Citrus Sinensis ID: 027729

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
MAPSKTTSPLPPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNCYPKG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHEEEEEEccccEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEccccEEEEEccEEEEEEEccEEEEEEEccccEEEccEEEEEEEEEEEEEEEEcccHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccEEEccccEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEccccEEEEEccEEEEEEEcccEEEEEEcccccccccccEEEEEEEEEEcHHHcccHHHHHHHHHcccEcEEEEEEEccEEEEEEEEEEEEEEEEEEEEEEccccEEEEccccccc
Coil and Loop (DISEMBL)
mapskttsplppatpsqphyytvlppqpqdenytilpyyylenprrnwYATIAISLILLAALLYvfwpsepelKIERLHLAHFHVRMKPAIcidislnvtlkvhnrdvysvnyksldvsvgyrgrklghvksnhGRVKALASSFIDAELQLKCVKVLSDVVYLLEDlargtvpfdtitkvtghlglfflefpleaRVSCEVLINTTSQTIARQNCYPKG
Flexible Loop (DISEMBL)
mapskttsplppatpsqPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVhnrdvysvnyksldvsvgyrGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLInttsqtiarqncypkg
Low Complexity Region (SEG)
MAPSKTTSPLPPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATiaislillaallYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNCYPKG
Disordered region (IsUnstruct)
********************YTVL******ENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIAR*******
Disordered Region (DISOPRED)
******************************************NPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNC****
Disordered Region (DISEMBL)
**************PSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNCYPKG
Disordered Region (DISPRO)
****************QPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNC****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPSKTTSPLPPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNCYPKG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	219
224073866	181	predicted protein [Populus trichocarpa]	0.785	0.950	0.586	1e-51
224058874	180	predicted protein [Populus trichocarpa]	0.721	0.877	0.575	7e-49
15218211	214	late embryogenesis abundant hydroxyproli	0.940	0.962	0.461	5e-48
297847614	214	hypothetical protein ARALYDRAFT_474353 [	0.926	0.948	0.470	6e-48
225442653	237	PREDICTED: uncharacterized protein LOC10	0.908	0.839	0.465	3e-47
297738839	218	unnamed protein product [Vitis vinifera]	0.776	0.779	0.520	1e-45
225445268	212	PREDICTED: uncharacterized protein LOC10	0.776	0.801	0.520	1e-45
255546523	336	conserved hypothetical protein [Ricinus	0.757	0.494	0.481	2e-44
255550052	215	conserved hypothetical protein [Ricinus	0.844	0.860	0.487	4e-43
356531257	257	PREDICTED: uncharacterized protein LOC10	0.776	0.661	0.470	6e-43

>gi|224073866|ref|XP_002304190.1| predicted protein [Populus trichocarpa] gi|222841622|gb|EEE79169.1| predicted protein [Populus trichocarpa]

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 102/174 (58%), Positives = 135/174 (77%), Gaps = 2/174 (1%)

Query: 46  RNW--YATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKV 103
           R W    T+ + L+LL+AL+YVFWPS+P +K+  L L    +   P I ID+SL VTL+V
Sbjct: 8   RRWPMITTVFLLLLLLSALVYVFWPSDPMIKVVGLRLDKIRIHTLPIINIDLSLYVTLRV 67

Query: 104 HNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYL 163
            N DVYS++++SLDV+V Y+G++LGHV+S+HG V+AL SS++DAE+ L+ + VLS VV L
Sbjct: 68  RNVDVYSMDFRSLDVAVRYKGKRLGHVRSDHGHVRALGSSYVDAEIDLRGISVLSGVVSL 127

Query: 164 LEDLARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNCYP 217
           LEDL RGTVPFDT+T+V+G LGL F  FPL+ARVSCEVL+NT +QTI RQ CYP
Sbjct: 128 LEDLGRGTVPFDTVTEVSGKLGLLFFGFPLKARVSCEVLVNTHNQTIVRQTCYP 181

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058874|ref|XP_002299644.1| predicted protein [Populus trichocarpa] gi|222846902|gb|EEE84449.1| predicted protein [Populus trichocarpa]

 Score =  199 bits (506), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 91/158 (57%), Positives = 122/158 (77%)

Query: 60  AALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVS 119
           + L+YVFWPS+P +K+ RL L   H+   P I IDISL V+LKV N DVYS++++SLDV+
Sbjct: 23  STLVYVFWPSDPTVKVVRLRLNKIHIHTLPIINIDISLYVSLKVRNVDVYSMDFRSLDVA 82

Query: 120 VGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITK 179
           V YRG++LGHV+S+HG V+AL SS++ A +    + VLSDVV LL+DLARGTVPFDT+T+
Sbjct: 83  VKYRGKRLGHVRSDHGHVRALGSSYVHAGVDFSGISVLSDVVSLLDDLARGTVPFDTVTE 142

Query: 180 VTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNCYP 217
           V+G LGL F  FP++A++ C VL+N  +QTI RQ CYP
Sbjct: 143 VSGRLGLLFFGFPMKAKLFCAVLVNINNQTIVRQTCYP 180

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218211|ref|NP_175643.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|12323119|gb|AAG51539.1|AC037424_4 hypothetical protein; 44111-43310 [Arabidopsis thaliana] gi|71905457|gb|AAZ52706.1| expressed protein [Arabidopsis thaliana] gi|332194666|gb|AEE32787.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/208 (46%), Positives = 139/208 (66%), Gaps = 2/208 (0%)

Query: 11  PPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALL-YVFWPS 69
           P ATPS P Y  +      + N  +L   +   P R  +  I+I LI  A++L Y+FWPS
Sbjct: 7   PKATPSLPDYKPLPSSSSHELNDAVLISSHPSPPSRRRF-IISIFLISFASILIYIFWPS 65

Query: 70  EPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGH 129
           +P +KI R+ ++H HV  +P   ID++L VTLKV N DVYS ++  LDV++ YRG+ LGH
Sbjct: 66  DPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTLGH 125

Query: 130 VKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFL 189
           V S+ G V A  SS++DAE +L  V V  DV++L+ DLA+G+V FDT+T+  G LG+ F 
Sbjct: 126 VSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLGVLFF 185

Query: 190 EFPLEARVSCEVLINTTSQTIARQNCYP 217
            FPL+A+V+C +L++T +QTI+RQ+C P
Sbjct: 186 RFPLKAKVACGILVDTVNQTISRQSCSP 213

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847614|ref|XP_002891688.1| hypothetical protein ARALYDRAFT_474353 [Arabidopsis lyrata subsp. lyrata] gi|297337530|gb|EFH67947.1| hypothetical protein ARALYDRAFT_474353 [Arabidopsis lyrata subsp. lyrata]

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 140/206 (67%), Gaps = 3/206 (1%)

Query: 13  ATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALL-YVFWPSEP 71
           ATPS P Y   LP    D+N  +L   +     R  +  I+I LI  A++L Y+FWPS+P
Sbjct: 10  ATPSLPDYKP-LPSSSHDQNDAVLISSHSSFTSRRRF-IISIFLISFASILIYIFWPSDP 67

Query: 72  ELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVK 131
            +KI R+ ++H HV  +P   ID++L VTLKV N DVYS ++  LDV++ YRG+ LGHV 
Sbjct: 68  RIKIVRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTLGHVS 127

Query: 132 SNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEF 191
           S+ G V A  SS++DAE +L  V V  DV++L+ DLA+G+V FDT+T+  G+LG++F  F
Sbjct: 128 SDGGHVTAFGSSYLDAEAELDGVTVFPDVIHLIHDLAKGSVEFDTVTETNGNLGVWFFRF 187

Query: 192 PLEARVSCEVLINTTSQTIARQNCYP 217
           PL+A+V+C +L+ T +QTI+RQ+C P
Sbjct: 188 PLKAKVACGILVITVNQTISRQSCSP 213

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442653|ref|XP_002279706.1| PREDICTED: uncharacterized protein LOC100258307 [Vitis vinifera]

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 94/202 (46%), Positives = 138/202 (68%), Gaps = 3/202 (1%)

Query: 20  YYTVLPPQPQDE-NYTILPYYY-LENPRRNWYATI-AISLILLAALLYVFWPSEPELKIE 76
           YYT +P  P  E NY +LP Y  L + R N +  + A S++LL A  +V WPS+P++ I 
Sbjct: 36  YYTPVPSHPASERNYVVLPLYIPLLHRRCNRFRLLTAASVLLLVASTFVLWPSDPDVSIV 95

Query: 77  RLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGR 136
           RL L    V   P + +D+S+++ +KV N D+YS+NY+SL V++ YRG++LG+V S  G 
Sbjct: 96  RLRLRRIAVHTFPRLSLDVSMSLMVKVRNVDLYSMNYRSLHVAIEYRGKELGNVTSEEGH 155

Query: 137 VKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEAR 196
           V+A  SS +DA L+L  V VLSDV+++LEDLA+GT+P DT+T+V G +G  F + PL  +
Sbjct: 156 VRARGSSLVDASLELNGVAVLSDVIFVLEDLAKGTIPIDTVTEVRGSMGFLFFQLPLRTK 215

Query: 197 VSCEVLINTTSQTIARQNCYPK 218
           VSC+V +NT +Q +  QNCYP+
Sbjct: 216 VSCQVYVNTNTQKVLHQNCYPE 237

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738839|emb|CBI28084.3| unnamed protein product [Vitis vinifera]

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/171 (52%), Positives = 125/171 (73%), Gaps = 1/171 (0%)

Query: 47  NWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNR 106
           N +   A+ L + AA+ Y+ +PS+P +++  LHL    V   P I +D+SL++T++V NR
Sbjct: 42  NAFLACAVFLSISAAV-YLLYPSDPTVQVVGLHLNSVQVHTSPVISLDLSLDLTIRVRNR 100

Query: 107 DVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLED 166
           D +S +Y SL  SVGYRGR+LG V S+ G ++A  SS+I+A L L  ++VL DV YLLED
Sbjct: 101 DFFSFSYTSLTASVGYRGRRLGFVNSSGGYLRARGSSYINATLDLDGIEVLHDVFYLLED 160

Query: 167 LARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNCYP 217
           LARG++PFDT+++V G LGLFF E PL+ARVSCEV +NT++QTI  Q+CYP
Sbjct: 161 LARGSIPFDTVSEVRGKLGLFFFEIPLKARVSCEVYVNTSNQTIIHQDCYP 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445268|ref|XP_002284574.1| PREDICTED: uncharacterized protein LOC100254347 [Vitis vinifera]

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/171 (52%), Positives = 125/171 (73%), Gaps = 1/171 (0%)

Query: 47  NWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNR 106
           N +   A+ L + AA+ Y+ +PS+P +++  LHL    V   P I +D+SL++T++V NR
Sbjct: 42  NAFLACAVFLSISAAV-YLLYPSDPTVQVVGLHLNSVQVHTSPVISLDLSLDLTIRVRNR 100

Query: 107 DVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLED 166
           D +S +Y SL  SVGYRGR+LG V S+ G ++A  SS+I+A L L  ++VL DV YLLED
Sbjct: 101 DFFSFSYTSLTASVGYRGRRLGFVNSSGGYLRARGSSYINATLDLDGIEVLHDVFYLLED 160

Query: 167 LARGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNCYP 217
           LARG++PFDT+++V G LGLFF E PL+ARVSCEV +NT++QTI  Q+CYP
Sbjct: 161 LARGSIPFDTVSEVRGKLGLFFFEIPLKARVSCEVYVNTSNQTIIHQDCYP 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546523|ref|XP_002514321.1| conserved hypothetical protein [Ricinus communis] gi|223546777|gb|EEF48275.1| conserved hypothetical protein [Ricinus communis]

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 80/166 (48%), Positives = 120/166 (72%)

Query: 53  AISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVN 112
           AI+++ L+A +Y  +PS+P L++ R+ L H HV   P   +D+S ++ ++V NRD +S++
Sbjct: 70  AITILFLSAAVYFLYPSDPSLQLARIQLNHIHVNSSPKFTLDLSFSLLIRVKNRDFFSLD 129

Query: 113 YKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTV 172
           Y +LDVSVGYRG++LG V S  G V+   SS+I A L L  ++++ DV YL+EDLARG +
Sbjct: 130 YDTLDVSVGYRGKELGVVSSKGGNVRPRGSSYISAALDLNGLEIVHDVFYLIEDLARGVI 189

Query: 173 PFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNCYPK 218
           PFDT T V G LG FF + P++A+VSCEV +NT +QTI R++C+P+
Sbjct: 190 PFDTDTMVNGELGFFFFKIPIKAKVSCEVYVNTVNQTIVREDCHPQ 235

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550052|ref|XP_002516077.1| conserved hypothetical protein [Ricinus communis] gi|223544982|gb|EEF46497.1| conserved hypothetical protein [Ricinus communis]

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/197 (48%), Positives = 129/197 (65%), Gaps = 12/197 (6%)

Query: 19  HYYTVLPPQPQDENYTIL--------PYYYLENPRRNWYATIAISLILLAALLYVFWPSE 70
           HYYT +P Q  D+NY +L        P   L  PRR    T  I   LL +++Y+FWPS+
Sbjct: 16  HYYTPIPCQ-HDDNYVVLQPLDHHRFPTIRLP-PRRILIVTGVI--FLLISVIYLFWPSD 71

Query: 71  PELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHV 130
           P LKI RL L   H+   P I ID+SL+VT+KV N DVYS+++  LD+++ YRG++LGHV
Sbjct: 72  PTLKIVRLRLNKLHIHTLPIINIDVSLHVTVKVRNVDVYSMDFTHLDIALRYRGKRLGHV 131

Query: 131 KSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLE 190
           +S  G V+ALASS++DAEL+   V VLSDVV+LLEDLARG VPFDT+TKV G  G  F  
Sbjct: 132 RSGQGHVRALASSYVDAELEFSGVGVLSDVVFLLEDLARGKVPFDTVTKVDGKFGFLFFG 191

Query: 191 FPLEARVSCEVLINTTS 207
            PL+  +   +++  + 
Sbjct: 192 MPLKDMLEIVIVLEISK 208

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531257|ref|XP_003534194.1| PREDICTED: uncharacterized protein LOC100793858 [Glycine max]

 Score =  179 bits (455), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 80/170 (47%), Positives = 116/170 (68%)

Query: 49  YATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDV 108
           Y+      +L+A   ++ +PS+PE+++ R+ L    +R  P   +D+S ++T+KV NRD 
Sbjct: 71  YSAALFLFLLVAGAAFLLYPSDPEIRLARIRLDRIGIRTNPRPILDLSFSLTVKVRNRDF 130

Query: 109 YSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLA 168
           +S++Y SL VSVGYRGR+LG V +  G ++A  SS++DA L +   +V+ D  YLLED+A
Sbjct: 131 FSLSYDSLTVSVGYRGRQLGFVTAGGGSIRARGSSYVDATLTIDGFEVIYDAFYLLEDIA 190

Query: 169 RGTVPFDTITKVTGHLGLFFLEFPLEARVSCEVLINTTSQTIARQNCYPK 218
           +G +PFDT T+V G LGLFF   PL+A VSCEV +N   QTI RQ+CYPK
Sbjct: 191 KGVIPFDTDTRVEGKLGLFFFTVPLKATVSCEVDVNINQQTIVRQDCYPK 240

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	219
TAIR|locus:2142040	215	AT4G13270 "AT4G13270" [Arabido	0.904	0.920	0.413	1.6e-38
TAIR|locus:2018154	227	AT1G52330 "AT1G52330" [Arabido	0.844	0.814	0.438	8.9e-38
TAIR|locus:2080320	235	AT3G54200 "AT3G54200" [Arabido	0.684	0.638	0.238	2.2e-11
TAIR|locus:504955821	189	AT3G05975 "AT3G05975" [Arabido	0.689	0.798	0.201	0.00037

TAIR|locus:2142040 AT4G13270 "AT4G13270" [Arabidopsis thaliana (taxid:3702)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 84/203 (41%), Positives = 124/203 (61%)

Query:    21 YTVLPP-QPQDENYTILPYYYLENPR--RNWYATXXXXXXXX--XXXXYVFWPSEPELKI 75
             YT LP  QP      + PY     P   RN   +              Y+ +PS+P++ +
Sbjct:    13 YTPLPSSQPSQSVILLTPYRRHRRPSLLRNLRCSLLFTAVILLLSAAVYLLYPSDPDITV 72

Query:    76 ERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHG 135
              R++L H  V     I +D+S ++T+KV NRD +S++Y SL VS+GYRGR+LG VKS  G
Sbjct:    73 SRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRGRELGLVKSKGG 132

Query:   136 RVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEA 195
              +KA  SS+IDA L+L  ++V+ DV+YL+ DLA+G +PFDTI +V G LG+     P++ 
Sbjct:   133 HLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDLGVLLFNIPIQG 192

Query:   196 RVSCEVLINTTSQTIARQNCYPK 218
             +VSCEV +N  +Q I+ Q+C+ K
Sbjct:   193 KVSCEVYVNVNNQKISHQDCHRK 215

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2018154 AT1G52330 "AT1G52330" [Arabidopsis thaliana (taxid:3702)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 82/187 (43%), Positives = 112/187 (59%)

Query:    11 PPATPSQPHYYTVLPPQPQDE-NYTILPYYYLENPRRNWYATXXXXXXXXXXXXYVFWPS 69
             P ATPS P Y   LP     E N  +L   +   P R  +              Y+FWPS
Sbjct:     7 PKATPSLPDYKP-LPSSSSHELNDAVLISSHPSPPSRRRFIISIFLISFASILIYIFWPS 65

Query:    70 EPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGH 129
             +P +KI R+ ++H HV  +P   ID++L VTLKV N DVYS ++  LDV++ YRG+ LGH
Sbjct:    66 DPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTLGH 125

Query:   130 VKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFL 189
             V S+ G V A  SS++DAE +L  V V  DV++L+ DLA+G+V FDT+T+  G LG+ F 
Sbjct:   126 VSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLGVLFF 185

Query:   190 EFPLEAR 196
              FPL+ R
Sbjct:   186 RFPLKVR 192

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2080320 AT3G54200 "AT3G54200" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 37/155 (23%), Positives = 76/155 (49%)

Query:    65 VFWPSEPELKIERLHLAHFHVRMKPA---ICIDISLNVTLKVHNRDVYSVNYKSLDVSVG 121
             +F P  P   I+ + +      + P    + ++++LNV L + N +    +Y S    + 
Sbjct:    76 LFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLN 135

Query:   122 YRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVT 181
             YRG+ +G       R+ A  +  ++  L L   ++LS+   LL D+  G +P +T  KVT
Sbjct:   136 YRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSET-QLLSDVMAGVIPLNTFVKVT 194

Query:   182 GHLGLF-FLEFPLEARVSCEVLINTTSQTIARQNC 215
             G + +    +  +++  SC++ I+ + + +  Q+C
Sbjct:   195 GKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHC 229

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:504955821 AT3G05975 "AT3G05975" [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 0.00037, P = 0.00037
 Identities = 31/154 (20%), Positives = 72/154 (46%)

Query:    65 VFWPSEPELKI--ERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGY 122
             VF P  P L+     +     ++ +   + ++ +L + + + N +V    YK+++  V Y
Sbjct:    30 VFKPKHPILQTVSSTVDGISTNISLPYEVQLNFTLTLEMLLKNPNVADFEYKTVENLVYY 89

Query:   123 RGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTG 182
             R   +G++      + A  S  +   L L+  K ++++  +++D+  G +  +T  K+ G
Sbjct:    90 RDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLDKFVANLGDIVQDVLHGKIVMETRAKMPG 149

Query:   183 HLGLF-FLEFPLEARVSCEVLINTTSQTIARQNC 215
              + L    + PL++   C +++   S  +  Q C
Sbjct:   150 KITLLGIFKIPLDSISHCNLVLGFPSMVVEDQVC 183


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      219       207   0.00099  111 3  11 22  0.48    32
                                                     31  0.47    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  180 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.75u 0.18s 19.93t   Elapsed:  00:00:01
  Total cpu time:  19.75u 0.18s 19.93t   Elapsed:  00:00:01
  Start:  Sat May 11 06:45:46 2013   End:  Sat May 11 06:45:47 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.III.1321.1 hypothetical protein (181 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	219
PLN03160	219	PLN03160, PLN03160, uncharacterized protein; Provi	3e-10
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	1e-04

>gnl|CDD|215609 PLN03160, PLN03160, uncharacterized protein; Provisional

 Score = 57.4 bits (139), Expect = 3e-10
 Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 30/232 (12%)

Query: 1   MAPSKTTSPLPPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRN----WYATIAISL 56
           MA ++   PL PA               ++E    L     +  RRN         A  L
Sbjct: 1   MAETEQVRPLAPAA--------FRLRSDEEEATNHL----KKTRRRNCIKCCGCITATLL 48

Query: 57  ILLAALLY----VFWPSEPELK-----IERLHLAHFHVRMKPAICIDISLNVTLKVHNRD 107
           IL   +L     VF   +P +K     + +L L +           +I+L   + V N +
Sbjct: 49  ILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTT---LRPGTNITLIADVSVKNPN 105

Query: 108 VYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDL 167
           V S  Y +   ++ Y G  +G  ++  G+ KA  +  ++  + +   K+LS V  LL D+
Sbjct: 106 VASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS-VPGLLTDI 164

Query: 168 ARGTVPFDTITKVTGHLG-LFFLEFPLEARVSCEVLINTTSQTIARQNCYPK 218
           + G +  ++ T++ G +  L  ++  +  +++C + +N TSQ I  Q C   
Sbjct: 165 SSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCTMTVNITSQAIQGQKCKRH 216

Length = 219

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 100 TLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNH-GRVKALASSFIDAELQLKCVKVLS 158
           TL+V N + + + Y  L   + Y G++L    S   G V A  ++ ++  + +     L 
Sbjct: 1   TLRVRNPNSFPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLEVPVTVS----LD 56

Query: 159 DVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEARVSCE 200
           D+  LL+DL    +      +    +G           +S E
Sbjct: 57  DLARLLKDLLAVGLELPYTLRGRLKVGGPVK-GSRTVPLSKE 97

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	219
PLN03160	219	uncharacterized protein; Provisional	100.0
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	99.83
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.52
smart00769	100	WHy Water Stress and Hypersensitive response.	99.08
COG5608	161	LEA14-like dessication related protein [Defense me	98.43
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.15
PF14155	112	DUF4307: Domain of unknown function (DUF4307)	94.02
PRK05529	255	cell division protein FtsQ; Provisional	84.25

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=5e-41  Score=282.68  Aligned_cols=203  Identities=19%  Similarity=0.315  Sum_probs=167.0

Q ss_pred             CCCCCCCCccccCCCCCCCCcEEEeecccccCCccchhh-----hHHHHHHHHHhheeEEecCCCeEEEEeEEEeeEEeC
Q 027729           12 PATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYA-----TIAISLILLAALLYVFWPSEPELKIERLHLAHFHVR   86 (219)
Q Consensus        12 ~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~-----~v~i~i~~~~l~~~vl~P~~P~~~v~~~~l~~~~~~   86 (219)
                      |+.|.+|+..+.+++..+   ..-.++.+||+++++|++     ++++++++++++|++||||+|+|+++++++++|+++
T Consensus         6 ~~~p~a~~~~~~~~d~~~---~~~~~~~~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~   82 (219)
T PLN03160          6 QVRPLAPAAFRLRSDEEE---ATNHLKKTRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELI   82 (219)
T ss_pred             cCCCCCCCcccccCchhh---cCcchhccccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeec
Confidence            566777777776665422   111133333333322322     233344456677889999999999999999999986


Q ss_pred             C--CCCceEEEEEEEEEEEECCCceEEEEcCeEEEEEECCEEEeeeeeCCeeecCcceEEEEeeeEEeeeeeccchHHHH
Q 027729           87 M--KPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLL  164 (219)
Q Consensus        87 ~--~~~~~l~~~~~~~l~v~NPN~~~i~y~~~~~~v~Y~g~~vG~~~v~~~~~~a~~~~~v~~~v~~~~~~v~~~~~~L~  164 (219)
                      +  .++..+|++++++|+++|||+++|+|+++++.++|+|+.+|++.+|+|+|++++++.+++++.+.+.++.++ .+|.
T Consensus        83 ~~~~~~~~~n~tl~~~v~v~NPN~~~~~Y~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~~-~~L~  161 (219)
T PLN03160         83 NNTTLRPGTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILSV-PGLL  161 (219)
T ss_pred             cCCCCceeEEEEEEEEEEEECCCceeEEEcCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceeccc-hhHH
Confidence            4  234578999999999999999999999999999999999999999999999999999999999999888765 7899


Q ss_pred             HhhcCCeeeEEEEEEEEEEEEEE-EEeeceEEEEEEEEEEecCCceeeccccccC
Q 027729          165 EDLARGTVPFDTITKVTGHLGLF-FLEFPLEARVSCEVLINTTSQTIARQNCYPK  218 (219)
Q Consensus       165 ~D~~~G~v~l~~~~~v~g~v~~~-~~~~~~~~~v~C~v~v~~~~~~i~~~~C~~k  218 (219)
                      +|+++|.++|+++++++|||+++ +++++++++++|++.|+..++.+.+++|+++
T Consensus       162 ~D~~~G~v~l~~~~~v~gkVkv~~i~k~~v~~~v~C~v~V~~~~~~i~~~~C~~~  216 (219)
T PLN03160        162 TDISSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCTMTVNITSQAIQGQKCKRH  216 (219)
T ss_pred             HHhhCCeEEEEEEEEEEEEEEEEEEEEEEEEEEEEeEEEEECCCCEEeccEeccc
Confidence            99999999999999999999999 6688999999999999999999999999976

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=99.83  E-value=8.4e-19  Score=147.43  Aligned_cols=125  Identities=14%  Similarity=0.296  Sum_probs=112.7

Q ss_pred             CCCCCCcEEEeecccccCCccc--hhh--hHHHHHHHHHhheeEEecCCCeEEEEeEEEeeEEeCCCCCceEEEEEEEEE
Q 027729           26 PQPQDENYTILPYYYLENPRRN--WYA--TIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTL  101 (219)
Q Consensus        26 ~~~~~~~~~~~p~~~~r~~~~~--~~~--~v~i~i~~~~l~~~vl~P~~P~~~v~~~~l~~~~~~~~~~~~l~~~~~~~l  101 (219)
                      --||+|+||||||+|||+++||  +++  .|++|+++.+|++|+|+||...++-.+++...+.++... ..+.++++..|
T Consensus        52 ~eqe~qLVALIPy~DqRLKPrRTklyV~~sV~~CLl~~~L~iFFLfPRsV~v~~~gv~s~~V~f~~~~-~~v~l~itn~l  130 (238)
T PF07092_consen   52 REQENQLVALIPYSDQRLKPRRTKLYVFLSVLLCLLLSGLVIFFLFPRSVTVSPVGVKSVTVSFNPDK-STVQLNITNTL  130 (238)
T ss_pred             ccchhcEEEEEeccccccCCceeEEEeeHHHHHHHHHHHheEEEEeCcEEEEecCcEEEEEEEEeCCC-CEEEEEEEEEE
Confidence            4599999999999999999999  555  788999999999999999999999999999988887543 36899999999


Q ss_pred             EEECCCceEEEEcCeEEEEEECCEEEeeeeeCCe-eecCcceEEEEeeeEE
Q 027729          102 KVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHG-RVKALASSFIDAELQL  151 (219)
Q Consensus       102 ~v~NPN~~~i~y~~~~~~v~Y~g~~vG~~~v~~~-~~~a~~~~~v~~~v~~  151 (219)
                      +++|+|++++...++++++.|....+|++..... .+++++.+++.+++..
T Consensus       131 NIsN~NFy~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~t  181 (238)
T PF07092_consen  131 NISNPNFYPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVKT  181 (238)
T ss_pred             EccCCCEEEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEeeE
Confidence            9999999999999999999999999999988766 9999999998887654

The function of this family is unknown.

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.52  E-value=1.3e-13  Score=101.28  Aligned_cols=97  Identities=25%  Similarity=0.388  Sum_probs=75.8

Q ss_pred             EEEEECCCceEEEEcCeEEEEEECCEEEe-eeeeCCeeecCcceEEEEeeeEEeeeeeccchHHHHHhhcCCeeeEEEEE
Q 027729          100 TLKVHNRDVYSVNYKSLDVSVGYRGRKLG-HVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTIT  178 (219)
Q Consensus       100 ~l~v~NPN~~~i~y~~~~~~v~Y~g~~vG-~~~v~~~~~~a~~~~~v~~~v~~~~~~v~~~~~~L~~D~~~G~v~l~~~~  178 (219)
                      +|+++|||.++++|++++++++|+|+.+| ....++|.|++++++.+..++.++...+   ...+.++. +|..++++.+
T Consensus         1 ~l~v~NPN~~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l---~~~l~~~~-~~~~~~~v~~   76 (101)
T PF03168_consen    1 TLSVRNPNSFGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL---PRLLKDLL-AGRVPFDVTY   76 (101)
T ss_dssp             EEEEEESSSS-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH---HHHHHHHH-HTTSCEEEEE
T ss_pred             CEEEECCCceeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH---HHHHHhhh-ccccceEEEE
Confidence            58999999999999999999999999999 6678999999999999998888777665   24555556 6778888888


Q ss_pred             EEEEEEEE-E-EEeeceEEEEEEE
Q 027729          179 KVTGHLGL-F-FLEFPLEARVSCE  200 (219)
Q Consensus       179 ~v~g~v~~-~-~~~~~~~~~v~C~  200 (219)
                      +++|++++ + .+..+..+.++|+
T Consensus        77 ~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   77 RIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEcccceeeeEEEeEEeE
Confidence            99999995 3 2334555555553

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=99.08  E-value=2e-09  Score=79.87  Aligned_cols=85  Identities=19%  Similarity=0.414  Sum_probs=69.9

Q ss_pred             eEEEEEEEEEEEECCCceEEEEcCeEEEEEECCEEEeeeeeC-CeeecCcceEEEEeeeEEeeeeeccchHHHHHhhcCC
Q 027729           92 CIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSN-HGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARG  170 (219)
Q Consensus        92 ~l~~~~~~~l~v~NPN~~~i~y~~~~~~v~Y~g~~vG~~~v~-~~~~~a~~~~~v~~~v~~~~~~v~~~~~~L~~D~~~G  170 (219)
                      ..+.++.+.+++.|||.+++.+++++.+++|+|..+|++..+ .+.+++++++.+.+++++. ...   ...+..++.+|
T Consensus        12 ~~~~~~~l~l~v~NPN~~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~-~~~---~~~~~~~l~~~   87 (100)
T smart00769       12 GLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVN-LFL---AEALIWHIANG   87 (100)
T ss_pred             ceEEEEEEEEEEECCCCCccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEee-hhH---hHHHHHhhccC
Confidence            578889999999999999999999999999999999999985 7899999999999999884 222   35667777766


Q ss_pred             e-eeEEEEEEEEEEE
Q 027729          171 T-VPFDTITKVTGHL  184 (219)
Q Consensus       171 ~-v~l~~~~~v~g~v  184 (219)
                      . +++    ++.|++
T Consensus        88 ~~~~y----~l~g~l   98 (100)
T smart00769       88 EEIPY----RLDGKL   98 (100)
T ss_pred             CCccE----EEEEEE
Confidence            4 333    455554

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=98.43  E-value=4.5e-05  Score=60.35  Aligned_cols=107  Identities=15%  Similarity=0.231  Sum_probs=78.0

Q ss_pred             CCCeEEEEeEEEeeEEeCCCCCceEEEEEEEEEEEECCCceEEEEcCeEEEEEECCEEEeeeee-CCeeecCcceEEEEe
Q 027729           69 SEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKS-NHGRVKALASSFIDA  147 (219)
Q Consensus        69 ~~P~~~v~~~~l~~~~~~~~~~~~l~~~~~~~l~v~NPN~~~i~y~~~~~~v~Y~g~~vG~~~v-~~~~~~a~~~~~v~~  147 (219)
                      ++|.+.--.+..-.+.-       ....+-.+++++|||-+++-..++...++-+|..+|++.. .++.+++++..++++
T Consensus        31 ~~p~ve~~ka~wGkvt~-------s~~EiV~t~KiyNPN~fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv  103 (161)
T COG5608          31 KKPGVESMKAKWGKVTN-------SETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDV  103 (161)
T ss_pred             CCCCceEEEEEEEEEec-------cceEEEEEEEecCCCCcceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEE
Confidence            46665544444444332       3345778999999999999999999999999999999985 668999999999999


Q ss_pred             eeEEeeeeeccchHHHHHhhcCCee-eEEEEEEEEEEEEEE
Q 027729          148 ELQLKCVKVLSDVVYLLEDLARGTV-PFDTITKVTGHLGLF  187 (219)
Q Consensus       148 ~v~~~~~~v~~~~~~L~~D~~~G~v-~l~~~~~v~g~v~~~  187 (219)
                      ++.++-.++   ...+...+++|+- ++.  +++.|.++++
T Consensus       104 ~l~~d~~~~---ke~w~~hi~ngErs~Ir--~~i~~~v~vg  139 (161)
T COG5608         104 PLRLDNSKI---KEWWVTHIENGERSTIR--VRIKGVVKVG  139 (161)
T ss_pred             EEEEehHHH---HHHHHHHhhccCcccEE--EEEEEEEEEc
Confidence            998876665   2345567777763 343  3444555554

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.15  E-value=0.0015  Score=58.98  Aligned_cols=62  Identities=15%  Similarity=0.345  Sum_probs=43.8

Q ss_pred             eeEEecCCCeEEEEeEEEeeEEeCCCCCceEEEEEEEEEEEECCCceEEEEcCeEEEEEECCEEEee
Q 027729           63 LYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGH  129 (219)
Q Consensus        63 ~~vl~P~~P~~~v~~~~l~~~~~~~~~~~~l~~~~~~~l~v~NPN~~~i~y~~~~~~v~Y~g~~vG~  129 (219)
                      .|+|---.|--.|.=+.+.++-.+     .-.+-|+++|.+.|||.+.|..++.++.||-+-.-+|.
T Consensus       321 gFv~AttKpL~~v~v~~I~NVlaS-----~qELmfdl~V~A~NPn~~~V~I~d~dldIFAKS~yvg~  382 (387)
T PF12751_consen  321 GFVFATTKPLTDVQVVSIQNVLAS-----EQELMFDLTVEAFNPNWFTVTIDDMDLDIFAKSRYVGT  382 (387)
T ss_pred             HhhhhcCcccccceEEEeeeeeec-----cceEEEeeEEEEECCCeEEEEeccceeeeEecCCccCc
Confidence            355555555555555555555432     34556889999999999999999999999877665553

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PF14155 DUF4307: Domain of unknown function (DUF4307)

Probab=94.02  E-value=1.1  Score=33.91  Aligned_cols=87  Identities=10%  Similarity=0.219  Sum_probs=41.6

Q ss_pred             hHHHHHHHHHhheeEEe-cCCCeEEEEeEEEeeEEeCCCCCceEEEEEEEEEEEECCCc-eEEEEcCeEEEEEECCEEEe
Q 027729           51 TIAISLILLAALLYVFW-PSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDV-YSVNYKSLDVSVGYRGRKLG  128 (219)
Q Consensus        51 ~v~i~i~~~~l~~~vl~-P~~P~~~v~~~~l~~~~~~~~~~~~l~~~~~~~l~v~NPN~-~~i~y~~~~~~v~Y~g~~vG  128 (219)
                      .+++++++++++|+.+. -..+++   +.+..+|+..++.  .++++|+++-   +|.. ..=...    ...|++.++|
T Consensus        11 ~v~~vv~~~~~~w~~~~~~~~~~v---~~~~~gf~vv~d~--~v~v~f~Vtr---~~~~~a~C~Vr----A~~~d~aeVG   78 (112)
T PF14155_consen   11 AVLVVVAGAVVAWFGYSQFGSPPV---SAEVIGFEVVDDS--TVEVTFDVTR---DPGRPAVCIVR----ALDYDGAEVG   78 (112)
T ss_pred             HHHHHHHHHHHhHhhhhhccCCCc---eEEEEEEEECCCC--EEEEEEEEEE---CCCCCEEEEEE----EEeCCCCEEE
Confidence            44455555556665553 556665   4445555554332  4555444432   2442 111111    1247788888


Q ss_pred             eeeeCCeeecCcceEEEEeeeEEe
Q 027729          129 HVKSNHGRVKALASSFIDAELQLK  152 (219)
Q Consensus       129 ~~~v~~~~~~a~~~~~v~~~v~~~  152 (219)
                      .-.+   .+|+.+...+..++.+.
T Consensus        79 rreV---~vp~~~~~~~~~~v~v~   99 (112)
T PF14155_consen   79 RREV---LVPPSGERTVRVTVTVR   99 (112)
T ss_pred             EEEE---EECCCCCcEEEEEEEEE
Confidence            7543   24444444444444433

>PRK05529 cell division protein FtsQ; Provisional

Probab=84.25  E-value=1.3  Score=38.22  Aligned_cols=26  Identities=19%  Similarity=0.272  Sum_probs=17.1

Q ss_pred             HHHhheeEEecCCCeEEEEeEEEeeEEe
Q 027729           58 LLAALLYVFWPSEPELKIERLHLAHFHV   85 (219)
Q Consensus        58 ~~~l~~~vl~P~~P~~~v~~~~l~~~~~   85 (219)
                      ++++++++|+  .|.|.+..+++++-..
T Consensus        48 l~~l~~~~~~--Sp~~~v~~I~V~Gn~~   73 (255)
T PRK05529         48 LLLFVMLSAY--SPLLALRSIEVAGNMR   73 (255)
T ss_pred             HHHHHHHhee--CCceEEEEEEEECCcc
Confidence            3333334443  7999999999986553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	219
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.9
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.75
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.48

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.90  E-value=4.8e-09  Score=84.36  Aligned_cols=100  Identities=11%  Similarity=0.192  Sum_probs=80.6

Q ss_pred             CCCeEEEEeEEEeeEEeCCCCCceEEEEEEEEEEEECCCceEEEEcCeEEEEEECCEEEeeeeeCC-eeecCcceEEEEe
Q 027729           69 SEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNH-GRVKALASSFIDA  147 (219)
Q Consensus        69 ~~P~~~v~~~~l~~~~~~~~~~~~l~~~~~~~l~v~NPN~~~i~y~~~~~~v~Y~g~~vG~~~v~~-~~~~a~~~~~v~~  147 (219)
                      +.|++++.++++.+++..       .++|.+.++|+|||.+++.+.+++.++.-+|..++++.++. +.+++++++.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l~-------~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~V  115 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD-------GVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDV  115 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS-------SEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc-------eEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEE
Confidence            799999999999988753       25688999999999999999999999999999999999865 6999999999999


Q ss_pred             eeEEeeeeeccchHHHHHhhcC-CeeeEEEEEE
Q 027729          148 ELQLKCVKVLSDVVYLLEDLAR-GTVPFDTITK  179 (219)
Q Consensus       148 ~v~~~~~~v~~~~~~L~~D~~~-G~v~l~~~~~  179 (219)
                      ++++....+    ..+.+|+.+ +.++++++++
T Consensus       116 pv~v~~~~l----~~~~~~l~~~~~i~Y~L~g~  144 (174)
T 1yyc_A          116 PVKVAYSIA----VSLMKDMCTDWDIDYQLDIG  144 (174)
T ss_dssp             EEEESHHHH----HHTCCCCCSSEEECEEEEEE
T ss_pred             EEEEEHHHH----HHHHHhcCCCCccceEEEEE
Confidence            988775433    334455543 4566654433

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.75  E-value=6.7e-09  Score=81.73  Aligned_cols=103  Identities=17%  Similarity=0.222  Sum_probs=81.4

Q ss_pred             CCCeEEEEeEEEeeEEeCCCCCceEEEEEEEEEEEECCCceEEEEcCeEEEEEECCEEEeeeeeC-CeeecCcceEEEEe
Q 027729           69 SEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSN-HGRVKALASSFIDA  147 (219)
Q Consensus        69 ~~P~~~v~~~~l~~~~~~~~~~~~l~~~~~~~l~v~NPN~~~i~y~~~~~~v~Y~g~~vG~~~v~-~~~~~a~~~~~v~~  147 (219)
                      +.|++++.++++.+++.       ..++|.+.++|+|||-+++.+.+++.++.-+|..++++..+ .+.+++++++.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~-------~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~v   92 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR-------DSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CSCCCBCSEEEECCCTT-------TEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred             CCCEEEEEEeEEeccCc-------ceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEE
Confidence            68999999999887754       34568899999999999999999999999999999999874 47999999999999


Q ss_pred             eeEEeeeeeccchHHHHHhhc-CCeeeEEEEEEEEEEEEE
Q 027729          148 ELQLKCVKVLSDVVYLLEDLA-RGTVPFDTITKVTGHLGL  186 (219)
Q Consensus       148 ~v~~~~~~v~~~~~~L~~D~~-~G~v~l~~~~~v~g~v~~  186 (219)
                      ++++....+    ..+.+|+. ++.++++    ++|++.+
T Consensus        93 pv~v~~~~l----~~~~~~l~~~~~i~Y~----l~g~l~i  124 (151)
T 1xo8_A           93 PVVVPYSIL----FNLARDVGVDWDIDYE----LQIGLTI  124 (151)
T ss_dssp             CCCEEHHHH----HHHHHHHHHHSEEEEE----EEEEEEE
T ss_pred             EEEEEHHHH----HHHHHhcccCCcccEE----EEEEEEE
Confidence            988875433    44455553 4556664    5555554

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.48  E-value=1.4e-06  Score=67.16  Aligned_cols=73  Identities=18%  Similarity=0.241  Sum_probs=61.3

Q ss_pred             EEEEEEEEEECCCceEEEEcCeEEEEEECCEEEeeee-eCCeeecCcceEEEEeeeEEeeeeeccchHHHHHhhcCC
Q 027729           95 ISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVK-SNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARG  170 (219)
Q Consensus        95 ~~~~~~l~v~NPN~~~i~y~~~~~~v~Y~g~~vG~~~-v~~~~~~a~~~~~v~~~v~~~~~~v~~~~~~L~~D~~~G  170 (219)
                      ..|.+.+++.|||.+++.+++++..+..+|..+|+|. ...+.+++++++.+.+++.++-.++..   .+.+.+.+|
T Consensus        18 t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~---~~~~hi~ng   91 (136)
T 3but_A           18 TEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE---WWVTHIANG   91 (136)
T ss_dssp             EEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT---HHHHHHHTT
T ss_pred             EEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH---HHHHHhhcC
Confidence            4588899999999999999999999999999999997 578899999999999999888766643   344444455

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	219
d1xo8a_	151	b.1.25.1 (A:) Putative dessication related protein	5e-05

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 151

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 20/128 (15%), Positives = 45/128 (35%), Gaps = 14/128 (10%)

Query: 70  EPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGH 129
           +PE  +  + L   +          +     + V N   +S+    +  +    GR++G 
Sbjct: 21  KPEGSVTDVDLKDVNRD-------SVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGK 73

Query: 130 VKSNH-GRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARG-TVPFDTITKVTGHLGLF 187
            K    G +KA   + +D  + +      S +  L  D+     + ++    +T  L + 
Sbjct: 74  GKIPDPGSLKAKDMTALDIPVVVP----YSILFNLARDVGVDWDIDYELQIGLTIDLPVV 129

Query: 188 F-LEFPLE 194
                P+ 
Sbjct: 130 GEFTIPIS 137

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	219
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.81

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.81  E-value=1.3e-09  Score=83.96  Aligned_cols=106  Identities=16%  Similarity=0.193  Sum_probs=83.0

Q ss_pred             ecCCCeEEEEeEEEeeEEeCCCCCceEEEEEEEEEEEECCCceEEEEcCeEEEEEECCEEEeeeee-CCeeecCcceEEE
Q 027729           67 WPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKS-NHGRVKALASSFI  145 (219)
Q Consensus        67 ~P~~P~~~v~~~~l~~~~~~~~~~~~l~~~~~~~l~v~NPN~~~i~y~~~~~~v~Y~g~~vG~~~v-~~~~~~a~~~~~v  145 (219)
                      +-+.|++++.++++.+++..       .+++.++++|.|||.+++..++++.+++.+|..++++.. ..+.+++++++.+
T Consensus        18 ~~~kPev~l~~v~i~~v~~~-------~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v   90 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRD-------SVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTAL   90 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTT-------EECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEE
T ss_pred             CCCCCeEEEEEEEeeecccc-------eEEEEEEEEEECCCCCceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEE
Confidence            45689999999999988653       456889999999999999999999999999999999986 4569999999999


Q ss_pred             EeeeEEeeeeeccchHHHHHhhcC-CeeeEEEEEEEEEEEEEE
Q 027729          146 DAELQLKCVKVLSDVVYLLEDLAR-GTVPFDTITKVTGHLGLF  187 (219)
Q Consensus       146 ~~~v~~~~~~v~~~~~~L~~D~~~-G~v~l~~~~~v~g~v~~~  187 (219)
                      .+++++.-..+    ..+.+|+.+ +.+++    +++|++.+.
T Consensus        91 ~vpv~v~~~~l----~~~~~~i~~~~~i~Y----~l~g~l~~d  125 (151)
T d1xo8a_          91 DIPVVVPYSIL----FNLARDVGVDWDIDY----ELQIGLTID  125 (151)
T ss_dssp             EECCCEEHHHH----HHHHHHHHHHSEEEE----EEEEEEEEC
T ss_pred             EEEEEEEHHHH----HHHHHhhccCCCccE----EEEEEEEEe
Confidence            99888764333    445556543 44554    566666654