Citrus Sinensis ID: 027699

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHAGGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGFNDPIEALREIRKRKDNWRG

cEEEEEccccccEEEEEEEcccccEEEEccccHHHHHHHHHHcccEEcEEEccccccccccHHHHHHHHccccEEEccccccccccccccccccEEEEcccEEEEEEEccccccccEEEEEcccccccccEEEccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccHHHHHHcccccccccHHHHHHHccccHHHHHHHHHHHHccccc

cEEEEEEEcccEEEEEEEcccccEEEEEccccHHHHHHHHHHcccEEEEEEcccccHHHHccHHHHHHHccccEEEEcccccccccEEEEccccEEEEcccEEEEEEEccccccEEEEEEEccccccccEEEEEccEcHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccEEHHHHHHHccccccccHHHHHHHccccHHHHHHHHHHHHHHccc

mkifhipclednYAYLIIEETtkeaavvdpvepEKIIEAAKQHGVNLTTVLTthhhwdhaggnekmkeMVPGIkvyggsldnvkgcthqvengdkfsigAHVNVlslhtpchtkghisyyvtgkegedpavftgdTLYTVKNLLFALtvepsnvkLQQKLAWAQNqrqaglptipstieeeletnpfmrvdlpelqklvgfndpIEALREIRKRKDNWRG

mkifhipclEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHAGGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQklvgfndpiealreirkrkdnwrg

MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQhgvnlttvltthhhWDHAGGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGFNDPIEALREIRKRKDNWRG

**IFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHAGGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLYTVKNLLFALTVEPSNVKLQQKLAWAQN********************PFMRVDLPELQKLVGFNDPIE**************

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		220	2.2.26 [Sep-21-2011]
O24496		258	Hydroxyacylglutathione hy	yes	no	1.0	0.852	0.620	4e-92
Q6P963		303	Hydroxyacylglutathione hy	yes	no	0.986	0.716	0.484	2e-61
Q5ZI23		310	Hydroxyacylglutathione hy	yes	no	0.986	0.7	0.480	5e-60
Q99KB8		309	Hydroxyacylglutathione hy	yes	no	0.986	0.702	0.468	8e-60
B4F6K2		313	Hydroxyacylglutathione hy	yes	no	0.986	0.693	0.476	1e-59
Q3B7M2		308	Hydroxyacylglutathione hy	yes	no	0.981	0.701	0.471	1e-59
Q16775		308	Hydroxyacylglutathione hy	yes	no	0.986	0.704	0.449	4e-59
O35952		309	Hydroxyacylglutathione hy	yes	no	0.986	0.702	0.468	4e-59
Q4R6C1		308	Hydroxyacylglutathione hy	N/A	no	0.986	0.704	0.453	9e-59
Q28333		280	Hydroxyacylglutathione hy	no	no	0.986	0.775	0.457	1e-58

>sp\|O24496\|GLO2C_ARATH Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2	Back alignment and function desciption

 Score =  337 bits (864), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 160/258 (62%), Positives = 193/258 (74%), Gaps = 38/258 (14%)

Query: 1   MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHA 60
           MKIFH+PCL+DNY+YLII+E+T +AAVVDPV+PEK+I +A++H   +  VLTTHHHWDHA
Sbjct: 1   MKIFHVPCLQDNYSYLIIDESTGDAAVVDPVDPEKVIASAEKHQAKIKFVLTTHHHWDHA 60

Query: 61  GGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYY 120
           GGNEK+K++VP IKVYGGSLD VKGCT  V+NGDK ++G  +N+L+LHTPCHTKGHISYY
Sbjct: 61  GGNEKIKQLVPDIKVYGGSLDKVKGCTDAVDNGDKLTLGQDINILALHTPCHTKGHISYY 120

Query: 121 VTGKEGEDPAVFTGDTL--------------------------------------YTVKN 142
           V GKEGE+PAVFTGDTL                                      YTVKN
Sbjct: 121 VNGKEGENPAVFTGDTLFVAGCGKFFEGTAEQMYQSLCVTLAALPKPTQVYCGHEYTVKN 180

Query: 143 LLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGFN 202
           L FALTVEP+N K+QQKLAWA+ QRQA LPTIPST+EEELETNPFMRVD PE+Q+ +G  
Sbjct: 181 LEFALTVEPNNGKIQQKLAWARQQRQADLPTIPSTLEEELETNPFMRVDKPEIQEKLGCK 240

Query: 203 DPIEALREIRKRKDNWRG 220
            PI+ +RE+R +KD WRG
Sbjct: 241 SPIDTMREVRNKKDQWRG 258

Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: 6

>sp\|Q6P963\|GLO2_DANRE Hydroxyacylglutathione hydrolase, mitochondrial OS=Danio rerio GN=hagh PE=2 SV=2	Back alignment and function description

>sp\|Q5ZI23\|GLO2_CHICK Hydroxyacylglutathione hydrolase, mitochondrial OS=Gallus gallus GN=HAGH PE=2 SV=1	Back alignment and function description

>sp\|Q99KB8\|GLO2_MOUSE Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus GN=Hagh PE=2 SV=2	Back alignment and function description

>sp\|B4F6K2\|GLO2_XENTR Hydroxyacylglutathione hydrolase, mitochondrial OS=Xenopus tropicalis GN=hagh PE=2 SV=1	Back alignment and function description

>sp\|Q3B7M2\|GLO2_BOVIN Hydroxyacylglutathione hydrolase, mitochondrial OS=Bos taurus GN=HAGH PE=2 SV=3	Back alignment and function description

>sp\|Q16775\|GLO2_HUMAN Hydroxyacylglutathione hydrolase, mitochondrial OS=Homo sapiens GN=HAGH PE=1 SV=2	Back alignment and function description

>sp\|O35952\|GLO2_RAT Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus GN=Hagh PE=1 SV=2	Back alignment and function description

>sp\|Q4R6C1\|GLO2_MACFA Hydroxyacylglutathione hydrolase, mitochondrial OS=Macaca fascicularis GN=HAGH PE=2 SV=2	Back alignment and function description

>sp\|Q28333\|GLO2_CALJA Hydroxyacylglutathione hydrolase, mitochondrial (Fragment) OS=Callithrix jacchus GN=HAGH PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		220
224128015		258	predicted protein [Populus trichocarpa]	1.0	0.852	0.682	2e-98
388509580		258	unknown [Lotus japonicus]	1.0	0.852	0.678	8e-98
255559751		258	hydroxyacylglutathione hydrolase, putati	1.0	0.852	0.658	4e-95
357490351		258	Hydroxyacylglutathione hydrolase [Medica	1.0	0.852	0.635	3e-93
449457385		258	PREDICTED: hydroxyacylglutathione hydrol	1.0	0.852	0.655	2e-92
225448353		258	PREDICTED: hydroxyacylglutathione hydrol	1.0	0.852	0.639	2e-92
76573347		258	unknown [Solanum tuberosum]	1.0	0.852	0.627	3e-92
78191468		258	hydroxyacylglutathione hydrolase cytopla	1.0	0.852	0.627	4e-92
312282419		258	unnamed protein product [Thellungiella h	1.0	0.852	0.643	5e-92
297833868		258	glyoxalase 2-2 [Arabidopsis lyrata subsp	1.0	0.852	0.631	6e-91

>gi\|224128015\|ref\|XP_002329233.1\| predicted protein [Populus trichocarpa] gi\|222871014\|gb\|EEF08145.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 176/258 (68%), Positives = 203/258 (78%), Gaps = 38/258 (14%)

Query: 1   MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHA 60
           MKI H+PCLEDNY+YLII+E+TKEAAVVDPVEPEK++ AA +HG++L  VLTTHHHWDHA
Sbjct: 1   MKILHVPCLEDNYSYLIIDESTKEAAVVDPVEPEKLVNAANEHGLHLKLVLTTHHHWDHA 60

Query: 61  GGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYY 120
           GGNEK+KEMVPGIKVYGGSLDNVKGCT++VENGDK S+GA VN+L+LHTPCHTKGHISYY
Sbjct: 61  GGNEKIKEMVPGIKVYGGSLDNVKGCTNKVENGDKVSLGADVNILALHTPCHTKGHISYY 120

Query: 121 VTGKEGEDPAVFTGDTL--------------------------------------YTVKN 142
           VTGKEGEDPAVFTGDTL                                      YTVKN
Sbjct: 121 VTGKEGEDPAVFTGDTLFIAGCGKFFEGTAEQMYQSLCVTLGSLPKPTQVYCGHEYTVKN 180

Query: 143 LLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGFN 202
           L FALTVEP +VK+Q+KL+WAQ QR+AGLPTIPSTIEEE+ETNPFMR +LP++Q  VG +
Sbjct: 181 LQFALTVEPDSVKIQEKLSWAQKQRRAGLPTIPSTIEEEMETNPFMRAELPDVQAKVGCH 240

Query: 203 DPIEALREIRKRKDNWRG 220
            P+EALR+IR  KDNWRG
Sbjct: 241 SPVEALRKIRLMKDNWRG 258

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|388509580\|gb\|AFK42856.1\| unknown [Lotus japonicus]	Back alignment and taxonomy information

>gi\|255559751\|ref\|XP_002520895.1\| hydroxyacylglutathione hydrolase, putative [Ricinus communis] gi\|223540026\|gb\|EEF41604.1\| hydroxyacylglutathione hydrolase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|357490351\|ref\|XP_003615463.1\| Hydroxyacylglutathione hydrolase [Medicago truncatula] gi\|355516798\|gb\|AES98421.1\| Hydroxyacylglutathione hydrolase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|449457385\|ref\|XP_004146429.1\| PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|225448353\|ref\|XP_002267471.1\| PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic [Vitis vinifera] gi\|297736644\|emb\|CBI25515.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|76573347\|gb\|ABA46778.1\| unknown [Solanum tuberosum]	Back alignment and taxonomy information

>gi\|78191468\|gb\|ABB29955.1\| hydroxyacylglutathione hydrolase cytoplasmic-like [Solanum tuberosum]	Back alignment and taxonomy information

>gi\|312282419\|dbj\|BAJ34075.1\| unnamed protein product [Thellungiella halophila]	Back alignment and taxonomy information

>gi\|297833868\|ref\|XP_002884816.1\| glyoxalase 2-2 [Arabidopsis lyrata subsp. lyrata] gi\|297330656\|gb\|EFH61075.1\| glyoxalase 2-2 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		220
TAIR\|locus:2103232		258	GLY2 [Arabidopsis thaliana (ta	0.627	0.534	0.666	9.3e-84
ZFIN\|ZDB-GENE-030131-8921		303	hagh "hydroxyacylglutathione h	0.618	0.448	0.503	4.2e-55
MGI\|MGI:95745		309	Hagh "hydroxyacyl glutathione	0.618	0.440	0.496	3.7e-54
UNIPROTKB\|Q3B7M2		308	HAGH "Hydroxyacylglutathione h	0.613	0.438	0.5	4.8e-54
UNIPROTKB\|G1K303		286	HAGH "Hydroxyacylglutathione h	0.618	0.475	0.482	1.3e-53
UNIPROTKB\|Q5ZI23		310	HAGH "Hydroxyacylglutathione h	0.618	0.438	0.482	1.3e-53
RGD\|2779		309	Hagh "hydroxyacyl glutathione	0.618	0.440	0.496	2.6e-53
UNIPROTKB\|O35952		309	Hagh "Hydroxyacylglutathione h	0.618	0.440	0.496	2.6e-53
UNIPROTKB\|Q16775		308	HAGH "Hydroxyacylglutathione h	0.618	0.441	0.474	4.2e-53
UNIPROTKB\|E2R7A0		309	HAGH "Uncharacterized protein"	0.618	0.440	0.482	1.8e-52

TAIR\|locus:2103232 GLY2 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 531 (192.0 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
 Identities = 92/138 (66%), Positives = 114/138 (82%)

Query:     1 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHA 60
             MKIFH+PCL+DNY+YLII+E+T +AAVVDPV+PEK+I +A++              WDHA
Sbjct:     1 MKIFHVPCLQDNYSYLIIDESTGDAAVVDPVDPEKVIASAEKHQAKIKFVLTTHHHWDHA 60

Query:    61 GGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYY 120
             GGNEK+K++VP IKVYGGSLD VKGCT  V+NGDK ++G  +N+L+LHTPCHTKGHISYY
Sbjct:    61 GGNEKIKQLVPDIKVYGGSLDKVKGCTDAVDNGDKLTLGQDINILALHTPCHTKGHISYY 120

Query:   121 VTGKEGEDPAVFTGDTLY 138
             V GKEGE+PAVFTGDTL+
Sbjct:   121 VNGKEGENPAVFTGDTLF 138

GO:0004416 "hydroxyacylglutathione hydrolase activity" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=ISM;ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA;TAS

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

ZFIN\|ZDB-GENE-030131-8921 hagh "hydroxyacylglutathione hydrolase" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

MGI\|MGI:95745 Hagh "hydroxyacyl glutathione hydrolase" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q3B7M2 HAGH "Hydroxyacylglutathione hydrolase, mitochondrial" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|G1K303 HAGH "Hydroxyacylglutathione hydrolase, mitochondrial" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5ZI23 HAGH "Hydroxyacylglutathione hydrolase, mitochondrial" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

RGD\|2779 Hagh "hydroxyacyl glutathione hydrolase" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|O35952 Hagh "Hydroxyacylglutathione hydrolase, mitochondrial" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|Q16775 HAGH "Hydroxyacylglutathione hydrolase, mitochondrial" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E2R7A0 HAGH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q31ND6	GLO2_SYNE7	3, ., 1, ., 2, ., 6	0.3629	0.9863	0.8410	yes	no
B8HMJ9	GLO2_CYAP4	3, ., 1, ., 2, ., 6	0.3424	0.9863	0.8476	yes	no
Q2JPX4	GLO2_SYNJB	3, ., 1, ., 2, ., 6	0.3501	0.9681	0.8452	yes	no
Q3MGD2	GLO2_ANAVT	3, ., 1, ., 2, ., 6	0.3255	0.9863	0.8443	yes	no
B7K3R6	GLO2_CYAP8	3, ., 1, ., 2, ., 6	0.3372	0.9863	0.8443	yes	no
Q3BWP5	GLO2_XANC5	3, ., 1, ., 2, ., 6	0.3046	0.9863	0.8509	yes	no
B1WUT9	GLO2_CYAA5	3, ., 1, ., 2, ., 6	0.3410	0.9863	0.8443	yes	no
Q8YZ99	GLO2_NOSS1	3, ., 1, ., 2, ., 6	0.3333	0.9863	0.8443	yes	no
B2IVH7	GLO2_NOSP7	3, ., 1, ., 2, ., 6	0.3100	0.9863	0.8443	yes	no
B0JW10	GLO2_MICAN	3, ., 1, ., 2, ., 6	0.3295	0.9727	0.8326	yes	no
Q2RP80	GLO2_RHORT	3, ., 1, ., 2, ., 6	0.3243	0.9636	0.8281	yes	no
B0BZI8	GLO2_ACAM1	3, ., 1, ., 2, ., 6	0.3294	0.9863	0.8443	yes	no
O24496	GLO2C_ARATH	3, ., 1, ., 2, ., 6	0.6201	1.0	0.8527	yes	no
Q0AM20	GLO2_MARMM	3, ., 1, ., 2, ., 6	0.3359	0.9636	0.8281	yes	no
Q2JVC3	GLO2_SYNJA	3, ., 1, ., 2, ., 6	0.3424	0.9681	0.8452	yes	no
Q60BX0	GLO2_METCA	3, ., 1, ., 2, ., 6	0.3333	0.9727	0.8359	yes	no
B7KEB4	GLO2_CYAP7	3, ., 1, ., 2, ., 6	0.3372	0.9863	0.8443	yes	no
Q5N5S6	GLO2_SYNP6	3, ., 1, ., 2, ., 6	0.3629	0.9863	0.8410	yes	no
Q7NG34	GLO2_GLOVI	3, ., 1, ., 2, ., 6	0.3229	0.9681	0.8452	yes	no
Q8DIF1	GLO2_THEEB	3, ., 1, ., 2, ., 6	0.35	0.9545	0.8333	yes	no
Q10Y41	GLO2_TRIEI	3, ., 1, ., 2, ., 6	0.3410	0.9863	0.8443	yes	no
B1XQ70	GLO2_SYNP2	3, ., 1, ., 2, ., 6	0.3217	0.9772	0.8301	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.2	0.976
3rd Layer	3.1.2.6	0.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_1250018	hydroxyacylglutathione hydrolase (EC-3.1.2.6) (259 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_kg.C_LG_IX000057	SubName- Full=Putative uncharacterized protein; (184 aa)	•	•	0.933
	estExt_Genewise1_v1.C_LG_XVIII2497	lactoylglutathione lyase (EC-4.4.1.5) (283 aa)	•	•	0.913
	estExt_Genewise1_v1.C_LG_IV1582	lactoylglutathione lyase (EC-4.4.1.5) (294 aa)	•	•	0.911
	gw1.XVIII.1215.1	lactoylglutathione lyase (EC-4.4.1.5) (284 aa)	•	•	0.910
	eugene3.01570036	lactoylglutathione lyase (EC-4.4.1.5) (356 aa)	•	•	0.907
	gw1.XVI.2049.1	D-lactate dehydrogenase (EC-1.1.2.4) (480 aa)	•		0.904
	gw1.163.23.1	hypothetical protein (85 aa)	•	•	0.903

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		220
PLN02469		258	PLN02469, PLN02469, hydroxyacylglutathione hydrola	1e-148
TIGR03413		248	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrol	5e-77
PLN02398		329	PLN02398, PLN02398, hydroxyacylglutathione hydrola	7e-56
PRK10241		251	PRK10241, PRK10241, hydroxyacylglutathione hydrola	3e-29
smart00849		177	smart00849, Lactamase_B, Metallo-beta-lactamase su	4e-22
COG0491		252	COG0491, GloB, Zn-dependent hydrolases, including	8e-21
pfam00753		148	pfam00753, Lactamase_B, Metallo-beta-lactamase sup	3e-14
PLN02962		251	PLN02962, PLN02962, hydroxyacylglutathione hydrola	3e-12

>gnl\|CDD\|178088 PLN02469, PLN02469, hydroxyacylglutathione hydrolase	Back alignment and domain information

 Score =  411 bits (1058), Expect = e-148
 Identities = 175/258 (67%), Positives = 199/258 (77%), Gaps = 38/258 (14%)

Query: 1   MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHA 60
           MKI  +PCLEDNYAYLII+E+TK+AAVVDPV+PEK+++AA +HG  +  VLTTHHHWDHA
Sbjct: 1   MKIIPVPCLEDNYAYLIIDESTKDAAVVDPVDPEKVLQAAHEHGAKIKLVLTTHHHWDHA 60

Query: 61  GGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYY 120
           GGNEK+K++VPGIKVYGGSLDNVKGCTH VENGDK S+G  VN+L+LHTPCHTKGHISYY
Sbjct: 61  GGNEKIKKLVPGIKVYGGSLDNVKGCTHPVENGDKLSLGKDVNILALHTPCHTKGHISYY 120

Query: 121 VTGKEGEDPAVFTGDTL--------------------------------------YTVKN 142
           VTGKEGEDPAVFTGDTL                                      YTVKN
Sbjct: 121 VTGKEGEDPAVFTGDTLFIAGCGKFFEGTAEQMYQSLCVTLGSLPKPTQVYCGHEYTVKN 180

Query: 143 LLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGFN 202
           L FALTVEP N KL+QKL WA+ QRQAGLPT+PSTIEEELETNPFMRVDLPE+Q+ VG  
Sbjct: 181 LKFALTVEPDNEKLKQKLEWAEKQRQAGLPTVPSTIEEELETNPFMRVDLPEIQEKVGCE 240

Query: 203 DPIEALREIRKRKDNWRG 220
            P+EALRE+RK KDNW+G
Sbjct: 241 SPVEALREVRKMKDNWKG 258

Length = 258

>gnl\|CDD\|234201 TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase	Back alignment and domain information

>gnl\|CDD\|215223 PLN02398, PLN02398, hydroxyacylglutathione hydrolase	Back alignment and domain information

>gnl\|CDD\|182327 PRK10241, PRK10241, hydroxyacylglutathione hydrolase; Provisional	Back alignment and domain information

>gnl\|CDD\|214854 smart00849, Lactamase_B, Metallo-beta-lactamase superfamily	Back alignment and domain information

>gnl\|CDD\|223565 COG0491, GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|216099 pfam00753, Lactamase_B, Metallo-beta-lactamase superfamily	Back alignment and domain information

>gnl\|CDD\|178547 PLN02962, PLN02962, hydroxyacylglutathione hydrolase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		220
PLN02469		258	hydroxyacylglutathione hydrolase	100.0
PLN02398		329	hydroxyacylglutathione hydrolase	100.0
PRK10241		251	hydroxyacylglutathione hydrolase; Provisional	100.0
TIGR03413		248	GSH_gloB hydroxyacylglutathione hydrolase. Members	100.0
KOG0813		265	consensus Glyoxylase [General function prediction	100.0
PLN02962		251	hydroxyacylglutathione hydrolase	100.0
KOG0814		237	consensus Glyoxylase [General function prediction	99.91
PRK11921		394	metallo-beta-lactamase/flavodoxin domain-containin	99.89
PRK05452		479	anaerobic nitric oxide reductase flavorubredoxin;	99.87
COG0491		252	GloB Zn-dependent hydrolases, including glyoxylase	99.85
smart00849		183	Lactamase_B Metallo-beta-lactamase superfamily. Ap	99.82
COG0426		388	FpaA Uncharacterized flavoproteins [Energy product	99.81
TIGR00649		422	MG423 conserved hypothetical protein. Contains an	99.79
PF00753		194	Lactamase_B: Metallo-beta-lactamase superfamily; I	99.74
PRK11244		250	phnP carbon-phosphorus lyase complex accessory pro	99.68
TIGR03675		630	arCOG00543 arCOG00543 universal archaeal KH-domain	99.67
PRK11539		755	ComEC family competence protein; Provisional	99.66
TIGR00361		662	ComEC_Rec2 DNA internalization-related competence	99.63
PRK00685		228	metal-dependent hydrolase; Provisional	99.61
COG0595		555	mRNA degradation ribonucleases J1/J2 (metallo-beta	99.59
TIGR03307		238	PhnP phosphonate metabolism protein PhnP. This fam	99.58
TIGR02651		299	RNase_Z ribonuclease Z. Processing of the 3-prime	99.57
PF14597		199	Lactamase_B_5: Metallo-beta-lactamase superfamily;	99.57
PRK02113		252	putative hydrolase; Provisional	99.54
PRK04286		298	hypothetical protein; Provisional	99.53
COG2333		293	ComEC Predicted hydrolase (metallo-beta-lactamase	99.52
PRK02126		334	ribonuclease Z; Provisional	99.51
TIGR02649		303	true_RNase_BN ribonuclease BN. Members of this pro	99.5
PRK05184		302	pyrroloquinoline quinone biosynthesis protein PqqB	99.48
COG1782		637	Predicted metal-dependent RNase, consists of a met	99.47
PRK00055		270	ribonuclease Z; Reviewed	99.45
COG1236		427	YSH1 Predicted exonuclease of the beta-lactamase f	99.45
TIGR02108		302	PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B.	99.44
KOG1136		501	consensus Predicted cleavage and polyadenylation s	99.38
COG1237		259	Metal-dependent hydrolases of the beta-lactamase s	99.37
PF12706		194	Lactamase_B_2: Beta-lactamase superfamily domain;	99.32
PRK11709		355	putative L-ascorbate 6-phosphate lactonase; Provis	99.28
COG1234		292	ElaC Metal-dependent hydrolases of the beta-lactam	99.19
PF13483		163	Lactamase_B_3: Beta-lactamase superfamily domain;	99.15
COG2015		655	Alkyl sulfatase and related hydrolases [Secondary	99.01
COG2220		258	Predicted Zn-dependent hydrolases of the beta-lact	98.99
KOG4736		302	consensus Uncharacterized conserved protein [Funct	98.95
KOG1137		668	consensus mRNA cleavage and polyadenylation factor	98.91
COG2248		304	Predicted hydrolase (metallo-beta-lactamase superf	98.81
COG1235		269	PhnP Metal-dependent hydrolases of the beta-lactam	98.77
KOG1135		764	consensus mRNA cleavage and polyadenylation factor	98.64
TIGR02650		277	RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me	98.6
KOG1361		481	consensus Predicted hydrolase involved in interstr	98.08
PF02112		335	PDEase_II: cAMP phosphodiesterases class-II; Inter	98.06
KOG2121		746	consensus Predicted metal-dependent hydrolase (bet	98.05
COG5212		356	PDE1 Low-affinity cAMP phosphodiesterase [Signal t	97.1
KOG3798		343	consensus Predicted Zn-dependent hydrolase (beta-l	96.68
PF13691		63	Lactamase_B_4: tRNase Z endonuclease	96.48
PF14234		285	DUF4336: Domain of unknown function (DUF4336)	95.41
KOG1138		653	consensus Predicted cleavage and polyadenylation s	91.89
KOG3592		934	consensus Microtubule-associated proteins [Cytoske	91.34

>PLN02469 hydroxyacylglutathione hydrolase	Back alignment and domain information

Probab=100.00  E-value=7.4e-47  Score=308.06  Aligned_cols=219  Identities=80%  Similarity=1.325  Sum_probs=198.3

Q ss_pred             CeEEEEceeCCeeEEEEEeCCCCeEEEEcCCChHHHHHHHHHcCCcccEEEecCCCCcccCchHHHHhhCCCCEEEcCCC
Q 027699            1 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHAGGNEKMKEMVPGIKVYGGSL   80 (220)
Q Consensus         1 m~v~~~~~~~~n~~~li~~~~~~~~iliD~g~~~~~~~~l~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~p~~~i~~~~~   80 (220)
                      |++.+++.+.+||+|||.++.+++++|||||+.+.+++.+++.+.+|++|++||.|+||++|+..|++.+|+++||++..
T Consensus         1 ~~i~~~~~~~dNy~Yli~d~~~~~~vlIDp~~~~~il~~l~~~g~~l~~Il~TH~H~DH~gG~~~l~~~~~~~~V~~~~~   80 (258)
T PLN02469          1 MKIIPVPCLEDNYAYLIIDESTKDAAVVDPVDPEKVLQAAHEHGAKIKLVLTTHHHWDHAGGNEKIKKLVPGIKVYGGSL   80 (258)
T ss_pred             CeEEEeccccceEEEEEEeCCCCeEEEECCCChHHHHHHHHHcCCcccEEEecCCCCccccCHHHHHHHCCCCEEEEech
Confidence            78999999999999999985456899999999999999999999999999999999999999999999998899999876


Q ss_pred             CCCCCCcEEcCCCCEEEeCCc-eeEEEEeCCCCCCCCEEEEEccCCCCCCeEEeCCcc----------------------
Q 027699           81 DNVKGCTHQVENGDKFSIGAH-VNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTL----------------------  137 (220)
Q Consensus        81 ~~~~~~~~~~~~g~~~~~g~~-~~i~~~~~pgHt~~~~~~~~~~~~~~~~ilfsGD~~----------------------  137 (220)
                      +..+.....+.+|+.+.+| + ..+++++|||||+|+++|+++...++.+++||||++                      
T Consensus        81 ~~~~~~~~~v~~gd~i~lg-~~~~~~vi~tPGHT~ghi~~~~~~~~~~~~~lFtGDtLf~~g~Gr~~~g~~~~~~~Sl~~  159 (258)
T PLN02469         81 DNVKGCTHPVENGDKLSLG-KDVNILALHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFIAGCGKFFEGTAEQMYQSLCV  159 (258)
T ss_pred             hcCCCCCeEeCCCCEEEEC-CceEEEEEECCCCCCCCEEEEeccCCCCCCEEEecCcccCCCcCCCCCCCHHHHHHHHHH
Confidence            5555556778999999998 6 689999999999999999997531112699999987                      


Q ss_pred             ----------------ccccccchhhccCCChHHHHHHHHHHHHhhhCCCCCCcCcHHHHHHhCCccccCcHHHHHHhCC
Q 027699          138 ----------------YTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGF  201 (220)
Q Consensus       138 ----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~hg~~~~~~~l~~e~~~n~~l~~~~~~~~~~~~~  201 (220)
                                      |+..++.|+.+++|++..+...++.+++++..+.+++||||++||++|||||+..++++++++.
T Consensus       160 ~l~~Lp~~t~vypGH~yt~~nl~Fa~~vep~n~~~~~~~~~~~~~~~~~~~t~pstl~~E~~~Npflr~~~~~~~~~~~~  239 (258)
T PLN02469        160 TLGSLPKPTQVYCGHEYTVKNLKFALTVEPDNEKLKQKLEWAEKQRQAGLPTVPSTIEEELETNPFMRVDLPEIQEKVGC  239 (258)
T ss_pred             HHHcCCCCeEEEcCCCCchhHHHHHHhhCCCCHHHHHHHHHHHHHHHCCCCcCCccHHHHHhhCCeecCCCHHHHHHhcC
Confidence                            7888999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CCHHHHHHHHHHhhccCCC
Q 027699          202 NDPIEALREIRKRKDNWRG  220 (220)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~  220 (220)
                      .++.++|++||++||+|.|
T Consensus       240 ~~~~~~f~~lR~~kd~f~~  258 (258)
T PLN02469        240 ESPVEALREVRKMKDNWKG  258 (258)
T ss_pred             CCHHHHHHHHHHHHhccCC
Confidence            8999999999999999965

>PLN02398 hydroxyacylglutathione hydrolase	Back alignment and domain information

>PRK10241 hydroxyacylglutathione hydrolase; Provisional	Back alignment and domain information

>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase	Back alignment and domain information

>KOG0813 consensus Glyoxylase [General function prediction only]	Back alignment and domain information

>PLN02962 hydroxyacylglutathione hydrolase	Back alignment and domain information

>KOG0814 consensus Glyoxylase [General function prediction only]	Back alignment and domain information

>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional	Back alignment and domain information

>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional	Back alignment and domain information

>COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only]	Back alignment and domain information

>smart00849 Lactamase_B Metallo-beta-lactamase superfamily	Back alignment and domain information

>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]	Back alignment and domain information

>TIGR00649 MG423 conserved hypothetical protein	Back alignment and domain information

>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain []	Back alignment and domain information

>PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional	Back alignment and domain information

>TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein	Back alignment and domain information

>PRK11539 ComEC family competence protein; Provisional	Back alignment and domain information

>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2	Back alignment and domain information

>PRK00685 metal-dependent hydrolase; Provisional	Back alignment and domain information

>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	Back alignment and domain information

>TIGR03307 PhnP phosphonate metabolism protein PhnP	Back alignment and domain information

>TIGR02651 RNase_Z ribonuclease Z	Back alignment and domain information

>PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B	Back alignment and domain information

>PRK02113 putative hydrolase; Provisional	Back alignment and domain information

>PRK04286 hypothetical protein; Provisional	Back alignment and domain information

>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>PRK02126 ribonuclease Z; Provisional	Back alignment and domain information

>TIGR02649 true_RNase_BN ribonuclease BN	Back alignment and domain information

>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional	Back alignment and domain information

>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only]	Back alignment and domain information

>PRK00055 ribonuclease Z; Reviewed	Back alignment and domain information

>COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B	Back alignment and domain information

>KOG1136 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]	Back alignment and domain information

>COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	Back alignment and domain information

>PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A	Back alignment and domain information

>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional	Back alignment and domain information

>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only]	Back alignment and domain information

>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A	Back alignment and domain information

>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	Back alignment and domain information

>KOG4736 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1137 consensus mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification]	Back alignment and domain information

>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only]	Back alignment and domain information

>KOG1135 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit) [RNA processing and modification]	Back alignment and domain information

>TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type	Back alignment and domain information

>KOG1361 consensus Predicted hydrolase involved in interstrand cross-link repair [Replication, recombination and repair]	Back alignment and domain information

>PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3	Back alignment and domain information

>KOG2121 consensus Predicted metal-dependent hydrolase (beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms]	Back alignment and domain information

>KOG3798 consensus Predicted Zn-dependent hydrolase (beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>PF13691 Lactamase_B_4: tRNase Z endonuclease	Back alignment and domain information

>PF14234 DUF4336: Domain of unknown function (DUF4336)	Back alignment and domain information

>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]	Back alignment and domain information

>KOG3592 consensus Microtubule-associated proteins [Cytoskeleton]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		220
1qh3_A		260	Human Glyoxalase Ii With Cacodylate And Acetate Ion		1e-50
1xm8_A		254	X-Ray Structure Of Glyoxalase Ii From Arabidopsis T		2e-31
2p18_A		311	Crystal Structure Of The Leishmania Infantum Glyoxa		1e-14
2qed_A		258	Crystal Structure Of Salmonella Thyphimurium Lt2 Gl		4e-12

>pdb|1QH3|A Chain A, Human Glyoxalase Ii With Cacodylate And Acetate Ions Present In The Active Site Length = 260

Back alignment and structure

Iteration: 1

Score = 195 bits (496), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 103/258 (39%), Positives = 145/258 (56%), Gaps = 41/258 (15%) Query: 1 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHA 60 MK+ +P L DNY YL+I++ TKEAA+VDPV+P+K+++AA++ WDHA Sbjct: 1 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60 Query: 61 GGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYY 120 GGNEK+ ++ G+KVYGG D + TH++ + +G+ +NV L TPCHT GHI Y+ Sbjct: 61 GGNEKLVKLESGLKVYGGD-DRIGALTHKITHLSTLQVGS-LNVKCLATPCHTSGHICYF 118 Query: 121 VTGKEG-EDPAVFTGDTL--------------------------------------YTVK 141 V+ G E PAVFTGDTL YT+ Sbjct: 119 VSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTIN 178 Query: 142 NLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGF 201 NL FA VEP N +++KLAWA+ + G PT+PST+ EE NPFMRV +Q+ G Sbjct: 179 NLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGE 238 Query: 202 NDPIEALREIRKRKDNWR 219 DP+ +R +R+ KD ++ Sbjct: 239 TDPVTTMRAVRREKDQFK 256

PyMOL of 1qh3

>pdb|1XM8|A Chain A, X-Ray Structure Of Glyoxalase Ii From Arabidopsis Thaliana Gene At2g31350 Length = 254

Back alignment and structure

>pdb|2P18|A Chain A, Crystal Structure Of The Leishmania Infantum Glyoxalase Ii Length = 311

Back alignment and structure

>pdb|2QED|A Chain A, Crystal Structure Of Salmonella Thyphimurium Lt2 Glyoxalase Ii Length = 258

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		220
1qh5_A		260	Glyoxalase II, protein (hydroxyacylglutathione hyd	1e-115
2qed_A		258	Hydroxyacylglutathione hydrolase; metallo-B- super	1e-105
1xm8_A		254	Glyoxalase II; structural genomics, protein struct	1e-105
2p18_A		311	Glyoxalase II; metalloprotein, beta sandwich, alph	2e-98
2xf4_A		210	Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A	1e-33
2zwr_A		207	Metallo-beta-lactamase superfamily protein; hydrol	9e-33
2gcu_A		245	Putative hydroxyacylglutathione hydrolase 3; ethyl	5e-29
3r2u_A		466	Metallo-beta-lactamase family protein; structural	5e-26
3tp9_A		474	Beta-lactamase and rhodanese domain protein; struc	6e-26
4efz_A		298	Metallo-beta-lactamase family protein; structural	3e-20
3m8t_A		294	'BLR6230 protein; subclass B3 beta-lactamase, zinc	5e-20
1k07_A		263	FEZ-1 beta-lactamase; monomer with alpha-beta/BETA	3e-18
2p97_A		201	Hypothetical protein; putative metal-dependent hyd	1e-16
1sml_A		269	Protein (penicillinase); metallo-beta-lactamase, a	6e-16
4ad9_A		289	Lactb2, beta-lactamase-like protein 2; hydrolase,	9e-16
1jjt_A		228	IMP-1 metallo beta-lactamase; metallo-beta-lactama	2e-15
2vw8_A		303	PA1000, PQSE; quinolone signal response protein, s	3e-15
4ax1_B		303	Metallo-beta-lactamase AIM-1; hydrolase, antibioti	7e-15
1ztc_A		221	Hypothetical protein TM0894; structural genomics,	4e-14
3adr_A		261	Putative uncharacterized protein ST1585; quorum se	7e-14
1a7t_A		232	Metallo-beta-lactamase; hydrolase (beta-lactamase)	2e-12
1mqo_A		227	Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd	8e-11
1m2x_A		223	Class B carbapenemase BLAB-1; alpha-beta/BETA-alph	1e-10
3l6n_A		219	Metallo-beta-lactamase; zinc, hydolase, antibiotic	4e-10
3dha_A		254	N-acyl homoserine lactone hydrolase; zinc bimetall	5e-09
2y8b_A		265	Metallo-B-lactamase; hydrolase, cephalosporins, an	5e-09
2r2d_A		276	AGR_PTI_140P, Zn-dependent hydrolases; lactonase,	8e-09
4eyb_A		270	Beta-lactamase NDM-1; metallo beta lactamase, anti	1e-08
3aj3_A		274	MLR6805 protein, 4-pyridoxolactonase; Zn-protein,	3e-07
3iog_A		227	Beta-lactamase; hydrolase, antibiotic resistance,	5e-07
2zo4_A		317	Metallo-beta-lactamase family protein; hydrolase;	1e-06
3q6v_A		233	Beta-lactamase; metalloenzyme, alpha-beta, hydrola	2e-06
3esh_A		280	Protein similar to metal-dependent hydrolase; stru	4e-06
1p9e_A		331	Methyl parathion hydrolase; Zn containing; 2.40A {	4e-06
2ohh_A		404	Type A flavoprotein FPRA; beta-lactamase like doma	6e-06
2q9u_A		414	A-type flavoprotein; flavodoxin like, beta lactama	1e-05
2fhx_A		246	SPM-1; metallo-beta-lactamase, dinuclear zinc, ant	2e-05
2p4z_A		284	Metal-dependent hydrolases of the beta-lactamase s	4e-05
1e5d_A		402	Rubredoxin\:oxygen oxidoreductase; oxygenreductase	5e-05
3hnn_A		262	Putative diflavin flavoprotein A 5; PSI-2, protein	2e-04
1ycg_A		398	Nitric oxide reductase; DIIRON site, oxidoreductas	2e-04

>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* Length = 260	Back alignment and structure

 Score =  327 bits (842), Expect = e-115
 Identities = 116/258 (44%), Positives = 157/258 (60%), Gaps = 41/258 (15%)

Query: 1   MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHA 60
           MK+  +P L DNY YL+I++ TKEAA+VDPV+P+K+++AA++HGV LTTVLTTHHHWDHA
Sbjct: 1   MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60

Query: 61  GGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYY 120
           GGNEK+ ++  G+KVYGG  D +   TH++ +     +G+  NV  L TPCHT GHI Y+
Sbjct: 61  GGNEKLVKLESGLKVYGGD-DRIGALTHKITHLSTLQVGSL-NVKCLATPCHTSGHICYF 118

Query: 121 VTGKEG-EDPAVFTGDTL--------------------------------------YTVK 141
           V+   G E PAVFTGDTL                                      YT+ 
Sbjct: 119 VSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTIN 178

Query: 142 NLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGF 201
           NL FA  VEP N  +++KLAWA+ +   G PT+PST+ EE   NPFMRV    +Q+  G 
Sbjct: 179 NLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGE 238

Query: 202 NDPIEALREIRKRKDNWR 219
            DP+  +R +R+ KD ++
Sbjct: 239 TDPVTTMRAVRREKDQFK 256

PyMOL of 1qh5

>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 Length = 258	Back alignment and structure

>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A Length = 254	Back alignment and structure

>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* Length = 311	Back alignment and structure

>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Length = 210	Back alignment and structure

>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A Length = 207	Back alignment and structure

>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} Length = 245	Back alignment and structure

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Length = 466	Back alignment and structure

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474	Back alignment and structure

>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} Length = 298	Back alignment and structure

>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Length = 294	Back alignment and structure

>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Length = 263	Back alignment and structure

>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 Length = 201	Back alignment and structure

>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Length = 269	Back alignment and structure

>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} Length = 289	Back alignment and structure

>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A Length = 228	Back alignment and structure

>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* Length = 303	Back alignment and structure

>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Length = 303	Back alignment and structure

>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Length = 221	Back alignment and structure

>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Length = 261	Back alignment and structure

>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Length = 232	Back alignment and structure

>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... Length = 227	Back alignment and structure

>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 Length = 223	Back alignment and structure

>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} Length = 219	Back alignment and structure

>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A Length = 254	Back alignment and structure

>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A Length = 265	Back alignment and structure

>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} Length = 276	Back alignment and structure

>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Length = 270	Back alignment and structure

>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A Length = 274	Back alignment and structure

>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A Length = 227	Back alignment and structure

>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} Length = 317	Back alignment and structure

>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A Length = 233	Back alignment and structure

>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Length = 280	Back alignment and structure

>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 Length = 331	Back alignment and structure

>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Length = 404	Back alignment and structure

>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Length = 414	Back alignment and structure

>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} Length = 246	Back alignment and structure

>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} Length = 284	Back alignment and structure

>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Length = 402	Back alignment and structure

>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* Length = 398	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		220
1qh5_A		260	Glyoxalase II, protein (hydroxyacylglutathione hyd	100.0
1xm8_A		254	Glyoxalase II; structural genomics, protein struct	100.0
2qed_A		258	Hydroxyacylglutathione hydrolase; metallo-B- super	100.0
2p18_A		311	Glyoxalase II; metalloprotein, beta sandwich, alph	100.0
4efz_A		298	Metallo-beta-lactamase family protein; structural	100.0
2gcu_A		245	Putative hydroxyacylglutathione hydrolase 3; ethyl	99.98
3r2u_A		466	Metallo-beta-lactamase family protein; structural	99.97
2xf4_A		210	Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A	99.97
3tp9_A		474	Beta-lactamase and rhodanese domain protein; struc	99.97
2zwr_A		207	Metallo-beta-lactamase superfamily protein; hydrol	99.96
1k07_A		263	FEZ-1 beta-lactamase; monomer with alpha-beta/BETA	99.95
3m8t_A		294	'BLR6230 protein; subclass B3 beta-lactamase, zinc	99.94
3l6n_A		219	Metallo-beta-lactamase; zinc, hydolase, antibiotic	99.94
4ad9_A		289	Lactb2, beta-lactamase-like protein 2; hydrolase,	99.93
1m2x_A		223	Class B carbapenemase BLAB-1; alpha-beta/BETA-alph	99.93
2zo4_A		317	Metallo-beta-lactamase family protein; hydrolase;	99.93
2vw8_A		303	PA1000, PQSE; quinolone signal response protein, s	99.93
4hl2_A		243	Beta-lactamase NDM-1; structural genomics, PSI-bio	99.93
1a7t_A		232	Metallo-beta-lactamase; hydrolase (beta-lactamase)	99.92
4eyb_A		270	Beta-lactamase NDM-1; metallo beta lactamase, anti	99.92
1mqo_A		227	Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd	99.92
1sml_A		269	Protein (penicillinase); metallo-beta-lactamase, a	99.92
2y8b_A		265	Metallo-B-lactamase; hydrolase, cephalosporins, an	99.91
3hnn_A		262	Putative diflavin flavoprotein A 5; PSI-2, protein	99.91
4dik_A		410	Flavoprotein; TM0755, electron transport, DI-iron	99.9
2fhx_A		246	SPM-1; metallo-beta-lactamase, dinuclear zinc, ant	99.9
1jjt_A		228	IMP-1 metallo beta-lactamase; metallo-beta-lactama	99.9
3iog_A		227	Beta-lactamase; hydrolase, antibiotic resistance,	99.89
4ax1_B		303	Metallo-beta-lactamase AIM-1; hydrolase, antibioti	99.88
3esh_A		280	Protein similar to metal-dependent hydrolase; stru	99.88
3dha_A		254	N-acyl homoserine lactone hydrolase; zinc bimetall	99.88
1ycg_A		398	Nitric oxide reductase; DIIRON site, oxidoreductas	99.87
2cfu_A		658	SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1	99.87
2ohh_A		404	Type A flavoprotein FPRA; beta-lactamase like doma	99.87
3q6v_A		233	Beta-lactamase; metalloenzyme, alpha-beta, hydrola	99.87
2q9u_A		414	A-type flavoprotein; flavodoxin like, beta lactama	99.87
2p97_A		201	Hypothetical protein; putative metal-dependent hyd	99.86
1e5d_A		402	Rubredoxin\:oxygen oxidoreductase; oxygenreductase	99.86
1p9e_A		331	Methyl parathion hydrolase; Zn containing; 2.40A {	99.86
3adr_A		261	Putative uncharacterized protein ST1585; quorum se	99.86
3aj3_A		274	MLR6805 protein, 4-pyridoxolactonase; Zn-protein,	99.85
1ztc_A		221	Hypothetical protein TM0894; structural genomics,	99.85
2r2d_A		276	AGR_PTI_140P, Zn-dependent hydrolases; lactonase,	99.85
2yhe_A		668	SEC-alkyl sulfatase; hydrolase, inversion, metallo	99.72
1zkp_A		268	Hypothetical protein BA1088; zinc binding protein,	99.82
3iek_A		431	Ribonuclease TTHA0252; metallo beta lactamase fold	99.78
3zq4_A		555	Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat	99.78
3g1p_A		258	Protein PHNP; C-P lyase, phosphodiesterase, phosph	99.77
3bk2_A		562	RNAse J, metal dependent hydrolase; endoribonuclea	99.76
2i7x_A		717	Protein CFT2; polyadenylation, metallo-B-lactamase	99.73
2i7t_A		459	Cleavage and polyadenylation specificity factor 73	99.72
1y44_A		320	Ribonuclease Z; zinc-dependent metal hydrolase, hy	99.7
2bib_A		547	CBPE, teichoic acid phosphorylcholine esterase/ ch	99.69
2cbn_A		306	Ribonuclease Z; phosphodiesterase beta lactamase t	99.68
2ycb_A		636	Beta-CAsp RNAse, cleavage and polyadenylation spec	99.68
3af5_A		651	Putative uncharacterized protein PH1404; archaeal	99.68
2az4_A		429	Hypothetical protein EF2904; structural genomics,	99.68
2e7y_A		280	TRNAse Z; tRNA maturation, metallo-beta-lactaMSe,	99.68
2xr1_A		640	Cleavage and polyadenylation specificity factor 1	99.68
3md7_A		293	Beta-lactamase-like; ssgcid, hydrolase, structural	99.67
3zwf_A		368	Zinc phosphodiesterase ELAC protein 1; beta-lactam	99.64
3kl7_A		235	Putative metal-dependent hydrolase; structural gen	99.62
2wyl_A		360	L-ascorbate-6-phosphate lactonase ULAG; hydrolase;	99.56
3rpc_A		264	Possible metal-dependent hydrolase; structural gen	99.53
3bv6_A		379	Metal-dependent hydrolase; metallo protein, beta-l	99.53
3jxp_A		321	Coenzyme PQQ synthesis protein B; alpha-beta prote	99.48
4b87_A		367	DNA cross-LINK repair 1A protein; dclre1A, DCLRE,	99.44
1vjn_A		220	Zn-dependent hydrolase of metallo-beta-lactamase s	99.42
3zdk_A		336	5' exonuclease apollo; hydrolase; HET: TLA; 2.16A	99.32
2p4z_A		284	Metal-dependent hydrolases of the beta-lactamase s	99.26
3h3e_A		267	Uncharacterized protein TM1679; structural genomic	98.92

>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*	Back alignment and structure

Probab=100.00  E-value=6.5e-42  Score=279.28  Aligned_cols=214  Identities=47%  Similarity=0.803  Sum_probs=173.2

Q ss_pred             CeEEEEceeCCeeEEEEEeCCCCeEEEEcCCChHHHHHHHHHcCCcccEEEecCCCCcccCchHHHHhhCCCCEEEcCCC
Q 027699            1 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHAGGNEKMKEMVPGIKVYGGSL   80 (220)
Q Consensus         1 m~v~~~~~~~~n~~~li~~~~~~~~iliD~g~~~~~~~~l~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~p~~~i~~~~~   80 (220)
                      |+|..++.++.|+||+|.++.+++++|||||....+.+.+++.+.++++|++||.|+||++|+..|.+.+|+++||+++.
T Consensus         1 m~i~~i~~~~~n~~yli~~~~~~~~vlID~G~~~~i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~~   80 (260)
T 1qh5_A            1 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDD   80 (260)
T ss_dssp             CEEEEEEETTTEEEEEEEETTTTEEEEESCSSHHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHSTTCEEEESCT
T ss_pred             CEEEEEEecCceEEEEEEECCCCEEEEEcCCCHHHHHHHHHHcCCCccEEEeCCCCccccCCHHHHHHHCCCCEEEECcc
Confidence            89999999999999999984347899999998888999999999899999999999999999999999998899999975


Q ss_pred             CCCCCCcEEcCCCCEEEeCCceeEEEEeCCCCCCCCEEEEE-ccCCCCCCeEEeCCccccccccchhhccCCChHHHHHH
Q 027699           81 DNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYV-TGKEGEDPAVFTGDTLYTVKNLLFALTVEPSNVKLQQK  159 (220)
Q Consensus        81 ~~~~~~~~~~~~g~~~~~g~~~~i~~~~~pgHt~~~~~~~~-~~~~~~~~ilfsGD~~~~~~~~~~~~~~~~~~~~~~~~  159 (220)
                      .. +.....+.+|+.+.+| +..++++++||||+|+++|++ .....+.+++|+||+++......+   ...+...+.++
T Consensus        81 ~~-~~~~~~~~~g~~~~~g-~~~~~vi~tPGHt~g~~~~~~~~~~~~~~~~lftGD~l~~~~~g~~---~~~~~~~~~~S  155 (260)
T 1qh5_A           81 RI-GALTHKITHLSTLQVG-SLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKF---YEGTADEMCKA  155 (260)
T ss_dssp             TS-TTCSEECCTTCEEEET-TEEEEEEECCSSSTTCEEEEEECSSSSSCCEEEEETTEETTEECCC---TTCCHHHHHHH
T ss_pred             cC-CCCCEEeCCCCEEEEC-CEEEEEEECCCCCCCCEEEEEeccCCCCCCEEEEcCccccCCcCCC---CCCCHHHHHHH
Confidence            43 3456778899999999 999999999999999999998 321011279999999843211111   11233344444


Q ss_pred             HH-HHHHh-------hhCC---------------------------------CCCCcCcHHHHHHhCCccccCcHHHHHH
Q 027699          160 LA-WAQNQ-------RQAG---------------------------------LPTIPSTIEEELETNPFMRVDLPELQKL  198 (220)
Q Consensus       160 l~-~~~~~-------~~hg---------------------------------~~~~~~~l~~e~~~n~~l~~~~~~~~~~  198 (220)
                      +. .+..+       |+||                                 .+++|||++.|+++|||||+..++++++
T Consensus       156 l~~~l~~l~~~~~v~pgHg~~~~~~~f~~~v~p~~~~l~~~~~~~~~~~~~~~~t~psti~~E~~~Npfl~~~~~~~~~~  235 (260)
T 1qh5_A          156 LLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQH  235 (260)
T ss_dssp             HHTTTTTSCTTCEEEESBCCHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCCCCCEEHHHHHHHCTTTTTTSHHHHHH
T ss_pred             HHHHHHcCCCCeEEEcCCCchhccHHHHHhhCCCcHHHHHHHHHHHHHHhcCCCcCCcCHHHHHhcCCcccCCCHHHHHH
Confidence            42 22222       5665                                 6778899999999999999999999999


Q ss_pred             hCCCCHHHHHHHHHHhhccCC
Q 027699          199 VGFNDPIEALREIRKRKDNWR  219 (220)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~  219 (220)
                      ++..++.++|++||+++|+|.
T Consensus       236 ~~~~~~~~~~~~lr~~k~~~~  256 (260)
T 1qh5_A          236 AGETDPVTTMRAVRREKDQFK  256 (260)
T ss_dssp             HTCSSHHHHHHHHHHHHHHCC
T ss_pred             hcCCCHHHHHHHHHHHHhccC
Confidence            988899999999999999995

PyMOL of 1qh5

>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A	Back alignment and structure

>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2	Back alignment and structure

>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*	Back alignment and structure

>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}	Back alignment and structure

>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}	Back alignment and structure

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}	Back alignment and structure

>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}	Back alignment and structure

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}	Back alignment and structure

>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A	Back alignment and structure

>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A	Back alignment and structure

>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A	Back alignment and structure

>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0	Back alignment and structure

>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}	Back alignment and structure

>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1	Back alignment and structure

>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}	Back alignment and structure

>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*	Back alignment and structure

>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A	Back alignment and structure

>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*	Back alignment and structure

>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A	Back alignment and structure

>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...	Back alignment and structure

>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A	Back alignment and structure

>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A	Back alignment and structure

>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*	Back alignment and structure

>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}	Back alignment and structure

>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A	Back alignment and structure

>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A	Back alignment and structure

>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B	Back alignment and structure

>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}	Back alignment and structure

>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A	Back alignment and structure

>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*	Back alignment and structure

>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*	Back alignment and structure

>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*	Back alignment and structure

>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A	Back alignment and structure

>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}	Back alignment and structure

>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12	Back alignment and structure

>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3	Back alignment and structure

>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5	Back alignment and structure

>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}	Back alignment and structure

>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A	Back alignment and structure

>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11	Back alignment and structure

>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}	Back alignment and structure

>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}	Back alignment and structure

>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9	Back alignment and structure

>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*	Back alignment and structure

>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}	Back alignment and structure

>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A	Back alignment and structure

>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*	Back alignment and structure

>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10	Back alignment and structure

>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A	Back alignment and structure

>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*	Back alignment and structure

>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*	Back alignment and structure

>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7	Back alignment and structure

>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}	Back alignment and structure

>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*	Back alignment and structure

>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10	Back alignment and structure

>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A	Back alignment and structure

>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}	Back alignment and structure

>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*	Back alignment and structure

>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}	Back alignment and structure

>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}	Back alignment and structure

>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*	Back alignment and structure

>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}	Back alignment and structure

>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}	Back alignment and structure

>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A	Back alignment and structure

>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}	Back alignment and structure

>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4	Back alignment and structure

>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}	Back alignment and structure

>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}	Back alignment and structure

>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		220
d1qh5a_		260	d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathio	6e-58
d1xm8a_		254	d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathio	3e-53
d2qeda1		251	d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglut	4e-46
d1e5da2		249	d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreducta	2e-09
d2aioa1		266	d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xa	6e-09
d2q0ia1		298	d.157.1.14 (A:1-298) Quinolone signal response pro	2e-08
d1k07a_		262	d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoriba	3e-08
d2p97a1		200	d.157.1.12 (A:1-200) Hypothetical protein Ava3068	4e-08
d1ycga2		249	d.157.1.3 (A:2-250) Nitric oxide reductase N-termi	6e-08
d1ztca1		207	d.157.1.11 (A:1-207) Hypothetical protein TM0894 {	7e-08
d2gmna1		264	d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Br	1e-07
d1vmea2		250	d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755,	1e-06
d1mqoa_		221	d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus	4e-06
d1jjta_		220	d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomo	4e-06
d1ko3a_		230	d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomo	2e-05
d1x8ha_		228	d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromona	2e-05
d1znba_		230	d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroi	9e-05
d2cfua2		505	d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudo	5e-04
d1p9ea_		294	d.157.1.5 (A:) Methyl parathion hydrolase {Pseudom	0.001
d1m2xa_		219	d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseob	0.001

>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Length = 260	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Glyoxalase II (hydroxyacylglutathione hydrolase)
domain: Glyoxalase II (hydroxyacylglutathione hydrolase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (460), Expect = 6e-58
 Identities = 113/258 (43%), Positives = 151/258 (58%), Gaps = 41/258 (15%)

Query: 1   MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHA 60
           MK+  +P L DNY YL+I++ TKEAA+VDPV+P+K+++AA++HGV LTTVLTTHHHWDHA
Sbjct: 1   MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60

Query: 61  GGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYY 120
           GGNEK+ ++  G+KVYGG  D+  G                +NV  L TPCHT GHI Y+
Sbjct: 61  GGNEKLVKLESGLKVYGG--DDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYF 118

Query: 121 VTGKEG-EDPAVFTGDTLY--------------------------------------TVK 141
           V+   G E PAVFTGDTL+                                      T+ 
Sbjct: 119 VSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTIN 178

Query: 142 NLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVGF 201
           NL FA  VEP N  +++KLAWA+ +   G PT+PST+ EE   NPFMRV    +Q+  G 
Sbjct: 179 NLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGE 238

Query: 202 NDPIEALREIRKRKDNWR 219
            DP+  +R +R+ KD ++
Sbjct: 239 TDPVTTMRAVRREKDQFK 256

PyMOL of d1qh5a_

>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 254	Back information, alignment and structure

>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} Length = 251	Back information, alignment and structure

>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Length = 249	Back information, alignment and structure

>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Length = 266	Back information, alignment and structure

>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Length = 298	Back information, alignment and structure

>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} Length = 262	Back information, alignment and structure

>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} Length = 200	Back information, alignment and structure

>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Length = 249	Back information, alignment and structure

>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Length = 207	Back information, alignment and structure

>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Length = 264	Back information, alignment and structure

>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 250	Back information, alignment and structure

>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Length = 221	Back information, alignment and structure

>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} Length = 220	Back information, alignment and structure

>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} Length = 230	Back information, alignment and structure

>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} Length = 228	Back information, alignment and structure

>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Length = 230	Back information, alignment and structure

>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Length = 505	Back information, alignment and structure

>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} Length = 294	Back information, alignment and structure

>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} Length = 219	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		220
d1xm8a_		254	Glyoxalase II (hydroxyacylglutathione hydrolase) {	100.0
d1qh5a_		260	Glyoxalase II (hydroxyacylglutathione hydrolase) {	100.0
d2qeda1		251	Glyoxalase II (hydroxyacylglutathione hydrolase) {	100.0
d2q0ia1		298	Quinolone signal response protein PqsE {Pseudomona	99.94
d2gmna1		264	Zn metallo-beta-lactamase {Bradyrhizobium japonicu	99.93
d1mqoa_		221	Zn metallo-beta-lactamase {Bacillus cereus [TaxId:	99.92
d2aioa1		266	Zn metallo-beta-lactamase {Xanthomonas maltophilia	99.92
d1k07a_		262	Zn metallo-beta-lactamase {Fluoribacter gormanii,	99.92
d1ycga2		249	Nitric oxide reductase N-terminal domain {Moorella	99.9
d1x8ha_		228	Zn metallo-beta-lactamase {Aeromonas hydrophila, C	99.89
d1m2xa_		219	Zn metallo-beta-lactamase {Chryseobacterium mening	99.89
d1ko3a_		230	Zn metallo-beta-lactamase {Pseudomonas aeruginosa,	99.89
d1e5da2		249	Rubredoxin oxygen:oxidoreductase (ROO), N-terminal	99.89
d1znba_		230	Zn metallo-beta-lactamase {Bacteroides fragilis [T	99.88
d1jjta_		220	Zn metallo-beta-lactamase {Pseudomonas aeruginosa,	99.88
d1ztca1		207	Hypothetical protein TM0894 {Thermotoga maritima [	99.85
d2cfua2		505	Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI	99.85
d1p9ea_		294	Methyl parathion hydrolase {Pseudomonas sp. WBC-3	99.83
d2p97a1		200	Hypothetical protein Ava3068 {Anabaena variabilis	99.83
d1vmea2		250	ROO-like flavoprotein TM0755, N-terminal domain {T	99.81
d2dkfa1		431	Putative RNA-degradation protein TTHA0252 {Thermus	99.8
d1zkpa1		244	Hypothetical protein BA1088 (BAS1016) {Bacillus an	99.74
d2i7ta1		451	Cleavage and polyadenylation specificity factor su	99.67
d2i7xa1		514	Cleavage factor two protein 2, CFT2 {Baker's yeast	99.66
d1wraa1		305	Teichoic acid phosphorylcholine esterase Pce (LytD	99.61
d2az4a1		183	Hypothetical protein EF2904 {Enterococcus faecalis	99.58
d1y44a1		307	Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId	99.45
d2cbna1		305	Ribonuclease Z (RNase Z) {Escherichia coli [TaxId:	99.4
d1vjna_		209	Hypothetical protein TM0207 {Thermotoga maritima [	99.18
d1xtoa_		304	Coenzyme PQQ synthesis protein B, PqqB {Pseudomona	99.17
d2e7ya1		280	Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax	98.73

>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Glyoxalase II (hydroxyacylglutathione hydrolase)
domain: Glyoxalase II (hydroxyacylglutathione hydrolase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.6e-46  Score=299.98  Aligned_cols=212  Identities=45%  Similarity=0.749  Sum_probs=191.3

Q ss_pred             CeEEEEceeCCeeEEEEEeCCCCeEEEEcCCChHHHHHHHHHcCCcccEEEecCCCCcccCchHHHHhhCCCCEEEcCCC
Q 027699            1 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQHGVNLTTVLTTHHHWDHAGGNEKMKEMVPGIKVYGGSL   80 (220)
Q Consensus         1 m~v~~~~~~~~n~~~li~~~~~~~~iliD~g~~~~~~~~l~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~p~~~i~~~~~   80 (220)
                      |+|..||++++||+|||.++.++++++||||+.+.+.+.+++.+.++.+|++||.|+||++|+..|.+.+ +++++.+..
T Consensus         1 M~i~~ip~~~dNy~Yli~d~~t~~avvIDPg~~~~i~~~l~~~~~~l~~Il~TH~H~DH~~g~~~l~~~~-~~~v~~~~~   79 (254)
T d1xm8a_           1 MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRY-GAKVIGSAM   79 (254)
T ss_dssp             CEEEEEEETTTEEEEEEECTTTCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHH-CCEEEEEGG
T ss_pred             CEEEEEeeeccEEEEEEEECCCCEEEEECCCCcHHHHHHHHHCCCceeEEecccCcccccCchHHHHhhc-CCcEEeccc
Confidence            9999999999999999998667889999999999999999999999999999999999999999999998 688888765


Q ss_pred             CC--CCCCcEEcCCCCEEEeCCceeEEEEeCCCCCCCCEEEEEccCCCCCCeEEeCCcc---------------------
Q 027699           81 DN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTL---------------------  137 (220)
Q Consensus        81 ~~--~~~~~~~~~~g~~~~~g~~~~i~~~~~pgHt~~~~~~~~~~~~~~~~ilfsGD~~---------------------  137 (220)
                      +.  .+.....+++|+.+.+| +.++++++|||||+||++|+++..    +++||||++                     
T Consensus        80 ~~~~~~~~~~~l~dgd~i~lg-~~~i~vl~TPGHT~ghi~~~~~~~----~~lftGDtLf~~g~Gr~~~g~~~~~~~sl~  154 (254)
T d1xm8a_          80 DKDRIPGIDMALKDGDKWMFA-GHEVHVMDTPGHTKGHISLYFPGS----RAIFTGDTMFSLSCGKLFEGTPKQMLASLQ  154 (254)
T ss_dssp             GGGGSTTEEEEECTTCEEEET-TEEEEEEECCSSSSSCEEEEEGGG----TEEEEETTEETTEECCCSSSCHHHHHHHHH
T ss_pred             ccccCCCCCEEecCCCeeeec-CcEEEEeeccCCCCCceEEEEccc----ceEEeCCEEEeecCCccccccHHHHHHHHH
Confidence            44  55567889999999999 999999999999999999999876    799999999                     


Q ss_pred             ----------------ccccccchhhccCCChHHHHHHHHHHHHhhhCCCCCCcCcHHHHHHhCCccccCcHHHHHHhC-
Q 027699          138 ----------------YTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPTIPSTIEEELETNPFMRVDLPELQKLVG-  200 (220)
Q Consensus       138 ----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~hg~~~~~~~l~~e~~~n~~l~~~~~~~~~~~~-  200 (220)
                                      |+..+..|+..+.|++..+...++.++++...+.+++||||+.|+++|||||+...+++++++ 
T Consensus       155 kl~~Lpd~t~v~~gH~y~~~n~~f~~~~~~~n~~l~~~~~~~~~~~~~~~~tvPstl~~E~~~Npflr~~~~~i~~~l~~  234 (254)
T d1xm8a_         155 KITSLPDDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRI  234 (254)
T ss_dssp             HHHTSCTTCEEEESBCCHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCGGGCTTCHHHHHHHTC
T ss_pred             HHHhCCcccEEeccCCccchhhhhhhhhCCcchhhhhHHHHHHHHHhcCCCcccccHHHHHHhCccccCCCHHHHHHhCC
Confidence                            666677777777788888888888888888888899999999999999999999988887765 


Q ss_pred             --CCCHHHHHHHHHHhhccC
Q 027699          201 --FNDPIEALREIRKRKDNW  218 (220)
Q Consensus       201 --~~~~~~~~~~~~~~~~~~  218 (220)
                        ..++.++|++||++||+|
T Consensus       235 ~~~~~~~~~f~~LR~~kd~f  254 (254)
T d1xm8a_         235 PEAADEAEALGIIRKAKDDF  254 (254)
T ss_dssp             CTTCCHHHHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHHHhhcCC
Confidence              678899999999999998

PyMOL of d1xm8a_

>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]}	Back information, alignment and structure

>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]}	Back information, alignment and structure

>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]}	Back information, alignment and structure

>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]}	Back information, alignment and structure

>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]}	Back information, alignment and structure

>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]}	Back information, alignment and structure

>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]}	Back information, alignment and structure

>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]}	Back information, alignment and structure

>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]}	Back information, alignment and structure

>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]}	Back information, alignment and structure

>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]}	Back information, alignment and structure

>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]}	Back information, alignment and structure

>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]}	Back information, alignment and structure

>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]}	Back information, alignment and structure

>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}	Back information, alignment and structure

>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]}	Back information, alignment and structure

>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]}	Back information, alignment and structure

>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure