--S--SCEEEEECTTCCEEEEESCCH
T ss_pred             ceecCCCC--C--eEEEEEECCCCCEEEEEECCc
Confidence            99887653  2  378999999999999998654

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.71  E-value=1.5e-16  Score=119.96  Aligned_cols=117  Identities=15%  Similarity=0.200  Sum_probs=77.6

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .+++|+.|.|+|+++|++||++ |||++..+.. +.+.  .+++...   ++..+.|....+                  
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~--~~~~~~~---~~~~l~l~~~~~------------------   59 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGS--EVHRAVH---NGVEFSLYSIQN------------------   59 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------C--CEEEEEE---TTEEEEEEECCC------------------
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCC--EEEEEeC---CCeEEEEEECCC------------------
Confidence            5899999999999999999999 9999876421 1111  2222210   112233311000                  


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCe-e
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK-I  180 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~-i  180 (220)
                                                                 ......+..|++|.|+|++++++++    +++|++ +
T Consensus        60 -------------------------------------------~~~~~~~~~~l~f~v~dvd~~~~~l----~~~G~~~~   92 (128)
T 3g12_A           60 -------------------------------------------PQRSQIPSLQLGFQITDLEKTVQEL----VKIPGAMC   92 (128)
T ss_dssp             -------------------------------------------CSSCCCCSEEEEEEESCHHHHHHHH----TTSTTCEE
T ss_pred             -------------------------------------------CcCCCCCceEEEEEeCCHHHHHHHH----HHCCCcee
Confidence                                                       0011223467999999999999999    799999 8


Q ss_pred             ecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          181 TRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       181 ~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ..+|...+.+ .+ ++|+|||||.|||++...
T Consensus        93 ~~~p~~~~~G-~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           93 ILDPTDMPDG-KK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             EEEEEECC-C-EE-EEEECTTCCEEEEEC---
T ss_pred             ccCceeCCCc-cE-EEEECCCCCEEEEEEecc
Confidence            8777766553 34 999999999999999764

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.71  E-value=1.3e-16  Score=116.41  Aligned_cols=108  Identities=17%  Similarity=0.186  Sum_probs=77.1

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      ++++|+.|.|+|+++|++||+++|||++..+.   +.  ..+++..+   .+..+.|.....                  
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~--~~~~~~~~---~~~~l~l~~~~~------------------   55 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GN--AFAVMRDN---DGFILTLMKGKE------------------   55 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TT--TEEEEECT---TCCEEEEEECSS------------------
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CC--cEEEEEcC---CCcEEEEEeCCC------------------
Confidence            57999999999999999999999999987642   11  23444432   123333321100                  


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEe---CCHHHHHHHHHHHHHHcCC
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST---DDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v---~Dv~a~~~~l~~~~~~~G~  178 (220)
                                                                   ....+..|++|.|   +|+++++++|    +++|+
T Consensus        56 ---------------------------------------------~~~~~~~~~~~~v~~~~d~~~~~~~l----~~~G~   86 (113)
T 1xqa_A           56 ---------------------------------------------VQYPKTFHVGFPQESEEQVDKINQRL----KEDGF   86 (113)
T ss_dssp             ---------------------------------------------CCCCTTCCEEEECSSHHHHHHHHHHH----HHTTC
T ss_pred             ---------------------------------------------CCCCceeEEEEEcCCHHHHHHHHHHH----HHCCC
Confidence                                                         0013578999999   7888888888    79999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEE
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLV  208 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  208 (220)
                      ++.. |... +  .+.+||+|||||.|||+
T Consensus        87 ~~~~-p~~~-~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           87 LVEP-PKHA-H--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             CCCC-CEEC----CEEEEEEETTTEEEEEE
T ss_pred             EEec-CcCC-C--cEEEEEECCCCcEEEEe
Confidence            9754 5432 2  48899999999999997

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.71  E-value=2.4e-16  Score=119.16  Aligned_cols=121  Identities=12%  Similarity=0.162  Sum_probs=82.3

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .+..++.|.|+|+++|++||+++|||++..+..      ..+++..+    +..+.|....+..                
T Consensus         6 ~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~----~~~l~l~~~~~~~----------------   59 (134)
T 3fcd_A            6 IHQITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELS----GCGLRLLEEPARK----------------   59 (134)
T ss_dssp             CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEET----TEEEEEEECCCC-----------------
T ss_pred             hhcceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEEC----CEEEEEEeCCCCC----------------
Confidence            456678999999999999999999999987632      13444432    2344443221100                


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                                                 ....+.+..|++|.|+|++++++++.++-.+.|+++.
T Consensus        60 -------------------------------------------~~~~~~~~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~   96 (134)
T 3fcd_A           60 -------------------------------------------IIPDGIARVAICIDVSDIDSLHTKLSPALENLPADQV   96 (134)
T ss_dssp             ---------------------------------------------------EEEEEECSCHHHHHHHHHHHHTTSCGGGE
T ss_pred             -------------------------------------------cCCCCCceEEEEEEeCCHHHHHHHHHhcCCccCCccc
Confidence                                                       0011123368999999999999999543335666777


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      .+|...+. +.+.++|+|||||.|||.+...
T Consensus        97 ~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           97 EPLKNMPY-GQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             EEEEECTT-SEEEEEEECTTSCEEEEEEECC
T ss_pred             cCCcccCC-CcEEEEEECCCCCEEEEEEccc
Confidence            77776554 3478999999999999999754

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.71  E-value=4.4e-16  Score=119.79  Aligned_cols=122  Identities=16%  Similarity=0.187  Sum_probs=84.8

Q ss_pred             cCcceeeeEEEEECCHHHHHHHH---HHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFY---TECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY---~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~   95 (220)
                      +...+++|++|.|+|+++|++||   +++|||++..+..  .+   ..|+. +    ...++|....+...         
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~~---~~~~~-g----~~~l~l~~~~~~~~---------   76 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--RG---KSYKH-G----KTYLVFVQTEDRFQ---------   76 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--TE---EEEEE-T----TEEEEEEECCGGGS---------
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--CC---ceEec-C----CeEEEEEEcCCCcc---------
Confidence            45579999999999999999999   9999999987642  11   12433 2    23455542211000         


Q ss_pred             EEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccc-cCCceeeEEEEeC---CHHHHHHHHHH
Q 027676           96 FAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT-KGNAYAQVAISTD---DVYKSAEVVNL  171 (220)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~-~~~g~~Hiaf~v~---Dv~a~~~~l~~  171 (220)
                                                                     ..+.. ...|+.|+||.|+   |+++++++|  
T Consensus        77 -----------------------------------------------~~~~~~~~~g~~hi~f~v~~~~dv~~~~~~l--  107 (146)
T 3ct8_A           77 -----------------------------------------------TPTFHRKRTGLNHLAFHAASREKVDELTQKL--  107 (146)
T ss_dssp             -----------------------------------------------CSCCCTTSSSCCEEEEECSCHHHHHHHHHHH--
T ss_pred             -----------------------------------------------cccccccCCCceEEEEECCCHHHHHHHHHHH--
Confidence                                                           00011 1247789999999   888888888  


Q ss_pred             HHHHcCCeeec-CCcccCCC-CceEEEEECCCCCEEEEEec
Q 027676          172 VTQELGGKITR-QPGSIPGL-NTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       172 ~~~~~G~~i~~-~p~~~~~~-~~~~~~~~DPdG~~iElv~~  210 (220)
                        +++|+++.. +|.+.+.+ +.+.+||+|||||.|||+++
T Consensus       108 --~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A          108 --KERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             --HHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             --HHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence              799999987 46544332 34789999999999999864

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.70  E-value=2.1e-16  Score=120.14  Aligned_cols=55  Identities=15%  Similarity=0.123  Sum_probs=46.2

Q ss_pred             ceeeEEEEeCC---HHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~D---v~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +. |++|.|+|   +++++++|    +++|+++..+|...+. +.+.+||+|||||.|||++..
T Consensus        76 ~~-~~~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           76 KF-LLNFDVDTKEAVDKLVPVA----IAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             CE-EEEEECSCHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC
T ss_pred             eE-EEEEEcCCHHHHHHHHHHH----HHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEcc
Confidence            54 99999995   88888888    7999999888876554 358899999999999999864

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.69  E-value=6.2e-16  Score=119.40  Aligned_cols=122  Identities=18%  Similarity=0.238  Sum_probs=82.3

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .++.|+.|.|+|++++++||+++|||++...   ++..  .+++..+.  ..  ++|....       ..          
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~--~~~~~~~~--~~--~~l~~~~-------~~----------   77 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMD--YSMVTTGP--VG--ESGMPDE-------PG----------   77 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTT--EEEEECSC--BC--TTSSBCS-------SS----------
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCC--EEEEEeCC--cc--eeecccC-------Cc----------
Confidence            5899999999999999999999999998763   2222  23333221  10  1110000       00          


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                                    .....+...      ....+. |++|.|+|+++++++|    +++|+++.
T Consensus        78 ------------------------------~~~~~l~~~------~~~~g~-~l~f~v~dld~~~~~l----~~~G~~~~  116 (148)
T 2r6u_A           78 ------------------------------YINGGMMQR------GEVTTP-VVTVDVESIESALERI----ESLGGKTV  116 (148)
T ss_dssp             ------------------------------CBCEEEEES------SSSCSC-EEEEECSCHHHHHHHH----HHTTCEEE
T ss_pred             ------------------------------ccccceeec------CCCCeE-EEEEEcCCHHHHHHHH----HHcCCeEe
Confidence                                          000111100      011344 9999999999999999    79999999


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .+|...++. ++.+||+|||||.|||++..
T Consensus       117 ~~~~~~~~~-g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A          117 TGRTPVGNM-GFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             EEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             cCCeecCCC-EEEEEEECCCCCEEEEEecC
Confidence            888766632 38899999999999999864

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.69  E-value=2.7e-16  Score=120.75  Aligned_cols=59  Identities=22%  Similarity=0.136  Sum_probs=44.5

Q ss_pred             CCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          149 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       149 ~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +.+..|+||.|++. +.++.+.++++++|+++..+|...++  ++.+||+|||||.|||+..
T Consensus        75 ~~~~~~~a~~v~~~-~~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~~  133 (149)
T 4gym_A           75 ATTEAIVCVSAIDR-DDVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMWM  133 (149)
T ss_dssp             TCBSCEEEEECSSH-HHHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEEE
T ss_pred             CCCeeEEEEEeccH-HHHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEEE
Confidence            34567999999763 33333444448999999999887544  4889999999999999863

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.69  E-value=3.4e-16  Score=136.58  Aligned_cols=124  Identities=10%  Similarity=0.098  Sum_probs=88.4

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      ...+++|++|.|+|++++++||+++|||++..+.. +++....+|+..+.  .++.+.+...                  
T Consensus       150 ~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~--~~~~l~~~~~------------------  208 (339)
T 3lm4_A          150 PVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNL--LGHEVACMRD------------------  208 (339)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSS--SSCSEEEEEC------------------
T ss_pred             CcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCC--CceEEEEecc------------------
Confidence            56899999999999999999999999999987654 33333445554321  1111222110                  


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHHc
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQEL  176 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~~  176 (220)
                                                                   +.....++.|+||.|+|   +++++++|    +++
T Consensus       209 ---------------------------------------------~~~~~~~~~Hiaf~v~d~~~v~~~~~~l----~~~  239 (339)
T 3lm4_A          209 ---------------------------------------------MTGGHGKLHHLAFFYGTGQHNIDAVEMF----RDY  239 (339)
T ss_dssp             ---------------------------------------------TTSCCSEEEEEEEECCCHHHHHHHHHHH----HHT
T ss_pred             ---------------------------------------------CCCCCCceeEEEEEeCCHHHHHHHHHHH----HHC
Confidence                                                         01123468999999999   66677777    799


Q ss_pred             CCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          177 GGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       177 G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      |+++..+|.....+..+++||+|||||.||+++..++
T Consensus       240 G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~  276 (339)
T 3lm4_A          240 DIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAGY  276 (339)
T ss_dssp             TCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCCC
T ss_pred             CCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCCe
Confidence            9999888875433334789999999999999966544

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.69  E-value=9.5e-16  Score=131.38  Aligned_cols=124  Identities=10%  Similarity=0.074  Sum_probs=85.1

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCC-CceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ....+++|++|.|+|+++|++||+++|||++......+. +.....|+..+.  .++.+.+                   
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------------------  205 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSH--KVHDIAF-------------------  205 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSS--SSCSEEE-------------------
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCC--CceeEEE-------------------
Confidence            356899999999999999999999999999877654332 223344544321  1110111                   


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcC
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELG  177 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G  177 (220)
                                                              ..      .....+++|+||.|+|+++.. ++.++++++|
T Consensus       206 ----------------------------------------~~------~~~~~~~~Hiaf~v~d~~~v~-~~~~~l~~~G  238 (309)
T 3hpy_A          206 ----------------------------------------VE------YPEKGKLHHCSFLLESWEQVL-RAGDIMSMNE  238 (309)
T ss_dssp             ----------------------------------------EE------CSSTTEEEEEEEECSSHHHHH-HHHHHHHHTT
T ss_pred             ----------------------------------------ec------CCCCCceeEEEEECCCHHHHH-HHHHHHHHCC
Confidence                                                    00      011236899999999975432 2333448999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +++..+|...+.+..+++||+|||||.|||+..
T Consensus       239 ~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          239 VNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             CCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             CEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            999888876444445789999999999999987

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.69  E-value=1.3e-15  Score=113.72  Aligned_cols=114  Identities=19%  Similarity=0.245  Sum_probs=80.4

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      ....|+.|.|+|+++|++||++ |||++..+   + +  ...++..+    +..++|....+                  
T Consensus         2 ~~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~---~-~--~~~~~~~~----~~~l~l~~~~~------------------   52 (126)
T 1ecs_A            2 TDQATPNLPSRDFDSTAAFYER-LGFGIVFR---D-A--GWMILQRG----DLMLEFFAHPG------------------   52 (126)
T ss_dssp             CCEEEEEEEESCHHHHHHHHHT-TTCEEEEE---C-S--SEEEEEET----TEEEEEEECTT------------------
T ss_pred             CccEEEEEEeCCHHHHHHHHHH-CCCEEEec---C-C--CEEEEEeC----CEEEEEEeCCC------------------
Confidence            4567899999999999999998 99999765   1 1  12333332    12333321110                  


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee-
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI-  180 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i-  180 (220)
                                                                  .....+..|++|.|+|++++++++    +++|+++ 
T Consensus        53 --------------------------------------------~~~~~~~~~~~~~v~dv~~~~~~l----~~~G~~~~   84 (126)
T 1ecs_A           53 --------------------------------------------LDPLASWFSCCLRLDDLAEFYRQC----KSVGIQET   84 (126)
T ss_dssp             --------------------------------------------CCGGGCCCEEEEEESCHHHHHHHH----HHTTCCBC
T ss_pred             --------------------------------------------CCCCCcceEEEEEECCHHHHHHHH----HHCCCccc
Confidence                                                        001125679999999999999999    7899984 


Q ss_pred             ------ecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          181 ------TRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       181 ------~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                            ..+|...+.+ .+.++|+|||||.|||++....
T Consensus        85 ~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  122 (126)
T 1ecs_A           85 SSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNELL  122 (126)
T ss_dssp             SSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECCC-
T ss_pred             cccCccccCCcccCcc-cEEEEEECCCCCEEEEecchhh
Confidence                  6666655543 4789999999999999997653

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.68  E-value=2.9e-16  Score=120.82  Aligned_cols=123  Identities=20%  Similarity=0.252  Sum_probs=86.1

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .+++|+.|.|+|+++|++||+++|||++..+.    +  ..+++..+    +..+.|....+....              
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~--~~~~~~~~----~~~l~l~~~~~~~~~--------------   59 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----P--EIIFYQMN----GFVLATWLVQNLQED--------------   59 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----S--SEEEEECS----SSEEEEEEHHHHHHH--------------
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----C--CEEEEEcC----CEEEEEEeccccccc--------------
Confidence            68999999999999999999999999887642    1  13344321    233444321100000              


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEe---CCHHHHHHHHHHHHHHcCC
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST---DDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v---~Dv~a~~~~l~~~~~~~G~  178 (220)
                                                             .+ .+...+.+..|++|.|   +|+++++++|    +++|+
T Consensus        60 ---------------------------------------~~-~~~~~~~~~~~l~f~v~~~~dv~~~~~~l----~~~G~   95 (150)
T 3bqx_A           60 ---------------------------------------VG-VAVTSRPGSMALAHNVRAETEVAPLMERL----VAAGG   95 (150)
T ss_dssp             ---------------------------------------HS-SCCCSSCCSCEEEEECSSGGGHHHHHHHH----HHTTC
T ss_pred             ---------------------------------------cC-CCCCCCCCeEEEEEEeCCHHHHHHHHHHH----HHCCC
Confidence                                                   00 0001134678999999   8999999999    79999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      ++..+|...+.+ .+.+||+|||||.|||++...+
T Consensus        96 ~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  129 (150)
T 3bqx_A           96 QLLRPADAPPHG-GLRGYVADPDGHIWEIAFNPVW  129 (150)
T ss_dssp             EEEEEEECCTTS-SEEEEEECTTCCEEEEEECTTS
T ss_pred             EEecCCcccCCC-CEEEEEECCCCCEEEEEeCCCc
Confidence            998888765543 4889999999999999998655

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.68  E-value=5.8e-16  Score=115.12  Aligned_cols=109  Identities=13%  Similarity=0.043  Sum_probs=78.6

Q ss_pred             eeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCc
Q 027676           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (220)
Q Consensus        23 ~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~  102 (220)
                      +..|+.|.|+|+++|++||+++|||++..+   ++ .  ..++..+    +..+.|....+                   
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~---~~-~--~~~~~~~----~~~l~l~~~~~-------------------   55 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFG---DR-D--FAGVRRG----DIRLHISRTEH-------------------   55 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEE---CS-S--EEEEEET----TEEEEEEECSC-------------------
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeC---CC-C--EEEEEEC----CEEEEEEcCCC-------------------
Confidence            446899999999999999999999999764   11 1  2333321    12233321100                   


Q ss_pred             cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHc------
Q 027676          103 ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL------  176 (220)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~------  176 (220)
                                                               .+   ..+..|++|.|+|++++++++    +++      
T Consensus        56 -----------------------------------------~~---~~~~~~~~~~v~dvd~~~~~l----~~~~~~~~~   87 (122)
T 1qto_A           56 -----------------------------------------QI---VADNTSAWIEVTDPDALHEEW----ARAVSTDYA   87 (122)
T ss_dssp             -----------------------------------------HH---HHTTCEEEEEESCHHHHHHHH----TTTSCSCTT
T ss_pred             -----------------------------------------CC---CCCceEEEEEECCHHHHHHHH----Hhhcccccc
Confidence                                                     00   012368999999999999999    688      


Q ss_pred             CC--eeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          177 GG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       177 G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      |+  ++..+|...+.+  +.++|+|||||.|||+++
T Consensus        88 G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           88 DTSGPAMTPVGESPAG--REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             CTTSCEECCCEEETTE--EEEEEECTTSCEEEEEEC
T ss_pred             CccccccCCCcCCCCC--cEEEEECCCCCEEEEecC
Confidence            99  888888766553  789999999999999986

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.68  E-value=3.7e-16  Score=118.35  Aligned_cols=58  Identities=19%  Similarity=0.084  Sum_probs=49.4

Q ss_pred             CCceeeEEEEeC---CHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          149 GNAYAQVAISTD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       149 ~~g~~Hiaf~v~---Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +.+..|++|.|+   |+++++++|    +++|+++..+|...+.+ .+.+||+|||||.|||++..
T Consensus        69 ~~~~~~l~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           69 GGHRFAIAFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             SSCSEEEEEECSSHHHHHHHHHHH----HHTTCCEEEEEEEETTT-EEEEEEECTTCCEEEEEEEC
T ss_pred             CCCeEEEEEEeCCHHHHHHHHHHH----HHCCCceeeCCcccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            347789999999   898888888    79999998888765543 47899999999999999876

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.67  E-value=1.4e-15  Score=131.57  Aligned_cols=118  Identities=19%  Similarity=0.204  Sum_probs=83.8

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      ...+++|++|.|+|++++++|| ++|||++......+.+.....|+..+.  .++.+                       
T Consensus       149 ~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~--~~~~~-----------------------  202 (323)
T 1f1u_A          149 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQ--TVHDT-----------------------  202 (323)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSS--SSCSE-----------------------
T ss_pred             CCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCC--CcccE-----------------------
Confidence            4689999999999999999999 999999877654333333344443211  11111                       


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHH---HHHHHHHHHHHc
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK---SAEVVNLVTQEL  176 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a---~~~~l~~~~~~~  176 (220)
                                                          .+..       ..+.+++|+||.|+|+++   ++++|    +++
T Consensus       203 ------------------------------------~~~~-------~~~~~~~Hiaf~v~d~d~v~~~~~~l----~~~  235 (323)
T 1f1u_A          203 ------------------------------------ALTG-------GNGPRMHHVAFATHEKHNIIQICDKM----GAL  235 (323)
T ss_dssp             ------------------------------------EEEE-------SSBSEEEEEEEECSSHHHHHHHHHHH----HHT
T ss_pred             ------------------------------------EEeC-------CCCCCceEEEEECCCHHHHHHHHHHH----HHC
Confidence                                                1110       011278999999999988   77777    799


Q ss_pred             CC--eeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          177 GG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       177 G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      |+  ++..+|.....+..+++||+|||||.||++..
T Consensus       236 G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (323)
T 1f1u_A          236 RISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  271 (323)
T ss_dssp             TCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             CCccccccCCCccCCCCcEEEEEECCCCCEEEEEeC
Confidence            99  99876655433345789999999999999874

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.66  E-value=2e-15  Score=131.96  Aligned_cols=126  Identities=14%  Similarity=0.209  Sum_probs=85.0

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCC--CceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE--EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~   96 (220)
                      +.+.+++||+|.|+|++++++||+++|||+++.+....+  +.+.. +++......+..|++....+...          
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l-~~~~~~g~~g~~l~l~~~~~~~~----------   72 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHL-YFGNEGGKPGTIITFFPWAGARQ----------   72 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEE-EEESTTCCTTSEEEEEECTTCCB----------
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEE-EEecCCCCCCcEEEEEECCCCCC----------
Confidence            457899999999999999999999999999987643221  11212 22211111123344432111000          


Q ss_pred             EEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHHHHHH
Q 027676           97 AIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQ  174 (220)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~~~~~  174 (220)
                                                                      .....+++.|+||.|+  |+++++++|    +
T Consensus        73 ------------------------------------------------~~~~~~~~~hiaf~V~~~dl~~~~~rL----~  100 (335)
T 3oaj_A           73 ------------------------------------------------GVIGDGQVGVTSYVVPKGAMAFWEKRL----E  100 (335)
T ss_dssp             ------------------------------------------------CBCCBSEEEEEEEEECTTCHHHHHHHH----H
T ss_pred             ------------------------------------------------CCCCCCceEEEEEEecHHHHHHHHHHH----H
Confidence                                                            0112247889999999  899999988    7


Q ss_pred             HcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          175 ELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       175 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++|+++..  ...  .+.+.+||+|||||.|||++..
T Consensus       101 ~~Gv~~~~--~~~--~g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A          101 KFNVPYTK--IER--FGEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             HTTCCCEE--EEE--TTEEEEEEECTTSCEEEEEECS
T ss_pred             hCcceeee--ecc--CCcEEEEEECCCCCEEEEEEeC
Confidence            89999874  222  2348899999999999999975

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.65  E-value=2.4e-15  Score=128.47  Aligned_cols=123  Identities=17%  Similarity=0.218  Sum_probs=81.1

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +...+++|++|.|+|+++|++||+++|||++........+.....|+..+.  .+.                        
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~--~~~------------------------  199 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLST--KAH------------------------  199 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSS--BSC------------------------
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCC--Cce------------------------
Confidence            356899999999999999999999999999876542111101112322210  000                        


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQE  175 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~  175 (220)
                                                         .+.+..      .....++.|+||.|+|   +++++++|    ++
T Consensus       200 -----------------------------------~~~~~~------~~~~g~~~hi~f~v~d~~dv~~~~~~l----~~  234 (307)
T 1mpy_A          200 -----------------------------------DVAFIH------HPEKGRLHHVSFHLETWEDLLRAADLI----SM  234 (307)
T ss_dssp             -----------------------------------SEEEEE------CSSSSEEEEEEEECSCHHHHHHHHHHH----HH
T ss_pred             -----------------------------------eEEEec------CCCCCcceEEEEEcCCHHHHHHHHHHH----HH
Confidence                                               011110      0011237899999995   45555666    79


Q ss_pred             cCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          176 LGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       176 ~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +|+++..+|...+.+..+.+||+|||||.|||++...
T Consensus       235 ~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          235 TDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             HTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             CCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence            9999987776544333478999999999999999643

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.65  E-value=1.6e-15  Score=129.19  Aligned_cols=58  Identities=5%  Similarity=-0.004  Sum_probs=46.7

Q ss_pred             CceeeEEEEeCCHHH---HHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          150 NAYAQVAISTDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a---~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .++.|+||.|+|+++   ++++|    +++|+++..+|...+.+..+++||+|||||.|||++..
T Consensus       211 ~g~~h~af~v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          211 SGIVHLMVEVEQADDVGLCLDRA----LRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSEEEEEEEBSSHHHHHHHHHHH----HHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCceEEEEEeCCHHHHHHHHHHH----HHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            478899999999655   36666    89999998877654443357899999999999999854

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.65  E-value=2e-15  Score=129.32  Aligned_cols=120  Identities=20%  Similarity=0.181  Sum_probs=81.9

Q ss_pred             ccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        18 ~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ++.+.+++|+.|.|+|+++|++||+++|||++..+..  .+   ..++.......+..+.+..                 
T Consensus         3 m~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~---~~~l~~~~~~~~~~l~l~~-----------------   60 (309)
T 3hpy_A            3 MTGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG---RVYFKCWDERDHSCYIIRE-----------------   60 (309)
T ss_dssp             BCSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS---CEEEECTTCCBSCSEEEEE-----------------
T ss_pred             ccccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC---eEEEEeccCCCceEEEEEe-----------------
Confidence            4567899999999999999999999999999987631  11   1233210011111121110                 


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHH
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQ  174 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~  174 (220)
                                                                       ....++.|++|.|+|   +++++++|    +
T Consensus        61 -------------------------------------------------~~~~~~~h~a~~v~~~~dl~~~~~~l----~   87 (309)
T 3hpy_A           61 -------------------------------------------------ADTAGIDFFGFKVLDKATLEKLDADL----Q   87 (309)
T ss_dssp             -------------------------------------------------CSSCEEEEEEEEESCHHHHHHHHHHH----H
T ss_pred             -------------------------------------------------CCCCceeEEEEEECCHHHHHHHHHHH----H
Confidence                                                             112367899999998   66666666    7


Q ss_pred             HcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          175 ELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       175 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++|+++...+.....+..+.+||+|||||.|||++...
T Consensus        88 ~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           88 AYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             HHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             hCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence            99999887664311223478999999999999998654

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.64  E-value=8.9e-16  Score=116.19  Aligned_cols=57  Identities=14%  Similarity=0.131  Sum_probs=48.0

Q ss_pred             CCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          149 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       149 ~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +.+..|++|.|+|++++++++    ++ |+++..+|...+.+ .+.+||+|||||.|||++..
T Consensus        72 ~~~~~~~~~~v~dv~~~~~~l----~~-G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           72 GRRNMLLYFEHADVDAAFQDI----AP-HVELIHPLERQAWG-QRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CCSSCEEEEEESCHHHHHC-C----GG-GSCEEEEEEECTTS-CEEEEEECTTCCEEEEEECC
T ss_pred             CCCceEEEEEeCcHHHHHHHH----Hc-CCccccCCccCCCC-CEEEEEECCCCCEEEEEecc
Confidence            347789999999999999999    68 99998888776543 47899999999999999974

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.64  E-value=5e-15  Score=113.57  Aligned_cols=53  Identities=13%  Similarity=0.085  Sum_probs=45.0

Q ss_pred             eEEE-EeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          154 QVAI-STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       154 Hiaf-~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +.+| .|+|+++++++|    +++|+++..+|...+. +.+.+||+|||||.|||+++.
T Consensus        92 ~~~~~~v~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           92 VAGFMMIEGIDALHKYV----KENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             EEEEEEEECHHHHHHHH----HHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             cEEEEEcCCHHHHHHHH----HHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence            4466 999999999999    7999999888876654 347899999999999999863

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.63  E-value=8e-15  Score=111.94  Aligned_cols=124  Identities=17%  Similarity=0.154  Sum_probs=79.0

Q ss_pred             eeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeCcc
Q 027676           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDA  103 (220)
Q Consensus        24 l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~~~  103 (220)
                      -..+.|.|+|+++|++||+++|||++..+...  ..  .+++..+    ...+.|....+...     .           
T Consensus         6 ~~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~--~~--~~~l~~g----~~~l~l~~~~~~~~-----~-----------   61 (145)
T 2rk9_A            6 RVVPELYCFDINVSQSFFVDVLGFEVKYERPD--EE--FVYLTLD----GVDVMLEGIAGKSR-----K-----------   61 (145)
T ss_dssp             CEEEEEEESSHHHHHHHHHHTTCCEEEEEEGG--GT--EEEEEET----TEEEEEEEC----------------------
T ss_pred             cceEEEEECCHHHHHHHHHhccCCEEEeecCC--CC--EEEEEcC----CeEEEEEeccCCCc-----c-----------
Confidence            45689999999999999999999999753321  12  2344432    22344432100000     0           


Q ss_pred             ccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHH-cCCeeec
Q 027676          104 LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQE-LGGKITR  182 (220)
Q Consensus       104 ~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~-~G~~i~~  182 (220)
                                     +.                    ....+...+.|+. ++|.|+|+++++++|    ++ +|+++..
T Consensus        62 ---------------~~--------------------~~~~~~~~~~g~~-~~~~v~dvd~~~~~l----~~~~G~~~~~  101 (145)
T 2rk9_A           62 ---------------WL--------------------SGDLEFPLGSGVN-FQWDVIDIEPLYQRV----NESAADSIYL  101 (145)
T ss_dssp             ----------------------------------------CCSSTTTTEE-EEEECSCHHHHHHHH----HHHHGGGEEE
T ss_pred             ---------------cc--------------------cCccccCCCCceE-EEEEECCHHHHHHHH----HhhCCCeEec
Confidence                           00                    0000011233555 999999999999999    78 9999987


Q ss_pred             CCccc------CCCCceEEEEECCCCCEEEEEech
Q 027676          183 QPGSI------PGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       183 ~p~~~------~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +|...      ...+.+.++|+|||||.|||++..
T Consensus       102 ~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A          102 ALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             EEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             CccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            77641      122347899999999999999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.63  E-value=4.2e-15  Score=126.09  Aligned_cols=124  Identities=18%  Similarity=0.163  Sum_probs=81.2

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCC--CC-ceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~   95 (220)
                      +...+++|++|.|+|+++|++||+++|||++......+  .+ .....|+..+.  .+..                    
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~--------------------  195 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG--RHHT--------------------  195 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCS--------------------
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECC--Ccce--------------------
Confidence            34579999999999999999999999999987543211  11 11222332210  0000                    


Q ss_pred             EEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHH
Q 027676           96 FAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQE  175 (220)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~  175 (220)
                                                             +.+..      .....++.|+||.|+|+++..+. .++++ 
T Consensus       196 ---------------------------------------~~~~~------~~~~~~~~hiaf~v~d~~~v~~~-~~~l~-  228 (292)
T 1kw3_B          196 ---------------------------------------IALAA------FPIPKRIHHFMLQANTIDDVGYA-FDRLD-  228 (292)
T ss_dssp             ---------------------------------------EEEEC------CSCSSSEEEEEEEBSSHHHHHHH-HHHHH-
T ss_pred             ---------------------------------------EEEec------CCCCCceEEEEEEcCCHHHHHHH-HHHHh-
Confidence                                                   11110      00124788999999997654332 23338 


Q ss_pred             cCCeeecCCcccCCCCceEEEEECCCCC-EEEEEech
Q 027676          176 LGGKITRQPGSIPGLNTKITSFVDPDGW-KTVLVDNE  211 (220)
Q Consensus       176 ~G~~i~~~p~~~~~~~~~~~~~~DPdG~-~iElv~~~  211 (220)
                      +|+++..+|...+.+..+++||+||||| .|||++..
T Consensus       229 ~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          229 AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            9999988886654433477899999999 99999864

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.62  E-value=6.5e-15  Score=126.75  Aligned_cols=115  Identities=21%  Similarity=0.271  Sum_probs=83.3

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      ...+++|+.|.|+|++++++||+++|||++..+..  +   ...|+..+  ..++.+.+                     
T Consensus       138 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~--~~~~~l~l---------------------  189 (310)
T 3b59_A          138 VPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCN--SAHHRIAI---------------------  189 (310)
T ss_dssp             CCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESS--SBSCSEEE---------------------
T ss_pred             cCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecC--CCcceEEE---------------------
Confidence            45899999999999999999999999999876531  1   23444331  11111111                     


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHH---HHHHHHHHHHc
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS---AEVVNLVTQEL  176 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~---~~~l~~~~~~~  176 (220)
                                                            ..       .. .|+.|++|.|+|++++   +++|    +++
T Consensus       190 --------------------------------------~~-------~~-~g~~hi~f~v~d~d~~~~~~~~l----~~~  219 (310)
T 3b59_A          190 --------------------------------------LP-------GP-PCLNHVAYDMLSVDDMMRGAHRL----KVK  219 (310)
T ss_dssp             --------------------------------------EE-------SS-SEEEEEEEECSSHHHHHHHHHHH----HHT
T ss_pred             --------------------------------------EC-------CC-CceEEEEEEcCCHHHHHHHHHHH----HHc
Confidence                                                  10       01 4688999999998766   6666    899


Q ss_pred             CCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          177 GGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       177 G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      |+++...|...+.+..+++||+|||||.||+++...
T Consensus       220 G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          220 GIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             TCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             CCceeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence            999988876643334578999999999999998643

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.61  E-value=3.9e-15  Score=127.31  Aligned_cols=58  Identities=14%  Similarity=0.099  Sum_probs=45.9

Q ss_pred             CceeeEEEEeCCH---HHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          150 NAYAQVAISTDDV---YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv---~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .++.|+||.|+|+   ++++++|    +++|+++..+|...+.+..+++||+|||||.|||++..
T Consensus       208 ~~~~hiaf~v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          208 KRINHLMIEYTHLDDLGYAHDLV----RQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             SSEEEEEEEESSHHHHHHHHHHH----HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CCceEEEEEcCCHHHHHHHHHHH----HHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            4789999999994   4455566    89999998877655433347789999999999999864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.61  E-value=1.3e-14  Score=126.07  Aligned_cols=127  Identities=14%  Similarity=0.169  Sum_probs=81.7

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCC--ceeEEEEEeecCCcccCCCCceeEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ--SHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~--~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      .+.+++|++|.|+|+++|++||+++|||++..+....++ -..+++.++...  ....+.+......             
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~l~l~~~~~~-------------   92 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDD-PSMYHLFYGDKTGSPGTELSFFEIPLV-------------   92 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTE-EEEEEEEEESTTCCTTSEEEEEECTTC-------------
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCC-CceEEEEEcCCCCCCCCEEEEEECCCC-------------
Confidence            468999999999999999999999999998765321110 011222111110  1122222110000             


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC---CHHHHHHHHHHHHH
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DVYKSAEVVNLVTQ  174 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~---Dv~a~~~~l~~~~~  174 (220)
                                                                   ........++.|+||.|+   |+++++++|    +
T Consensus        93 ---------------------------------------------~~~~~~~~~~~hiaf~v~~~~dld~~~~~l----~  123 (338)
T 1zsw_A           93 ---------------------------------------------GRTYRGTNAITRIGLLVPSEDSLHYWKERF----E  123 (338)
T ss_dssp             ---------------------------------------------CBCBCCBSEEEEEEEEESCHHHHHHHHHHH----H
T ss_pred             ---------------------------------------------ccCcCCCCCeeeEEEEcCCHHHHHHHHHHH----H
Confidence                                                         000112247889999999   577777777    7


Q ss_pred             HcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          175 ELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       175 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++|+++..++. ..+  .+.+||+|||||.|||++...
T Consensus       124 ~~G~~~~~~~~-~~G--~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A          124 KFDVKHSEMTT-YAN--RPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             HTTCEECCSEE-ETT--EEEEEEECTTCCEEEEEECTT
T ss_pred             HCCCccccccc-cCC--cEEEEEECCCCCEEEEEEcCC
Confidence            99999886654 222  388999999999999999764

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.61  E-value=9.2e-15  Score=124.29  Aligned_cols=123  Identities=16%  Similarity=0.150  Sum_probs=82.7

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCC--CC-ceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~   96 (220)
                      ...+++|+.|.|+|+++|++||+++|||++......+  .+ .....|+..+.  .+..+.                   
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~-------------------  197 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNE--RHHTLA-------------------  197 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEE-------------------
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCC--CcceEE-------------------
Confidence            3578999999999999999999999999987642211  00 11223332210  111111                   


Q ss_pred             EEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHc
Q 027676           97 AIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL  176 (220)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~  176 (220)
                                                              +..  .    ....++.|+||.|+|++++.+.. ++ +++
T Consensus       198 ----------------------------------------l~~--~----~~~~~~~hiaf~v~d~~~~~~~~-~~-~~~  229 (297)
T 1lgt_A          198 ----------------------------------------IAA--F----PLPKRIHHFMLEVASLDDVGFAF-DR-VDA  229 (297)
T ss_dssp             ----------------------------------------EEC--C----CCSSSEEEEEEEBSCHHHHHHHH-HH-HHT
T ss_pred             ----------------------------------------EEc--C----CCCCCceEEEEeCCCHHHHHHHH-HH-HhC
Confidence                                                    110  0    01247889999999987665333 44 689


Q ss_pred             CCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          177 GGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       177 G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      |+++..+|...+.+..+++||+|||||.|||++..
T Consensus       230 G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          230 DGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             TTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             CCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            99999888765544446799999999999999864

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.60  E-value=9e-15  Score=124.91  Aligned_cols=117  Identities=17%  Similarity=0.279  Sum_probs=81.7

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      .+++++|+.|.|+|+++|++||+++|||++..+..  .+   ..++..+....+..+.+.                    
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~---~~~l~~~~~~~~~~l~~~--------------------   58 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QG---RVYLKAWTEVDKFSLVLR--------------------   58 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TS---CEEEECTTCCBSCSEEEE--------------------
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CC---cEEEEecCCCCceEEEEc--------------------
Confidence            46899999999999999999999999999987532  11   133332111011101000                    


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEe---CCHHHHHHHHHHHHHHc
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST---DDVYKSAEVVNLVTQEL  176 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v---~Dv~a~~~~l~~~~~~~  176 (220)
                                                                    .....+..|+||.|   +|++++++++    +++
T Consensus        59 ----------------------------------------------~~~~~~~~~~~f~v~~~~dv~~~~~~l----~~~   88 (307)
T 1mpy_A           59 ----------------------------------------------EADEPGMDFMGFKVVDEDALRQLERDL----MAY   88 (307)
T ss_dssp             ----------------------------------------------ECSSCEEEEEEEEESCHHHHHHHHHHH----HHH
T ss_pred             ----------------------------------------------cCCCCCcceEEEEeCCHHHHHHHHHHH----HHc
Confidence                                                          00123678999999   7888888888    799


Q ss_pred             CCeeecCCc-ccCCCCceEEEEECCCCCEEEEEechh
Q 027676          177 GGKITRQPG-SIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       177 G~~i~~~p~-~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      |+++..+|. ..++ ..+.++|+|||||.|||++...
T Consensus        89 G~~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  124 (307)
T 1mpy_A           89 GCAVEQLPAGELNS-CGRRVRFQAPSGHHFELYADKE  124 (307)
T ss_dssp             TCCCEEECTTSSTT-BCCEEEEECTTSCEEEEESCBC
T ss_pred             CCceecCCcccCCC-ceEEEEEECCCCCEEEEEEcch
Confidence            999887764 2233 3478999999999999998643

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.60  E-value=1.5e-14  Score=126.19  Aligned_cols=116  Identities=17%  Similarity=0.226  Sum_probs=81.1

Q ss_pred             ccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        18 ~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ...+.+++|+.|.|+|+++|++||+++|||++..+..   +  ..++...++ ..+..+.+.                  
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~--~~~l~~~~~-~~~~~l~l~------------------   61 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q--SVYLRGYED-PYPWSLKIT------------------   61 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T--EEEEECTTC-SSSCSEEEE------------------
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C--EEEEEecCC-CCceEEEEe------------------
Confidence            3467899999999999999999999999999987631   1  222222111 111111111                  


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHH
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQ  174 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~  174 (220)
                                                               .       ....++.|+||.|+|   +++++++|    +
T Consensus        62 -----------------------------------------~-------~~~~g~~~~af~v~~~~dld~~~~~l----~   89 (339)
T 3lm4_A           62 -----------------------------------------E-------APEAGMGHAAMRTSSPEALERRAKSL----T   89 (339)
T ss_dssp             -----------------------------------------E-------CSSCEEEEEEEEESSHHHHHHHHHHH----H
T ss_pred             -----------------------------------------e-------CCCCCcceEEEEeCCHHHHHHHHHHH----H
Confidence                                                     0       112368899999998   55666666    8


Q ss_pred             HcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          175 ELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       175 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++|+++...+.. ++ ..+.++|+|||||.|||+...
T Consensus        90 ~~G~~~~~~~~~-~~-~~~~~~f~DPdG~~iel~~~~  124 (339)
T 3lm4_A           90 DGNVDGTWSEDQ-FG-YGKTFEYQSPDGHNLQLLWEA  124 (339)
T ss_dssp             HTTCCEEEECCS-TT-BCCEEEEECTTCCEEEEECCB
T ss_pred             HCCCceeeccCC-CC-ceEEEEEECCCCCEEEEEEee
Confidence            999999877652 22 347899999999999999763

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.60  E-value=5.5e-15  Score=126.33  Aligned_cols=61  Identities=10%  Similarity=-0.045  Sum_probs=46.1

Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .++.|+||.|+|++++.+ ..++++++|+++..+|...+.+..+++||+|||||.|||+...
T Consensus       211 ~~~~hiaf~v~d~~~v~~-~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          211 KRLNHLMLEYTHMEDLGY-THQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             SSEEEEEEEESSHHHHHH-HHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CceeEEEEEcCCHHHHHH-HHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            478899999999765332 2233389999998887665443447899999999999999863

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.58  E-value=2e-14  Score=124.21  Aligned_cols=119  Identities=22%  Similarity=0.253  Sum_probs=83.1

Q ss_pred             cccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEE
Q 027676           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (220)
Q Consensus        17 ~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~   96 (220)
                      +.+.+.+++|+.|.|+|++++++||+++|||++..+.   ++   ..|+....+..+..+.+..                
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~---~~---~~~l~~~~~~~~~~l~l~~----------------   68 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED---EN---TIYLRSLEEFIHHNLVLRQ----------------   68 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC---SS---EEEEECTTCCSSCSEEEEE----------------
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeec---CC---EEEEEecCCCCcEEEEEEE----------------
Confidence            4456789999999999999999999999999987753   11   2333321111111222210                


Q ss_pred             EEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEe---CCHHHHHHHHHHHH
Q 027676           97 AIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST---DDVYKSAEVVNLVT  173 (220)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v---~Dv~a~~~~l~~~~  173 (220)
                                                                        ....++.|++|.|   +|+++++++|    
T Consensus        69 --------------------------------------------------~~~~~~~~~~f~v~~~~dl~~~~~~l----   94 (323)
T 1f1u_A           69 --------------------------------------------------GPIAAVAAFAYRVKSPAEVDAAEAYY----   94 (323)
T ss_dssp             --------------------------------------------------CSSCEEEEEEEEESSHHHHHHHHHHH----
T ss_pred             --------------------------------------------------CCCCCeeEEEEEeCCHHHHHHHHHHH----
Confidence                                                              0123677999999   6677777777    


Q ss_pred             HHcCCeeecCCc-ccCCCCceEEEEECCCCCEEEEEechh
Q 027676          174 QELGGKITRQPG-SIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       174 ~~~G~~i~~~p~-~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++|+++..++. ..++ .++.++|+||+||.|||++...
T Consensus        95 ~~~G~~~~~~~~~~~~~-~g~~~~~~DP~G~~iel~~~~~  133 (323)
T 1f1u_A           95 KELGCRTERRKEGFTKG-IGDSVRVEDPLGFPYEFFYETE  133 (323)
T ss_dssp             HHTTCCEEEETTCSSTT-BCSEEEEECTTSCEEEEECCBC
T ss_pred             HhCCCcEEeccccccCC-cceEEEEECCCCCEEEEEEecc
Confidence            799999988776 3333 3478999999999999998643

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.56  E-value=7.2e-14  Score=122.07  Aligned_cols=122  Identities=10%  Similarity=-0.033  Sum_probs=78.7

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      ..+.+++|++|.|+|+++|++||+++|||++..+..   +  ...|.. |.  .+..+.|....+...            
T Consensus       149 ~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~---~--~~~~~~-g~--~~~~l~l~~~~~~~~------------  208 (335)
T 3oaj_A          149 VAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG---D--FVRYRS-AG--DIGNVIDLKLTPIGR------------  208 (335)
T ss_dssp             TSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET---T--EEEEEC-SS--SSSCEEEEESSCCCB------------
T ss_pred             hhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC---C--EEEEEe-CC--CCcEEEEEeCCCCCc------------
Confidence            356899999999999999999999999999987631   1  122221 21  122233321110000            


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                                                    ......+++|+||.|+|.+ .+..+.++++++|+
T Consensus       209 ----------------------------------------------~~~g~g~~~HiAf~v~d~~-~l~~~~~~L~~~G~  241 (335)
T 3oaj_A          209 ----------------------------------------------GQMGAGTVHHIAWRANDDE-DQLDWQRYIASHGY  241 (335)
T ss_dssp             ----------------------------------------------CBCSBTEEEEEEEEESSHH-HHHHHHHHHHHTTC
T ss_pred             ----------------------------------------------CCCCCcceEEEEEEcCCHH-HHHHHHHHHHHCCC
Confidence                                                          0011236899999999943 33344445589999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ++......   ...+.+||+||+|+.|||...
T Consensus       242 ~~~~~~~r---~~~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          242 GVTPVRDR---NYFNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             CCCCCEEC---SSSEEEEEECTTSCEEEEEES
T ss_pred             CccccccC---CcEEEEEEECCCCcEEEEEeC
Confidence            86533222   224789999999999999987

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.55  E-value=7.2e-14  Score=118.90  Aligned_cols=122  Identities=19%  Similarity=0.132  Sum_probs=82.7

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCC--ceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ....+.|+.|.|+|++++++||+++|||++..... +.+  .+..  +..+   ......+....+.             
T Consensus        29 ~~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~-~~~~~~~~~--~~~~---g~~~~~l~~~~~~-------------   89 (282)
T 3oxh_A           29 RQGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPV-PGGGGVYSM--ATLN---GEAVAAIAPMPPG-------------   89 (282)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEE--EEET---TEEEEEEEECCSC-------------
T ss_pred             CCCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCC-CCCccCEEE--EEeC---CeeeEeeccCCCC-------------
Confidence            33689999999999999999999999999876532 111  1221  1111   1111111110000             


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcC
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELG  177 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G  177 (220)
                                                                    . .....+..|++|.|+|++++++++    +++|
T Consensus        90 ----------------------------------------------~-~~~~~~~~~~~~~v~d~d~~~~~l----~~~G  118 (282)
T 3oxh_A           90 ----------------------------------------------A-PEGMPPIWNTYIAVDDVDAVVDKV----VPGG  118 (282)
T ss_dssp             ----------------------------------------------C----CCCEEEEEEECSCHHHHHTTT----TTTT
T ss_pred             ----------------------------------------------C-CCCCCCcEEEEEEeCCHHHHHHHH----HHCC
Confidence                                                          0 001123457999999999999999    7999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++..+|...++. ++.++|+||+||.|||++...
T Consensus       119 ~~~~~~p~~~~~~-g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A          119 GQVMMPAFDIGDA-GRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             CEEEEEEEEETTT-EEEEEEECTTCCEEEEEEESS
T ss_pred             CEEEECCEecCCC-eEEEEEECCCCCEEEEEEccc
Confidence            9999888776543 488999999999999999754

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.55  E-value=5.2e-14  Score=119.63  Aligned_cols=114  Identities=15%  Similarity=0.174  Sum_probs=80.3

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +++++|+.|.|+|+++|++||+++|||++..+..   +   ..++..+.  ....+.+.                     
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~---~~~~~~~~--~~~~l~~~---------------------   52 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD---N---GDLFRIDS--RAWRIAVQ---------------------   52 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---T---EEEEESSS--BSCSEEEE---------------------
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC---C---eEEEEeCC--CcEEEEEe---------------------
Confidence            4789999999999999999999999999987531   1   23333211  11111110                     


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC---CHHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DVYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~---Dv~a~~~~l~~~~~~~G  177 (220)
                                                                   .....++.|+||.|+   |+++++++|    +++|
T Consensus        53 ---------------------------------------------~~~~~~~~~~~f~v~~~~dl~~~~~~l----~~~G   83 (297)
T 1lgt_A           53 ---------------------------------------------QGEVDDLAFAGYEVADAAGLAQMADKL----KQAG   83 (297)
T ss_dssp             ---------------------------------------------ECTTCEEEEEEEEESSHHHHHHHHHHH----HHTT
T ss_pred             ---------------------------------------------cCCCCCccEEEEEeCCHHHHHHHHHHH----HHCC
Confidence                                                         001236789999999   888888888    7999


Q ss_pred             CeeecCCccc--CCCCceEEEEECCCCCEEEEEechh
Q 027676          178 GKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       178 ~~i~~~p~~~--~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++...+...  ..+..+.+||+|||||.|||++...
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           84 IAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             CCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             CeEEeCCccccccCCceeEEEEECCCCCEEEEEECcc
Confidence            9988766421  0123488999999999999998753

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.55  E-value=2.5e-14  Score=122.32  Aligned_cols=115  Identities=14%  Similarity=0.156  Sum_probs=80.4

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +.+.+++|+.|.|+|+++|++||+++|||++..+.  .++   ..++..+.  .+..+.|..                  
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~~---~~~~~~~~--~~~~l~l~~------------------   56 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--EDD---RIYLRMDR--WHHRIVLHA------------------   56 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCS--CTT---EEEEECSS--BSCSEEEEC------------------
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeecc--CCC---eEEEEeCC--CeEEEEEEE------------------
Confidence            45689999999999999999999999999987521  111   22333321  111222210                  


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC---CHHHHHHHHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DVYKSAEVVNLVTQE  175 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~---Dv~a~~~~l~~~~~~  175 (220)
                                                                      ....++.|++|.|+   |+++++++|    ++
T Consensus        57 ------------------------------------------------~~~~~~~~~~f~v~~~~dl~~~~~~l----~~   84 (305)
T 2wl9_A           57 ------------------------------------------------DGSDDLAYIGWRVAGPVELDELAEQL----KN   84 (305)
T ss_dssp             ------------------------------------------------SSCCEEEEEEEECSSHHHHHHHHHHH----HH
T ss_pred             ------------------------------------------------CCCCCeEEEEEEECCHHHHHHHHHHH----HH
Confidence                                                            01236789999997   577777777    79


Q ss_pred             cCCeeecCCccc--CCCCceEEEEECCCCCEEEEEec
Q 027676          176 LGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       176 ~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +|+++..+|...  ..+..+.+||+|||||.|||++.
T Consensus        85 ~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           85 AGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             TTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             CCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            999988776532  12234789999999999999987

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.54  E-value=1.4e-13  Score=119.52  Aligned_cols=120  Identities=17%  Similarity=0.102  Sum_probs=79.6

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCc-eeEEEEEeecCCcccCCCCceeEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS-HFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~-~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      +.+.+++|++|.|+|+++|++||+++|||++..+..    .+ ..|. .++.+. ...+.+..  +..            
T Consensus       176 ~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~-~~~~-~~~~g~~~~~~~~~~--~~~------------  235 (338)
T 1zsw_A          176 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QE-AIFQ-SIKGEAFGEIVVKYL--DGP------------  235 (338)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SE-EEEE-SSTTCSTTCEEEEEC--CSS------------
T ss_pred             ccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----Ce-EEEE-ecCCCCceEEEEecc--CCC------------
Confidence            456899999999999999999999999999976532    11 2222 110000 01111110  000            


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC---CHHHHHHHHHHHHH
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DVYKSAEVVNLVTQ  174 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~---Dv~a~~~~l~~~~~  174 (220)
                                                                    .......++.|+||.|+   |+++++++|    +
T Consensus       236 ----------------------------------------------~~~~~~~~~~hiaf~v~~~~dv~~~~~~l----~  265 (338)
T 1zsw_A          236 ----------------------------------------------TEKPGRGSIHHLAIRVKNDAELAYWEEQV----K  265 (338)
T ss_dssp             ----------------------------------------------BCBCCBTCEEEEEEEESSHHHHHHHHHHH----H
T ss_pred             ----------------------------------------------CCCCCCCceEEEEEEeCCHHHHHHHHHHH----H
Confidence                                                          00011236889999999   577777777    7


Q ss_pred             HcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          175 ELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       175 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++|+++. +|...  ...+.+||+|||||.|||++..
T Consensus       266 ~~G~~~~-~~~~~--~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          266 QRGFHSS-GIIDR--FYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             HTTCCCC-CCEEC--SSEEEEEEECTTCCEEEEEEEE
T ss_pred             HCCCcee-eeeec--CceEEEEEECCCCCEEEEEEcC
Confidence            9999985 55443  2357899999999999999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.54  E-value=4.3e-14  Score=119.84  Aligned_cols=113  Identities=14%  Similarity=0.153  Sum_probs=79.7

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +++++|+.|.|+|+++|++||+++|||++..+..   +   ..|+..+.  ....+.+.                     
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~---~~~l~~~~--~~~~l~~~---------------------   52 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG---D---AALYRADQ--RAWRIAVQ---------------------   52 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---T---EEEEESSS--BSCSEEEE---------------------
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC---C---eEEEEcCC--ceEEEEEc---------------------
Confidence            5789999999999999999999999999987531   1   12333211  00001000                     


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC---CHHHHHHHHHHHHHHcC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DVYKSAEVVNLVTQELG  177 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~---Dv~a~~~~l~~~~~~~G  177 (220)
                                                                   .....++.|+||.|+   |+++++++|    +++|
T Consensus        53 ---------------------------------------------~~~~~~~~~~~f~v~~~~dl~~~~~~l----~~~G   83 (292)
T 1kw3_B           53 ---------------------------------------------PGELDDLAYAGLEVDDAAALERMADKL----RQAG   83 (292)
T ss_dssp             ---------------------------------------------ECTTCEEEEEEEECSSHHHHHHHHHHH----HHHT
T ss_pred             ---------------------------------------------cCCCCCccEEEEEECCHHHHHHHHHHH----HHcC
Confidence                                                         001236789999999   777888887    7999


Q ss_pred             CeeecCCccc---CCCCceEEEEECCCCCEEEEEechh
Q 027676          178 GKITRQPGSI---PGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       178 ~~i~~~p~~~---~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++..+|...   ++ ..+.++|+|||||.|||++...
T Consensus        84 ~~~~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           84 VAFTRGDEALMQQRK-VMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             CCCEECCHHHHHHHT-CSEEEEEECTTSCEEEEEECCC
T ss_pred             CeEeecCcccccccC-ceEEEEEECCCCCEEEEEECcc
Confidence            9988776531   22 2478999999999999998653

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.54  E-value=5.3e-14  Score=119.70  Aligned_cols=113  Identities=10%  Similarity=0.058  Sum_probs=77.4

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEE-eecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLR-KRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~-~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      .+++++|+.|.|+|+++|++||+++|||++.. +.   ++   ..++..+.  ....+.+.                   
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~---~~~~~~~~--~~~~l~l~-------------------   54 (300)
T 2zyq_A            2 SIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EG---ALYLRMDD--FPARLVVV-------------------   54 (300)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SS---CEEEESSS--SSCSEEEE-------------------
T ss_pred             CcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CC---eEEEEeCC--CcEEEEEe-------------------
Confidence            46799999999999999999999999999865 31   11   12333211  11111111                   


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQE  175 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~~  175 (220)
                                                              .       ....++.|++|.|+|   +++++++|    ++
T Consensus        55 ----------------------------------------~-------~~~~~~~~~~~~v~~~~dl~~~~~~l----~~   83 (300)
T 2zyq_A           55 ----------------------------------------P-------GEHDRLLEAGWECANAEGLQEIRNRL----DL   83 (300)
T ss_dssp             ----------------------------------------E-------CSSCEEEEEEEECSSHHHHHHHHHHH----HH
T ss_pred             ----------------------------------------c-------CCCCCcceEEEEeCCHHHHHHHHHHH----HH
Confidence                                                    0       012367899999986   55566666    89


Q ss_pred             cCCeeecCCccc--CCCCceEEEEECCCCCEEEEEec
Q 027676          176 LGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       176 ~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +|+++..++...  ..+..+.+||+|||||.|||++.
T Consensus        84 ~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           84 EGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             HTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             cCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            999988766531  01224789999999999999997

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.53  E-value=1.3e-13  Score=117.26  Aligned_cols=56  Identities=21%  Similarity=0.360  Sum_probs=49.2

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +..|++|.|+|++++++++    +++|+++..+|...++ ..++++|+|||||.|||++..
T Consensus       224 ~~~~~~~~v~dvd~~~~~~----~~~G~~~~~~p~~~~~-~~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          224 NHWHVYFAVDDADATAAKA----AAAGGQVIAEPADIPS-VGRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             SEEEEEEECSCHHHHHHHH----HHTTCEEEEEEEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             CeEEEEEEeCCHHHHHHHH----HHcCCEEecCCeEcCC-CeEEEEEECCCCCEEEEEecC
Confidence            4568999999999999999    7999999998887665 348899999999999999874

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.53  E-value=3.1e-14  Score=121.62  Aligned_cols=116  Identities=14%  Similarity=0.093  Sum_probs=79.1

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +.+++++|+.|.|+|+++|++||+++|||++..+.  +.   ...|+..+  ..++.+.|.                   
T Consensus         5 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~---~~~~~~~~--~~~~~l~l~-------------------   58 (302)
T 2ehz_A            5 AAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEG--EK---DRFYLRMD--YWHHRIVVH-------------------   58 (302)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCS--CS---SEEEEESS--SBSCSEEEE-------------------
T ss_pred             ccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEecc--CC---cceEEEeC--CCceEEEEe-------------------
Confidence            35689999999999999999999999999997642  11   12233221  111111111                   


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC---CHHHHHHHHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DVYKSAEVVNLVTQE  175 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~---Dv~a~~~~l~~~~~~  175 (220)
                                                                     .....++.|++|.|+   |+++++++|    ++
T Consensus        59 -----------------------------------------------~~~~~~~~~~~~~v~~~~dl~~~~~~l----~~   87 (302)
T 2ehz_A           59 -----------------------------------------------HNGQDDLEYLGWRVAGKPEFEALGQKL----ID   87 (302)
T ss_dssp             -----------------------------------------------SSCCSEEEEEEEEESSHHHHHHHHHHH----HH
T ss_pred             -----------------------------------------------cCCCCCeeEEEEEECCHHHHHHHHHHH----HH
Confidence                                                           001236789999996   466666666    89


Q ss_pred             cCCeeecCCcccCC--CCceEEEEECCCCCEEEEEech
Q 027676          176 LGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       176 ~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +|+++..+|...+.  +..+.+||+|||||.|||++..
T Consensus        88 ~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  125 (302)
T 2ehz_A           88 AGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGP  125 (302)
T ss_dssp             TTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEE
T ss_pred             CCCcEEECCccccccccceEEEEEECCCCCEEEEEECC
Confidence            99998877654321  2347899999999999999863

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.53  E-value=2.2e-13  Score=107.34  Aligned_cols=51  Identities=12%  Similarity=0.094  Sum_probs=44.6

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHcCCeeecCCccc--CCCCceEEEEECCCCCEEEEEech
Q 027676          154 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       154 Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      |++|.|+|+++++++|    +++|++ ..+|...  +.  .+.++|+||+||.|+|++..
T Consensus       104 ~l~~~vdDvda~~~~l----~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          104 TFLLGTKDAEAAVAKA----VDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             EEEEECSCHHHHHHHH----HHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC--
T ss_pred             EEEEEcCCHHHHHHHH----HHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeec
Confidence            8999999999999999    789999 8888766  54  48999999999999999864

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.53  E-value=1.1e-13  Score=116.51  Aligned_cols=116  Identities=15%  Similarity=0.265  Sum_probs=78.3

Q ss_pred             ccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        18 ~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ...+.+++|+.|.|+|++++++||+++|||+++.+..      ..+++..++    ..+.|....               
T Consensus        21 ~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~----~~l~l~~~~---------------   75 (252)
T 3pkv_A           21 QGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGV----SQIQFRAAA---------------   75 (252)
T ss_dssp             ----CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETT----EEEEEEECC---------------
T ss_pred             cCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCC----EEEEEEECC---------------
Confidence            3456899999999999999999999999999877532      134554421    233332110               


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC--HHHHHHHHHHHHHH
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD--VYKSAEVVNLVTQE  175 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D--v~a~~~~l~~~~~~  175 (220)
                                                                       ..+.+..|+||.|++  +++++++|    ++
T Consensus        76 -------------------------------------------------~~~~~~~hiaf~V~~~dld~~~~rL----~~  102 (252)
T 3pkv_A           76 -------------------------------------------------DGTKPFYHIAINIAANHFQEGKAWL----SG  102 (252)
T ss_dssp             -------------------------------------------------TTCCCCCEEEEEECTTCHHHHHHHH----TT
T ss_pred             -------------------------------------------------CCCCCeeEEEEEecHHHHHHHHHHH----Hh
Confidence                                                             012257799999864  66666666    68


Q ss_pred             cCCeeecC-Ccc---cCCCCceEEEEECCCCCEEEEEechh
Q 027676          176 LGGKITRQ-PGS---IPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       176 ~G~~i~~~-p~~---~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      + +++..+ +..   ...+..+.+||+|||||.|||++...
T Consensus       103 ~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A          103 F-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             S-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             c-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            8 888653 211   12334588999999999999999754

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.53  E-value=1.2e-13  Score=118.75  Aligned_cols=117  Identities=23%  Similarity=0.362  Sum_probs=81.8

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +.+.++.|+.|.|+|++++++||+++|||++..+.  +    ...++..+....+..+.|..                  
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~--~----~~~~l~~~~~~~~~~l~l~~------------------   59 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGED--A----NNAWFKAQGADEHHVVQLRR------------------   59 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEC--S----SEEEEECTTSCCSCSEEEEE------------------
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeec--C----CeEEEEECCCCCCEEEEEEE------------------
Confidence            45689999999999999999999999999987652  1    12333321100112222210                  


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEe---CCHHHHHHHHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST---DDVYKSAEVVNLVTQE  175 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v---~Dv~a~~~~l~~~~~~  175 (220)
                                                                      ....++.|++|.|   +|+++++++|    ++
T Consensus        60 ------------------------------------------------~~~~~~~~~~~~v~~~~dld~~~~~l----~~   87 (310)
T 3b59_A           60 ------------------------------------------------ADENRIDVIALAADSRSDVDALRASV----EA   87 (310)
T ss_dssp             ------------------------------------------------CSSCEEEEEEEEESSHHHHHHHHHHH----HH
T ss_pred             ------------------------------------------------CCCCCeeEEEEEeCCHHHHHHHHHHH----Hh
Confidence                                                            0123677999999   6677777777    79


Q ss_pred             cCCeeecCCcc--cCCCCceEEEEECCCCCEEEEEechh
Q 027676          176 LGGKITRQPGS--IPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       176 ~G~~i~~~p~~--~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +|+++..++..  .+. ..+.++|+||+||.|||++...
T Consensus        88 ~G~~~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  125 (310)
T 3b59_A           88 AGCKVASEPAVLATPG-GGYGFRFFSPDGLLFEVSSDVA  125 (310)
T ss_dssp             HTCCBCCCSEECCSTT-CCEEEEEECTTSCEEEEEECCC
T ss_pred             CCCeEeecCccccccC-CceEEEEECCCCCEEEEEEccc
Confidence            99999887764  333 3478999999999999998643

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.52  E-value=1.9e-13  Score=121.27  Aligned_cols=137  Identities=16%  Similarity=0.159  Sum_probs=90.3

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCC--ceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~   96 (220)
                      +.+++++||+|.|+|++++++||+++|||+++.+...+.+  ....+++..+    ...++|.......+..        
T Consensus        18 ~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~--------   85 (381)
T 1t47_A           18 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPW--------   85 (381)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHH--------
T ss_pred             CcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcc--------
Confidence            5568999999999999999999999999999876321111  1233444332    2334443211000000        


Q ss_pred             EEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHc
Q 027676           97 AIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL  176 (220)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~  176 (220)
                                            +    +.               ........+.++.||||.|+|++++++++    +++
T Consensus        86 ----------------------~----~~---------------~~~~~~~~g~gv~~iaf~V~D~~~~~~~l----~~~  120 (381)
T 1t47_A           86 ----------------------G----HF---------------LADHVAEHGDGVVDLAIEVPDARAAHAYA----IEH  120 (381)
T ss_dssp             ----------------------H----HH---------------HHHHHHHHCSEEEEEEEECSCHHHHHHHH----HHT
T ss_pred             ----------------------h----hH---------------HHHHHHhcCCceEEEEEEECCHHHHHHHH----HHc
Confidence                                  0    00               00000123568999999999999999999    799


Q ss_pred             CCeeecCCcccCC--CCceEEEEECCCCCEEEEEechh
Q 027676          177 GGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       177 G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      |+++..+|.....  +..+.+.|+||+|+.++|+++.+
T Consensus       121 G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~  158 (381)
T 1t47_A          121 GARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  158 (381)
T ss_dssp             TCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCC
Confidence            9999988764321  22367889999999999999753

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.50  E-value=1.5e-13  Score=120.37  Aligned_cols=133  Identities=15%  Similarity=0.234  Sum_probs=86.2

Q ss_pred             cCcceeeeEEEEEC--CHHHHHHHHHHhcCCEEEEeec--CCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCcee
Q 027676           19 KDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRD--VPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFG   94 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~--Dle~s~~FY~~vLG~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~   94 (220)
                      ...++++|++|.|+  |++++++||+++|||++....+  .+...+...++..+  ..+..|+|........        
T Consensus       154 ~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~--~g~~~l~l~~~~~~~~--------  223 (357)
T 2r5v_A          154 VDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSA--SGAVTLTLIEPDRNAD--------  223 (357)
T ss_dssp             CCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECT--TSCCEEEEEEECTTSB--------
T ss_pred             CCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECC--CCCEEEEEeeecCCCC--------
Confidence            35689999999999  9999999999999999875432  11112233344321  1222333321110000        


Q ss_pred             EEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCC-c---ccccCCceeeEEEEeCCHHHHHHHHH
Q 027676           95 HFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-T---EYTKGNAYAQVAISTDDVYKSAEVVN  170 (220)
Q Consensus        95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~-~---~~~~~~g~~Hiaf~v~Dv~a~~~~l~  170 (220)
                                                                    ..+ .   ....+.|++||||.|+|+++++++| 
T Consensus       224 ----------------------------------------------~~~~~~~~~~~~~~g~~Hiaf~v~Di~~~~~~L-  256 (357)
T 2r5v_A          224 ----------------------------------------------PGQIDEFLKDHQGAGVQHIAFNSNDAVRAVKAL-  256 (357)
T ss_dssp             ----------------------------------------------CCHHHHHHHHHTSSEEEEEEEECSCHHHHHHHH-
T ss_pred             ----------------------------------------------CchhHHHHHhcCCCCccEEEEEcCCHHHHHHHH-
Confidence                                                          000 0   0113468999999999999999999 


Q ss_pred             HHHHHcCCeeecCCccc----C------CCC------ceEEEEECCCCCEEEEEech
Q 027676          171 LVTQELGGKITRQPGSI----P------GLN------TKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       171 ~~~~~~G~~i~~~p~~~----~------~~~------~~~~~~~DPdG~~iElv~~~  211 (220)
                         +++|+++...|...    .      +..      ..++|++||||++|||++..
T Consensus       257 ---~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          257 ---SERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             ---HHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             ---HHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence               79999988877321    0      000      13799999999999999843

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.45  E-value=1.3e-12  Score=114.30  Aligned_cols=130  Identities=15%  Similarity=0.149  Sum_probs=88.4

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      .+++++||.+.|+|++++++||+++|||+++.+.....+  ..+++..|    ...+.|..+....+..           
T Consensus         2 ~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g----~~~l~l~~~~~~~~~~-----------   64 (357)
T 2r5v_A            2 QNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG----QVTLVLTEPTSDRHPA-----------   64 (357)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET----TEEEEEEEESSTTSHH-----------
T ss_pred             CCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC----CEEEEEeCCCCCCCHH-----------
Confidence            468999999999999999999999999999876432221  22333221    2233333211000000           


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCe
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~  179 (220)
                                                                .......+.++.|+||.|+|++++++++    +++|++
T Consensus        65 ------------------------------------------~~~~~~~g~g~~~iaf~V~D~~~~~~~l----~~~G~~   98 (357)
T 2r5v_A           65 ------------------------------------------AAYLQTHGDGVADIAMATSDVAAAYEAA----VRAGAE   98 (357)
T ss_dssp             ------------------------------------------HHHHHHHSSEEEEEEEEESCHHHHHHHH----HHTTCC
T ss_pred             ------------------------------------------HHHHHhcCCeEEEEEEEECCHHHHHHHH----HHcCCe
Confidence                                                      0000123568999999999999999999    799999


Q ss_pred             eecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          180 ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       180 i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +..+|.....+..+.+.|+||+|..++|+++..
T Consensus        99 ~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~  131 (357)
T 2r5v_A           99 AVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDG  131 (357)
T ss_dssp             EEEEEECCC-CCCCEEEEECSTTCEEEEEECCS
T ss_pred             EeECcEecCCCeEEEEEEeccCCeEEEEEeccc
Confidence            988776433333468899999999999999753

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.45  E-value=2.1e-12  Score=108.88  Aligned_cols=54  Identities=9%  Similarity=0.097  Sum_probs=46.8

Q ss_pred             eeeEEEEeC-CHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          152 YAQVAISTD-DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       152 ~~Hiaf~v~-Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ..+++|.|+ |++++++++    +++|+++..+|...+.+ .+.++|+|||||.|||.++
T Consensus       246 ~~~~~~~v~~dvd~~~~~~----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          246 PVRLHLDAAGTADSLHRRA----VDAGARVDGPPVRRPWG-RSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             CCEEEEEEESCHHHHHHHH----HHTTCCEEEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             ceEEEEEcCccHHHHHHHH----HHcCCccccCcccCCCc-ceEEEEECCCCCEEEeeCC
Confidence            457999999 999999999    79999999888776543 4789999999999999875

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.42  E-value=1.7e-12  Score=116.89  Aligned_cols=156  Identities=15%  Similarity=0.111  Sum_probs=96.7

Q ss_pred             ccccceeeccccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCC--CceeEEEeeecCCCceeEEEEEeecCCc
Q 027676            8 AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE--EKYSNAFLGFGPEQSHFVVELTYNYGVT   85 (220)
Q Consensus         8 ~~~~~~~~~~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~~   85 (220)
                      ..+.+.++  .+..++++||.|+|+|+++|++||+++|||+++.+...+.  ..+..++++.+    ...+.|.......
T Consensus        12 ~~~~~~~~--~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~   85 (424)
T 1sqd_A           12 VRKNPKSD--KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPS   85 (424)
T ss_dssp             --CCCCCC--SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGG
T ss_pred             eecCCCCc--cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCc
Confidence            33444443  3456799999999999999999999999999987653221  12334444432    2345554321110


Q ss_pred             ccCCCCceeEEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCc-----ccccCCceeeEEEEeC
Q 027676           86 SYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-----EYTKGNAYAQVAISTD  160 (220)
Q Consensus        86 ~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~-----~~~~~~g~~Hiaf~v~  160 (220)
                      .... +.                                      ++...+...+++..     ....+.|+.||||.|+
T Consensus        86 ~~~~-~~--------------------------------------~~~~~~p~~~~~~~~~~~~~~~~g~gv~~iAf~Vd  126 (424)
T 1sqd_A           86 LSAG-EI--------------------------------------KPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVE  126 (424)
T ss_dssp             GTTT-CC--------------------------------------GGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEES
T ss_pred             cccc-cc--------------------------------------ccccccccccccchHHHHHHHhcCCeEEEEEEEeC
Confidence            0000 00                                      00000000000000     0123569999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       161 Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      |++++++++    +++|+++..+|....+ ..+...+++|+|+.++|+++.+.
T Consensus       127 Dvdaa~~~l----~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          127 DAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             CHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             CHHHHHHHH----HHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence            999999999    7999999988865433 24778889999999999997654

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.37  E-value=4.6e-11  Score=90.62  Aligned_cols=53  Identities=17%  Similarity=0.083  Sum_probs=45.5

Q ss_pred             eeEEEEeCC---HHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          153 AQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       153 ~Hiaf~v~D---v~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ..++|.|+|   ++++++++    + +|+++..+|...+.+ .+.++|+||+|+.|+|..+.
T Consensus        80 ~~l~~~v~d~~evd~~~~~l----~-~Gg~v~~p~~~~~~G-~~~~~~~Dp~G~~w~l~~~~  135 (136)
T 1u7i_A           80 FSFFVDCESNAQIERLAEAL----S-DGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNLAG  135 (136)
T ss_dssp             EEEEEECCCHHHHHHHHHHH----H-TTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEECC
T ss_pred             eEEEEEcCCHHHHHHHHHHH----H-cCCEEecccccCCCc-ceEEEEECCCCCEEEEEecC
Confidence            368899999   88888888    7 999999999887764 47899999999999998753

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.32  E-value=1e-10  Score=90.25  Aligned_cols=53  Identities=13%  Similarity=0.160  Sum_probs=43.9

Q ss_pred             eeEEEEeCC---HHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          153 AQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       153 ~Hiaf~v~D---v~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .+++|.|+|   +++++++|    + +|+++..+|...+.+ .+.++|+||+|+.|+|++..
T Consensus        82 ~~l~~~v~d~~evd~~~~~l----~-~Gg~i~~p~~~~~wG-~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 CSISLNVDSKAEAERLFNAL----A-EGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             EEEEEECSSHHHHHHHHHHH----H-TTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEESC
T ss_pred             eEEEEEcCCHHHHHHHHHHH----H-CCCEEeecccccCcc-cceEEEECCCCCEEEEEEec
Confidence            479999999   66777776    4 799999999887653 47899999999999999853

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.30  E-value=2.2e-11  Score=109.41  Aligned_cols=146  Identities=14%  Similarity=0.112  Sum_probs=92.5

Q ss_pred             ccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCC--ceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeE
Q 027676           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (220)
Q Consensus        18 ~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~   95 (220)
                      .+..++++||.|.|+|++++++||++.|||+++.+...+.|  ....+++..|    ...++|...........+.    
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G----~~~l~L~~~~~~~~~~~~~----   97 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATA----   97 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGC----
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC----CEEEEEecCCCCccccccc----
Confidence            34568999999999999999999999999999876532221  3444555442    2345554321100000000    


Q ss_pred             EEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHH
Q 027676           96 FAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQE  175 (220)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~  175 (220)
                           +            .+.  +       ..  +.        ........+.|+.||||.|+|++++++++    ++
T Consensus        98 -----p------------~~~--~-------~~--~~--------~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l----~~  137 (418)
T 1sp8_A           98 -----A------------LPS--F-------SA--AA--------ARRFAADHGLAVRAVALRVADAEDAFRAS----VA  137 (418)
T ss_dssp             -----S------------STT--C-------CH--HH--------HHHHHHHHSSEEEEEEEEESCHHHHHHHH----HT
T ss_pred             -----c------------ccc--c-------cc--hh--------HHHHHhhcCCeeEEEEEEeCCHHHHHHHH----HH
Confidence                 0            000  0       00  00        00000123568999999999999999999    79


Q ss_pred             cCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          176 LGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       176 ~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +|+++..+|....+ ..+...+++|.|..++|+++..
T Consensus       138 ~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~  173 (418)
T 1sp8_A          138 AGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPD  173 (418)
T ss_dssp             TTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCT
T ss_pred             CCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCC
Confidence            99999988864322 2467788999999999999864

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.29  E-value=3e-11  Score=107.74  Aligned_cols=135  Identities=17%  Similarity=0.221  Sum_probs=90.0

Q ss_pred             ccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCC-c-eeEEEeeecCCCceeEEEEEeecCCcccCCCCceeE
Q 027676           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-K-YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (220)
Q Consensus        18 ~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~-~-~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~   95 (220)
                      ...+++++||+|.|+|++++++||+++|||+++.....+.+ . ...+++..|    ...++|..+....+.        
T Consensus         6 ~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~--------   73 (393)
T 3isq_A            6 RGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNK--------   73 (393)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCH--------
T ss_pred             CCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCch--------
Confidence            34568999999999999999999999999999875432211 1 112222221    122333211000000        


Q ss_pred             EEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHH
Q 027676           96 FAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQE  175 (220)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~  175 (220)
                                         +.++                         .....+.|+.||||.|+|++++++++    ++
T Consensus        74 -------------------~~a~-------------------------fl~~hG~Gv~~iAf~VdDvdaa~~ra----~a  105 (393)
T 3isq_A           74 -------------------EMGD-------------------------HLVKHGDGVKDIAFEVEDCDYIVQKA----RE  105 (393)
T ss_dssp             -------------------HHHH-------------------------HHHHHCSEEEEEEEEEECHHHHHHHH----HH
T ss_pred             -------------------HHHH-------------------------HHHhcCCcEEEEEEEeCCHHHHHHHH----HH
Confidence                               0000                         00123668999999999999999999    79


Q ss_pred             cCCeeecCCcccCCC--CceEEEEECCCCCEEEEEechh
Q 027676          176 LGGKITRQPGSIPGL--NTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       176 ~G~~i~~~p~~~~~~--~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +|+++..+|...+.+  ..+.+.+++|.|..+.|+++..
T Consensus       106 ~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~  144 (393)
T 3isq_A          106 RGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMN  144 (393)
T ss_dssp             HTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             CCCeEecCccccccCCceeEEEEEEeCCCcEEEEecccc
Confidence            999999988654332  2377889999999999999654

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.28  E-value=4.6e-11  Score=105.83  Aligned_cols=135  Identities=15%  Similarity=0.203  Sum_probs=85.6

Q ss_pred             cCcceeeeEEEEEC--CHHHHHHHHHHhcCCEEEEeec-----CCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCC
Q 027676           19 KDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRD-----VPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGT   91 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~--Dle~s~~FY~~vLG~~~~~~~~-----~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~   91 (220)
                      ....+++|+++.|+  |++++++||+++|||++..+..     .+...+...++..+  .....++|........     
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~--~g~v~i~l~~~~~~~~-----  252 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG--TLKVKFPINEPALAKK-----  252 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT--TSCSEEEEEEECCSSS-----
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECC--CCcEEEEEecCCcCCC-----
Confidence            45689999999999  9999999999999999876521     12222233333211  1112222221100000     


Q ss_pred             ceeEEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCC-c---ccccCCceeeEEEEeCCHHHHHH
Q 027676           92 GFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-T---EYTKGNAYAQVAISTDDVYKSAE  167 (220)
Q Consensus        92 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~-~---~~~~~~g~~Hiaf~v~Dv~a~~~  167 (220)
                                                                       ..+ .   ....+.|++||||.|+|+.++++
T Consensus       253 -------------------------------------------------~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~  283 (381)
T 1t47_A          253 -------------------------------------------------KSQIDEYLEFYGGAGVQHIALNTGDIVETVR  283 (381)
T ss_dssp             -------------------------------------------------CCHHHHHHHHHTSCEEEEEEEECSCHHHHHH
T ss_pred             -------------------------------------------------ccHHHHHHHHhCCCCcceEEEecCCHHHHHH
Confidence                                                             000 0   01245689999999999999999


Q ss_pred             HHHHHHHHcCCeeecCCcccCC----------C------CceEEEEECCCCCEEEEEechhh
Q 027676          168 VVNLVTQELGGKITRQPGSIPG----------L------NTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       168 ~l~~~~~~~G~~i~~~p~~~~~----------~------~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      +|    +++|+++...|...-.          .      ...+.+-+||+|..++++...-+
T Consensus       284 ~L----~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~~~~  341 (381)
T 1t47_A          284 TM----RAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTKPVQ  341 (381)
T ss_dssp             HH----HHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBCCSS
T ss_pred             HH----HHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEeccCCC
Confidence            99    7999999887754210          0      01357779999998888876543

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.25  E-value=4.2e-11  Score=104.06  Aligned_cols=107  Identities=29%  Similarity=0.495  Sum_probs=87.2

Q ss_pred             CceeEEEEEeCc----------cccceEEEeecCC-----------CCceEEEEeeccCCCCceEEEEEEecCCcccccC
Q 027676           91 TGFGHFAIATED----------ALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKG  149 (220)
Q Consensus        91 ~~~~~~~~~~~~----------~~g~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~  149 (220)
                      ..+.|+++.|+|          ++|+++.+....+           +.+|.++++++++......++++.+.+..+...+
T Consensus        26 ~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~~  105 (330)
T 3zi1_A           26 RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLG  105 (330)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCBC
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCccccC
Confidence            367899999999          5899998766544           5688899999887777889999988766566667


Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +|+.||||.|+|+   .+++    +++|+++...|    +   ..+||+|||||.|||++..
T Consensus       106 ~g~~hiaf~V~d~---~~~l----~~~G~~~~~~~----~---~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          106 NDFMGITLASSQA---VSNA----RKLEWPLTEVA----E---GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             SSEEEEEEECHHH---HHHH----HHHTCCCEEEE----T---TEEEEECTTSCEEEEESSC
T ss_pred             CCeeEEEEECchH---HHHH----HHcCCceeccC----C---ceEEEECCCCCEEEEEecC
Confidence            8999999999986   4556    68999987554    2   4799999999999999975

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.17  E-value=1.5e-10  Score=101.48  Aligned_cols=60  Identities=17%  Similarity=0.220  Sum_probs=44.9

Q ss_pred             cCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeec-CCcc--------c-CCCC-------ceEEEEEC----CCCCEEE
Q 027676          148 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR-QPGS--------I-PGLN-------TKITSFVD----PDGWKTV  206 (220)
Q Consensus       148 ~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~-~p~~--------~-~~~~-------~~~~~~~D----PdG~~iE  206 (220)
                      .+.|++||||.|+|+++++++|    +++|+++.. .|..        . +.+.       ..+.+.+|    |+|+.|+
T Consensus       234 ~g~g~~HiAf~v~Di~~~~~~L----~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llq  309 (357)
T 1cjx_A          234 NGEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQ  309 (357)
T ss_dssp             TSSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEE
T ss_pred             CCCCeeEEEEEcCCHHHHHHHH----HHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEE
Confidence            4568999999999999999999    799999987 6621        1 1110       12467788    8899999


Q ss_pred             EEech
Q 027676          207 LVDNE  211 (220)
Q Consensus       207 lv~~~  211 (220)
                      ++...
T Consensus       310 ift~~  314 (357)
T 1cjx_A          310 IFSET  314 (357)
T ss_dssp             EEBCC
T ss_pred             EeccC
Confidence            88854

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.12  E-value=2.8e-09  Score=81.58  Aligned_cols=52  Identities=17%  Similarity=0.096  Sum_probs=43.2

Q ss_pred             eeEEEEeCC---HHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          153 AQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       153 ~Hiaf~v~D---v~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ..++|.|+|   +++++++|    . .|+++..+|...+.+ .+.++++||+|+.|+|...
T Consensus        83 ~~l~l~~~d~~evd~~~~~l----~-~Gg~v~~p~~~~~wg-~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           83 MSLYVTCETEEEIDTVFHKL----A-QDGAILMPLGSYPFS-KKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             SCEEEEESSHHHHHHHHHHH----H-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHH----H-cCCeEecCcccccCC-cEEEEEECCCCCEEEEEeC
Confidence            468999999   77777777    3 688999999887764 4789999999999999764

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.08  E-value=3.2e-09  Score=88.19  Aligned_cols=119  Identities=14%  Similarity=0.158  Sum_probs=77.7

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      ......-++.|+|.|++++++||+++|||++..+..      ..+.++.+  .....+.|...+....            
T Consensus         6 ~~~~~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~--~~~~~L~lEEsp~~~~------------   65 (244)
T 3e0r_A            6 VNQIVRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQ--TGLEKLVLEEAPSMRT------------   65 (244)
T ss_dssp             CCCEEEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECT--TCCEEEEEEECCTTTC------------
T ss_pred             ccceEEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecC--CCcceEEEEeCCCccc------------
Confidence            344667789999999999999999999999988742      35666542  2223344432211110            


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeE---EEEeCCHHHHHHHHHHHHHH
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV---AISTDDVYKSAEVVNLVTQE  175 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hi---af~v~Dv~a~~~~l~~~~~~  175 (220)
                                                                      ....|+-|+   ++.|+|-+++..-|     .
T Consensus        66 ------------------------------------------------~~~~Glkh~a~i~i~vp~~~el~~lL-----~   92 (244)
T 3e0r_A           66 ------------------------------------------------RKVEGRKKLARLIVKVENPLEIEGIL-----S   92 (244)
T ss_dssp             ------------------------------------------------BCCCSSCSEEEEEEEESSHHHHHHHH-----T
T ss_pred             ------------------------------------------------ccccccceeeeEEEEcCCHHHHHHHH-----h
Confidence                                                            112355566   59999977766666     3


Q ss_pred             cCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          176 LGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       176 ~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      ++.++..   ...+..++.+|+.||+||.||+....+-
T Consensus        93 ~~~~~~~---~~~gdhgyA~yl~dPEGn~ieiyae~d~  127 (244)
T 3e0r_A           93 KTDSIHR---LYKGQNGYAFEIFSPEDDLILIHAEDDI  127 (244)
T ss_dssp             TCSCCSE---EEECSSSEEEEEECTTCCEEEEECCSCG
T ss_pred             ccccccc---ccccCCcEEEEEECCCCCeEEEEEcCCH
Confidence            4555421   1112334789999999999999987654

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.08  E-value=1e-09  Score=98.78  Aligned_cols=36  Identities=22%  Similarity=0.279  Sum_probs=32.0

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeec
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD   54 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~   54 (220)
                      ....+++|+++.|+|++++++||+++|||++..+..
T Consensus       198 ~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~  233 (424)
T 1sqd_A          198 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFT  233 (424)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC
T ss_pred             CCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEc
Confidence            345799999999999999999999999999987653

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.07  E-value=4.1e-09  Score=80.66  Aligned_cols=52  Identities=13%  Similarity=0.091  Sum_probs=42.2

Q ss_pred             eeEEEEeCC---HHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          153 AQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       153 ~Hiaf~v~D---v~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ..+++.|+|   +++++++|    . .|+++..+|...+.+ .+.++|+||+|+.|+|..+
T Consensus        74 ~sl~~~~~d~~evd~~~~~l----~-~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGL----K-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHH----H-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEECCCHHHHHHHHHHH----h-CCCEEeecccccCCC-ceEEEEECCCCCEEEEeec
Confidence            358899998   55555655    5 799999999887653 5889999999999999985

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.06  E-value=8.6e-09  Score=81.83  Aligned_cols=53  Identities=19%  Similarity=0.092  Sum_probs=41.8

Q ss_pred             eEEEEe--------CCHHHHHHHHHHHHHHcC-CeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          154 QVAIST--------DDVYKSAEVVNLVTQELG-GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       154 Hiaf~v--------~Dv~a~~~~l~~~~~~~G-~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .+++.+        +|+++++++|    .+.| +++..+|...+.+ .+.++|+||+|+.|+|....
T Consensus       105 sl~l~~~~~d~~~~~dvd~~~~~l----~~~G~a~v~~p~~~~~wG-~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          105 SLLIDYDVNNKEDADKVEAFYEQI----KDHSSIEIELPFADQFWG-GKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             EEEEEEETTCHHHHHHHHHHHHHH----TTCTTCEEEEEEEECTTS-SEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEccCccCcHHHHHHHHHHH----HhCCCceEecCccccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            466777        4667777777    7888 6999999877654 47889999999999998753

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.05  E-value=1.5e-09  Score=95.18  Aligned_cols=124  Identities=13%  Similarity=0.131  Sum_probs=84.4

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      +.+.+++||.+.|+|++++++|| ++|||+++.+...    ...+++..+    ...+.+....+...      .     
T Consensus         8 ~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~----~~~~l~~~g----~~~l~l~~~~~~~~------~-----   67 (357)
T 1cjx_A            8 MGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRS----KNVHLYRQG----EINLILNNEPNSIA------S-----   67 (357)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESS----SSEEEEEET----TEEEEEECCSSSHH------H-----
T ss_pred             cccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCC----eeEEEEecC----CEEEEEECCCCchh------h-----
Confidence            56789999999999999999999 7999999876421    122333322    22333321100000      0     


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                         .+                         ....+.++.|+||.|+|++++++++    +++|+
T Consensus        68 -------------------~~-------------------------~~~~g~gv~~iaf~V~D~~~~~~~l----~~~G~   99 (357)
T 1cjx_A           68 -------------------YF-------------------------AAEHGPSVCGMAFRVKDSQKAYNRA----LELGA   99 (357)
T ss_dssp             -------------------HH-------------------------HHHHSSEEEEEEEEESCHHHHHHHH----HHTTC
T ss_pred             -------------------hh-------------------------hhhcCCeEEEEEEEeCCHHHHHHHH----HHcCC
Confidence                               00                         0123568999999999999999999    79999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++..+|.. + +......+++|+|..++|+++.+
T Consensus       100 ~~~~~~~~-~-g~~~~~~~~~~gg~~~~~vd~~~  131 (357)
T 1cjx_A          100 QPIHIDTG-P-MELNLPAIKGIGGAPLYLIDRFG  131 (357)
T ss_dssp             CBCCCCCC-T-TCBCCCEEECGGGCEEEEECCCS
T ss_pred             EEeecCCC-C-CcEEEEeeeCCCCeEEEEECCCC
Confidence            98777642 1 22356778999999999998753

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.01  E-value=3.3e-09  Score=94.54  Aligned_cols=35  Identities=11%  Similarity=0.064  Sum_probs=31.5

Q ss_pred             cCcceeeeEEEEECC--HHHHHHHHHHhcCCEEEEee
Q 027676           19 KDKRRFLHAVYRVGD--LDRTIKFYTECFGMKLLRKR   53 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~D--le~s~~FY~~vLG~~~~~~~   53 (220)
                      ..+.+++|+++.|+|  ++++++||+++|||+.....
T Consensus       169 ~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~  205 (393)
T 3isq_A          169 CSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSV  205 (393)
T ss_dssp             CCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccc
Confidence            456899999999998  99999999999999987764

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.01  E-value=2.3e-09  Score=96.22  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=31.6

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeec
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD   54 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~   54 (220)
                      ...+++|+++.|+|++++++||+++|||++..+..
T Consensus       196 ~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~  230 (418)
T 1sp8_A          196 GLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFT  230 (418)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEec
Confidence            45799999999999999999999999999987653

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=98.86  E-value=3.8e-08  Score=86.69  Aligned_cols=106  Identities=18%  Similarity=0.106  Sum_probs=74.8

Q ss_pred             CceeEEEEEeCc----------cccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC
Q 027676           91 TGFGHFAIATED----------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  160 (220)
Q Consensus        91 ~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~  160 (220)
                      .++.|++|.|+|          ++||++......      .++|.+.++..++.+.+..       ....++.|++|.|.
T Consensus        16 ~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~~------~~~lr~~~~~~~~~l~l~~-------~~~~gl~~~a~~v~   82 (365)
T 4ghg_A           16 LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDEN------QIYLRSFEEFIHHNLVLTK-------GPVAALKAMAFRVR   82 (365)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS------EEEEECTTCCSSCSEEEEE-------CSSCEEEEEEEEES
T ss_pred             CEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcCC------EEEEEeCCCCcceEEEecc-------CCCCCcceEEEEeC
Confidence            367899999999          589998876432      3455555544555565653       23458999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       161 Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      + .+.++++.++++++|+++...+.....+..+.++|+|||||.|||+..
T Consensus        83 s-~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~  131 (365)
T 4ghg_A           83 T-PEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFE  131 (365)
T ss_dssp             S-HHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             C-HHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEE
Confidence            8 344555555668999998876543322334789999999999999864

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.04  E-value=0.0003  Score=55.01  Aligned_cols=46  Identities=15%  Similarity=0.093  Sum_probs=32.4

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          154 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       154 Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .+++.|+|. +.++++.+++.+.|.++.           +...++||.|+.|.|..+.
T Consensus        79 sl~v~~~d~-~e~d~~~~~L~~~Gg~v~-----------~~G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           79 SFQVATDDQ-AETDRLWNAIVDNGGEES-----------ACGWCRDKWGISWQITPRV  124 (163)
T ss_dssp             EEEEEESSH-HHHHHHHHHHHHTTCEEC-----------STTEEECTTSCEEEEEEHH
T ss_pred             EEEEEeCCH-HHHHHHHHHHHhCCCEEE-----------EEEEEECCCCCEEEEEeEc
Confidence            588899983 333334344466788876           2247899999999999864

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.46  E-value=0.00016  Score=70.08  Aligned_cols=52  Identities=17%  Similarity=0.248  Sum_probs=41.7

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          154 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       154 Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      |++|.+.|++++.+.|    .+.+.++-..|.++   ....+|+.||+||+|+|.+..+
T Consensus        97 ~l~f~~~dL~~~~~~L----~~~~~~~Q~~ps~~---~~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           97 NIAFKSSSLSKLVKLL----KDGGHPVQQSPNEI---SPFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             EEEEEESCHHHHHHHH----HTTTCCCBCSSSSC---SCEEECCSSCCEEEECC-CCSS
T ss_pred             eEEEEeCCHHHHHHHH----HhcCCccccCCCcC---CCceEEeECCCCCEEEEeccCC
Confidence            9999999999999999    67888766555432   2367999999999999998765

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=95.78  E-value=0.027  Score=40.58  Aligned_cols=56  Identities=11%  Similarity=0.131  Sum_probs=41.2

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++.|+++.|.|++++.+..    ...|.++.......+....+.+++.. +|..||+++..
T Consensus         7 ~i~hv~i~v~Dl~~a~~FY----~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            7 KVHHIGYAVKNIDSALKKF----KRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CEEEEEEECSCHHHHHHHH----HHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeCEEEEEECCHHHHHHHH----HHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            6899999999999999988    46899886554323333345666655 57889999864

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=95.36  E-value=0.33  Score=40.72  Aligned_cols=50  Identities=8%  Similarity=0.118  Sum_probs=34.6

Q ss_pred             cCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC---CcccCCCC---ceEEEEECCC
Q 027676          148 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ---PGSIPGLN---TKITSFVDPD  201 (220)
Q Consensus       148 ~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~---p~~~~~~~---~~~~~~~DPd  201 (220)
                      .+.|+.|+||+++|+++..+++    .++|+.+..+   .+..|++.   -+.++..|+.
T Consensus       103 ~geGl~~~alrt~Di~a~~a~l----~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~  158 (274)
T 3p8a_A          103 YEQGFKNICLHTNDIEAVKNKL----QSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQD  158 (274)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHH----HTTTCEEEEEEEEEECCCC--CEEEEEEEEECSS
T ss_pred             cCCCeEEEEEecCCHHHHHHHH----HHcCCCcCCCccccccCCCCCEEEEEEEeccCCC
Confidence            4569999999999999999999    6888865422   12344443   2556667765

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=94.80  E-value=0.016  Score=48.03  Aligned_cols=32  Identities=3%  Similarity=-0.068  Sum_probs=29.2

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEe
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRK   52 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~   52 (220)
                      ...+++|+.|.|+|++++.+|| ++|||+...+
T Consensus       155 ~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          155 QLLSIGEINITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             GCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             HCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccC
Confidence            4579999999999999999999 9999998764

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=93.86  E-value=0.2  Score=36.58  Aligned_cols=59  Identities=20%  Similarity=0.290  Sum_probs=43.5

Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCC------CCceEEEEECCCCCEEEEEechh
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG------LNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~------~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      .++.||++.|.|++++.+...   .-.|.++...... +.      .....+++.-++|..|+|++..+
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   82 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYG---TILGLHELTDDEV-PATLTELVASGKVANFITPDGTILDLFGEPE   82 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHT---TTSCCEECCTTTS-CTTTHHHHHTTSEEEEECTTSCEEEEEECTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHH---hhcCCEEEeeccc-CcchhcccCCCcEEEEEeCCCCEEEEEecCC
Confidence            489999999999999999885   3489988753211 10      11245778888889999998755

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=93.30  E-value=0.27  Score=35.51  Aligned_cols=57  Identities=9%  Similarity=0.041  Sum_probs=42.1

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCC-----CEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG-----WKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG-----~~iElv~~~  211 (220)
                      ++.|+++.|.|++++.+...   ...|.++..... .+....+.+++..+++     ..|+|++..
T Consensus         9 ~~~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~   70 (148)
T 1jc4_A            9 CIDHVAYACPDADEASKYYQ---ETFGWHELHREE-NPEQGVVEIMMAPAAKLTEHMTQVQVMAPL   70 (148)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HHHCCEEEEEEE-ETTTTEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             eeeEEEEEeCCHHHHHHHHH---HccCceeeeccc-CCCCCeEEEEEEcCCCCcCcceEEEEeecC
Confidence            68899999999999999885   468998765422 2222235678887776     889999864

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=93.16  E-value=0.31  Score=33.70  Aligned_cols=52  Identities=17%  Similarity=0.307  Sum_probs=38.6

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++.|+++.|.|++++.+...   .-.|.++....    +.  ..+++..++|..|++.+..
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~----~~--~~~~~~~~~~~~l~l~~~~   54 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLE---KYFGLTCSGTR----GN--AFAVMRDNDGFILTLMKGK   54 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHH---HHHCCEEEEEE----TT--TEEEEECTTCCEEEEEECS
T ss_pred             eeEEEEEEeCCHHHHHHHHH---HhCCCEEeccC----CC--cEEEEEcCCCcEEEEEeCC
Confidence            57899999999999999885   45899876432    11  3466777778888888754

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=93.06  E-value=0.28  Score=34.42  Aligned_cols=59  Identities=12%  Similarity=0.062  Sum_probs=42.5

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      .+.|+++.|.|++++.+...   .-.|.++...... +......+++..++|..|+|++..+.
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~   61 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYV---TYFGATANDLYEN-KTKGFNSYFLSFEDGARLEIMSRTDV   61 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHH---HHHCCEECCCEEE-GGGTEEEEEEECSSSCEEEEEEETTC
T ss_pred             EEEEEEEEECCHHHHHHHHH---HhcCCeeeccccc-CCCCccEEEEEcCCCcEEEEEecCCC
Confidence            46799999999999999886   5679987654221 12223556777777999999987543

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=93.04  E-value=0.27  Score=36.50  Aligned_cols=59  Identities=15%  Similarity=0.171  Sum_probs=40.0

Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcc---------c---C-CCCceEEEEECCCCCEEEEEechh
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS---------I---P-GLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~---------~---~-~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      .++.|+++.|.|++++.+...   .-.|.++......         .   + ....+.+++.. .+..|||++..+
T Consensus        18 ~~i~Hv~i~V~Dle~a~~FY~---~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~~   89 (159)
T 3gm5_A           18 RNTVQIGIVVRDIEESLQNYA---EFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPDE   89 (159)
T ss_dssp             GGCEEEEEECSCHHHHHHHHH---HHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEECS
T ss_pred             ccccEEEEEeCCHHHHHHHHH---HhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEECC
Confidence            489999999999999999995   4589876532110         0   0 12235566654 467899998643

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=92.71  E-value=0.36  Score=35.08  Aligned_cols=56  Identities=16%  Similarity=0.270  Sum_probs=40.3

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcc----------cCCCCceEEEEECCCC-CEEEEEec
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS----------IPGLNTKITSFVDPDG-WKTVLVDN  210 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~----------~~~~~~~~~~~~DPdG-~~iElv~~  210 (220)
                      ++.|+++.|.|++++.+...   . .|.++......          .+....+.+++.-++| ..|||++.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~---~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFE---E-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---H-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHH---H-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            67899999999999999885   4 89987643210          0112336678887777 79999874

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=92.45  E-value=0.13  Score=42.48  Aligned_cols=47  Identities=9%  Similarity=-0.007  Sum_probs=30.3

Q ss_pred             ceeeEEEEeC--CHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          151 AYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       151 g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      |+..+-|.|+  |+.++.++|    ++.|+-+.       . ...++.+.||.|+.|=|.+
T Consensus       195 gLe~l~~~v~~~dl~~l~~~L----~~~g~~id-------k-k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          195 DLSMLKFLVNELDIASLRQKF----ESTEYFIP-------K-SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             SEEEEEEEESSCCHHHHHHHT----TTSCEECC-------T-TCCEEEEECTTSCEEEEEE
T ss_pred             CceEEEEEeCHHHHHHHHHHH----HhCCceEc-------c-cCCEEEEECCCCCEEEEEE
Confidence            4555666664  355566666    66766431       1 2267888999999998865

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=91.65  E-value=0.41  Score=33.57  Aligned_cols=54  Identities=22%  Similarity=0.179  Sum_probs=38.3

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      ++.|+++.|.|++++.+...   .-.|.++...... +......+++..++ ..|+|++
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~~-~~~~~~~~~~~~~~-~~l~l~~   58 (134)
T 3l7t_A            5 AVHHVALIVSDYDKSYEFYV---NQLGFEVIRENHR-PKRHDYKLDLKCGD-IELEIFG   58 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HTSCCEEEEEEEE-TTTTEEEEEEEETT-EEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHH---HhcCCEEEEEeec-CCCcceEEEEecCC-eEEEEEe
Confidence            68899999999999999885   4589988654322 22223456666544 4889888

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=91.32  E-value=0.77  Score=34.89  Aligned_cols=62  Identities=19%  Similarity=0.111  Sum_probs=44.8

Q ss_pred             cccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCC------------------CEEEE
Q 027676          146 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG------------------WKTVL  207 (220)
Q Consensus       146 ~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG------------------~~iEl  207 (220)
                      ....-.++|+++.|.|++++.+...   ...|.++...... +......+|+..+++                  ..||+
T Consensus        29 ~~~~~~l~Hv~l~v~D~~~a~~FY~---~~LG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l  104 (187)
T 3vw9_A           29 STKDFLLQQTMLRVKDPKKSLDFYT---RVLGMTLIQKCDF-PIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLEL  104 (187)
T ss_dssp             GGTTCEEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEEE-TTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEE
T ss_pred             ccceeEEEEEEEEeCCHHHHHHHHH---HhcCcEEeecccc-CCCceeEEEecCCCcccccccccchhhhcccCCceEEE
Confidence            3455689999999999999999986   5789987654322 233346677777764                  78999


Q ss_pred             Eech
Q 027676          208 VDNE  211 (220)
Q Consensus       208 v~~~  211 (220)
                      +...
T Consensus       105 ~~~~  108 (187)
T 3vw9_A          105 THNW  108 (187)
T ss_dssp             EEET
T ss_pred             EEec
Confidence            7653

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=91.31  E-value=0.48  Score=33.20  Aligned_cols=56  Identities=20%  Similarity=0.213  Sum_probs=39.1

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++.|+++.|.|++++.+...   .-.|.++..... .+....+.+++.. ++..+++++..
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~~   60 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYK---NILGAQVSEAVP-LPEHGVSVVFVNL-GNTKMELLHPL   60 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HTSCCEECCCEE-EGGGTEEEEEEEC-SSSEEEEEEEC
T ss_pred             eeeeEEEEeCCHHHHHHHHH---HhcCCEEeEeee-cCCCCEEEEEEec-CCEEEEEEecC
Confidence            57899999999999999885   348998764422 1222235566555 56889998753

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=90.82  E-value=1  Score=31.74  Aligned_cols=56  Identities=16%  Similarity=0.121  Sum_probs=38.6

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCC---CCEEEEEec
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD---GWKTVLVDN  210 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPd---G~~iElv~~  210 (220)
                      .+.|+++.|.|++++.+...   .-.|.++..... .+.+....+++.-++   +..|++.+.
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYT---KVLGMKLLRTSE-NPEYKYSLAFVGYGPETEEAVIELTYN   60 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEE-ETTTTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             cceEEEEEeCCHHHHHHHHH---hccCcEEEEecc-cCCCceEEEEEecCCCCCCcEEEEEEc
Confidence            36799999999999999885   358998765432 122222456666554   788998864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=90.77  E-value=0.39  Score=35.88  Aligned_cols=56  Identities=14%  Similarity=0.108  Sum_probs=39.8

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++.||++.|.|++++.+...   .-.|.++..... .+....+.+++.. .+..|||++..
T Consensus         8 ~i~Hv~l~V~Dl~~a~~FY~---~~LG~~~~~~~~-~~~~~~~~~~~~~-g~~~l~l~~~~   63 (161)
T 3oa4_A            8 KLDHIGIAVTSIKDVLPFYV---GSLKLKLLGMED-LPSQGVKIAFLEI-GESKIELLEPL   63 (161)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HTSCCEEEEEEE-EGGGTEEEEEEEE-TTEEEEEEEES
T ss_pred             cCCEEEEEECCHHHHHHHHH---HccCCeEeeeec-cCCCCeEEEEEeC-CCeEEEEEeEC
Confidence            78999999999999999985   348988765322 1222335666665 45789998864

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=89.01  E-value=1  Score=32.55  Aligned_cols=57  Identities=18%  Similarity=0.114  Sum_probs=39.6

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCC---CCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD---GWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPd---G~~iElv~~~  211 (220)
                      ++.|+++.|.|++++.+...   ...|.++..... .+.+....+++.-++   +..|+|++..
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~l~l~~~~   67 (144)
T 2c21_A            8 RMLHTMIRVGDLDRSIKFYT---ERLGMKVLRKWD-VPEDKYTLVFLGYGPEMSSTVLELTYNY   67 (144)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEE-EGGGTEEEEEEESSCTTTSCEEEEEEET
T ss_pred             eeEEEEEEeCCHHHHHHHHH---hcCCCEEEEeee-cCCCCeEEEEEEcCCCCCceEEEEEecC
Confidence            68899999999999999885   458998765321 112222446666554   5889998764

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=88.88  E-value=0.69  Score=32.09  Aligned_cols=55  Identities=15%  Similarity=0.124  Sum_probs=36.7

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ++.|+++.|.|++++.+...   .-.|.++...... +......+++.-+++ .|+|++.
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~---~~lG~~~~~~~~~-~~~~~~~~~~~~~~~-~l~l~~~   59 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYV---EKLGFEVLRENHR-PEKNDIKLDLKLGSQ-ELEIFIS   59 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHT---TTTCCEEEEEEEE-GGGTEEEEEEEETTE-EEEEEEC
T ss_pred             ccceEEEEeCCHHHHHHHHH---HhcCCEEEeeccC-CCCcceEEEEecCCe-EEEEEec
Confidence            67899999999999999884   3489987643211 111223344555555 8888874

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=87.66  E-value=1.9  Score=31.29  Aligned_cols=53  Identities=17%  Similarity=0.155  Sum_probs=36.7

Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEE-ECCCCCEEEEEec
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSF-VDPDGWKTVLVDN  210 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~-~DPdG~~iElv~~  210 (220)
                      .++.|+++.|.|++++.+...   .-.|.++.....   ..  ..+++ .+..+..|++.+.
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~---~~LG~~~~~~~~---~~--~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYT---EILGFEAGLLDS---AR--RWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHH---HTSCCEEEEEET---TT--TEEEEEETTTTEEEEEEEC
T ss_pred             ceecEEEEEeCCHHHHHHHHH---HhcCCEEEEecC---CC--cEEEEEecCCCcEEEEecc
Confidence            379999999999999999885   458998765431   11  23333 3445677777764

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=87.50  E-value=1.6  Score=30.56  Aligned_cols=56  Identities=16%  Similarity=0.084  Sum_probs=38.4

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCC-CCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD-GWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPd-G~~iElv~~~  211 (220)
                      ++.|+++.|.|++++.+...   ...|.++......-++  ...+.+..++ +..|++.+..
T Consensus        13 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~l~l~~~~   69 (133)
T 4hc5_A           13 YVHSATIIVSDQEKALDFYV---NTLGFEKVFDNQLDPN--MRFVTVVPPGAQTQVALGLPS   69 (133)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEEEETT--EEEEEEECTTCSCEEEEECGG
T ss_pred             ceeEEEEEECCHHHHHHHHH---hCcCCcEeeecccCCC--ceEEEEECCCCceEEEEecCc
Confidence            78899999999999999885   4689988754321111  2445555554 4568877754

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=87.18  E-value=1.6  Score=31.07  Aligned_cols=56  Identities=14%  Similarity=0.104  Sum_probs=37.0

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++.|+++.|.|++++.+...   .-.|.++...... +.+....+++ . +|..|+|++..+
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~---~~lG~~~~~~~~~-~~~~~~~~~~-~-~~~~l~l~~~~~   60 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYT---EILDWKELVRGRG-DTTSFAHGVL-P-GGLSIVLREHDG   60 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HHHCCEEEEEEEC-SSEEEEEEEC-T-TSCEEEEEEETT
T ss_pred             cccEEEEEeCCHHHHHHHHH---HhcCCEEEeeccC-CCCceEEEEE-c-CCCEEEEEeCCC
Confidence            57899999999999999885   3579987644321 1111122333 3 778889887643

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=86.76  E-value=2.2  Score=32.24  Aligned_cols=59  Identities=17%  Similarity=0.115  Sum_probs=40.4

Q ss_pred             CCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCC------------------CCEEEEEec
Q 027676          149 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD------------------GWKTVLVDN  210 (220)
Q Consensus       149 ~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPd------------------G~~iElv~~  210 (220)
                      ..++.|+++.|.|++++.+...   .-.|.++...... ++.....+++..++                  |..|+|++.
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~---~~LG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~  104 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYT---RVLGLTLLQKLDF-PAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHN  104 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEEE-GGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             ceeEEEEEEEeCCHHHHHHHHH---HhcCCEEEEeccC-CCCCceeEEecccccccCCcccchheeeecCCCceEEEEec
Confidence            4589999999999999999885   3589987654321 12122345566553                  679999875


Q ss_pred             h
Q 027676          211 E  211 (220)
Q Consensus       211 ~  211 (220)
                      .
T Consensus       105 ~  105 (184)
T 2za0_A          105 W  105 (184)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=84.65  E-value=3.1  Score=29.65  Aligned_cols=52  Identities=23%  Similarity=0.205  Sum_probs=37.0

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++.|+++.|.|++++.+...    +.|.++.....   ..  ..+.+.-++|..|++.+..
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~----~LG~~~~~~~~---~~--~~~~~~~~~~~~l~l~~~~   55 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYR----KLGVEIPAEAD---SA--PHTEAVLDGGIRLAWDTVE   55 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHH----TTTCCCCGGGG---GC--SEEEEECTTSCEEEEEEHH
T ss_pred             eeeEEEEEECCHHHHHHHHH----HcCCcEEecCC---CC--ceEEEEcCCCeEEEEecCc
Confidence            57899999999999999884    48988764321   11  2444555678888888754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=84.64  E-value=2.9  Score=30.66  Aligned_cols=52  Identities=21%  Similarity=0.197  Sum_probs=37.1

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++.|+++.|.|++++.+...   .-.|.++....   +    ..+++.-++|..|.+.....
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~---~vLG~~~~~~~---~----~~~~~~~~~g~~l~l~~~~~   57 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYK---NLLDTQPIESS---P----TFAMFVMKTGLRLGLWAQEE   57 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHH---HHHTCCCSEEC---S----SEEEEECTTSCEEEEEEGGG
T ss_pred             cccEEEEEeCCHHHHHHHHH---HHcCCEEeccC---C----CEEEEEcCCCcEEEEecCCc
Confidence            57899999999999999885   34898865331   1    34566666788888876543

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=84.56  E-value=18  Score=35.50  Aligned_cols=52  Identities=21%  Similarity=0.165  Sum_probs=35.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ...+.|.+.|+....+.|    .+..++  .-|..+   ....+|..||=||.|-|....+
T Consensus       124 ~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~---~~~~~~~~dp~~~~~~~~~~~~  175 (989)
T 3opy_A          124 PGEVTFFTASIDKLKAKL----IEIGAE--IIPSKI---DLVEFSTRDPMGDVISFSSYPS  175 (989)
T ss_dssp             SCEEEEECSCHHHHHHHH----HHSSCC--BCCCC-----CCCEEEESSSEEEEECCSSSC
T ss_pred             cceEEEEeCcHHHHHHHh----hhcccc--cCCCCC---CceeEEEecCCCCEEeeecCCC
Confidence            457999999999999999    344222  122221   1246999999999999876543

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=84.43  E-value=2.9  Score=30.43  Aligned_cols=52  Identities=13%  Similarity=0.129  Sum_probs=37.5

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      ++.|++|.|.|++++.+...   .-.|.++....    .   ..+++.. +|..|+|++....
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~---~~LG~~~~~~~----~---~~~~~~~-~~~~l~l~~~~~~   56 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYG---EGFGWAPVFRN----P---EIIFYQM-NGFVLATWLVQNL   56 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHH---HTSCCCCSEEC----S---SEEEEEC-SSSEEEEEEHHHH
T ss_pred             ceEEEEEEcCCHHHHHHHHH---HhcCCEeecCC----C---CEEEEEc-CCEEEEEEecccc
Confidence            57899999999999999884   34898765432    1   3455554 6788999886543

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=83.47  E-value=2.7  Score=29.80  Aligned_cols=51  Identities=8%  Similarity=0.009  Sum_probs=34.9

Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .++.|+++.|.|++++.+...   .-.|.++....   +    ..+.+...+|..|.|.+.
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~---~~lG~~~~~~~---~----~~~~~~~~~~~~l~l~~~   62 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYR---FIFKKEPVFVT---P----RYVAFPSSGDALFAIWSG   62 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHH---HHHTCCCSEEC---S----SEEEEECSTTCEEEEESS
T ss_pred             ceeeEEEEEECCHHHHHHHHH---HHcCCeEEEcC---C----CEEEEEcCCCcEEEEEeC
Confidence            378999999999999999885   35788764321   1    234455556667776654

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=83.26  E-value=3.6  Score=29.89  Aligned_cols=52  Identities=21%  Similarity=0.081  Sum_probs=37.2

Q ss_pred             CceeeEEEEeCCHHHHHHHH---HHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          150 NAYAQVAISTDDVYKSAEVV---NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l---~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      .++.|+++.|.|++++.+..   .   ...|.++.....   .   ...|+.  +|..|+|++..+
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~---~~LG~~~~~~~~---~---~~~~~~--g~~~l~l~~~~~   73 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLL---GELGYEDYQSWS---R---GKSYKH--GKTYLVFVQTED   73 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHH---HHTTCEEEEEET---T---EEEEEE--TTEEEEEEECCG
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhh---hhCCCEEEEecC---C---CceEec--CCeEEEEEEcCC
Confidence            48999999999999998887   5   578998764321   2   123445  567888887643

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=82.62  E-value=4.1  Score=28.99  Aligned_cols=30  Identities=3%  Similarity=0.152  Sum_probs=24.8

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      ++.|+++.|.|++++.+...   .-.|.++...
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~---~~LG~~~~~~   33 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILE---GVFDAREVYA   33 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HHHCCEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHH---HhhCCEEeec
Confidence            57899999999999999885   4589987654

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=82.35  E-value=3.1  Score=30.22  Aligned_cols=51  Identities=20%  Similarity=0.173  Sum_probs=35.9

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++.|++|.|.|++++.+...   +-.|.++....   +    ..+++.-++|..|+|.+..
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~---~~LG~~~~~~~---~----~~~~~~~~~~~~l~l~~~~   75 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYK---ALLGVDPVESS---P----TFSLFVLANGMKLGLWSRH   75 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHH---HHHTCCCSEEE---T----TEEEEECTTSCEEEEEETT
T ss_pred             ceeEEEEEeCCHHHHHHHHH---HccCCEeccCC---C----CeEEEEcCCCcEEEEEeCC
Confidence            78999999999999999885   34798765321   1    1345555557778877654

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=81.52  E-value=4.8  Score=28.14  Aligned_cols=30  Identities=7%  Similarity=0.204  Sum_probs=24.3

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      ++.|+++.|.|++++.+...   .-.|.++...
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~   33 (133)
T 2p7o_A            4 GLSHITLIVKDLNKTTAFLQ---NIFNAEEIYS   33 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HHHCCEECC-
T ss_pred             eEEEEEEEcCCHHHHHHHHH---HhcCCEEeee
Confidence            57899999999999999885   3589987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	220
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-11
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-05
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-11
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	5e-09
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-10
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	2e-07
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	3e-07
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	3e-07
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	4e-07
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	5e-07
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	1e-06
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-06
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	3e-06
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-04
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	3e-06
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-05
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	2e-05
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	2e-05
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	4e-05
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-04
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	3e-04
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	5e-04
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	6e-04
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	7e-04
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	7e-04
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	8e-04
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	0.001
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	0.002

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 57.8 bits (138), Expect = 2e-11
 Identities = 50/75 (66%), Positives = 58/75 (77%)

Query: 22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
          RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 2  RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 82 YGVTSYDIGTGFGHF 96
          YGVTSY     +GH 
Sbjct: 62 YGVTSYKHDEAYGHI 76

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 40.8 bits (94), Expect = 2e-05
 Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 93  FGHFAIATED----------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 142
             H  I   D           LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYG
Sbjct: 4   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 63

Query: 143 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 202
           VT Y    AY  +AI  +DV +    +    ++    I  +       +  +   VDPDG
Sbjct: 64  VTSYKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDG 114

Query: 203 WKTVLVDNEDFLKE 216
           +   L++ +  +++
Sbjct: 115 YYIELLNEKTMMEK 128

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 57.4 bits (137), Expect = 2e-11
 Identities = 44/79 (55%), Positives = 58/79 (73%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATE 101
           GV  Y++GT +GH A++ +
Sbjct: 62  GVDKYELGTAYGHIALSVD 80

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 50.8 bits (120), Expect = 5e-09
 Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 14/135 (10%)

Query: 93  FGHFAIATED----------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 142
             H  +   D           LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 143 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 202
           V +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDG 118

Query: 203 WKTVLVDNEDFLKEI 217
           +K  L++ +D  + +
Sbjct: 119 YKIELIEEKDAGRGL 133

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (134), Expect = 1e-10
 Identities = 33/186 (17%), Positives = 58/186 (31%), Gaps = 41/186 (22%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
                + RV D  +++ FYT   GM L++K D P  K+S  FL +  +            
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDI--------- 73

Query: 83  GVTSYDIGTGFGHFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 142
                         A A      ++L       + +      G ++              
Sbjct: 74  ------PKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSD-------------- 113

Query: 143 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 202
                    +  + I+  DV           +ELG K  ++P    G    +    DPDG
Sbjct: 114 ------PRGFGHIGIAVPDV----YSACKRFEELGVKFVKKPD--DGKMKGLAFIQDPDG 161

Query: 203 WKTVLV 208
           +   ++
Sbjct: 162 YWIEIL 167

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 2e-07
 Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 8/94 (8%)

Query: 17  PKKDKRRFL---HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           PK ++ RFL      + VG+  +   FY    G + L  + +               +  
Sbjct: 2   PKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYNYGVTSYDI-----GTGFGHFAIATED 102
           FV+    N             G G    A   ED
Sbjct: 62  FVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVED 95

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 46.8 bits (110), Expect = 3e-07
 Identities = 17/107 (15%), Positives = 29/107 (27%), Gaps = 20/107 (18%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           P+ D+     F H      D       ++   G  L  + D+     ++A L        
Sbjct: 4   PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLS 63

Query: 74  FVVELTYNYGVTSYDI-----------------GTGFGHFAIATEDA 103
           F+    Y +G  +                    G      A+   DA
Sbjct: 64  FLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADA 110

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 46.1 bits (108), Expect = 3e-07
 Identities = 12/61 (19%), Positives = 18/61 (29%)

Query: 23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
          RF HA+    +L  T   +T+  G  L  +           FL    +            
Sbjct: 5  RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEK 64

Query: 83 G 83
          G
Sbjct: 65 G 65

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 45.8 bits (107), Expect = 4e-07
 Identities = 6/83 (7%), Positives = 19/83 (22%), Gaps = 2/83 (2%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H      + +    FY    G++ ++     ++             S       + 
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 82  YGVT--SYDIGTGFGHFAIATED 102
             +   +Y          +    
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPS 87

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 45.6 bits (107), Expect = 5e-07
 Identities = 16/89 (17%), Positives = 26/89 (29%), Gaps = 8/89 (8%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +     V+ VG+  +   +Y+  FGM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 82  YGVTSYDI--------GTGFGHFAIATED 102
                           G G    AI   D
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEVPD 94

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.4 bits (104), Expect = 1e-06
 Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 26/113 (23%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           PK DK   +RF H  +  GD     + ++   GM+   K D+      +A          
Sbjct: 3   PKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLR 62

Query: 74  FVVELTYNYGVTSYDIG-----------------------TGFGHFAIATEDA 103
           F+    Y+  +++ +I                         G    AI  EDA
Sbjct: 63  FLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDA 115

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 1/85 (1%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H      D+ R   +  E  G ++       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 83  GVTSYDIGTGFGHFAIATEDALGMK 107
            +      T   H  I   D +G  
Sbjct: 64  RMHHVAFATHEKHNIIQICDKMGAL 88

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 43.0 bits (100), Expect = 3e-06
 Identities = 16/88 (18%), Positives = 21/88 (23%), Gaps = 5/88 (5%)

Query: 23  RFLHAVYRV----GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVEL 78
            F  A  R+    G LD  I+FY E   +K +         Y     G      H     
Sbjct: 5   SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIG-EFSQHNGYDGVMFGLPHADYHLEFTQ 63

Query: 79  TYNYGVTSYDIGTGFGHFAIATEDALGM 106
                            F +     L  
Sbjct: 64  YEGGSTAPVPHPDSLLVFYVPNAVELAA 91

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 38.0 bits (87), Expect = 2e-04
 Identities = 11/111 (9%), Positives = 33/111 (29%), Gaps = 6/111 (5%)

Query: 101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 160
           E+ L +K +    +      +       +      +             +       +  
Sbjct: 28  EEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAV 87

Query: 161 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 211
           ++      +    + +G +        P  +    +  DPDGW+ V ++++
Sbjct: 88  ELAAITSKL----KHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFMNSK 132

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 44.2 bits (104), Expect = 3e-06
 Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 10/94 (10%)

Query: 22  RRFLHAVYRV--GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELT 79
           +   H  + V  G +     FY + F  +  R  D+  E                 + L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 80  YNYGVTSYDIG--------TGFGHFAIATEDALG 105
                 +  I          G  H A  T+D + 
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVK 97

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 41.5 bits (96), Expect = 1e-05
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRK 52
           K   R  H   RV D+ + ++ Y E  G+  + +
Sbjct: 2  NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDR 36

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 41.1 bits (95), Expect = 2e-05
 Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 1/57 (1%)

Query: 22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN-AFLGFGPEQSHFVVE 77
              H  + V DL+R  +     F  + +   D  +   S   F   G      +  
Sbjct: 3  EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQG 59

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 41.3 bits (96), Expect = 2e-05
 Identities = 15/80 (18%), Positives = 24/80 (30%), Gaps = 6/80 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +        V  LD+     TE FG   + + D        A       ++   + + Y 
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYL 64

Query: 82  YGVTSYDIGTGFGHFAIATE 101
            G T         H AI  +
Sbjct: 65  DGPTEKPGRGSIHHLAIRVK 84

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 40.9 bits (95), Expect = 4e-05
 Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 13/95 (13%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD-----VPEEKYSNAFLGFGPEQSHFVV 76
            RF H V  V +L     ++    G     +         E   ++  L    E     +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 77  -ELTYNYGVTS-------YDIGTGFGHFAIATEDA 103
            E  +     S       +  G G  H A+A++D 
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDV 102

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 37.7 bits (86), Expect = 2e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 26 HAVYRVGDLDRTIKFYTECFGMKLLRK 52
          H    V DL +++ F+ E  G+ L  +
Sbjct: 7  HLTLAVSDLQKSVTFWHELLGLTLHAR 33

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 37.0 bits (84), Expect = 3e-04
 Identities = 6/25 (24%), Positives = 10/25 (40%)

Query: 26 HAVYRVGDLDRTIKFYTECFGMKLL 50
          H    V D+    +F  + FG+   
Sbjct: 6  HLNLTVADVVAAREFLEKYFGLTCS 30

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 36.9 bits (84), Expect = 5e-04
 Identities = 9/38 (23%), Positives = 18/38 (47%)

Query: 17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD 54
          P  D  R  +    V DL ++ +FY +  G+ +  + +
Sbjct: 10 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE 47

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.8 bits (84), Expect = 6e-04
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRK 52
              H    V DL  +I FY +  G +L  +
Sbjct: 3  TGLNHLTLAVADLPASIAFYRDLLGFRLEAR 33

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 36.5 bits (83), Expect = 7e-04
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 10/87 (11%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV--ELTYNYG 83
           H  Y   D D   K+Y E FG   L + + PE+      +    + +  +   ++     
Sbjct: 10  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 69

Query: 84  VTS--------YDIGTGFGHFAIATED 102
             S        ++   G  H A   +D
Sbjct: 70  DESTVAKWLAKHNGRAGLHHMAWRVDD 96

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 36.1 bits (82), Expect = 7e-04
 Identities = 6/27 (22%), Positives = 11/27 (40%)

Query: 22 RRFLHAVYRVGDLDRTIKFYTECFGMK 48
           R  +  + V D+     F T+  G+ 
Sbjct: 3  ERLGYLGFAVKDVPAWDHFLTKSVGLM 29

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 36.1 bits (82), Expect = 8e-04
 Identities = 7/33 (21%), Positives = 12/33 (36%)

Query: 22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD 54
          R   +  + V D+     F T+  G+      D
Sbjct: 3  RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD 35

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 23/126 (18%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF------VVELT 79
             V   G ++  + FY +  G   +++    +     + L               + E  
Sbjct: 12  GNVEL-GRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPA 70

Query: 80  YNYGVT------SYDIGTGFGHFAIATEDAL---------GMKLLRTVDKPEYKYTLAML 124
                +       +  G G  H A+ T D +         G++ L T D   Y      +
Sbjct: 71  LAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDS-YYDTLGEWV 129

Query: 125 GYAEED 130
           G     
Sbjct: 130 GDTRVP 135

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 11/40 (27%), Positives = 16/40 (40%)

Query: 26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL 65
          H V  V D  + + FYTE  G  L    D+     ++   
Sbjct: 13 HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPA 52

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	220
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.87
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.86
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.84
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.83
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.8
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.79
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.79
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.78
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.77
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.77
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.76
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.76
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.75
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.75
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.75
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.74
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.74
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.72
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.72
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.7
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.69
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.68
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.67
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.65
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.56
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.54
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.51
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.49
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.36
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.26
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.21
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.08
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.05
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.04
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.87
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.64
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.2
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.9
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	95.19
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	94.56
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	94.19
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	93.68
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	92.42
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	91.84
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	91.76
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	90.91
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	89.07
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	86.15
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	85.57
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	85.45
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	83.32
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	82.81
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	81.17
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	80.83

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=2.5e-21  Score=143.29  Aligned_cols=133  Identities=46%  Similarity=0.837  Sum_probs=92.1

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      ||+.|++|+|+|+++|++||+++|||++..+...+.+.+....+........                            
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------   52 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEE----------------------------   52 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTS----------------------------
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeec----------------------------
Confidence            6899999999999999999999999999887655544443333322110000                            


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                                     ...+..............+..|+++.+++++++.+++    +++|..+.
T Consensus        53 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~   97 (135)
T d1f9za_          53 -------------------------------AVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVT   97 (135)
T ss_dssp             -------------------------------CEEEEEEETTCCCCCCCSSEEEEEEECSCHHHHHHHH----HHTTCEEE
T ss_pred             -------------------------------cccccccccccccccccccceeeccchHHHHHHHHHH----HHcCCCee
Confidence                                           0000111111112334558899999999999999999    79999999


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEechhhhhhh
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEI  217 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~~~~~  217 (220)
                      .+|...+.+..+++||+|||||.|||+|+.+..+++
T Consensus        98 ~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~  133 (135)
T d1f9za_          98 REAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  133 (135)
T ss_dssp             EEEEECTTSCCEEEEEECTTSCEEEEEEC-------
T ss_pred             cCCccccCCCeEEEEEECCCCCEEEEEECCCccccC
Confidence            988877776678899999999999999998876654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.86  E-value=5.4e-21  Score=144.88  Aligned_cols=141  Identities=18%  Similarity=0.289  Sum_probs=90.7

Q ss_pred             eccccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCcee
Q 027676           15 EWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFG   94 (220)
Q Consensus        15 ~~~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~   94 (220)
                      ++++..+++++|++|.|+|+++|++||++ |||++..+..... .+...+.+..  ..+  ..                 
T Consensus         1 ~m~~~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~-~~~~~~~~~~--~~~--~~-----------------   57 (149)
T d1ss4a_           1 AMAKNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEG-EWAGRVTGLG--SQC--VE-----------------   57 (149)
T ss_dssp             CCTTCCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECS-HHHHHHHSCC--SCE--EE-----------------
T ss_pred             CCCCCCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccce-eeeeeeeccC--CCc--ee-----------------
Confidence            35667789999999999999999999998 9999887643221 1111111110  000  00                 


Q ss_pred             EEEEEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEec---CCc----ccccCCceeeEEEEeCCHHHHHH
Q 027676           95 HFAIATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY---GVT----EYTKGNAYAQVAISTDDVYKSAE  167 (220)
Q Consensus        95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~---~~~----~~~~~~g~~Hiaf~v~Dv~a~~~  167 (220)
                                                .+++....  ....+++....   +..    ......|+.|+||.|+|++++++
T Consensus        58 --------------------------~~~l~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~  109 (149)
T d1ss4a_          58 --------------------------IAMMVTPD--GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVS  109 (149)
T ss_dssp             --------------------------EEEEECTT--SSCEEEEEEEEESCCCCBCTTCCSSSBEEEEEEEEESCHHHHHH
T ss_pred             --------------------------EEEEeecc--cceEEEEEeeccccCcccccccCCCCcceeEEEEeechhHHHHH
Confidence                                      00010000  01112221110   100    11234589999999999999999


Q ss_pred             HHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          168 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       168 ~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +|    +++|+++..+|...++ ..+.+|++||||+.|||+|+.
T Consensus       110 ~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~~  148 (149)
T d1ss4a_         110 RL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEEL  148 (149)
T ss_dssp             HH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEEC
T ss_pred             HH----HHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEcc
Confidence            99    7999999988876554 347899999999999999874

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.7e-20  Score=144.29  Aligned_cols=146  Identities=21%  Similarity=0.369  Sum_probs=96.1

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcc-cCCCCceeEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFA   97 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~~~~~~~   97 (220)
                      ....+++|++|+|+|+++|++||+++|||+++.+...+.+++..++...+.....  +...   .... ...+.....  
T Consensus        19 ~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~--   91 (176)
T d1qipa_          19 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDI--PKEK---DEKIAWALSRKATL--   91 (176)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGS--CSSH---HHHHHHHTTSSSEE--
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCcccc--cccc---ccccccccccccce--
Confidence            4457899999999999999999999999999988777777777777654321000  0000   0000 000000000  


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEec--CC-c----ccccCCceeeEEEEeCCHHHHHHHHH
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--GV-T----EYTKGNAYAQVAISTDDVYKSAEVVN  170 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~--~~-~----~~~~~~g~~Hiaf~v~Dv~a~~~~l~  170 (220)
                                                          .+......  .. .    ......|+.|+||.++|+++++++| 
T Consensus        92 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l-  134 (176)
T d1qipa_          92 ------------------------------------ELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF-  134 (176)
T ss_dssp             ------------------------------------EEEEETTGGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHH-
T ss_pred             ------------------------------------eEEEeeccccccCcCccCCCCCccceeEEEeeHHHHHHHHHHH-
Confidence                                                00000000  00 0    1123349999999999999999999 


Q ss_pred             HHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          171 LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       171 ~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                         +++|+++..+|...++  .+++||+|||||+|||+|+...
T Consensus       135 ---~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_         135 ---EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             ---HHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTTG
T ss_pred             ---HHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCCC
Confidence               7899999999876333  3678999999999999998655

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.83  E-value=1.4e-19  Score=140.59  Aligned_cols=126  Identities=17%  Similarity=0.156  Sum_probs=87.6

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      |..++++||+|+|+|+++|++||+++|||+++.+...+.......++..+.  .....                      
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----------------------   56 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLST--KAHDV----------------------   56 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSS--BSCSE----------------------
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccc--ccccc----------------------
Confidence            355789999999999999999999999999988765554444434433211  00000                      


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                             ....                    ....++++|++|.+.+++ .+..+.+++++.|+
T Consensus        57 -----------------------~~~~--------------------~~~~~~~~h~~~~~~~~~-~~~~~~~~L~~~gv   92 (162)
T d1mpya2          57 -----------------------AFIH--------------------HPEKGRLHHVSFHLETWE-DLLRAADLISMTDT   92 (162)
T ss_dssp             -----------------------EEEE--------------------CSSSSEEEEEEEECSCHH-HHHHHHHHHHHHTC
T ss_pred             -----------------------cccc--------------------cCCCCccceeEEEEeeeh-hhhhHHHHHHHcCC
Confidence                                   0000                    112347899999999864 33334445589999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++..+|.....+..+++||+|||||.|||++..+
T Consensus        93 ~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          93 SIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             CEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             ccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            9988887654445588999999999999998643

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=5.2e-19  Score=133.74  Aligned_cols=130  Identities=14%  Similarity=0.165  Sum_probs=80.7

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCc-eeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK-YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      .+.+++||+|.|+|+++|++||+++|||+++.+....+.. ....+.+.+....+..+.                     
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------------------   61 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELS---------------------   61 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEE---------------------
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEe---------------------
Confidence            5689999999999999999999999999998765322211 111111111101111111                     


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcc-cccCCceeeEEEEeCCHHHHHHHHHHHHHHcC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDDVYKSAEVVNLVTQELG  177 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G  177 (220)
                                                            +....+..+ ....++++|+||.|+|. +.++.+.+++++.|
T Consensus        62 --------------------------------------~~~~~~~~~~~~~~~~~~Hiaf~v~~~-~~l~~~~~~l~~~g  102 (144)
T d1zswa1          62 --------------------------------------FFEIPLVGRTYRGTNAITRIGLLVPSE-DSLHYWKERFEKFD  102 (144)
T ss_dssp             --------------------------------------EEECTTCCBCBCCBSEEEEEEEEESCH-HHHHHHHHHHHHTT
T ss_pred             --------------------------------------ecccccccCCccCCCceeEEEEecCCc-hhHHHHhhhhhccc
Confidence                                                  111111111 12234689999999994 33333444458999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++..+ ...  ...+.+||+|||||.|||++..+
T Consensus       103 v~~~~~-~~~--~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1         103 VKHSEM-TTY--ANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             CEECCS-EEE--TTEEEEEEECTTCCEEEEEECTT
T ss_pred             eeeeCc-ccc--CCeEEEEEECCCCCEEEEEEeCC
Confidence            987443 332  23478999999999999998754

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.80  E-value=2.8e-19  Score=131.12  Aligned_cols=114  Identities=17%  Similarity=0.093  Sum_probs=83.3

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      |+++|+.|.|+|+++|++||+++||+++....+    .+  +++..|    ...+.|....+..                
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~--~~~~~g----~~~l~l~~~~~~~----------------   54 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG----SHCLMLSQNHLVP----------------   54 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET----TEEEEEESSCSSS----------------
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----Ce--EEEEEc----CceeeeeecccCC----------------
Confidence            589999999999999999999999999865421    22  334332    1233332211100                


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                                                  ....+.-.|++|.|+|++++++++    +++|+++.
T Consensus        55 --------------------------------------------~~~~~~~~~~~f~v~D~d~~~~~l----~~~G~~i~   86 (115)
T d2i7ra1          55 --------------------------------------------LENFQSGIIIHIEVEDVDQNYKRL----NELGIKVL   86 (115)
T ss_dssp             --------------------------------------------CCCCCSCEEEEEECSCHHHHHHHH----HHHTCCEE
T ss_pred             --------------------------------------------CCCCCcceEEEEEECCHHHHHHHH----Hhhccccc
Confidence                                                        011122347999999999999999    78999999


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .+|...|.+ .+.+||+|||||.|||++.
T Consensus        87 ~~~~~~~~g-~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          87 HGPTVTDWG-TESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             EEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             cceEEeeCC-eEEEEEECCCCCEEEEEEe
Confidence            998877754 4789999999999999985

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.79  E-value=9.7e-19  Score=131.28  Aligned_cols=128  Identities=17%  Similarity=0.228  Sum_probs=85.2

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      .++++||+|.|+|+++|++||+++||++.......+.......+....                ....            
T Consensus         5 ~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~----------------~~~~------------   56 (145)
T d1jc4a_           5 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPA----------------AKLT------------   56 (145)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESS----------------SSCC------------
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeece----------------eccc------------
Confidence            489999999999999999999999999987765443332222221100                0000            


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCc--------ccccCCceeeEEEEeCCHHHHHHHHHHH
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--------EYTKGNAYAQVAISTDDVYKSAEVVNLV  172 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~--------~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~  172 (220)
                                                   .....+++.......        +.....|+.||||.|+|+++++++|   
T Consensus        57 -----------------------------~~~~~~el~~~~~~~~~~~~~~~~~~~~~g~~Hia~~v~di~~~~~~l---  104 (145)
T d1jc4a_          57 -----------------------------EHMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATL---  104 (145)
T ss_dssp             -----------------------------TTCCEEEEEEESSTTSHHHHHHHHTTTCCEEEEEEEECSCHHHHHHHH---
T ss_pred             -----------------------------cccchhhhhhhhcccCcccccccccCCCCcceEEEEecchHHHHHHHH---
Confidence                                         011122332221111        1234568999999999999999999   


Q ss_pred             HHHcCCeeecCC-cccCCCCceEEEE--ECCCCCEEEEEec
Q 027676          173 TQELGGKITRQP-GSIPGLNTKITSF--VDPDGWKTVLVDN  210 (220)
Q Consensus       173 ~~~~G~~i~~~p-~~~~~~~~~~~~~--~DPdG~~iElv~~  210 (220)
                       +++|+++..++ ...++ +.+.+|+  +||+|++|||+|.
T Consensus       105 -~~~Gv~~~~~~~~~~~~-g~~~~f~~p~dp~G~~iEl~e~  143 (145)
T d1jc4a_         105 -RERGVQLLYDEPKLGTG-GNRINFMHPKSGKGVLIELTQY  143 (145)
T ss_dssp             -HHHTCCBSCSSCEECSS-SCEEEEBCGGGGTTSCEEEEEC
T ss_pred             -HHCCCEEeCCCceECCC-CCEEEEEeccCCCCeEEEEEEC
Confidence             79999987654 43233 2355666  7999999999996

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.79  E-value=3.8e-19  Score=133.94  Aligned_cols=123  Identities=19%  Similarity=0.354  Sum_probs=83.7

Q ss_pred             ceeeeEEEEE----CCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           22 RRFLHAVYRV----GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        22 ~~l~Hi~l~V----~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      .++.|+.|+|    +|+++|++||+++|||++..+...+. .+..++++.+  +....+.+....+              
T Consensus         4 ~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~~~~~~~--------------   66 (137)
T d1twua_           4 SSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLP--HADYHLEFTQYEG--------------   66 (137)
T ss_dssp             SSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESS--SSSEEEEEEEETT--------------
T ss_pred             CCCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCC--CCceeeecccccc--------------
Confidence            4566666665    79999999999999999987765433 3556666542  2233343332222              


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHH
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQ  174 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~  174 (220)
                                                                   ..+...+.+.+|++|.|+|   +++++++|    +
T Consensus        67 ---------------------------------------------~~~~~~~~~~~hlaf~v~~~~dv~~~~~~l----~   97 (137)
T d1twua_          67 ---------------------------------------------GSTAPVPHPDSLLVFYVPNAVELAAITSKL----K   97 (137)
T ss_dssp             ---------------------------------------------CCCCCCCCTTCEEEEECCCHHHHHHHHHHH----H
T ss_pred             ---------------------------------------------cccccccccCceEEEEeCCHHHHHHHHHHH----H
Confidence                                                         1122334467899999988   44555555    8


Q ss_pred             HcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          175 ELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       175 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++|+++..++.+  .+..+.+||+||||+.|||++...
T Consensus        98 ~~G~~~~~~~~~--~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          98 HMGYQEVESENP--YWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             HTTCCEECCSSH--HHHSSEEEEECTTCCEEEEESSCC
T ss_pred             HCCCeEeCCCCC--CCCceEEEEECCCCCEEEEEcCCC
Confidence            999999877654  223477999999999999998754

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.78  E-value=2.3e-18  Score=124.56  Aligned_cols=112  Identities=14%  Similarity=0.153  Sum_probs=76.7

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      ++++||.|.|+|+++|++||+++|||++..+..   +  ..+++..   ..+..+.+....                   
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~---~~~~~~~~~~~~-------------------   54 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRD---NDGFILTLMKGK-------------------   54 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEEC---TTCCEEEEEECS-------------------
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---C--cceeeee---cceeeeeeeeee-------------------
Confidence            689999999999999999999999999987642   1  1233321   123333332110                   


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                                                  ....++..|++|.|+|. +.++++.++++++|+++.
T Consensus        55 --------------------------------------------~~~~~~~~h~~f~v~~~-~~v~~~~~~l~~~G~~~~   89 (113)
T d1xqaa_          55 --------------------------------------------EVQYPKTFHVGFPQESE-EQVDKINQRLKEDGFLVE   89 (113)
T ss_dssp             --------------------------------------------SCCCCTTCCEEEECSSH-HHHHHHHHHHHHTTCCCC
T ss_pred             --------------------------------------------cccccccceeeeeeccc-cchhhhhhhHHHcCCccc
Confidence                                                        01123678999999984 344444455589999976


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      .+|..    ..+.+||+|||||.|||.+
T Consensus        90 ~~~~~----~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          90 PPKHA----HAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             CCEEC-----CEEEEEEETTTEEEEEEC
T ss_pred             cCCCC----ceEEEEEECCCCCEEEEEC
Confidence            55442    2478999999999999974

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.77  E-value=3.2e-18  Score=130.31  Aligned_cols=120  Identities=18%  Similarity=0.188  Sum_probs=81.8

Q ss_pred             ccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        18 ~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ...+++++|+.|.|+|+++|++||+++|||++..+..   +  ..++.+.+ ...++.+.+                   
T Consensus        11 ~~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~---~--~~~~~~~~-~~~~~~~~~-------------------   65 (146)
T d1f1ua1          11 APDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE---N--TIYLRSLE-EFIHHNLVL-------------------   65 (146)
T ss_dssp             CCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S--EEEEECTT-CCSSCSEEE-------------------
T ss_pred             CCCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC---C--ceeeeccc-ccccceeec-------------------
Confidence            3457899999999999999999999999999987632   1  12222211 111110100                   


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcC
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELG  177 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G  177 (220)
                                                              .       .....++.|++|.+.+. +.++.+.++++++|
T Consensus        66 ----------------------------------------~-------~~~~~~~~h~~~~~~~~-~dl~~~~~~l~~~G   97 (146)
T d1f1ua1          66 ----------------------------------------R-------QGPIAAVAAFAYRVKSP-AEVDAAEAYYKELG   97 (146)
T ss_dssp             ----------------------------------------E-------ECSSCEEEEEEEEESSH-HHHHHHHHHHHHTT
T ss_pred             ----------------------------------------c-------ccCCCCCceeeEeeccc-hhHHHHHHHHHHcC
Confidence                                                    0       01223788999999863 33344444458999


Q ss_pred             CeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          178 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       178 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +++...+.....+..+.+||+|||||.|||+..
T Consensus        98 ~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          98 CRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             CCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             CceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            999887766555445789999999999999875

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.77  E-value=8.1e-18  Score=124.18  Aligned_cols=126  Identities=48%  Similarity=0.814  Sum_probs=85.5

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      +|+.|++|.|+|+++|++||+++|||++..+...+...+...+...........                          
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------   55 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTV--------------------------   55 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCE--------------------------
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccc--------------------------
Confidence            589999999999999999999999999988765444333322322110000000                          


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeee
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  181 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~  181 (220)
                                                       ................+..|+++.++++.++++++    ...++++.
T Consensus        56 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   98 (139)
T d2c21a1          56 ---------------------------------LELTYNYGVTSYKHDEAYGHIAIGVEDVKELVADM----RKHDVPID   98 (139)
T ss_dssp             ---------------------------------EEEEEETTCCCCCCCSSEEEEEEEESCHHHHHHHH----HHTTCCEE
T ss_pred             ---------------------------------cccccccCcccccCCCccceeeeehhhHHHHHHHH----HHcCCcee
Confidence                                             00000011111233457789999999999999999    67888876


Q ss_pred             cCCcccCCCCceEEEEECCCCCEEEEEechhhhh
Q 027676          182 RQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  215 (220)
Q Consensus       182 ~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~~~  215 (220)
                      .++.     +.+++||+|||||.|||++..+...
T Consensus        99 ~~~~-----g~~~~~~~DPdGn~iEl~~~~~~~~  127 (139)
T d2c21a1          99 YEDE-----SGFMAFVVDPDGYYIELLNEKTMME  127 (139)
T ss_dssp             EECS-----SSSEEEEECTTSCEEEEEEHHHHHH
T ss_pred             eCCC-----CcEEEEEECCCCCEEEEEECCCCCC
Confidence            5543     2478999999999999999877644

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=7.9e-18  Score=131.75  Aligned_cols=123  Identities=15%  Similarity=0.081  Sum_probs=81.0

Q ss_pred             cCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEE
Q 027676           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (220)
Q Consensus        19 ~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~   98 (220)
                      -.+.+++||+|.|+|+++|++||+++|||+++.+..    .+..+++..+. ... .+.+..                  
T Consensus         8 ~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~-~~~-~~~~~~------------------   63 (170)
T d1zswa2           8 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGE-AFG-EIVVKY------------------   63 (170)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTC-STT-CEEEEE------------------
T ss_pred             HHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCc-cce-EEEecc------------------
Confidence            356899999999999999999999999999988632    12222222111 000 010000                  


Q ss_pred             EeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCC
Q 027676           99 ATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  178 (220)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~  178 (220)
                                                               ...........+++||||.|+| .+.++++.+++++.|+
T Consensus        64 -----------------------------------------~~~~~~~~~~~~l~HiAf~V~~-~~~l~~~~~~l~~~G~  101 (170)
T d1zswa2          64 -----------------------------------------LDGPTEKPGRGSIHHLAIRVKN-DAELAYWEEQVKQRGF  101 (170)
T ss_dssp             -----------------------------------------CCSSBCBCCBTCEEEEEEEESS-HHHHHHHHHHHHHTTC
T ss_pred             -----------------------------------------ccccccccCccccceEEEEeCC-hHHHHHHHHHHHhcCC
Confidence                                                     0000001123378999999998 3555666677799999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ++. ++..  .+..+.+||+|||||.|||+..
T Consensus       102 ~~~-~~~~--~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2         102 HSS-GIID--RFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             CCC-CCEE--CSSEEEEEEECTTCCEEEEEEE
T ss_pred             Ccc-cccc--CCCEEEEEEECCCCcEEEEEEC
Confidence            974 3333  2335789999999999999985

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.76  E-value=4.6e-18  Score=127.34  Aligned_cols=115  Identities=15%  Similarity=0.150  Sum_probs=80.0

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      +.+++|++|.|+|+++|++||+++|||++..+..      ...++..+.  .++.+.|..                    
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~--~~~~l~l~~--------------------   53 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDS--RAWRIAVQQ--------------------   53 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSS--BSCSEEEEE--------------------
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecC--CceEEEEec--------------------
Confidence            5689999999999999999999999999987632      234454321  222222210                    


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  180 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i  180 (220)
                                                                    ....++.|++|.|.+. +.++.+.++++++|+++
T Consensus        54 ----------------------------------------------~~~~~~~h~~f~v~~~-~dl~~~~~~l~~~g~~~   86 (131)
T d1lgta1          54 ----------------------------------------------GEVDDLAFAGYEVADA-AGLAQMADKLKQAGIAV   86 (131)
T ss_dssp             ----------------------------------------------CTTCEEEEEEEEESSH-HHHHHHHHHHHHTTCCC
T ss_pred             ----------------------------------------------CCCCCceEEEEEEccH-HHHHHHHHHHHHcCCce
Confidence                                                          1123678999999774 33344444558999999


Q ss_pred             ecCCcccC--CCCceEEEEECCCCCEEEEEec
Q 027676          181 TRQPGSIP--GLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       181 ~~~p~~~~--~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ...|....  .+..+.+||+|||||.|||+..
T Consensus        87 ~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          87 TTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             EECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             EECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence            98875421  1234789999999999999863

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.2e-18  Score=132.94  Aligned_cols=136  Identities=17%  Similarity=0.210  Sum_probs=91.5

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      ..+++||+|.|+|+++|++||+++|||+++.+...+.+....+++...  .....++|..........            
T Consensus         9 ~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~------------   74 (149)
T d1sqia1           9 FLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIK--QGKIVFVLCSALNPWNKE------------   74 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEE--ETTEEEEEEEESSTTCHH------------
T ss_pred             eeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEec--CCcEEEEEEeccCCCCch------------
Confidence            478999999999999999999999999998776443332222222111  111222222111000000            


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  180 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i  180 (220)
                                                              ........+.|+.||||.|+|+++++++|    +++|+++
T Consensus        75 ----------------------------------------~~~~~~~~g~G~~hiaf~V~di~~~~~~l----~~~G~~~  110 (149)
T d1sqia1          75 ----------------------------------------MGDHLVKHGDGVKDIAFEVEDCEHIVQKA----RERGAKI  110 (149)
T ss_dssp             ----------------------------------------HHHHHHHHCSEEEEEEEEEECHHHHHHHH----HHHTCCE
T ss_pred             ----------------------------------------hhhhhhhCCCeEEEEEEEeccHHHHHHHH----HHCCCEE
Confidence                                                    00001224679999999999999999999    7999999


Q ss_pred             ecCCcccCC--CCceEEEEECCCCCEEEEEechhhh
Q 027676          181 TRQPGSIPG--LNTKITSFVDPDGWKTVLVDNEDFL  214 (220)
Q Consensus       181 ~~~p~~~~~--~~~~~~~~~DPdG~~iElv~~~~~~  214 (220)
                      ..+|.....  +..++++++.|+|.++|||++.++.
T Consensus       111 ~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~  146 (149)
T d1sqia1         111 VREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYT  146 (149)
T ss_dssp             EEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             ccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCc
Confidence            999876433  2236788899999999999998764

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.75  E-value=1.2e-17  Score=126.17  Aligned_cols=120  Identities=18%  Similarity=0.250  Sum_probs=77.0

Q ss_pred             ccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        18 ~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ++.+++++||.|.|+|+++|++||+++|||++..+..  ..  . .+........+..+.+.                  
T Consensus         2 ~~~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~--~~--~-~~~~~~~~~~~~~~~~~------------------   58 (145)
T d1mpya1           2 NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QG--R-VYLKAWTEVDKFSLVLR------------------   58 (145)
T ss_dssp             TTSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TS--C-EEEECTTCCBSCSEEEE------------------
T ss_pred             CcCCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeec--cC--c-cceecccccceeecccc------------------
Confidence            4568999999999999999999999999999987632  11  1 11111111111111110                  


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCC---HHHHHHHHHHHHH
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNLVTQ  174 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~D---v~a~~~~l~~~~~  174 (220)
                                                                      .....+..|++|.+.+   +++++++|    +
T Consensus        59 ------------------------------------------------~~~~~~~~~~~~~~~~~~dl~~~~~~L----~   86 (145)
T d1mpya1          59 ------------------------------------------------EADEPGMDFMGFKVVDEDALRQLERDL----M   86 (145)
T ss_dssp             ------------------------------------------------ECSSCEEEEEEEEESCHHHHHHHHHHH----H
T ss_pred             ------------------------------------------------ccCcccceeeeeeehhHHHHHHHHHHH----H
Confidence                                                            0011234555566554   55555555    8


Q ss_pred             HcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          175 ELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       175 ~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      ++|+++...|.....+..+.+||+|||||.|||+...+
T Consensus        87 ~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          87 AYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             HHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             HCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            99999887665432333488999999999999997543

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.75  E-value=1.4e-17  Score=123.39  Aligned_cols=118  Identities=20%  Similarity=0.261  Sum_probs=77.8

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCc-eeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK-YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      .+++|++|.|+|+++|++||+++|||++..+....... ....++..+    +..+.+.                     
T Consensus         3 ~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------------   57 (130)
T d1r9ca_           3 EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIM---------------------   57 (130)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEE---------------------
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeec---------------------
Confidence            57999999999999999999999999998875433211 112222110    0111110                     


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeC--CHHHHHHHHHHHHHHcCC
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELGG  178 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~--Dv~a~~~~l~~~~~~~G~  178 (220)
                                                            ..    +.....+..|+||.|+  |++++++++    +++|+
T Consensus        58 --------------------------------------~~----~~~~~~~~~~~~f~v~~~dv~~~~~~l----~~~gv   91 (130)
T d1r9ca_          58 --------------------------------------QG----EKLAERSYNHIAFKIDDADFDRYAERV----GKLGL   91 (130)
T ss_dssp             --------------------------------------EC----CCCSSCCSCEEEEECCGGGHHHHHHHH----HHHTC
T ss_pred             --------------------------------------cc----ccccccceeeeeecccHHHHHHHHHHH----HHCCC
Confidence                                                  00    0112336778999775  688888888    78999


Q ss_pred             eeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          179 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       179 ~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ++..++.... +..+.+||+|||||.|||.+..
T Consensus        92 ~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          92 DMRPPRPRVE-GEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             CBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             eEecCCcccC-CCEEEEEEECCCCCEEEEEECC
Confidence            9877654332 2347899999999999998754

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.75  E-value=6.3e-18  Score=126.84  Aligned_cols=116  Identities=16%  Similarity=0.130  Sum_probs=80.9

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      ++.+|+|++|.|+|+++|++||+++|||++..+..      ...|+..+  ..++.+.+.                    
T Consensus         1 ~i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~--~~~~~l~~~--------------------   52 (132)
T d1kw3b1           1 SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRAD--QRAWRIAVQ--------------------   52 (132)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESS--SBSCSEEEE--------------------
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeee--ecceeeeee--------------------
Confidence            36799999999999999999999999999987642      23444432  122212111                    


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCe
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~  179 (220)
                                                                    .....++.|++|.|.+. +.++++.++++++|++
T Consensus        53 ----------------------------------------------~~~~~~~~h~~f~v~~~-~dl~~~~~~l~~~g~~   85 (132)
T d1kw3b1          53 ----------------------------------------------PGELDDLAYAGLEVDDA-AALERMADKLRQAGVA   85 (132)
T ss_dssp             ----------------------------------------------ECTTCEEEEEEEECSSH-HHHHHHHHHHHHHTCC
T ss_pred             ----------------------------------------------ccCCCCceEEEEEeccH-HHHHHHHHHHHHcCCC
Confidence                                                          01223688999999874 3344455556899999


Q ss_pred             eecCCcccCC--CCceEEEEECCCCCEEEEEec
Q 027676          180 ITRQPGSIPG--LNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       180 i~~~p~~~~~--~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +...+.....  +..+.+||+|||||.|||+..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          86 FTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             CEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             ceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            9987754211  123679999999999999854

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.74  E-value=2e-18  Score=133.80  Aligned_cols=137  Identities=15%  Similarity=0.171  Sum_probs=92.0

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCc--eeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK--YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~   97 (220)
                      ++.+++||+|+|+|+++|++||+++|||+++.....+...  ...+.+..    ....++|............       
T Consensus         4 ~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~----~~~~i~l~~~~~~~~~~~~-------   72 (163)
T d1t47a1           4 PVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTN----GSARFVLTSVIKPATPWGH-------   72 (163)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEE----TTEEEEEEEESSCCSHHHH-------
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEec----CCEEEEEeccCCCCCcccc-------
Confidence            4689999999999999999999999999998765433322  12222222    1223333221110000000       


Q ss_pred             EEeCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcC
Q 027676           98 IATEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELG  177 (220)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G  177 (220)
                                                                .........+.|+.||||.|+|+++++++|    +++|
T Consensus        73 ------------------------------------------~~~~~~~~~g~G~~hiaf~VdDid~a~~~l----~~~G  106 (163)
T d1t47a1          73 ------------------------------------------FLADHVAEHGDGVVDLAIEVPDARAAHAYA----IEHG  106 (163)
T ss_dssp             ------------------------------------------HHHHHHHHHCSEEEEEEEECSCHHHHHHHH----HHTT
T ss_pred             ------------------------------------------ccchhhhcCCCceEEEEEeeCCHHHHHHHH----HHCC
Confidence                                                      000001224569999999999999999999    7999


Q ss_pred             CeeecCCcccCCC--CceEEEEECCCCCEEEEEechhh
Q 027676          178 GKITRQPGSIPGL--NTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       178 ~~i~~~p~~~~~~--~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      +++..+|....+.  ...++++++|+|..++|+++.++
T Consensus       107 a~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~  144 (163)
T d1t47a1         107 ARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGY  144 (163)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEE
T ss_pred             CeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCC
Confidence            9999998764332  23789999999999999997553

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.74  E-value=3.2e-17  Score=128.96  Aligned_cols=122  Identities=19%  Similarity=0.149  Sum_probs=83.1

Q ss_pred             cceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEe
Q 027676           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (220)
Q Consensus        21 ~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~  100 (220)
                      ++||+||+|.|+|+++|++|| ++|||++..+...+.+....+|+..+  ..++.+.+                      
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~--~~~~~l~~----------------------   57 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRK--QTVHDTAL----------------------   57 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESS--SSSCSEEE----------------------
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccC--ccccceec----------------------
Confidence            579999999999999999999 68999998776655554445555431  11111111                      


Q ss_pred             CccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCee
Q 027676          101 EDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  180 (220)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i  180 (220)
                                                           .       .....+++|++|.+.++++..+ ..++++++|+++
T Consensus        58 -------------------------------------~-------~~~~~~~~H~~f~~~~~~~v~~-~~~~l~~~g~~~   92 (176)
T d1f1ua2          58 -------------------------------------T-------GGNGPRMHHVAFATHEKHNIIQ-ICDKMGALRISD   92 (176)
T ss_dssp             -------------------------------------E-------ESSBSEEEEEEEECSSHHHHHH-HHHHHHHTTCGG
T ss_pred             -------------------------------------c-------cccCCCccceeEEeccchhHHH-HHHHHHHcCCce
Confidence                                                 0       0123478999999998654443 334557889854


Q ss_pred             --ecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          181 --TRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       181 --~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                        ...|+....+...++||+|||||.|||.....
T Consensus        93 ~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          93 RIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             GEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             eeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence              34555543334478999999999999988543

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=3.2e-17  Score=127.24  Aligned_cols=149  Identities=15%  Similarity=0.079  Sum_probs=95.1

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      .+.+++||+|+|+|+++|++||+++|||++..+...+.+......+..+..+.  .+.+........ ..+..       
T Consensus         9 ~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~-~~~~~-------   78 (167)
T d1sqda1           9 KVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDL--RFLFTAPYSPSL-SAGEI-------   78 (167)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTE--EEEEEEECCGGG-TTTCC-------
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCe--eEEEeccccccc-ccccc-------
Confidence            45799999999999999999999999999988765444332222222211112  222211111000 00000       


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCc------ccccCCceeeEEEEeCCHHHHHHHHHHHH
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT------EYTKGNAYAQVAISTDDVYKSAEVVNLVT  173 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~------~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~  173 (220)
                           +..                           .+........      ....+.|+.||||.|+|+++++++|    
T Consensus        79 -----~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l----  122 (167)
T d1sqda1          79 -----KPT---------------------------TTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----  122 (167)
T ss_dssp             -----GGG---------------------------CCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----
T ss_pred             -----ccc---------------------------cccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHH----
Confidence                 000                           0000000000      0123569999999999999999999    


Q ss_pred             HHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhhhh
Q 027676          174 QELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  215 (220)
Q Consensus       174 ~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~~~  215 (220)
                      +++|+++..+|...+++ .++++++.+++..++||++.+...
T Consensus       123 ~~~G~~~~~~P~~~~~~-~~~a~I~~~gd~~~~~v~r~~~~~  163 (167)
T d1sqda1         123 VANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKAEDT  163 (167)
T ss_dssp             HHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECCC--
T ss_pred             HHCCCEEecCCeecCCC-EEEEEEEccCCcEEEEEecCCCcc
Confidence            79999999999887664 578999999999999999977543

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.72  E-value=6.6e-17  Score=121.49  Aligned_cols=113  Identities=21%  Similarity=0.328  Sum_probs=76.9

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .+++|++|.|+|++++++||+++|||++..+..      ...++..+  +....+.+...  .                 
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~--~~~~~l~~~~~--~-----------------   55 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCG--DLWVCLSYDEA--R-----------------   55 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEET--TEEEEEEECTT--C-----------------
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccc--cccceeecccc--c-----------------
Confidence            679999999999999999999999999987642      12333322  12222222100  0                 


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEe--CCHHHHHHHHHHHHHHcCCe
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--DDVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v--~Dv~a~~~~l~~~~~~~G~~  179 (220)
                                                               ..+.....+..|++|.+  +|+++++++|    +++|++
T Consensus        56 -----------------------------------------~~~~~~~~~~~h~~~~~~~~d~~~~~~~l----~~~Gv~   90 (140)
T d1npba_          56 -----------------------------------------QYVPPQESDYTHYAFTVAEEDFEPLSQRL----EQAGVT   90 (140)
T ss_dssp             -----------------------------------------CCCCGGGSCSCEEEEECCHHHHHHHHHHH----HHTTCC
T ss_pred             -----------------------------------------ccCCCcCCccceeeeechHHHHHHHHHHH----HHCCCe
Confidence                                                     00012234678889988  4566666666    899999


Q ss_pred             eecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          180 ITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       180 i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +...+.    ...+.+||+|||||.|||.+.
T Consensus        91 ~~~~~~----~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          91 IWKQNK----SEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             EEECCC----SSSEEEEEECTTCCEEEEEEC
T ss_pred             EeecCC----CCceEEEEECCCCCEEEEEEC
Confidence            876654    234789999999999999775

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.70  E-value=1e-16  Score=115.00  Aligned_cols=53  Identities=15%  Similarity=0.086  Sum_probs=46.9

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEE
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  208 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  208 (220)
                      +..|++|.++|++++++++    +++|+++..+|...+.+ .+.+|++|||||.|||+
T Consensus        59 ~~~~~~~~~~dvd~~~~~l----~~~g~~~~~~p~~~~~g-~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          59 DVPDLSIEVDNFDEVHARI----LKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CCCSEEEEESCHHHHHHHH----HHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             ceeEEEEEecCHHHHHHHH----HhhccccccCCeEcCCC-cEEEEEECCCCCEEEeC
Confidence            4568999999999999999    79999999998877654 47899999999999996

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.69  E-value=5.2e-17  Score=120.25  Aligned_cols=56  Identities=18%  Similarity=0.070  Sum_probs=45.9

Q ss_pred             CceeeEEEEeCCH---HHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          150 NAYAQVAISTDDV---YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv---~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .+..|++|.|+|+   +++++++    +++|+++..+|...+++ .+.+||+|||||.|||+++
T Consensus        68 ~~~~~l~~~v~~~~~l~~~~~~l----~~~G~~~~~~p~~~~~G-~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          68 GHRFAIAFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             SCSCEEEEECSSHHHHHHHHHHH----HHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEE
T ss_pred             ccceeEeeeeccchhhHHHHHHH----HhccCccccCCeEcCCC-cEEEEEECCCCCEEEEEec
Confidence            3567999999984   4455555    89999999999876654 4789999999999999986

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.68  E-value=8.1e-17  Score=125.96  Aligned_cols=141  Identities=13%  Similarity=0.043  Sum_probs=93.5

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      .+.+++||+|+|+|+++|++||+++|||+++.+...+.+.........+.  ....+.+..........           
T Consensus        10 ~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----------   76 (172)
T d1sp8a1          10 HTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRS--GSLSFLFTAPYAHGADA-----------   76 (172)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEE--TTEEEEEEEECCSSCCG-----------
T ss_pred             CcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEecc--CCeeeEEeeccCCCchh-----------
Confidence            34799999999999999999999999999988765444332222221111  11222221111000000           


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCC------cccccCCceeeEEEEeCCHHHHHHHHHHHH
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV------TEYTKGNAYAQVAISTDDVYKSAEVVNLVT  173 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~------~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~  173 (220)
                                                         +++......      .....+.|+.||||.|+|++++++++    
T Consensus        77 -----------------------------------~~~~~~~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l----  117 (172)
T d1sp8a1          77 -----------------------------------ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRAS----  117 (172)
T ss_dssp             -----------------------------------GGCSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHH----
T ss_pred             -----------------------------------hhcccccCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHH----
Confidence                                               000000000      01224679999999999999999999    


Q ss_pred             HHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechhh
Q 027676          174 QELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  213 (220)
Q Consensus       174 ~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~~  213 (220)
                      +++|+++..+|....++ .++++++.|.+.+++||++.+.
T Consensus       118 ~~~Ga~~~~~P~~~~~g-~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1         118 VAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             HTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCTT
T ss_pred             HHCcCEeccCCccCCCC-EEEEEEECCCCcEEEEEecCCC
Confidence            79999999999876553 5889999998889999998753

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=5.5e-16  Score=115.49  Aligned_cols=110  Identities=23%  Similarity=0.306  Sum_probs=73.9

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEEeC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~~~  101 (220)
                      .+++||+|.|+|++++++||+++||+++..+...      ..++..+.    ..+......                   
T Consensus         3 ~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~~----~~~~~~~~~-------------------   53 (134)
T d1nkia_           3 TGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELGS----LWLCLSREP-------------------   53 (134)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEETT----EEEEEEECT-------------------
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecCC----eEEEEeeec-------------------
Confidence            5799999999999999999999999999876431      22333221    111111000                   


Q ss_pred             ccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEe--CCHHHHHHHHHHHHHHcCCe
Q 027676          102 DALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--DDVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v--~Dv~a~~~~l~~~~~~~G~~  179 (220)
                                                                .+.....+..|++|.+  +|+++++++|    +++|++
T Consensus        54 ------------------------------------------~~~~~~~~~~h~~~~~~~~dl~~~~~~l----~~~G~~   87 (134)
T d1nkia_          54 ------------------------------------------QYGGPAADYTHYAFGIAAADFARFAAQL----RAHGVR   87 (134)
T ss_dssp             ------------------------------------------TCCCCCSSSCEEEEEECHHHHHHHHHHH----HHTTCC
T ss_pred             ------------------------------------------cccccccccccchhccccchHHHHHHHH----HHCCCc
Confidence                                                      0011223556777666  5666666666    899999


Q ss_pred             eecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          180 ITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       180 i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +..++.    +..+.+||+|||||.|||...
T Consensus        88 ~~~~~~----~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          88 EWKQNR----SEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             EEECCC----SSSCEEEEECTTCCEEEEESC
T ss_pred             CccCCC----cceeEEEEECCCCCEEEEEEC
Confidence            865543    234789999999999999874

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.65  E-value=1e-15  Score=117.92  Aligned_cols=59  Identities=7%  Similarity=-0.091  Sum_probs=42.9

Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCC-EEEEEec
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW-KTVLVDN  210 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~-~iElv~~  210 (220)
                      .+++|+||.|+|.++ +.++.++++++|+.+. .|.....+...++|++||||+ .+|+...
T Consensus        73 ~gl~Hiaf~v~~~dd-v~~~~d~l~~~G~~~~-g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          73 KRIHHFMLQANTIDD-VGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             SSEEEEEEEBSSHHH-HHHHHHHHHHTTCBCB-CSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             CceeEEEEECCCHHH-HHHHHHHHHhcCCcee-cCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence            489999999998655 3344556689998764 454443333478999999998 5999764

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.56  E-value=6.7e-14  Score=101.96  Aligned_cols=55  Identities=24%  Similarity=0.311  Sum_probs=43.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC-------CcccCCCCceEEEEECCCCCEEEEEech
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQ-------PGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~-------p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      ..|+++.|+|+++.++.+    +++|+++...       |...+. +.+.+||+|||||+|||+|..
T Consensus        58 ~~~~~~~~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          58 WFSCCLRLDDLAEFYRQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             CCEEEEEESCHHHHHHHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECC
T ss_pred             CcEEEEEECCHHHHHHHH----hhhhhhhccccccccccceecCC-CcEEEEEECCCCCEEEEEEcc
Confidence            457999999999999999    6788777554       333333 347899999999999999863

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.54  E-value=8.3e-14  Score=101.27  Aligned_cols=55  Identities=13%  Similarity=-0.005  Sum_probs=40.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCccc---C---CCCceEEEEECCCCCEEEEEec
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI---P---GLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~---~---~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      ..|++|.++|++++.+++    ++++......+...   +   ....+.+||+|||||+|||..-
T Consensus        61 ~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          61 NTSAWIEVTDPDALHEEW----ARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             TCEEEEEESCHHHHHHHH----HTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             eeEEEEeechhHHHHHHH----HhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            457899999999999999    67776655443210   0   1124789999999999999863

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.51  E-value=2.1e-13  Score=98.42  Aligned_cols=58  Identities=14%  Similarity=0.048  Sum_probs=40.2

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHH----HHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          151 AYAQVAISTDDVYKSAEVVNLV----TQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~----~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      +..++.+.+++++.....+.++    +...|+.+..++...++  ++.+||+|||||.|||+..
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~e  120 (120)
T d1xrka_          59 DNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVAE  120 (120)
T ss_dssp             GGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             CCceEEEeeccHHHHHHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEEC
Confidence            4456888999998888877422    12334444455555444  3789999999999999863

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.49  E-value=1.6e-13  Score=102.14  Aligned_cols=54  Identities=13%  Similarity=0.088  Sum_probs=47.2

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      +..+|++.|+|+++++.++    +++|+++..+|...+.+ .+.++|+||+|+.|+|.|
T Consensus        82 ~~~~l~~~v~d~~~~~~~~----~~~g~~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          82 SGVTFLLGTKDAEAAVAKA----VDAGAVKVEVTEAEVEL-GFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             CCCEEEEECSCHHHHHHHH----HHTTCEECCCCHHHHHT-TEEEEEECTTSCEEEEEC
T ss_pred             cceEEEEeecCcceeEEEe----ecccceEecCccccccc-CEEEEEECCCCCEEEEeC
Confidence            4468999999999999998    79999999999876654 478999999999999975

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.36  E-value=3.4e-12  Score=97.50  Aligned_cols=123  Identities=14%  Similarity=0.102  Sum_probs=83.8

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecCCcccCCCCceeEEEEE
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~~~~~~~~~   99 (220)
                      .+.+++||.++|+|++++.+||+. |||+.+.+....    ....++-|    ...+.+  +....+             
T Consensus         6 g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G----~i~ll~--~~~~~s-------------   61 (150)
T d1cjxa1           6 GLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQG----EINLIL--NNEPNS-------------   61 (150)
T ss_dssp             CEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEET----TEEEEE--ECCSSS-------------
T ss_pred             ccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecC----cEEEEe--cCCCCC-------------
Confidence            467999999999999999999976 999998764321    12222211    111111  100000             


Q ss_pred             eCccccceEEEeecCCCCceEEEEeeccCCCCceEEEEEEecCCcccccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCe
Q 027676          100 TEDALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK  179 (220)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~  179 (220)
                                     +..                         .-....+.|+.||||+|+|++++++++    +++|++
T Consensus        62 ---------------~~~-------------------------~~~~~hg~gv~hiaf~V~D~~~a~~~a----~~~Ga~   97 (150)
T d1cjxa1          62 ---------------IAS-------------------------YFAAEHGPSVCGMAFRVKDSQKAYNRA----LELGAQ   97 (150)
T ss_dssp             ---------------HHH-------------------------HHHHHHSSEEEEEEEEESCHHHHHHHH----HHTTCC
T ss_pred             ---------------HhH-------------------------hHHhhCCCceEEEEEEeCCHHHHHHHH----HHCCCE
Confidence                           000                         001235679999999999999999999    799999


Q ss_pred             eecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          180 ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       180 i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +..+|.. ++ ...+..+++|+|.+|.|+++.+
T Consensus        98 ~i~~~~~-~g-~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          98 PIHIDTG-PM-ELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             BCCCCCC-TT-CBCCCEEECGGGCEEEEECCCS
T ss_pred             EcccCCC-CC-ceeeeEEEcCCCCEEEEECcCC
Confidence            8877643 22 2367889999999999999754

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.26  E-value=5.3e-12  Score=101.08  Aligned_cols=35  Identities=20%  Similarity=0.207  Sum_probs=31.3

Q ss_pred             cceeeeEEEEEC--CHHHHHHHHHHhcCCEEEEeecC
Q 027676           21 KRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDV   55 (220)
Q Consensus        21 ~~~l~Hi~l~V~--Dle~s~~FY~~vLG~~~~~~~~~   55 (220)
                      ..+++||++.|+  |+++++.||+++|||+.....+.
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di   39 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDI   39 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEE
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEec
Confidence            578999999998  99999999999999998876543

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.21  E-value=4.8e-11  Score=96.78  Aligned_cols=37  Identities=19%  Similarity=0.256  Sum_probs=32.8

Q ss_pred             cccCcceeeeEEEEECCHHHHHHHHHHhcCCEEEEee
Q 027676           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKR   53 (220)
Q Consensus        17 ~~~~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~   53 (220)
                      +...+.+++||++.|+|++++++||+++|||+...+.
T Consensus         3 ~d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~   39 (224)
T d1sp8a2           3 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEF   39 (224)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEe
Confidence            3456789999999999999999999999999987754

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=4.3e-10  Score=90.16  Aligned_cols=38  Identities=13%  Similarity=0.206  Sum_probs=32.7

Q ss_pred             eccccCcceeeeEEEEECC--HHHHHHHHHHhcCCEEEEe
Q 027676           15 EWPKKDKRRFLHAVYRVGD--LDRTIKFYTECFGMKLLRK   52 (220)
Q Consensus        15 ~~~~~~~~~l~Hi~l~V~D--le~s~~FY~~vLG~~~~~~   52 (220)
                      ..|.....+++|+++.|++  +++++.||+++|||+....
T Consensus        16 ~~p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~   55 (210)
T d1sqia2          16 KLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWS   55 (210)
T ss_dssp             GSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECC
T ss_pred             cCCCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEE
Confidence            3455567899999999998  9999999999999987654

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.05  E-value=6.9e-09  Score=76.84  Aligned_cols=58  Identities=14%  Similarity=0.098  Sum_probs=43.7

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      +-.++++.+++.+.. +.+.++ .++|+++..+|...|.+ .+.++|+||+|+.|+|-...
T Consensus        79 ~~~~~~l~~~~~d~~-~~~~~~-l~~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          79 KGCSISLNVDSKAEA-ERLFNA-LAEGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CSEEEEEECSSHHHH-HHHHHH-HHTTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEESC
T ss_pred             CcEEEEEEcCCHHHH-HHHHhh-cccCceeecCccccCCC-cEEEEEECCCCCEEEEEecC
Confidence            456799999985543 333222 57899999999887764 47899999999999997653

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.04  E-value=3.8e-10  Score=89.72  Aligned_cols=35  Identities=17%  Similarity=0.375  Sum_probs=31.2

Q ss_pred             ccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCc
Q 027676          147 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  185 (220)
Q Consensus       147 ~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~  185 (220)
                      ..+.|++||||.|+|+.++++.|    +++|+++...|.
T Consensus        85 ~~g~GiQHIAl~tdDI~~av~~L----~~~G~~fL~~p~  119 (199)
T d1t47a2          85 YGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTPD  119 (199)
T ss_dssp             HTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCG
T ss_pred             cCCCcceEEEEEcCCHHHHHHHH----HHcCCCCCCCCh
Confidence            34569999999999999999999    799999998773

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.87  E-value=1e-08  Score=82.99  Aligned_cols=34  Identities=24%  Similarity=0.316  Sum_probs=31.0

Q ss_pred             CcceeeeEEEEECCHHHHHHHHHHhcCCEEEEee
Q 027676           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKR   53 (220)
Q Consensus        20 ~~~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~   53 (220)
                      .+.+++||++.|+|++++++||+.+||+....+.
T Consensus        19 gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~   52 (230)
T d1sqda2          19 GIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEF   52 (230)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCccCcceecccCHHHHHHHHHHHcCCeeeEEe
Confidence            4689999999999999999999999999987764

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.64  E-value=1.5e-06  Score=63.92  Aligned_cols=54  Identities=15%  Similarity=0.015  Sum_probs=39.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEE
Q 027676          152 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  208 (220)
Q Consensus       152 ~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  208 (220)
                      ...+++.+++.+. .+++.++ .++|+++..++...+.+ .+...++||.|+.|.|-
T Consensus        78 ~~s~~l~~~~~d~-~~~~~~~-l~~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          78 AFSFFVDCESNAQ-IERLAEA-LSDGGKALMPLGDYGFS-QRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             TEEEEEECCCHHH-HHHHHHH-HHTTSEEEEEEECCSSS-SEEEEEECTTSCEEEEE
T ss_pred             ceEEEEEeccHHH-HHHHHHH-HhcCCEEecCccccccc-ceEEEEECCCCCEEEEE
Confidence            3568889988544 3334333 47799999998876554 47899999999999985

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.20  E-value=3.5e-05  Score=56.01  Aligned_cols=54  Identities=15%  Similarity=0.065  Sum_probs=39.6

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEec
Q 027676          154 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  210 (220)
Q Consensus       154 Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~  210 (220)
                      .+++.+++.++ .+++.+++ +.|+++..++...+.+ .+...++||.|+.|.|..+
T Consensus        75 s~~v~~~~~~e-~~~~~~~L-~~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          75 SLFVTVKDTIE-MERLFNGL-KDEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CEEEECSSHHH-HHHHHHHH-HTTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             EEEeccCCHHH-HHHHHHHh-ccCCEEeccccccccc-ceEEEEECCCCCEEEEeCC
Confidence            47888888654 33343333 5777999888876654 4778999999999999764

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.90  E-value=0.026  Score=41.68  Aligned_cols=47  Identities=13%  Similarity=-0.006  Sum_probs=32.6

Q ss_pred             eeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEech
Q 027676          153 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  211 (220)
Q Consensus       153 ~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~  211 (220)
                      .+|++.++|. +.++++.++|.+.| ++..+     .     ..++|+.|..|.|+.+.
T Consensus        74 ~sl~l~~d~~-eE~d~~f~~LsegG-~~~~~-----~-----G~v~DkFGV~Wqi~~~~  120 (156)
T d1u69a_          74 FSFQVATDDQ-AETDRLWNAIVDNG-GEESA-----C-----GWCRDKWGISWQITPRV  120 (156)
T ss_dssp             EEEEEEESSH-HHHHHHHHHHHHTT-CEECS-----T-----TEEECTTSCEEEEEEHH
T ss_pred             eEEEEecCCH-HHHHHHHHHHhccC-CCCCC-----C-----eEEECCCCCEEEeChHH
Confidence            4699999995 44566666655544 43322     2     35899999999999873

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=95.19  E-value=0.03  Score=37.60  Aligned_cols=53  Identities=17%  Similarity=0.339  Sum_probs=41.2

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEechh
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++||.+.|+|++++.+...   +-.|.++...+.   +   ..+++.++++..+.+.+...
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~---~~lG~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~   55 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLE---KYFGLTCSGTRG---N---AFAVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHH---HHHCCEEEEEET---T---TEEEEECTTCCEEEEEECSS
T ss_pred             cccEEEEEeCCHHHHHHHHH---HhhCCEEEEeec---C---cceeeeecceeeeeeeeeec
Confidence            67899999999999998885   458998764432   1   45778888999998887644

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.03  Score=40.03  Aligned_cols=56  Identities=13%  Similarity=0.137  Sum_probs=35.7

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEECCCCCEEEEEe
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  209 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv~  209 (220)
                      +++||+|.|.|++++.+...   +..|++.........+......+...-++..+++.+
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~---~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   66 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYC---NKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCS   66 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHh---hccceEEEEEecccCCceEEEEEEecCCcEEEEEEe
Confidence            78999999999999999886   578998765433211211122233333445666655

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=94.19  E-value=0.037  Score=40.25  Aligned_cols=58  Identities=10%  Similarity=0.109  Sum_probs=39.1

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCc-ccCCCCceEEEEECCCCCEEEEEechh
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG-SIPGLNTKITSFVDPDGWKTVLVDNED  212 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~-~~~~~~~~~~~~~DPdG~~iElv~~~~  212 (220)
                      +++||+|.|.|++++.+...   +..|+++..... ..... ....++....+..|+|.+..+
T Consensus         7 ~idHv~i~V~D~~~a~~fY~---~~lGf~~v~~~~~~~~~~-~~~~~~l~~~~~~i~l~~~~~   65 (163)
T d1t47a1           7 GMDAVVFAVGNAKQAAHYYS---TAFGMQLVAYSGPENGSR-ETASYVLTNGSARFVLTSVIK   65 (163)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HTSCCEEEEEESGGGTCC-SEEEEEEEETTEEEEEEEESS
T ss_pred             eEeEEEEEeCCHHHHHHHHH---HHhCCeEEeeecccccce-eEEEEEEecCCEEEEEeccCC
Confidence            78999999999999999996   568998764322 21121 233444444567788887543

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.68  E-value=0.074  Score=38.60  Aligned_cols=58  Identities=12%  Similarity=-0.010  Sum_probs=42.7

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEeecC
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG   83 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~   83 (220)
                      ..+.|+++.|.|++++.+...+ .|.+++.+...-.+..+.+++..   .++..++|....+
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~---~gd~~~~~v~r~~  160 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKL---YGDVVLRYVSYKA  160 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEE---ETTEEEEEEEECC
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEc---cCCcEEEEEecCC
Confidence            5899999999999999999976 79998876554445567677653   2345666665443

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=92.42  E-value=0.22  Score=34.57  Aligned_cols=55  Identities=18%  Similarity=0.308  Sum_probs=39.9

Q ss_pred             ceeeeEEEEECCHHHHHHHHHHhcCCEEEEeecCCCCceeEEEeeecCCCceeEEEEEe
Q 027676           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY   80 (220)
Q Consensus        22 ~~l~Hi~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~   80 (220)
                      ..+.|+++.|.|+++..+..++ .|.++........+.....|+.-   +++.++||..
T Consensus        92 ~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~D---PdG~~iEl~e  146 (149)
T d1ss4a_          92 LGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRG---VEGILIGLAE  146 (149)
T ss_dssp             BEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEEC---GGGCEEEEEE
T ss_pred             cceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEEC---CCCCEEEEEE
Confidence            5789999999999999999976 89988654333334455556652   4677888864

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=91.84  E-value=0.27  Score=33.77  Aligned_cols=57  Identities=9%  Similarity=0.052  Sum_probs=39.0

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEE-----CCCCCEEEEEech
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-----DPDGWKTVLVDNE  211 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~-----DPdG~~iElv~~~  211 (220)
                      +++||++.|.|++++.+...   .-.|.+....... +.......+..     ...+..+|+++..
T Consensus         7 ~i~Hi~i~v~Dl~~a~~fY~---~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~el~~~~   68 (145)
T d1jc4a_           7 CIDHVAYACPDADEASKYYQ---ETFGWHELHREEN-PEQGVVEIMMAPAAKLTEHMTQVQVMAPL   68 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HHHCCEEEEEEEE-TTTTEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             EEeEEEEEeCCHHHHHHHHH---hhccCceeeeeee-cccceEEEeeeceeccccccchhhhhhhh
Confidence            78999999999999999996   5688887544332 22222333332     3566788888753

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=91.76  E-value=0.11  Score=36.26  Aligned_cols=32  Identities=9%  Similarity=0.191  Sum_probs=26.9

Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCC
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  184 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p  184 (220)
                      .|++||++.|.|++++.+...   +-.|+++....
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~---~vLG~~~~~~~   36 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYK---NVLGLRRVKMT   36 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHH---TTTCCEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHH---HHhCCeeEeee
Confidence            389999999999999999996   56899876543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=90.91  E-value=0.17  Score=36.91  Aligned_cols=30  Identities=20%  Similarity=0.288  Sum_probs=26.2

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      +++||+|.|.|++++.+...   ...|.++...
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~---~~LGf~~v~~   42 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFS---FGLGAPLAAR   42 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HHHTCCEEEE
T ss_pred             EEEEEEEEeCCHHHHHHHHH---HhhCceEEEE
Confidence            89999999999999999996   5799987654

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=89.07  E-value=0.57  Score=31.64  Aligned_cols=31  Identities=3%  Similarity=0.152  Sum_probs=26.4

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCC
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  184 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p  184 (220)
                      |++||++.|.|++++.+...   +..|.++....
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~---~~lG~~~~~~~   34 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILE---GVFDAREVYAS   34 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HHHCCEEEEEG
T ss_pred             cEeEEEEEeCCHHHHHHHHH---HhcCCEEEEEc
Confidence            68999999999999999987   56899887543

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.15  E-value=0.82  Score=32.67  Aligned_cols=36  Identities=22%  Similarity=0.193  Sum_probs=28.4

Q ss_pred             cccCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCC
Q 027676          146 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  184 (220)
Q Consensus       146 ~~~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p  184 (220)
                      ....-.++|+++.|.|++++++...   +-.|.++....
T Consensus        18 ~~~~~~l~Hi~l~V~Dl~~si~FY~---~vLG~~~~~~~   53 (176)
T d1qipa_          18 STKDFLLQQTMLRVKDPKKSLDFYT---RVLGMTLIQKC   53 (176)
T ss_dssp             GGTTCEEEEEEEECSCHHHHHHHHH---HTTCCEEEEEE
T ss_pred             CccceEEeEEEEEeCCHHHHHHHHH---HhhCCeEeeee
Confidence            3444589999999999999999995   45899876443

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.57  E-value=0.86  Score=33.11  Aligned_cols=55  Identities=15%  Similarity=0.103  Sum_probs=34.1

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCCcccCCCCceEEEEE-CCCCCEEEEEec
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDGWKTVLVDN  210 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~-DPdG~~iElv~~  210 (220)
                      .++||+|.|.|++++.+..    +..|.++...... +.+....+++. +...+.+.+...
T Consensus         5 rl~Hv~l~v~Dle~s~~FY----e~LGf~~~d~~~~-~~~~~~~~~~~~~~~~~~l~~~~~   60 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYL----EDLGFRVSEDIKD-SDGVTYAAWMHRKQTVHDTALTGG   60 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHH----HHTTCEEEEEEEC-TTCCEEEEEEESSSSSCSEEEEES
T ss_pred             EeeeEEEEcCCHHHHHHHH----HHCCCEEEEEEec-CCcceeeeeeccCccccceecccc
Confidence            4789999999999987766    4689997643221 12222333333 455566655543

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=85.45  E-value=0.75  Score=31.50  Aligned_cols=30  Identities=17%  Similarity=0.162  Sum_probs=25.1

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      ++.||+|.|.|++++.+...   +-.|.++...
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~---~vLG~~~~~~   33 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLT---QKLGLMEAGT   33 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HTTCCEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHH---HhhCCceeec
Confidence            68999999999999999885   3479987654

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=83.32  E-value=0.61  Score=33.73  Aligned_cols=32  Identities=13%  Similarity=0.168  Sum_probs=26.9

Q ss_pred             CceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecCC
Q 027676          150 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  184 (220)
Q Consensus       150 ~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~p  184 (220)
                      .|++||+|.|.|+++..+...   .-.|.++....
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~---~vLG~~~~~~~   42 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLT---EIFGYTEVSRN   42 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHH---HTTCCEEEEEC
T ss_pred             CCeeeEEEEeCCHHHHHHHHH---HHhCCEEEeec
Confidence            489999999999999999986   45899887553

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=82.81  E-value=0.52  Score=33.66  Aligned_cols=33  Identities=12%  Similarity=0.099  Sum_probs=27.3

Q ss_pred             cCCceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          148 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       148 ~~~g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      ...|++|+++.|.|++++.+...   .-.|.++...
T Consensus         7 ~~~GlgHv~l~v~D~e~t~~FY~---~vLG~~~~~~   39 (156)
T d1kw3b2           7 GDQGIGHFVRCVPDTAKAMAFYT---EVLGFVLSDI   39 (156)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHH---HTTCCEEEEE
T ss_pred             CCCCcceEEEecCCHHHHHHHHH---HhcCceeeeE
Confidence            34599999999999999999885   5699987643

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=81.17  E-value=1.1  Score=30.55  Aligned_cols=30  Identities=17%  Similarity=0.294  Sum_probs=25.4

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      |++||+|.|.|++++.+...   +-.|.++...
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~---~vLG~~~~~~   33 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWH---ELLGLTLHAR   33 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---TTSCCEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHH---HHhCCEEEEE
Confidence            78999999999999999885   4589988644

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=80.83  E-value=1.6  Score=30.90  Aligned_cols=30  Identities=13%  Similarity=0.260  Sum_probs=25.3

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHHHHHcCCeeecC
Q 027676          151 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  183 (220)
Q Consensus       151 g~~Hiaf~v~Dv~a~~~~l~~~~~~~G~~i~~~  183 (220)
                      .++||++.|.|++++.+...   +-.|.++...
T Consensus         5 rldHv~l~v~Dle~s~~FY~---~vLG~~~~~~   34 (162)
T d1mpya2           5 RFDHALMYGDELPATYDLFT---KVLGFYLAEQ   34 (162)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HTTCCEEEEE
T ss_pred             cccEEEEECCCHHHHHHHHH---HccCCEEEEE
Confidence            57899999999999999886   5689987643