Citrus Sinensis ID: 027732

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFLSFG
cccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccc
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcc
msptdssreENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQkeesrgnedHVSVIKEYRSKIENELSKICDGILSLLEshlipsassaeSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIAlaelapthpirlgLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFLSFG
msptdssreenvYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAyknvigarrasWRIISSieqkeesrgnedhvSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFLSFG
MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAAllflsfflsfG
***********************YEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS**************SVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAER**AAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFLS**
******S****VYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRII****************SVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFL***
***********VYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIE***********VSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFLSFG
********EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFLSFG
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSPTDSSREENVYxxxxxxxxxxxxxxxxxxxxxAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFLSFG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query219 2.2.26 [Sep-21-2011]
P93259264 14-3-3-like protein OS=Me N/A no 0.917 0.761 0.935 1e-107
O49997272 14-3-3-like protein E OS= N/A no 0.908 0.731 0.949 1e-107
Q9SP07259 14-3-3-like protein OS=Li N/A no 0.926 0.783 0.911 1e-107
P42652260 14-3-3 protein 4 OS=Solan N/A no 0.908 0.765 0.939 1e-107
Q96300265 14-3-3-like protein GF14 yes no 0.904 0.747 0.919 1e-105
Q41418259 14-3-3-like protein OS=So N/A no 0.894 0.756 0.954 1e-104
P42644255 14-3-3-like protein GF14 no no 0.904 0.776 0.914 1e-104
Q6ZKC0256 14-3-3-like protein GF14- yes no 0.899 0.769 0.903 1e-104
Q06967260 14-3-3-like protein GF14- no no 0.926 0.780 0.891 1e-103
Q6EUP4262 14-3-3-like protein GF14- no no 0.917 0.767 0.880 1e-102
>sp|P93259|1433_MESCR 14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1 Back     alignment and function desciption
 Score =  387 bits (995), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/201 (93%), Positives = 194/201 (96%)

Query: 4   TDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARR 63
           ++SSREENVYMAKLAEQAERYEEMVEFMEKVAK  D EEL+VEERNLLSVAYKNVIGARR
Sbjct: 3   SESSREENVYMAKLAEQAERYEEMVEFMEKVAKMTDTEELSVEERNLLSVAYKNVIGARR 62

Query: 64  ASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAES 123
           ASWRIISSIEQKEESRGNEDHVS IKEYR KIE ELSKICDGIL+LLESHLIPSAS+AES
Sbjct: 63  ASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAES 122

Query: 124 KVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNF 183
           KVFYLKMKGDYHRYLAEFKTGAERKEAAE+TLLAYKSAQDIALAELAPTHPIRLGLALNF
Sbjct: 123 KVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNF 182

Query: 184 SVFYYEILNSPDRACNLAKQV 204
           SVFYYEILNSPDRACNLAKQ 
Sbjct: 183 SVFYYEILNSPDRACNLAKQA 203
Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.
Mesembryanthemum crystallinum (taxid: 3544)
>sp|O49997|1433E_TOBAC 14-3-3-like protein E OS=Nicotiana tabacum PE=1 SV=1 Back     alignment and function description
>sp|Q9SP07|1433_LILLO 14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1 Back     alignment and function description
>sp|P42652|14334_SOLLC 14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1 Back     alignment and function description
>sp|Q96300|14337_ARATH 14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1 Back     alignment and function description
>sp|Q41418|14331_SOLTU 14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|P42644|14333_ARATH 14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2 Back     alignment and function description
>sp|Q6ZKC0|14333_ORYSJ 14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1 Back     alignment and function description
>sp|Q06967|14336_ORYSJ 14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2 Back     alignment and function description
>sp|Q6EUP4|14335_ORYSJ 14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query219
55375985262 14-3-3 family protein [Malus x domestica 0.926 0.774 0.975 1e-111
449438841263 PREDICTED: 14-3-3-like protein-like [Cuc 0.926 0.771 0.975 1e-111
310007371261 14-3-3 protein [Litchi chinensis] 0.926 0.777 0.970 1e-110
218202932261 14-3-3 protein [Dimocarpus longan] 0.926 0.777 0.970 1e-110
291162643261 14-3-3 family protein [Dimocarpus longan 0.926 0.777 0.965 1e-110
326694865264 14-3-3 protein 2 [Hevea brasiliensis] 0.926 0.768 0.960 1e-110
67107029264 14-3-3 protein [Manihot esculenta] gi|29 0.926 0.768 0.965 1e-109
164652942262 14-3-3e protein [Gossypium hirsutum] 0.926 0.774 0.965 1e-109
334192417261 14-3-3 protein [Pyrus pyrifolia] 0.926 0.777 0.960 1e-109
302122828262 14-3-3g protein [Gossypium hirsutum] 0.926 0.774 0.960 1e-109
>gi|55375985|gb|AAV50005.1| 14-3-3 family protein [Malus x domestica] Back     alignment and taxonomy information
 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/203 (97%), Positives = 201/203 (99%)

Query: 1   MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIG 60
           MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIG
Sbjct: 1   MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIG 60

Query: 61  ARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASS 120
           ARRASWRIISSIEQKEESRGNEDHV++IKEYRSKIE ELSKICDGIL+LLESHLIPSASS
Sbjct: 61  ARRASWRIISSIEQKEESRGNEDHVAIIKEYRSKIETELSKICDGILNLLESHLIPSASS 120

Query: 121 AESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLA 180
           AESKVFYLKMKGDYHRYLAEFKTG ERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLA
Sbjct: 121 AESKVFYLKMKGDYHRYLAEFKTGGERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLA 180

Query: 181 LNFSVFYYEILNSPDRACNLAKQ 203
           LNFSVFYYEILNSPDRACNLAKQ
Sbjct: 181 LNFSVFYYEILNSPDRACNLAKQ 203

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449438841|ref|XP_004137196.1| PREDICTED: 14-3-3-like protein-like [Cucumis sativus] gi|449483254|ref|XP_004156536.1| PREDICTED: 14-3-3-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|310007371|gb|ADP00759.1| 14-3-3 protein [Litchi chinensis] Back     alignment and taxonomy information
>gi|218202932|gb|ACK76233.1| 14-3-3 protein [Dimocarpus longan] Back     alignment and taxonomy information
>gi|291162643|gb|ADD79961.1| 14-3-3 family protein [Dimocarpus longan] gi|291162645|gb|ADD79962.1| 14-3-3 family protein [Dimocarpus longan] Back     alignment and taxonomy information
>gi|326694865|gb|AEA03663.1| 14-3-3 protein 2 [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|67107029|gb|AAY67798.1| 14-3-3 protein [Manihot esculenta] gi|291293223|gb|ADD92155.1| 14-3-3 protein [Manihot esculenta] Back     alignment and taxonomy information
>gi|164652942|gb|ABY65004.1| 14-3-3e protein [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|334192417|gb|AEG67284.1| 14-3-3 protein [Pyrus pyrifolia] Back     alignment and taxonomy information
>gi|302122828|gb|ADK93080.1| 14-3-3g protein [Gossypium hirsutum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query219
TAIR|locus:2076904265 GRF7 "AT3G02520" [Arabidopsis 0.904 0.747 0.919 2.1e-93
TAIR|locus:2146147268 GRF5 "AT5G16050" [Arabidopsis 0.913 0.746 0.91 9e-93
TAIR|locus:2177386255 GRF3 "general regulatory facto 0.904 0.776 0.914 1.9e-92
UNIPROTKB|Q06967260 GF14F "14-3-3-like protein GF1 0.926 0.780 0.891 6.3e-92
TAIR|locus:2032060259 GRF2 "general regulatory facto 0.904 0.764 0.873 7.7e-87
TAIR|locus:2122323318 GRF1 "AT4G09000" [Arabidopsis 0.904 0.622 0.853 4.3e-86
DICTYBASE|DDB_G0269138252 fttB "14-3-3-like protein" [Di 0.885 0.769 0.801 2.7e-77
ZFIN|ZDB-GENE-030131-779255 ywhae1 "tyrosine 3-monooxygena 0.881 0.756 0.758 2.5e-74
FB|FBgn0020238262 14-3-3epsilon "14-3-3epsilon" 0.890 0.744 0.746 8.4e-74
CGD|CAL0001346264 BMH1 [Candida albicans (taxid: 0.894 0.742 0.742 1.4e-73
TAIR|locus:2076904 GRF7 "AT3G02520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
 Identities = 182/198 (91%), Positives = 194/198 (97%)

Query:     6 SSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 65
             SSREENVY+AKLAEQAERYEEMVEFMEKVAKTVD +ELTVEERNLLSVAYKNVIGARRAS
Sbjct:     3 SSREENVYLAKLAEQAERYEEMVEFMEKVAKTVDTDELTVEERNLLSVAYKNVIGARRAS 62

Query:    66 WRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKV 125
             WRIISSIEQKEESRGN+DHVS+IK+YR KIE ELSKICDGIL+LL+SHL+P+AS AESKV
Sbjct:    63 WRIISSIEQKEESRGNDDHVSIIKDYRGKIETELSKICDGILNLLDSHLVPTASLAESKV 122

Query:   126 FYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSV 185
             FYLKMKGDYHRYLAEFKTGAERKEAAESTL+AYKSAQDIALA+LAPTHPIRLGLALNFSV
Sbjct:   123 FYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSV 182

Query:   186 FYYEILNSPDRACNLAKQ 203
             FYYEILNSPDRAC+LAKQ
Sbjct:   183 FYYEILNSPDRACSLAKQ 200
GO:0005635 "nuclear envelope" evidence=IDA
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0019904 "protein domain specific binding" evidence=IEA
GO:0045309 "protein phosphorylated amino acid binding" evidence=TAS
GO:0009507 "chloroplast" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006486 "protein glycosylation" evidence=RCA
GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0043090 "amino acid import" evidence=RCA
GO:0009570 "chloroplast stroma" evidence=IDA
TAIR|locus:2146147 GRF5 "AT5G16050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2177386 GRF3 "general regulatory factor 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q06967 GF14F "14-3-3-like protein GF14-F" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2032060 GRF2 "general regulatory factor 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122323 GRF1 "AT4G09000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269138 fttB "14-3-3-like protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-779 ywhae1 "tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0020238 14-3-3epsilon "14-3-3epsilon" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
CGD|CAL0001346 BMH1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O427661433_CANALNo assigned EC number0.74240.89490.7424N/Ano
Q964501433A_SOYBNNo assigned EC number0.9350.91320.7782nono
P426531433A_VICFANo assigned EC number0.83740.92690.7777N/Ano
P4265214334_SOLLCNo assigned EC number0.93960.90860.7653N/Ano
P921771433E_DROMENo assigned EC number0.74610.89040.7442yesno
O653521433_HELANNo assigned EC number0.83330.92690.7837N/Ano
Q4141814331_SOLTUNo assigned EC number0.95450.89490.7567N/Ano
Q434701433B_HORVUNo assigned EC number0.85570.91780.7671N/Ano
Q4364314332_SOLTUNo assigned EC number0.83830.89950.7755N/Ano
P4910614331_MAIZENo assigned EC number0.86200.92690.7777N/Ano
Q5ZMT01433E_CHICKNo assigned EC number0.75120.89040.7647yesno
P529081433_CHLRENo assigned EC number0.81210.89950.7606N/Ano
P622621433E_SHEEPNo assigned EC number0.75120.89040.7647N/Ano
P622601433E_RATNo assigned EC number0.75120.89040.7647yesno
P9321114336_SOLLCNo assigned EC number0.870.90860.7713N/Ano
P9321014335_SOLLCNo assigned EC number0.83830.90410.7764N/Ano
P932591433_MESCRNo assigned EC number0.93530.91780.7613N/Ano
P4264414333_ARATHNo assigned EC number0.91410.90410.7764nono
P4264514335_ARATHNo assigned EC number0.910.91320.7462nono
Q9630014337_ARATHNo assigned EC number0.91910.90410.7471yesno
P546321433_DICDINo assigned EC number0.80100.88580.7698yesno
P933431433C_TOBACNo assigned EC number0.86690.92690.7807N/Ano
P933421433A_TOBACNo assigned EC number0.84840.89950.7725N/Ano
P9378414335_SOLTUNo assigned EC number0.870.90860.7713N/Ano
Q9SP071433_LILLONo assigned EC number0.91130.92690.7837N/Ano
P4834814338_ARATHNo assigned EC number0.76110.91320.8064nono
P462661433_PEANo assigned EC number0.86760.93150.7846N/Ano
P622591433E_MOUSENo assigned EC number0.75120.89040.7647yesno
Q0152614332_MAIZENo assigned EC number0.86690.92690.7777N/Ano
O499981433F_TOBACNo assigned EC number0.85420.90410.7674N/Ano
Q6ZKC014333_ORYSJNo assigned EC number0.90350.89950.7695yesno
O499961433D_TOBACNo assigned EC number0.72130.91780.8072N/Ano
O499971433E_TOBACNo assigned EC number0.94970.90860.7316N/Ano
O499951433B_TOBACNo assigned EC number0.88380.89950.7725N/Ano
P9320814332_SOLLCNo assigned EC number0.88320.89950.7755N/Ano
P9320914333_SOLLCNo assigned EC number0.86200.91780.7730N/Ano
P622581433E_HUMANNo assigned EC number0.75120.89040.7647yesno
P9320614331_SOLLCNo assigned EC number0.72630.91780.8072N/Ano
P9320714310_SOLLCNo assigned EC number0.72770.91780.7976N/Ano
P293051433A_HORVUNo assigned EC number0.87680.92690.7748N/Ano
P293071433_OENEHNo assigned EC number0.85290.93150.7846N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.01230072
SubName- Full=Putative uncharacterized protein; (262 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query219
smart00101244 smart00101, 14_3_3, 14-3-3 homologues 1e-133
cd10026237 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain 1e-126
pfam00244236 pfam00244, 14-3-3, 14-3-3 protein 1e-124
cd11309231 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domai 1e-106
cd08774225 cd08774, 14-3-3, 14-3-3 domain 1e-106
cd10020230 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isofor 1e-106
COG5040268 COG5040, BMH1, 14-3-3 family protein [Signal trans 1e-103
cd11310230 cd11310, 14-3-3_1, 14-3-3 protein domain 3e-79
cd10022229 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta is 3e-75
cd10023234 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in 4e-74
cd10019242 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 9e-74
cd10024246 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 2e-67
cd10025239 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14- 7e-65
>gnl|CDD|128412 smart00101, 14_3_3, 14-3-3 homologues Back     alignment and domain information 
 Score =  373 bits (960), Expect = e-133
 Identities = 186/196 (94%), Positives = 190/196 (96%)

Query: 8   REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWR 67
           REENVYMAKLAEQAERYEEMVEFMEKVAKTVD EELTVEERNLLSVAYKNVIGARRASWR
Sbjct: 1   REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWR 60

Query: 68  IISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFY 127
           IISSIEQKEESRGNEDHV+ IKEYR KIE ELSKICDGIL LLESHLIPSAS+AESKVFY
Sbjct: 61  IISSIEQKEESRGNEDHVASIKEYRGKIETELSKICDGILKLLESHLIPSASAAESKVFY 120

Query: 128 LKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFY 187
           LKMKGDYHRYLAEFKTGAERKEAAE+TL+AYKSAQDIALAEL PTHPIRLGLALNFSVFY
Sbjct: 121 LKMKGDYHRYLAEFKTGAERKEAAENTLVAYKSAQDIALAELPPTHPIRLGLALNFSVFY 180

Query: 188 YEILNSPDRACNLAKQ 203
           YEILNSPDRACNLAKQ
Sbjct: 181 YEILNSPDRACNLAKQ 196

14-3-3 homologues mediates signal transduction by binding to phosphoserine-containing proteins. They are involved in growth factor signalling and also interact with MEK kinases. Length = 244
>gnl|CDD|206762 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|215815 pfam00244, 14-3-3, 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206763 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206755 cd08774, 14-3-3, 14-3-3 domain Back     alignment and domain information
>gnl|CDD|206757 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|227373 COG5040, BMH1, 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|206764 cd11310, 14-3-3_1, 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206758 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta isoforms of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206759 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in mice, tau in human), an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206756 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206760 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206761 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14-3-3 protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 219
COG5040268 BMH1 14-3-3 family protein [Signal transduction me 100.0
smart00101244 14_3_3 14-3-3 homologues. 14-3-3 homologues mediat 100.0
PF00244236 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14 100.0
KOG0841247 consensus Multifunctional chaperone (14-3-3 family 100.0
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 96.57
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 95.8
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 93.16
PF1286294 Apc5: Anaphase-promoting complex subunit 5 92.39
PF1341469 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A 85.93
PF04781111 DUF627: Protein of unknown function (DUF627); Inte 85.32
PF1337442 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT 82.67
PF1317433 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_ 82.45
PF0771934 TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 81.65
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 80.62
>COG5040 BMH1 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=4.7e-84  Score=536.02  Aligned_cols=211  Identities=72%  Similarity=1.047  Sum_probs=207.5

Q ss_pred             CCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCch
Q 027732            4 TDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED   83 (219)
Q Consensus         4 m~~~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~   83 (219)
                      |++.|++-+|+|||++|||||+||++-||.++..+  .+|+.+|||||||||||+||.||+|||++++++|+++++|++.
T Consensus         1 Ms~~rE~svylAkLaeqAERYe~MvenMk~vas~~--~eLsVeeRNLlSVAYKNvigaRRaSWRivsSieQKeEsk~~~~   78 (268)
T COG5040           1 MSTSREDSVYLAKLAEQAERYEEMVENMKLVASSG--QELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTH   78 (268)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhcCCChh
Confidence            57779999999999999999999999999999988  9999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHH
Q 027732           84 HVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQD  163 (219)
Q Consensus        84 ~~~~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~  163 (219)
                      ++.+|++||++|++||..||+||+++|+++|||.+++.|++|||+|||||||||+|||..|+.+.++.+.+.++|+.|.+
T Consensus        79 qv~lI~eyrkkiE~EL~~icddiL~vl~~hlipaa~~~EskvFyyKMKGDYyRYlAEf~~G~~~~e~a~~slE~YK~Ase  158 (268)
T COG5040          79 QVELIKEYRKKIETELTKICDDILSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFSVGEAREEAADSSLEAYKAASE  158 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeecchHHHHHHHhccchHhHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhhhhh
Q 027732          164 IALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFL  216 (219)
Q Consensus       164 ~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~ld~~~  216 (219)
                      +|...||||||||||||||||||||||+|+|++||.|||+|||+||++||+|-
T Consensus       159 iA~teLpPT~PirLGLALNfSVFyYEIlnspdkAC~lAKqaFDeAI~ELDtLS  211 (268)
T COG5040         159 IATTELPPTHPIRLGLALNFSVFYYEILNSPDKACHLAKQAFDEAISELDTLS  211 (268)
T ss_pred             HhhccCCCCCchhhhheecceeeeeecccCcHHHHHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999984

>smart00101 14_3_3 14-3-3 homologues Back     alignment and domain information
>PF00244 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14-3-3 proteins are a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimeric within all eukaryotic cells [, ] Back     alignment and domain information
>KOG0841 consensus Multifunctional chaperone (14-3-3 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PF12862 Apc5: Anaphase-promoting complex subunit 5 Back     alignment and domain information
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A Back     alignment and domain information
>PF04781 DUF627: Protein of unknown function (DUF627); InterPro: IPR006866 This domain represents the N-terminal region of several plant proteins of unknown function Back     alignment and domain information
>PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A Back     alignment and domain information
>PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A Back     alignment and domain information
>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query219
4dx0_A243 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A 1e-108
3axy_C240 Structure Of Florigen Activation Complex Consisting 1e-104
2o98_A242 Structure Of The 14-3-3 H+-Atpase Plant Complex Len 1e-101
3m50_A240 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E 1e-101
1o9c_A260 Structural View Of A Fungal Toxin Acting On A 14-3- 1e-101
3ubw_A261 Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphope 2e-82
2br9_A234 14-3-3 Protein Epsilon (Human) Complexed To Peptide 5e-82
3ual_A232 Crystal Structure Of 14-3-3 Epsilon With Mlf1 Pepti 5e-82
2npm_A260 Crystal Structure Of Cryptosporidium Parvum 14-3-3 1e-70
2c1j_A258 Molecular Basis For The Recognition Of Phosphorylat 5e-64
1a38_A245 14-3-3 Protein Zeta Bound To R18 Peptide Length = 2 2e-63
2v7d_A247 14-3-3 Protein Zeta In Complex With Thr758 Phosphor 2e-63
4fj3_A235 14-3-3 Isoform Zeta In Complex With A Diphoyphoryla 2e-63
3rdh_A248 X-Ray Induced Covalent Inhibition Of 14-3-3 Length 2e-63
2o02_A230 Phosphorylation Independent Interactions Between 14 2e-63
3smo_A235 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 6e-63
3p1r_A236 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 6e-63
3p1p_A236 Crystal Structure Of Human 14-3-3 Sigma C38nN166H I 4e-62
3lw1_A253 Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptid 1e-61
1ywt_A248 Crystal Structure Of The Human Sigma Isoform Of 14- 1e-61
4hqw_A236 Molecular Tweezers Modulate 14-3-3 Protein-protein 2e-61
3o8i_A239 Structure Of 14-3-3 Isoform Sigma In Complex With A 2e-61
3t0l_A235 Small-Molecule Inhibitors Of 14-3-3 Protein-Protein 2e-61
3iqj_A236 Crystal Structure Of Human 14-3-3 Sigma In Complex 2e-61
3p1n_A235 Crystal Structure Of Human 14-3-3 Sigma In Complex 2e-61
4dat_A234 Structure Of 14-3-3 Sigma In Complex With Padi6 14- 2e-61
2bq0_A245 14-3-3 Protein Beta (Human) Length = 245 4e-61
3u9x_A235 Covalent Attachment Of Pyridoxal-Phosphate Derivati 9e-61
3uzd_A248 Crystal Structure Of 14-3-3 Gamma Length = 248 2e-60
2b05_A246 Crystal Structure Of 14-3-3 Gamma In Complex With A 2e-60
4gnt_A245 Complex Of Chrebp And 14-3-3beta Length = 245 3e-60
2btp_A256 14-3-3 Protein Theta (Human) Complexed To Peptide L 5e-60
2c63_A247 14-3-3 Protein Eta (Human) Complexed To Peptide Len 1e-58
4dnk_A247 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 4e-58
4e2e_A248 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 3e-57
3efz_A268 Crystal Structure Of A 14-3-3 Protein From Cryptosp 9e-11
>pdb|4DX0|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A PYRAZOLE Derivative Length = 243 Back     alignment and structure 
Iteration: 1

 Score =  386 bits (992), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/202 (94%), Positives = 195/202 (96%)
Query: 2   SPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGA 61
           S  +S+REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGA
Sbjct: 5   SMAESTREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGA 64
Query: 62  RRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSA 121
           RRASWRIISSIEQKEESRGNEDHVS IKEYR KIE ELSKICDGIL+LLESHLIP AS+A
Sbjct: 65  RRASWRIISSIEQKEESRGNEDHVSSIKEYRGKIEAELSKICDGILNLLESHLIPVASTA 124
Query: 122 ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLAL 181
           ESKVFYLKMKGDYHRYLAEFKTGAERKEAAE+TLLAYKSAQDIALAELAPTHPIRLGLAL
Sbjct: 125 ESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLAL 184
Query: 182 NFSVFYYEILNSPDRACNLAKQ 203
           NFSVFYYEILNS DRACNLAKQ
Sbjct: 185 NFSVFYYEILNSSDRACNLAKQ 206
>pdb|3AXY|C Chain C, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 240 Back     alignment and structure
>pdb|2O98|A Chain A, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 242 Back     alignment and structure
>pdb|3M50|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 240 Back     alignment and structure
>pdb|1O9C|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3 Regulatory Complex Length = 260 Back     alignment and structure
>pdb|3UBW|A Chain A, Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphopeptide And A Small Fragment Hit From A Fbdd Screen Length = 261 Back     alignment and structure
>pdb|2BR9|A Chain A, 14-3-3 Protein Epsilon (Human) Complexed To Peptide Length = 234 Back     alignment and structure
>pdb|3UAL|A Chain A, Crystal Structure Of 14-3-3 Epsilon With Mlf1 Peptide Length = 232 Back     alignment and structure
>pdb|2NPM|A Chain A, Crystal Structure Of Cryptosporidium Parvum 14-3-3 Protein In Complex With Peptide Length = 260 Back     alignment and structure
>pdb|2C1J|A Chain A, Molecular Basis For The Recognition Of Phosphorylated And Phosphoacetylated Histone H3 By 14-3-3 Length = 258 Back     alignment and structure
>pdb|1A38|A Chain A, 14-3-3 Protein Zeta Bound To R18 Peptide Length = 245 Back     alignment and structure
>pdb|2V7D|A Chain A, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated Integrin Beta2 Peptide Length = 247 Back     alignment and structure
>pdb|4FJ3|A Chain A, 14-3-3 Isoform Zeta In Complex With A Diphoyphorylated C-Raf Peptide Length = 235 Back     alignment and structure
>pdb|3RDH|A Chain A, X-Ray Induced Covalent Inhibition Of 14-3-3 Length = 248 Back     alignment and structure
>pdb|2O02|A Chain A, Phosphorylation Independent Interactions Between 14-3-3 And Exoenzyme S: From Structure To Pathogenesis Length = 230 Back     alignment and structure
>pdb|3SMO|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin J Aglycone Length = 235 Back     alignment and structure
>pdb|3P1R|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|3P1P|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|3LW1|A Chain A, Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptide Length = 253 Back     alignment and structure
>pdb|1YWT|A Chain A, Crystal Structure Of The Human Sigma Isoform Of 14-3-3 In Complex With A Mode-1 Phosphopeptide Length = 248 Back     alignment and structure
>pdb|4HQW|A Chain A, Molecular Tweezers Modulate 14-3-3 Protein-protein Interactions Length = 236 Back     alignment and structure
>pdb|3O8I|A Chain A, Structure Of 14-3-3 Isoform Sigma In Complex With A C-Raf1 Peptide And A Stabilizing Small Molecule Fragment Length = 239 Back     alignment and structure
>pdb|3T0L|A Chain A, Small-Molecule Inhibitors Of 14-3-3 Protein-Protein Interactions From Virtual Screening Length = 235 Back     alignment and structure
>pdb|3IQJ|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Raf1 Peptide (10mer) Length = 236 Back     alignment and structure
>pdb|3P1N|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Task-3 Peptide Length = 235 Back     alignment and structure
>pdb|4DAT|A Chain A, Structure Of 14-3-3 Sigma In Complex With Padi6 14-3-3 Binding Motif Ii Length = 234 Back     alignment and structure
>pdb|2BQ0|A Chain A, 14-3-3 Protein Beta (Human) Length = 245 Back     alignment and structure
>pdb|3U9X|A Chain A, Covalent Attachment Of Pyridoxal-Phosphate Derivatives To 14-3-3 Proteins Length = 235 Back     alignment and structure
>pdb|3UZD|A Chain A, Crystal Structure Of 14-3-3 Gamma Length = 248 Back     alignment and structure
>pdb|2B05|A Chain A, Crystal Structure Of 14-3-3 Gamma In Complex With A Phosphoserine Peptide Length = 246 Back     alignment and structure
>pdb|4GNT|A Chain A, Complex Of Chrebp And 14-3-3beta Length = 245 Back     alignment and structure
>pdb|2BTP|A Chain A, 14-3-3 Protein Theta (Human) Complexed To Peptide Length = 256 Back     alignment and structure
>pdb|2C63|A Chain A, 14-3-3 Protein Eta (Human) Complexed To Peptide Length = 247 Back     alignment and structure
>pdb|4DNK|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Beta Polypeptide (Ywhab) From Homo Sapiens At 2.20 A Resolution. Length = 247 Back     alignment and structure
>pdb|4E2E|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Gamma Polypeptide (Ywhag) From Homo Sapiens At 2.25 A Resolution Length = 248 Back     alignment and structure
>pdb|3EFZ|A Chain A, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium Parvum (Cgd1_2980) Length = 268 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query219
2npm_A260 14-3-3 domain containing protein; cell regulator p 6e-84
2o8p_A227 14-3-3 domain containing protein; signaling protei 1e-81
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 2e-81
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 2e-81
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 1e-80
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 4e-80
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 7e-79
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 5e-77
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Length = 260 Back     alignment and structure
 Score =  249 bits (635), Expect = 6e-84
 Identities = 128/210 (60%), Positives = 163/210 (77%), Gaps = 2/210 (0%)

Query: 1   MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDV-EELTVEERNLLSVAYKNVI 59
           MS + ++RE NVYMAKLAEQAERY+EM ++M+ V +     EELTVEERNLLSVAYKN +
Sbjct: 21  MSDSVNARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAV 80

Query: 60  GARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSAS 119
           G+RR+SWRIISS+EQKE SR  ED   +  +YRSK+E EL+ IC+ IL++L+ HLIP+A+
Sbjct: 81  GSRRSSWRIISSVEQKEHSRNAEDASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTAT 140

Query: 120 SAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGL 179
           S +SKVFY KMKGDYHRY++EF TG  ++ +AE  L AYK A  +A  +L PTHPIRLGL
Sbjct: 141 SPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVA-KDLEPTHPIRLGL 199

Query: 180 ALNFSVFYYEILNSPDRACNLAKQVRVAAL 209
           ALNFSVF+YEILN P  A ++AK+    A+
Sbjct: 200 ALNFSVFHYEILNEPRAAIDMAKEAFEMAI 229
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Length = 227 Back     alignment and structure
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Length = 248 Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Length = 260 Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Length = 234 Back     alignment and structure
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3p1s_A* 3p1r_A* 3p1q_A* 3p1p_A* 1ywt_A* 1yz5_A 2v7d_A* 2o02_A 1qja_A* 1a37_A 1a38_A 1a4o_A* 1ib1_A* ... Length = 236 Back     alignment and structure
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Length = 261 Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Length = 268 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query219
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 100.0
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 100.0
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 100.0
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 100.0
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 100.0
2npm_A260 14-3-3 domain containing protein; cell regulator p 100.0
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 100.0
2o8p_A227 14-3-3 domain containing protein; signaling protei 100.0
3edt_B283 KLC 2, kinesin light chain 2; superhelical, struct 96.37
3nf1_A311 KLC 1, kinesin light chain 1; TPR, structural geno 95.65
3vtx_A184 MAMA; tetratricopeptide repeats (TPR) containing p 95.22
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 94.89
3u3w_A293 Transcriptional activator PLCR protein; ternary co 94.76
4a1s_A 411 PINS, partner of inscuteable; cell cycle, LGN, mit 94.59
2qfc_A293 PLCR protein; TPR, HTH, transcription regulation; 94.59
3qww_A433 SET and MYND domain-containing protein 2; methyltr 94.29
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 94.15
3edt_B 283 KLC 2, kinesin light chain 2; superhelical, struct 93.86
3sf4_A 406 G-protein-signaling modulator 2; tetratricopeptide 93.76
3ro2_A 338 PINS homolog, G-protein-signaling modulator 2; TPR 93.64
3hym_B330 Cell division cycle protein 16 homolog; APC, anaph 93.0
3ro2_A338 PINS homolog, G-protein-signaling modulator 2; TPR 92.98
3u4t_A272 TPR repeat-containing protein; structural genomics 92.96
1fch_A368 Peroxisomal targeting signal 1 receptor; protein-p 92.91
3q15_A 378 PSP28, response regulator aspartate phosphatase H; 92.44
3ulq_A 383 Response regulator aspartate phosphatase F; tetrat 92.41
3qww_A433 SET and MYND domain-containing protein 2; methyltr 92.3
4b4t_Q 434 26S proteasome regulatory subunit RPN6; hydrolase, 91.68
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 91.52
4i17_A228 Hypothetical protein; TPR repeats protein, structu 91.37
3qky_A261 Outer membrane assembly lipoprotein YFIO; membrane 90.8
2gw1_A 514 Mitochondrial precursor proteins import receptor; 90.31
3ulq_A383 Response regulator aspartate phosphatase F; tetrat 90.11
2xpi_A597 Anaphase-promoting complex subunit CUT9; cell cycl 89.75
4g1t_A472 Interferon-induced protein with tetratricopeptide 89.75
3ieg_A359 DNAJ homolog subfamily C member 3; TPR motif, chap 89.75
4eqf_A365 PEX5-related protein; accessory protein, tetratric 89.63
4abn_A 474 Tetratricopeptide repeat protein 5; P53 cofactor, 89.54
1fch_A368 Peroxisomal targeting signal 1 receptor; protein-p 89.36
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 89.26
4gcn_A127 Protein STI-1; structural genomics, PSI-biology, m 89.25
3ro3_A164 PINS homolog, G-protein-signaling modulator 2; asy 88.89
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 88.87
2q7f_A243 YRRB protein; TPR, protein binding; 2.49A {Bacillu 88.73
3ro3_A164 PINS homolog, G-protein-signaling modulator 2; asy 88.44
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 88.44
2q7f_A243 YRRB protein; TPR, protein binding; 2.49A {Bacillu 88.23
3sf4_A 406 G-protein-signaling modulator 2; tetratricopeptide 88.18
2pl2_A217 Hypothetical conserved protein TTC0263; TPR, prote 87.95
4gyw_A 723 UDP-N-acetylglucosamine--peptide N- acetylglucosam 87.78
3ieg_A359 DNAJ homolog subfamily C member 3; TPR motif, chap 87.63
3fp2_A537 TPR repeat-containing protein YHR117W; TOM71, mito 87.16
3hym_B330 Cell division cycle protein 16 homolog; APC, anaph 87.15
3cv0_A327 Peroxisome targeting signal 1 receptor PEX5; TPR m 86.6
2gw1_A514 Mitochondrial precursor proteins import receptor; 86.24
2xpi_A597 Anaphase-promoting complex subunit CUT9; cell cycl 85.96
4eqf_A365 PEX5-related protein; accessory protein, tetratric 85.31
3uq3_A258 Heat shock protein STI1; HSP90, peptide binding, c 85.16
2ho1_A252 Type 4 fimbrial biogenesis protein PILF; type IV p 85.12
2pl2_A217 Hypothetical conserved protein TTC0263; TPR, prote 85.01
3rkv_A162 Putative peptidylprolyl isomerase; structural geno 84.98
2ifu_A307 Gamma-SNAP; membrane fusion, snare complex disasse 84.81
4a1s_A 411 PINS, partner of inscuteable; cell cycle, LGN, mit 84.17
2ifu_A 307 Gamma-SNAP; membrane fusion, snare complex disasse 83.19
4gco_A126 Protein STI-1; structural genomics, PSI-biology, m 83.07
3cv0_A327 Peroxisome targeting signal 1 receptor PEX5; TPR m 81.72
3lf9_A121 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immu 81.45
4g1t_A 472 Interferon-induced protein with tetratricopeptide 81.16
4gcn_A127 Protein STI-1; structural genomics, PSI-biology, m 80.96
1xnf_A275 Lipoprotein NLPI; TPR, tetratricopeptide, structur 80.93
3u3w_A293 Transcriptional activator PLCR protein; ternary co 80.76
1qqe_A292 Vesicular transport protein SEC17; helix-turn-heli 80.33
1elr_A131 TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp 80.31
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ... Back     alignment and structure
Probab=100.00  E-value=2.8e-88  Score=581.14  Aligned_cols=209  Identities=56%  Similarity=0.835  Sum_probs=204.8

Q ss_pred             CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhH
Q 027732            6 SSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV   85 (219)
Q Consensus         6 ~~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~   85 (219)
                      .+|+++||+|||||||||||||+++||++++.+  ++||.||||||||||||+||++|+|||+|+++||+++.+|++.++
T Consensus         6 ~~re~~v~~AklaeqaeRyddM~~~mk~v~~~~--~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~   83 (236)
T 3iqu_A            6 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKG--EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKG   83 (236)
T ss_dssp             SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred             ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHH
Confidence            379999999999999999999999999999998  999999999999999999999999999999999999888888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 027732           86 SVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIA  165 (219)
Q Consensus        86 ~~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a  165 (219)
                      +.+++||++|++||..+|++|+++||++|||+++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++|
T Consensus        84 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA  163 (236)
T 3iqu_A           84 PEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDIS  163 (236)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhhhhh
Q 027732          166 LAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFL  216 (219)
Q Consensus       166 ~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~ld~~~  216 (219)
                      +++|||||||||||+||||||||||+|+|++||++||+|||+||++||+|-
T Consensus       164 ~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~  214 (236)
T 3iqu_A          164 KKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLS  214 (236)
T ss_dssp             HHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSC
T ss_pred             HhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence            989999999999999999999999999999999999999999999999873
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Back     alignment and structure
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Back     alignment and structure
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Back     alignment and structure
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Back     alignment and structure
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A Back     alignment and structure
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Back     alignment and structure
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Back     alignment and structure
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Back     alignment and structure
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Back     alignment and structure
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Back     alignment and structure
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Back     alignment and structure
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Back     alignment and structure
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} Back     alignment and structure
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} Back     alignment and structure
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Back     alignment and structure
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Back     alignment and structure
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Back     alignment and structure
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} Back     alignment and structure
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 Back     alignment and structure
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 Back     alignment and structure
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Back     alignment and structure
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Back     alignment and structure
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* Back     alignment and structure
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Back     alignment and structure
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Back     alignment and structure
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Back     alignment and structure
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A Back     alignment and structure
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Back     alignment and structure
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Back     alignment and structure
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A Back     alignment and structure
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Back     alignment and structure
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Back     alignment and structure
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} Back     alignment and structure
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Back     alignment and structure
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} Back     alignment and structure
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Back     alignment and structure
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A Back     alignment and structure
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene} Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Back     alignment and structure
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 Back     alignment and structure
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A Back     alignment and structure
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 Back     alignment and structure
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 219
d1o9da_236 a.118.7.1 (A:) 14-3-3-like protein C {Common tobac 1e-103
d2o02a1230 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) 4e-94
d2o8pa1220 a.118.7.1 (A:8-227) 14-3-3 domain containing prote 4e-87
d3efza1223 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cry 4e-78
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 236 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score =  296 bits (759), Expect = e-103
 Identities = 175/198 (88%), Positives = 188/198 (94%)

Query: 6   SSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 65
           ++REENVYMAKLAEQAERYEEMVEFMEKV+ ++  EELTVEERNLLSVAYKNVIGARRAS
Sbjct: 2   TAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRAS 61

Query: 66  WRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKV 125
           WRIISSIEQKEESRGNE+HV+ I+EYRSKIENELSKICDGIL LL++ LIPSA+S +SKV
Sbjct: 62  WRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKV 121

Query: 126 FYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSV 185
           FYLKMKGDYHRYLAEFKTGAERKEAAESTL AYK+AQDIA  ELAPTHPIRLGLALNFSV
Sbjct: 122 FYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSV 181

Query: 186 FYYEILNSPDRACNLAKQ 203
           FYYEILNSPDRACNLAKQ
Sbjct: 182 FYYEILNSPDRACNLAKQ 199
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Length = 230 Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Length = 220 Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Length = 223 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query219
d1o9da_236 14-3-3-like protein C {Common tobacco (Nicotiana t 100.0
d2o02a1230 zeta isoform {Cow (Bos taurus) [TaxId: 9913]} 100.0
d2o8pa1220 14-3-3 domain containing protein cgd7_2470 {Crypto 100.0
d3efza1223 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [ 100.0
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 92.43
d1tjca_95 Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human 88.64
d1kt1a1168 FKBP51, C-terminal domain {Monkey (Saimiri bolivie 86.51
d1elra_128 Hop {Human (Homo sapiens) [TaxId: 9606]} 85.75
d1w3ba_ 388 O-GlcNAc transferase p110 subunit, OGT {Human (Hom 85.43
d1p5qa1170 FKBP52 (FKBP4), C-terminal domain {Human (Homo sap 83.32
d2fbna1153 Putative 70 kda peptidylprolyl isomerase PFL2275c 82.54
d1a17a_159 Protein phosphatase 5 {Human (Homo sapiens) [TaxId 81.49
d1w3ba_388 O-GlcNAc transferase p110 subunit, OGT {Human (Hom 81.43
d1a17a_159 Protein phosphatase 5 {Human (Homo sapiens) [TaxId 80.3
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=3.5e-80  Score=530.91  Aligned_cols=210  Identities=84%  Similarity=1.196  Sum_probs=203.5

Q ss_pred             CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhH
Q 027732            6 SSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV   85 (219)
Q Consensus         6 ~~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~   85 (219)
                      .+|+++||+|||++|||||+||+.+||++++..++++||.|||||||+||||+||++|+|||+|++++++++.+|++.++
T Consensus         2 ~~Re~lv~~AklaeqaeRy~dm~~~mk~v~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e~k~~~~~~~~~~   81 (236)
T d1o9da_           2 TAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHV   81 (236)
T ss_dssp             CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred             CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHccCChHHH
Confidence            46999999999999999999999999999987222899999999999999999999999999999999999888888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 027732           86 SVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIA  165 (219)
Q Consensus        86 ~~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a  165 (219)
                      +.+++|+++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||.+|+++++++++|.++|++|+++|
T Consensus        82 ~~i~~yk~kie~EL~~~C~~ii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~e~~~~~~~a~~aY~~A~~~a  161 (236)
T d1o9da_          82 NSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIA  161 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHhhchHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhhhh
Q 027732          166 LAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFF  215 (219)
Q Consensus       166 ~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~ld~~  215 (219)
                      +++|+||||+||||+||||||||||+|++++||++|++|||+|++++|.|
T Consensus       162 ~~~l~pt~PirLgLaLN~SVF~yEi~~~~~~A~~lak~afd~ai~~~d~l  211 (236)
T d1o9da_         162 TTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTL  211 (236)
T ss_dssp             HHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HhcCCCCcHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            98999999999999999999999999999999999999999999999976
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure