Citrus Sinensis ID: 027765

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
MMAGIFRATNWGRLEIAGFPIYKRSLEIASSQNPIRHQSLKLVFKMAPAVQQNGSPEVKEPSPKIPKLHQNGVENDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV
ccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccEEcccccEEccccEEEEcccEEEEcccccEEEEEccccHHHccccccccccccccccccEEEEEEEcccccEEEccccEEEEEEEEEEccccEEEEcccccccccccccccccc
ccccEEccccccHHHEEHHHHHHccccHHHHHcHHHHHHHHHHHHcccHHHHcccccccccccccccccccccHHcccccEEEEEEccccccccEcccccccEEEEEccccEEEcccEEEEEEccEEEEccccEEEEEEccHHHHHHHcEEEEccEEcccEccccEEEEEEcccccEEEccccEEEEEEEEEEcccEEEEccccccccccccccccccc
mmagifratnwgrleiagfpiykrsleiassqnpirhqSLKLVFKMapavqqngspevkepspkipklhqngvendniGSLLRVKKlsekavlpkrgsplaagydlssaaetkvpargkalvptdlsiaipegtyariaprsglawkhsmdvgagvidadyrgpvGVILFNHSDVDFVVKVGDRIAQLIIEkivtpdvlevenldstvrgeggfgstgv
mmagifratnwgrleiAGFPIYKRSLEIASSQNPIRHQSLKLVFKMAPAVQQngspevkepspkipklhqngvendnIGSLLRVKKLSekavlpkrgsplaagydlssaaetkvpargkalvptdlsiaipegTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLiiekivtpdvlevenldstvrgeggfgstgv
MMAGIFRATNWGRLEIAGFPIYKRSLEIASSQNPIRHQSLKLVFKMAPAVQQNGSPEVKEPSPKIPKLHQNGVENDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV
***GIFRATNWGRLEIAGFPIYKRSLEIA**********LKLVF**************************************************************************KALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEV******************
*********NWGRLEIAGFPIYKRSLE******************************************************LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFG*T**
MMAGIFRATNWGRLEIAGFPIYKRSLEIASSQNPIRHQSLKLVFKMAPAV*************KIPKLHQNGVENDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV
***GIFRATNWGRLEIAGFPIYKRSLEIASSQNPIRHQSLKLVFKMAPAVQQNGSPEVKEPSPKIPKL*QNGV**DNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENL***************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMAGIFRATNWGRLEIAGFPIYKRSLEIASSQNPIRHQSLKLVFKMAPAVQQNGSPEVKEPSPKIPKLHQNGVENDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query219 2.2.26 [Sep-21-2011]
Q9STG6166 Deoxyuridine 5'-triphosph yes no 0.739 0.975 0.803 1e-70
P32518169 Deoxyuridine 5'-triphosph N/A no 0.767 0.994 0.777 4e-69
Q10FF9171 Deoxyuridine 5'-triphosph yes no 0.694 0.888 0.777 5e-64
Q54BW5179 Deoxyuridine 5'-triphosph yes no 0.630 0.770 0.731 6e-53
Q9P6Q5140 Probable deoxyuridine 5'- yes no 0.621 0.971 0.713 1e-49
Q6BRN7160 Deoxyuridine 5'-triphosph yes no 0.625 0.856 0.611 1e-43
Q6MVL2165 Deoxyuridine 5'-triphosph N/A no 0.607 0.806 0.684 5e-43
P70583205 Deoxyuridine 5'-triphosph yes no 0.625 0.668 0.635 5e-43
C4YFC7159 Deoxyuridine 5'-triphosph N/A no 0.625 0.861 0.618 8e-43
P0CY19159 Deoxyuridine 5'-triphosph N/A no 0.625 0.861 0.618 8e-43
>sp|Q9STG6|DUT_ARATH Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Arabidopsis thaliana GN=DUT PE=1 SV=1 Back     alignment and function desciption
 Score =  266 bits (679), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 131/163 (80%), Positives = 147/163 (90%), Gaps = 1/163 (0%)

Query: 58  VKEPSPKIPKLHQNGVENDNIGS-LLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPA 116
           V EPSPK+ KL +NG+  D+  S   +VKKLSEKAV+P RGSPL+AGYDLSSA ++KVPA
Sbjct: 4   VNEPSPKLQKLDRNGIHGDSSPSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPA 63

Query: 117 RGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVD 176
           RGKAL+PTDLSIA+PEGTYARIAPRSGLAWKHS+DVGAGVIDADYRGPVGVILFNHSD D
Sbjct: 64  RGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDAD 123

Query: 177 FVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219
           F VK GDRIAQLIIEKIVTPDV+EV++LD TVRG+GGFGSTGV
Sbjct: 124 FEVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGFGSTGV 166
This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP, preventing uracil incorporation into DNA.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 2EC: 3
>sp|P32518|DUT_SOLLC Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Solanum lycopersicum PE=2 SV=1 Back     alignment and function description
>sp|Q10FF9|DUT_ORYSJ Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Oryza sativa subsp. japonica GN=DUT PE=2 SV=1 Back     alignment and function description
>sp|Q54BW5|DUT_DICDI Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Dictyostelium discoideum GN=dut PE=3 SV=1 Back     alignment and function description
>sp|Q9P6Q5|DUT_SCHPO Probable deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.05c PE=3 SV=1 Back     alignment and function description
>sp|Q6BRN7|DUT_DEBHA Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DUT1 PE=3 SV=1 Back     alignment and function description
>sp|Q6MVL2|DUT_NEUCR Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dut-1 PE=3 SV=1 Back     alignment and function description
>sp|P70583|DUT_RAT Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Rattus norvegicus GN=Dut PE=2 SV=3 Back     alignment and function description
>sp|C4YFC7|DUT_CANAW Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Candida albicans (strain WO-1) GN=DUT1 PE=3 SV=1 Back     alignment and function description
>sp|P0CY19|DUT_CANAL Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DUT1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query219
225458307242 PREDICTED: deoxyuridine 5'-triphosphate 0.977 0.884 0.688 8e-77
302142481176 unnamed protein product [Vitis vinifera] 0.794 0.988 0.812 6e-74
224070184170 predicted protein [Populus trichocarpa] 0.771 0.994 0.822 6e-74
147862089176 hypothetical protein VITISV_008069 [Viti 0.794 0.988 0.812 7e-74
359479127176 PREDICTED: deoxyuridine 5'-triphosphate 0.794 0.988 0.806 7e-73
297819298178 hypothetical protein ARALYDRAFT_905922 [ 0.771 0.949 0.794 8e-70
15232681166 dUTP pyrophosphatase [Arabidopsis thalia 0.739 0.975 0.803 6e-69
167013261169 Chain A, Structure Of Dutpase From Arabi 0.739 0.958 0.803 7e-69
449469995223 PREDICTED: deoxyuridine 5'-triphosphate 0.931 0.914 0.669 4e-68
356553208175 PREDICTED: deoxyuridine 5'-triphosphate 0.744 0.931 0.809 1e-67
>gi|225458307|ref|XP_002282840.1| PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  292 bits (747), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 159/231 (68%), Positives = 177/231 (76%), Gaps = 17/231 (7%)

Query: 2   MAGIFRATNWGRLEIAGFPIYKRSLEI-----------ASSQNPIRHQSLKLVFKMAPAV 50
           MAGI  A        AG  IY+ +L              SS+NP    SL  + +MA   
Sbjct: 16  MAGILGAITAKTPSHAGVVIYRPALPFFKTSIGQIFCNYSSRNP----SLNRLLRMAQHD 71

Query: 51  QQNGSPEVKEPSPKIPKLHQNGVENDNIG--SLLRVKKLSEKAVLPKRGSPLAAGYDLSS 108
            Q  SPE++EP+PK+ KLHQNGV  D+    SLLRVKKLSE+AVLP R SPL+AGYDLSS
Sbjct: 72  PQCRSPEIEEPAPKLQKLHQNGVSQDSQCPLSLLRVKKLSERAVLPSRASPLSAGYDLSS 131

Query: 109 AAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVI 168
           A ETKVPARGKALVPTDLSI IPEGTYARIAPRSGLAWK+S+DVGAGVIDADYRGPVGVI
Sbjct: 132 ATETKVPARGKALVPTDLSIGIPEGTYARIAPRSGLAWKYSIDVGAGVIDADYRGPVGVI 191

Query: 169 LFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219
           LFNHSDVDF VKVGDRIAQLIIEKI+TP+V+EVE+LDST RG GGFGSTGV
Sbjct: 192 LFNHSDVDFEVKVGDRIAQLIIEKIITPEVMEVEDLDSTERGVGGFGSTGV 242

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302142481|emb|CBI19684.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224070184|ref|XP_002303134.1| predicted protein [Populus trichocarpa] gi|118485217|gb|ABK94469.1| unknown [Populus trichocarpa] gi|222844860|gb|EEE82407.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147862089|emb|CAN82958.1| hypothetical protein VITISV_008069 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359479127|ref|XP_002263269.2| PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like [Vitis vinifera] gi|296083887|emb|CBI24275.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297819298|ref|XP_002877532.1| hypothetical protein ARALYDRAFT_905922 [Arabidopsis lyrata subsp. lyrata] gi|297323370|gb|EFH53791.1| hypothetical protein ARALYDRAFT_905922 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15232681|ref|NP_190278.1| dUTP pyrophosphatase [Arabidopsis thaliana] gi|75266320|sp|Q9STG6.1|DUT_ARATH RecName: Full=Deoxyuridine 5'-triphosphate nucleotidohydrolase; Short=dUTPase; AltName: Full=dUTP pyrophosphatase; AltName: Full=dUTP-pyrophosphatase-like 1; Short=AtDUT1 gi|13878143|gb|AAK44149.1|AF370334_1 putative dUTP pyrophosphatase [Arabidopsis thaliana] gi|5541665|emb|CAB51171.1| dUTP pyrophosphatase-like protein [Arabidopsis thaliana] gi|17104549|gb|AAL34163.1| putative dUTP pyrophosphatase [Arabidopsis thaliana] gi|332644701|gb|AEE78222.1| dUTP pyrophosphatase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|167013261|pdb|2P9O|A Chain A, Structure Of Dutpase From Arabidopsis Thaliana gi|167013262|pdb|2P9O|B Chain B, Structure Of Dutpase From Arabidopsis Thaliana gi|167013263|pdb|2P9O|C Chain C, Structure Of Dutpase From Arabidopsis Thaliana gi|167744878|pdb|2PC5|A Chain A, Native Crystal Structure Analysis On Arabidopsis Dutpase gi|167744879|pdb|2PC5|B Chain B, Native Crystal Structure Analysis On Arabidopsis Dutpase gi|167744880|pdb|2PC5|C Chain C, Native Crystal Structure Analysis On Arabidopsis Dutpase Back     alignment and taxonomy information
>gi|449469995|ref|XP_004152704.1| PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like [Cucumis sativus] gi|449496082|ref|XP_004160033.1| PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356553208|ref|XP_003544950.1| PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query219
TAIR|locus:2102817166 DUT1 "DUTP-PYROPHOSPHATASE-LIK 0.739 0.975 0.803 8.2e-67
DICTYBASE|DDB_G0293374179 dut "dUTP diphosphatase" [Dict 0.625 0.765 0.737 7.4e-50
POMBASE|SPAC644.05c140 dut1 "deoxyuridine 5'-triphosp 0.621 0.971 0.713 5.4e-47
ASPGD|ASPL0000062025208 AN0271 [Emericella nidulans (t 0.625 0.658 0.664 3.1e-44
FB|FBgn0250837188 dUTPase "Deoxyuridine triphosp 0.634 0.739 0.633 6.6e-42
CGD|CAL0004091159 DUT1 [Candida albicans (taxid: 0.625 0.861 0.618 1.2e-40
UNIPROTKB|P0CY19159 DUT1 "Deoxyuridine 5'-triphosp 0.625 0.861 0.618 1.2e-40
RGD|620849205 Dut "deoxyuridine triphosphata 0.625 0.668 0.635 5.3e-40
UNIPROTKB|P33316252 DUT "Deoxyuridine 5'-triphosph 0.739 0.642 0.550 6.8e-40
UNIPROTKB|E2RRF8237 DUT "Uncharacterized protein" 0.922 0.852 0.475 1.1e-39
TAIR|locus:2102817 DUT1 "DUTP-PYROPHOSPHATASE-LIKE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 131/163 (80%), Positives = 147/163 (90%)

Query:    58 VKEPSPKIPKLHQNGVENDNIGS-LLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPA 116
             V EPSPK+ KL +NG+  D+  S   +VKKLSEKAV+P RGSPL+AGYDLSSA ++KVPA
Sbjct:     4 VNEPSPKLQKLDRNGIHGDSSPSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPA 63

Query:   117 RGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVD 176
             RGKAL+PTDLSIA+PEGTYARIAPRSGLAWKHS+DVGAGVIDADYRGPVGVILFNHSD D
Sbjct:    64 RGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDAD 123

Query:   177 FVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219
             F VK GDRIAQLIIEKIVTPDV+EV++LD TVRG+GGFGSTGV
Sbjct:   124 FEVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGFGSTGV 166
GO:0004170 "dUTP diphosphatase activity" evidence=IEA;ISS
GO:0009394 "2'-deoxyribonucleotide metabolic process" evidence=ISS
GO:0016787 "hydrolase activity" evidence=IEA
GO:0046080 "dUTP metabolic process" evidence=IEA
GO:0000287 "magnesium ion binding" evidence=IDA
GO:0042802 "identical protein binding" evidence=IPI
GO:0006281 "DNA repair" evidence=IMP
GO:0005829 "cytosol" evidence=IDA
GO:0006261 "DNA-dependent DNA replication" evidence=RCA
DICTYBASE|DDB_G0293374 dut "dUTP diphosphatase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPAC644.05c dut1 "deoxyuridine 5'-triphosphate nucleotidohydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000062025 AN0271 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
FB|FBgn0250837 dUTPase "Deoxyuridine triphosphatase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
CGD|CAL0004091 DUT1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|P0CY19 DUT1 "Deoxyuridine 5'-triphosphate nucleotidohydrolase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
RGD|620849 Dut "deoxyuridine triphosphatase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P33316 DUT "Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RRF8 DUT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q10FF9DUT_ORYSJ3, ., 6, ., 1, ., 2, 30.77770.69400.8888yesno
Q6CQN7DUT_KLULA3, ., 6, ., 1, ., 2, 30.52410.65750.9729yesno
Q74ZF0DUT_ASHGO3, ., 6, ., 1, ., 2, 30.55790.62550.8954yesno
P32518DUT_SOLLC3, ., 6, ., 1, ., 2, 30.77770.76710.9940N/Ano
Q6C141DUT_YARLI3, ., 6, ., 1, ., 2, 30.61420.63010.8789yesno
Q54BW5DUT_DICDI3, ., 6, ., 1, ., 2, 30.73180.63010.7709yesno
Q9STG6DUT_ARATH3, ., 6, ., 1, ., 2, 30.80360.73970.9759yesno
Q9P6Q5DUT_SCHPO3, ., 6, ., 1, ., 2, 30.71320.62100.9714yesno
Q6BRN7DUT_DEBHA3, ., 6, ., 1, ., 2, 30.61150.62550.8562yesno
P33317DUT_YEAST3, ., 6, ., 1, ., 2, 30.51790.63010.9387yesno
P70583DUT_RAT3, ., 6, ., 1, ., 2, 30.63500.62550.6682yesno
Q6FKQ6DUT_CANGA3, ., 6, ., 1, ., 2, 30.56020.63920.9722yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.6.10.976
3rd Layer3.4.23LOW CONFIDENCE prediction!
3rd Layer3.6.1.230.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query219
PLN02547157 PLN02547, PLN02547, dUTP pyrophosphatase 1e-98
TIGR00576141 TIGR00576, dut, deoxyuridine 5'-triphosphate nucle 4e-72
PHA02703165 PHA02703, PHA02703, ORF007 dUTPase; Provisional 2e-61
COG0756148 COG0756, Dut, dUTPase [Nucleotide transport and me 2e-57
PHA03094144 PHA03094, PHA03094, dUTPase; Provisional 6e-57
pfam00692129 pfam00692, dUTPase, dUTPase 2e-50
PRK00601150 PRK00601, dut, deoxyuridine 5'-triphosphate nucleo 2e-49
cd0755792 cd07557, trimeric_dUTPase, Trimeric dUTP diphospha 4e-31
PTZ00143155 PTZ00143, PTZ00143, deoxyuridine 5'-triphosphate n 8e-13
PRK13956147 PRK13956, dut, deoxyuridine 5'-triphosphate nucleo 1e-10
COG0717183 COG0717, Dcd, Deoxycytidine deaminase [Nucleotide 5e-08
PHA03124418 PHA03124, PHA03124, dUTPase; Provisional 5e-06
TIGR02274179 TIGR02274, dCTP_deam, deoxycytidine triphosphate d 0.003
PRK02253167 PRK02253, PRK02253, deoxyuridine 5'-triphosphate n 0.004
>gnl|CDD|215302 PLN02547, PLN02547, dUTP pyrophosphatase Back     alignment and domain information 
 Score =  282 bits (724), Expect = 1e-98
 Identities = 133/164 (81%), Positives = 141/164 (85%), Gaps = 10/164 (6%)

Query: 56  PEVKEPSPKIPKLHQNGVENDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVP 115
           P V+EP PKI K             LLRVKKLSEKA LP RGS LAAGYDLSSA +T VP
Sbjct: 1   PAVQEPPPKIQK----------PSPLLRVKKLSEKATLPSRGSALAAGYDLSSAYDTVVP 50

Query: 116 ARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDV 175
           ARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHS+DVGAGVIDADYRGPVGVILFNHSDV
Sbjct: 51  ARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDV 110

Query: 176 DFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219
           DF VKVGDRIAQLI+EKIVTP+V+EVE+LD+TVRG GGFGSTGV
Sbjct: 111 DFEVKVGDRIAQLILEKIVTPEVVEVEDLDATVRGAGGFGSTGV 154

Length = 157
>gnl|CDD|129666 TIGR00576, dut, deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) Back     alignment and domain information
>gnl|CDD|165079 PHA02703, PHA02703, ORF007 dUTPase; Provisional Back     alignment and domain information
>gnl|CDD|223827 COG0756, Dut, dUTPase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|165376 PHA03094, PHA03094, dUTPase; Provisional Back     alignment and domain information
>gnl|CDD|201398 pfam00692, dUTPase, dUTPase Back     alignment and domain information
>gnl|CDD|234802 PRK00601, dut, deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|143638 cd07557, trimeric_dUTPase, Trimeric dUTP diphosphatases Back     alignment and domain information
>gnl|CDD|240288 PTZ00143, PTZ00143, deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|184417 PRK13956, dut, deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|223789 COG0717, Dcd, Deoxycytidine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|165396 PHA03124, PHA03124, dUTPase; Provisional Back     alignment and domain information
>gnl|CDD|233806 TIGR02274, dCTP_deam, deoxycytidine triphosphate deaminase Back     alignment and domain information
>gnl|CDD|179395 PRK02253, PRK02253, deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 219
PLN02547157 dUTP pyrophosphatase 100.0
PHA03094144 dUTPase; Provisional 100.0
PHA02703165 ORF007 dUTPase; Provisional 100.0
COG0756148 Dut dUTPase [Nucleotide transport and metabolism] 100.0
TIGR00576141 dut deoxyuridine 5'-triphosphate nucleotidohydrola 100.0
PRK00601150 dut deoxyuridine 5'-triphosphate nucleotidohydrola 100.0
PTZ00143155 deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
PRK13956147 dut deoxyuridine 5'-triphosphate nucleotidohydrola 100.0
KOG3370140 consensus dUTPase [Nucleotide transport and metabo 100.0
PF00692129 dUTPase: dUTPase; InterPro: IPR008180 Synonym(s): 100.0
PHA03124418 dUTPase; Provisional 100.0
PHA03123402 dUTPase; Provisional 100.0
PHA03126326 dUTPase; Provisional 99.97
PHA03130368 dUTPase; Provisional 99.96
PHA03127322 dUTPase; Provisional 99.96
PHA03129436 dUTPase; Provisional 99.95
PHA03131286 dUTPase; Provisional 99.94
cd0755792 trimeric_dUTPase Trimeric dUTP diphosphatases. Tri 99.94
PHA03131 286 dUTPase; Provisional 99.92
PHA01707158 dut 2'-deoxyuridine 5'-triphosphatase 99.88
TIGR02274179 dCTP_deam deoxycytidine triphosphate deaminase. Me 99.88
PRK00416177 dcd deoxycytidine triphosphate deaminase; Reviewed 99.84
COG0717183 Dcd Deoxycytidine deaminase [Nucleotide transport 99.78
PHA03129 436 dUTPase; Provisional 99.76
PRK02253167 deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.76
PRK07559 365 2'-deoxycytidine 5'-triphosphate deaminase; Provis 99.51
PHA03127 322 dUTPase; Provisional 99.48
PHA03128376 dUTPase; Provisional 99.3
PRK07559365 2'-deoxycytidine 5'-triphosphate deaminase; Provis 99.22
PHA03128 376 dUTPase; Provisional 99.15
PHA03125376 dUTPase; Provisional 99.07
PF06559 364 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (D 98.95
PHA03125 376 dUTPase; Provisional 98.79
PHA03126 326 dUTPase; Provisional 98.61
PHA03123 402 dUTPase; Provisional 97.44
PHA03130 368 dUTPase; Provisional 97.32
PF04797379 Herpes_ORF11: Herpesvirus dUTPase protein; InterPr 96.52
PF06559364 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (D 96.43
PF05784348 Herpes_UL82_83: Betaherpesvirus UL82/83 protein N 96.15
PHA03365419 hypothetical protein; Provisional 88.07
PF06284530 Cytomega_UL84: Cytomegalovirus UL84 protein; Inter 80.03
>PLN02547 dUTP pyrophosphatase Back     alignment and domain information 
Probab=100.00  E-value=2.8e-48  Score=321.77  Aligned_cols=154  Identities=86%  Similarity=1.291  Sum_probs=147.3

Q ss_pred             CCcCCCCCCCcccccCCccccCCcceEEEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCce
Q 027765           56 PEVKEPSPKIPKLHQNGVENDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTY  135 (219)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~  135 (219)
                      |.+.||++|++|          .-+.++||++++++++|+|++++||||||+++++++|+|++.++|+||+++++|+||+
T Consensus         1 ~~~~~~~~~~~~----------~~~~i~vk~l~~~a~lP~r~t~g~AG~DL~~~~d~~i~P~~~~li~tgi~v~iP~g~~   70 (157)
T PLN02547          1 PAVQEPPPKIQK----------PSPLLRVKKLSEKATLPSRGSALAAGYDLSSAYDTVVPARGKALVPTDLSIAIPEGTY   70 (157)
T ss_pred             CcccCCCccccC----------CCceEEEEEeCCCCCCCCcCCCCccCeeEecCCCeEECCCCEEEEEeceEEEcCCCeE
Confidence            567899999884          3458999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCC
Q 027765          136 ARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFG  215 (219)
Q Consensus       136 g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFG  215 (219)
                      |+|++||||++|++|.+.+|+||+||+|||++.|+|++++++.|++|||||||||.++..+++++|++|++|+||+||||
T Consensus        71 g~i~~RSgla~k~gi~~~~GvID~~Y~Gei~v~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFG  150 (157)
T PLN02547         71 ARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDVDFEVKVGDRIAQLILEKIVTPEVVEVEDLDATVRGAGGFG  150 (157)
T ss_pred             EEEEccccccccCcEecCCceECCCCCCceEEEEEeCCCCCEEEcCCCEEEEEEEEEeeeccEEEecccCcccccCCCcC
Confidence            99999999999988888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCC
Q 027765          216 STGV  219 (219)
Q Consensus       216 STG~  219 (219)
                      |||+
T Consensus       151 STG~  154 (157)
T PLN02547        151 STGV  154 (157)
T ss_pred             cCcc
Confidence            9995

>PHA03094 dUTPase; Provisional Back     alignment and domain information
>PHA02703 ORF007 dUTPase; Provisional Back     alignment and domain information
>COG0756 Dut dUTPase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR00576 dut deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) Back     alignment and domain information
>PRK00601 dut deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>PTZ00143 deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>PRK13956 dut deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>KOG3370 consensus dUTPase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF00692 dUTPase: dUTPase; InterPro: IPR008180 Synonym(s): dUTP diphosphatase, Deoxyuridine-triphosphatase The essential enzyme dUTP pyrophosphatase (3 Back     alignment and domain information
>PHA03124 dUTPase; Provisional Back     alignment and domain information
>PHA03123 dUTPase; Provisional Back     alignment and domain information
>PHA03126 dUTPase; Provisional Back     alignment and domain information
>PHA03130 dUTPase; Provisional Back     alignment and domain information
>PHA03127 dUTPase; Provisional Back     alignment and domain information
>PHA03129 dUTPase; Provisional Back     alignment and domain information
>PHA03131 dUTPase; Provisional Back     alignment and domain information
>cd07557 trimeric_dUTPase Trimeric dUTP diphosphatases Back     alignment and domain information
>PHA03131 dUTPase; Provisional Back     alignment and domain information
>PHA01707 dut 2'-deoxyuridine 5'-triphosphatase Back     alignment and domain information
>TIGR02274 dCTP_deam deoxycytidine triphosphate deaminase Back     alignment and domain information
>PRK00416 dcd deoxycytidine triphosphate deaminase; Reviewed Back     alignment and domain information
>COG0717 Dcd Deoxycytidine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>PHA03129 dUTPase; Provisional Back     alignment and domain information
>PRK02253 deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>PRK07559 2'-deoxycytidine 5'-triphosphate deaminase; Provisional Back     alignment and domain information
>PHA03127 dUTPase; Provisional Back     alignment and domain information
>PHA03128 dUTPase; Provisional Back     alignment and domain information
>PRK07559 2'-deoxycytidine 5'-triphosphate deaminase; Provisional Back     alignment and domain information
>PHA03128 dUTPase; Provisional Back     alignment and domain information
>PHA03125 dUTPase; Provisional Back     alignment and domain information
>PF06559 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); InterPro: IPR010550 This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (3 Back     alignment and domain information
>PHA03125 dUTPase; Provisional Back     alignment and domain information
>PHA03126 dUTPase; Provisional Back     alignment and domain information
>PHA03123 dUTPase; Provisional Back     alignment and domain information
>PHA03130 dUTPase; Provisional Back     alignment and domain information
>PF04797 Herpes_ORF11: Herpesvirus dUTPase protein; InterPro: IPR006882 This family of proteins are found in Herpesvirus Back     alignment and domain information
>PF06559 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); InterPro: IPR010550 This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (3 Back     alignment and domain information
>PF05784 Herpes_UL82_83: Betaherpesvirus UL82/83 protein N terminus; InterPro: IPR008649 This family represents the N-terminal region of the UL82 and UL83 proteins from Betaherpesvirus sp Back     alignment and domain information
>PHA03365 hypothetical protein; Provisional Back     alignment and domain information
>PF06284 Cytomega_UL84: Cytomegalovirus UL84 protein; InterPro: IPR010436 This family consists of several Cytomegalovirus UL84 proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query219
2p9o_A169 Structure Of Dutpase From Arabidopsis Thaliana Leng 1e-71
3so2_A146 Chlorella Dutpase Length = 146 1e-49
3ecy_A160 Crystal Structural Analysis Of Drosophila Melanogas 9e-46
2hqu_A164 Human Dutpase In Complex With Alpha,Beta-Iminodutp 6e-43
1q5h_A147 Human Dutp Pyrophosphatase Complex With Dudp Length 9e-43
3c3i_A141 Evolution Of Chlorella Virus Dutpase Length = 141 3e-42
3ca9_A165 Evolution Of Chlorella Virus Dutpase Length = 165 8e-42
3c2t_A141 Evolution Of Chlorella Virus Dutpase Length = 141 4e-41
3p48_A147 Structure Of The Yeast Dutpase Dut1 In Complex With 2e-37
3f4f_A167 Crystal Structure Of Dut1p, A Dutpase From Saccharo 2e-37
2okd_A147 High Resolution Crystal Structures Of Vaccinia Viru 2e-36
3lqw_A163 Crystal Structure Of Deoxyuridine 5-Triphosphate Nu 4e-35
2okb_A137 High Resolution Crystal Structures Of Vaccinia Viru 2e-34
3mbq_A178 Crystal Structure Of Deoxyuridine 5-Triphosphate Nu 2e-20
3zf2_A207 Phage Dutpases Control Transfer Of Virulence Genes 3e-19
3zf5_A207 Phage Dutpases Control Transfer Of Virulence Genes 9e-19
3zf1_A207 Phage Dutpases Control Transfer Of Virulence Genes 9e-19
3zf0_A207 Phage Dutpases Control Transfer Of Virulence Genes 3e-18
3zf6_A207 Phage Dutpases Control Transfer Of Virulence Genes 3e-18
3zf3_A207 Phage Dutpases Control Transfer Of Virulence Genes 4e-18
3zf4_A207 Phage Dutpases Control Transfer Of Virulence Genes 4e-18
4gk6_A138 X-Ray Crystal Structure Of A Hypothetical Deoxyurid 3e-17
3tqz_A155 Structure Of A Deoxyuridine 5'-Triphosphate Nucleot 2e-16
1euw_A152 Atomic Resolution Structure Of E. Coli Dutpase Leng 5e-16
1dup_A152 Deoxyuridine 5'-Triphosphate Nucleotido Hydrolase ( 5e-16
1rnj_A152 Crystal Structure Of Inactive Mutant Dutpase Comple 2e-15
3loj_A174 Structure Of Mycobacterium Tuberculosis Dutpase H14 9e-14
3hza_A174 Crystal Structure Of Dutpase H145w Mutant Length = 9e-14
1six_A174 Mycobacterium Tuberculosis Dutpase Complexed With M 9e-14
3i93_A158 Crystal Structure Of Mycobacterium Tuberculosis Dut 1e-13
1sjn_A170 Mycobacterium Tuberculosis Dutpase Complexed With M 1e-13
1mq7_A154 Crystal Structure Of Dutpase From Mycobacterium Tub 2e-13
3h6d_A174 Structure Of The Mycobacterium Tuberculosis Dutpase 3e-13
1dut_A133 Fiv Dutp Pyrophosphatase Length = 133 1e-11
1f7d_A136 Crystal Structures Of Feline Immunodeficiency Virus 1e-11
1duc_A134 Eiav Dutpase DudpSTRONTIUM COMPLEX Length = 134 2e-10
2xcd_A144 Structure Of Yncf,The Genomic Dutpase From Bacillus 8e-09
2d4n_A152 Crystal Structure Of M-Pmv Dutpase Complexed With D 9e-09
2d4l_A152 Crystal Structure Of Truncated In C-Terminal M-Pmv 1e-08
2baz_A142 Structure Of Yoss, A Putative Dutpase From Bacillus 2e-08
3t64_A181 5'-Diphenyl Nucleoside Inhibitors Of Plasmodium Fal 1e-07
3t60_A181 5'-Diphenyl Nucleoside Inhibitors Of Plasmodium Fal 1e-07
1vyq_A173 Novel Inhibitors Of Plasmodium Falciparum Dutpase P 1e-07
3h6x_A148 Crystal Structure Of Dutpase From Streptococcus Mut 3e-07
>pdb|2P9O|A Chain A, Structure Of Dutpase From Arabidopsis Thaliana Length = 169 Back     alignment and structure 
Iteration: 1

 Score =  265 bits (678), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 131/163 (80%), Positives = 147/163 (90%), Gaps = 1/163 (0%)
Query: 58  VKEPSPKIPKLHQNGVENDNIGS-LLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPA 116
           V EPSPK+ KL +NG+  D+  S   +VKKLSEKAV+P RGSPL+AGYDLSSA ++KVPA
Sbjct: 7   VNEPSPKLQKLDRNGIHGDSSPSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPA 66
Query: 117 RGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVD 176
           RGKAL+PTDLSIA+PEGTYARIAPRSGLAWKHS+DVGAGVIDADYRGPVGVILFNHSD D
Sbjct: 67  RGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDAD 126
Query: 177 FVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219
           F VK GDRIAQLIIEKIVTPDV+EV++LD TVRG+GGFGSTGV
Sbjct: 127 FEVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGFGSTGV 169
>pdb|3SO2|A Chain A, Chlorella Dutpase Length = 146 Back     alignment and structure
>pdb|3ECY|A Chain A, Crystal Structural Analysis Of Drosophila Melanogaster Dutpase Length = 160 Back     alignment and structure
>pdb|2HQU|A Chain A, Human Dutpase In Complex With Alpha,Beta-Iminodutp And Magnesium Ion Length = 164 Back     alignment and structure
>pdb|1Q5H|A Chain A, Human Dutp Pyrophosphatase Complex With Dudp Length = 147 Back     alignment and structure
>pdb|3C3I|A Chain A, Evolution Of Chlorella Virus Dutpase Length = 141 Back     alignment and structure
>pdb|3CA9|A Chain A, Evolution Of Chlorella Virus Dutpase Length = 165 Back     alignment and structure
>pdb|3C2T|A Chain A, Evolution Of Chlorella Virus Dutpase Length = 141 Back     alignment and structure
>pdb|3P48|A Chain A, Structure Of The Yeast Dutpase Dut1 In Complex With Dumpnpp Length = 147 Back     alignment and structure
>pdb|3F4F|A Chain A, Crystal Structure Of Dut1p, A Dutpase From Saccharomyces Cerevisiae Length = 167 Back     alignment and structure
>pdb|2OKD|A Chain A, High Resolution Crystal Structures Of Vaccinia Virus Dutpase Length = 147 Back     alignment and structure
>pdb|3LQW|A Chain A, Crystal Structure Of Deoxyuridine 5-Triphosphate Nucleotidohydrolase From Entamoeba Histolytica Length = 163 Back     alignment and structure
>pdb|2OKB|A Chain A, High Resolution Crystal Structures Of Vaccinia Virus Dutpase Length = 137 Back     alignment and structure
>pdb|3MBQ|A Chain A, Crystal Structure Of Deoxyuridine 5-Triphosphate Nucleotidohydrolase From Brucella Melitensis, Orthorhombic Crystal Form Length = 178 Back     alignment and structure
>pdb|4GK6|A Chain A, X-Ray Crystal Structure Of A Hypothetical Deoxyuridine 5-Triphosphate Nucleotidohydrolase From Mycobacterium Abscessus Length = 138 Back     alignment and structure
>pdb|3TQZ|A Chain A, Structure Of A Deoxyuridine 5'-Triphosphate Nucleotidohydrolase (Dut) From Coxiella Burnetii Length = 155 Back     alignment and structure
>pdb|1EUW|A Chain A, Atomic Resolution Structure Of E. Coli Dutpase Length = 152 Back     alignment and structure
>pdb|1DUP|A Chain A, Deoxyuridine 5'-Triphosphate Nucleotido Hydrolase (D-Utpase) Length = 152 Back     alignment and structure
>pdb|1RNJ|A Chain A, Crystal Structure Of Inactive Mutant Dutpase Complexed With Substrate Analogue Imido-Dutp Length = 152 Back     alignment and structure
>pdb|3LOJ|A Chain A, Structure Of Mycobacterium Tuberculosis Dutpase H145a Mutant Length = 174 Back     alignment and structure
>pdb|3HZA|A Chain A, Crystal Structure Of Dutpase H145w Mutant Length = 174 Back     alignment and structure
>pdb|1SIX|A Chain A, Mycobacterium Tuberculosis Dutpase Complexed With Magnesium And Alpha, Beta-Imido-Dutp Length = 174 Back     alignment and structure
>pdb|3I93|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Dutpase Stop138t Mutant Length = 158 Back     alignment and structure
>pdb|1SJN|A Chain A, Mycobacterium Tuberculosis Dutpase Complexed With Magnesium And Alpha, Beta-Imido-Dutp Length = 170 Back     alignment and structure
>pdb|1MQ7|A Chain A, Crystal Structure Of Dutpase From Mycobacterium Tuberculosis (rv2697c) Length = 154 Back     alignment and structure
>pdb|3H6D|A Chain A, Structure Of The Mycobacterium Tuberculosis Dutpase D28n Mutant Length = 174 Back     alignment and structure
>pdb|1DUT|A Chain A, Fiv Dutp Pyrophosphatase Length = 133 Back     alignment and structure
>pdb|1F7D|A Chain A, Crystal Structures Of Feline Immunodeficiency Virus Dutp Pyrophosphatase And Its Nucleotide Complexes In Three Crystal Forms Length = 136 Back     alignment and structure
>pdb|1DUC|A Chain A, Eiav Dutpase DudpSTRONTIUM COMPLEX Length = 134 Back     alignment and structure
>pdb|2XCD|A Chain A, Structure Of Yncf,The Genomic Dutpase From Bacillus Subtilis Length = 144 Back     alignment and structure
>pdb|2D4N|A Chain A, Crystal Structure Of M-Pmv Dutpase Complexed With Dupnpp, Substrate Analogue Length = 152 Back     alignment and structure
>pdb|2D4L|A Chain A, Crystal Structure Of Truncated In C-Terminal M-Pmv Dutpase Length = 152 Back     alignment and structure
>pdb|2BAZ|A Chain A, Structure Of Yoss, A Putative Dutpase From Bacillus Subtilis Length = 142 Back     alignment and structure
>pdb|3T64|A Chain A, 5'-Diphenyl Nucleoside Inhibitors Of Plasmodium Falciparum Dutpase Length = 181 Back     alignment and structure
>pdb|3T60|A Chain A, 5'-Diphenyl Nucleoside Inhibitors Of Plasmodium Falciparum Dutpase Length = 181 Back     alignment and structure
>pdb|1VYQ|A Chain A, Novel Inhibitors Of Plasmodium Falciparum Dutpase Provide A Platform For Anti-Malarial Drug Design Length = 173 Back     alignment and structure
>pdb|3H6X|A Chain A, Crystal Structure Of Dutpase From Streptococcus Mutans Length = 148 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query219
2p9o_A169 DUTP pyrophosphatase-like protein; dutpase, magnes 4e-87
3c2t_A141 Deoxyuridine triphosphatase; dutpase chlorella vir 1e-82
3so2_A146 Putative uncharacterized protein; deoxyuridine tri 5e-82
3ca9_A165 Deoxyuridine triphosphatase; dutpase chlorella vir 6e-82
3ecy_A160 CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, 2e-81
3lqw_A163 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 2e-81
3ara_A164 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 3e-80
2ol1_A147 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 4e-80
3p48_A147 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 1e-79
3f4f_A167 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 4e-79
1dun_A134 Deoxyuridine 5'-triphosphate nucleoditohydrolase; 3e-75
1f7d_A136 POL polyprotein; eight stranded beta-barrel, viral 1e-71
3hza_A174 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 2e-69
3tq5_A152 Deoxyuridine 5'-triphosphate nucleotido hydrolase; 2e-64
2xx6_A142 SPBC2 prophage-derived deoxyuridine 5'-triphospha 4e-62
3h6x_A148 Dutpase; jelly-roll beta-barrel, hydrolase; 1.70A 2e-56
3mdx_A178 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 2e-53
3tqz_A155 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 7e-52
1euw_A152 Dutpase, deoxyuridine 5'-triphosphate nucleotidohy 3e-51
2y8c_A173 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 3e-45
2bsy_A278 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 1e-29
2bsy_A 278 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 7e-13
2qxx_A190 DCTP deaminase, deoxycytidine triphosphate deamina 6e-08
2yzj_A169 167AA long hypothetical dutpase; all beta proteins 1e-06
3km3_A206 DCTP deaminase, deoxycytidine triphosphate deamina 4e-06
1xs1_A193 DCTP deaminase, deoxycytidine triphosphate deamina 1e-05
4dhk_A191 DCTP deaminase, deoxycytidine triphosphate deamina 2e-05
1pkh_A204 Bifunctional deaminase/diphosphatase; DCTP deamina 3e-05
2r9q_A370 AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deami 7e-05
>2p9o_A DUTP pyrophosphatase-like protein; dutpase, magnesium binding, hydrolase; 2.00A {Arabidopsis thaliana} PDB: 2pc5_A Length = 169 Back     alignment and structure
 Score =  253 bits (649), Expect = 4e-87
 Identities = 131/166 (78%), Positives = 147/166 (88%), Gaps = 1/166 (0%)

Query: 55  SPEVKEPSPKIPKLHQNGVENDNIGSL-LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETK 113
              V EPSPK+ KL +NG+  D+  S   +VKKLSEKAV+P RGSPL+AGYDLSSA ++K
Sbjct: 4   MACVNEPSPKLQKLDRNGIHGDSSPSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSK 63

Query: 114 VPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHS 173
           VPARGKAL+PTDLSIA+PEGTYARIAPRSGLAWKHS+DVGAGVIDADYRGPVGVILFNHS
Sbjct: 64  VPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHS 123

Query: 174 DVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219
           D DF VK GDRIAQLIIEKIVTPDV+EV++LD TVRG+GGFGSTGV
Sbjct: 124 DADFEVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGFGSTGV 169
>3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A* Length = 141 Back     alignment and structure
>3so2_A Putative uncharacterized protein; deoxyuridine triphosphatase, dutpase, cancer MARK hydrolase; 1.64A {Chlorella variabilis} Length = 146 Back     alignment and structure
>3ca9_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} Length = 165 Back     alignment and structure
>3ecy_A CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, dimeric assembly, hydrolase; 1.88A {Drosophila melanogaster} Length = 160 Back     alignment and structure
>3lqw_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; emerald biostructures, ALS collaborative crystallography; 1.30A {Entamoeba histolytica} Length = 163 Back     alignment and structure
>3ara_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; magnesium binding, hydrolase-hydrolase inhibitor; HET: MKH; 1.70A {Homo sapiens} PDB: 2hqu_A* 3arn_A* 3ehw_A* 1q5h_A* 1q5u_X Length = 164 Back     alignment and structure
>2ol1_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; fold, jelly-roll, superfamily, dutpase-like; HET: UMP; 1.80A {Vaccinia virus} PDB: 2oke_A* 2okd_A* 2ol0_A* 2okb_A Length = 147 Back     alignment and structure
>3p48_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, DUMPPNP pyrophosphatase, phosphoprotein, structural genomics; HET: DUP; 1.67A {Saccharomyces cerevisiae} Length = 147 Back     alignment and structure
>3f4f_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, UMP, product complex, DUTP pyrophosphat DITP; HET: UMP; 2.00A {Saccharomyces cerevisiae} PDB: 3hhq_A Length = 167 Back     alignment and structure
>1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} SCOP: b.85.4.1 PDB: 1duc_A Length = 134 Back     alignment and structure
>1f7d_A POL polyprotein; eight stranded beta-barrel, viral protein, hydrolase; 1.40A {Feline immunodeficiency virus} SCOP: b.85.4.1 PDB: 1f7k_A* 1f7n_A* 1f7o_A 1f7p_A* 1f7q_A* 1f7r_A* 1dut_A Length = 136 Back     alignment and structure
>3hza_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, domain swapping, nucleotide metabolis; HET: DUP; 1.20A {Mycobacterium tuberculosis} PDB: 3loj_A* 1six_A* 1slh_A* 1sm8_A* 1smc_A* 1snf_A* 2py4_A* 3h6d_A* 3i93_A* 1mq7_A 1sjn_A* Length = 174 Back     alignment and structure
>3tq5_A Deoxyuridine 5'-triphosphate nucleotido hydrolase; jelly roll; HET: UMP; 1.40A {Mason-pfizer monkey virus} PDB: 2d4m_A 2d4l_A* 3tp1_A* 3tpn_A* 3tps_A* 3tpw_A* 3tpy_A* 3tq3_A* 3tq4_A* 2d4n_A* 3trl_A* 3trn_A* 3ts6_A* 3tsl_A* 3tta_A* Length = 152 Back     alignment and structure
>2xx6_A SPBC2 prophage-derived deoxyuridine 5'-triphospha nucleotidohydrolase YOSS; 1.74A {Bacillus subtilis} PDB: 2baz_A 2xy3_A* 2y1t_A* 2xcd_A 2xce_A* Length = 142 Back     alignment and structure
>3h6x_A Dutpase; jelly-roll beta-barrel, hydrolase; 1.70A {Streptococcus mutans} Length = 148 Back     alignment and structure
>3mdx_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; metal-binding, nucleotide metabolism, structural genomics; 1.45A {Brucella melitensis} PDB: 3mbq_A Length = 178 Back     alignment and structure
>3tqz_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; purines, pyrimidines, nucleosides, nucleotides; 1.75A {Coxiella burnetii} Length = 155 Back     alignment and structure
>1euw_A Dutpase, deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, mercury derivative; 1.05A {Escherichia coli} SCOP: b.85.4.1 PDB: 1dud_A 1dup_A 1eu5_A 1rn8_A* 1seh_A* 2hr6_A* 2hrm_A* 1rnj_A* 1syl_A* Length = 152 Back     alignment and structure
>2y8c_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; malaria; HET: DUQ; 2.10A {Plasmodium falciparum} PDB: 1vyq_A* Length = 173 Back     alignment and structure
>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A* Length = 278 Back     alignment and structure
>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A* Length = 278 Back     alignment and structure
>2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis} PDB: 2qlp_A* Length = 190 Back     alignment and structure
>2yzj_A 167AA long hypothetical dutpase; all beta proteins, hypothetical protein, NPPSFA; HET: DUD; 1.66A {Sulfolobus tokodaii} PDB: 2zdc_A Length = 169 Back     alignment and structure
>3km3_A DCTP deaminase, deoxycytidine triphosphate deaminase; ssgcid, NIH, niaid, SBRI, UW, decode, deoxycytidine triphosp deaminase; 2.10A {Anaplasma phagocytophilum} Length = 206 Back     alignment and structure
>1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} SCOP: b.85.4.1 PDB: 2v9x_A* 1xs6_A* 1xs4_A* 2j4q_A* 2j4h_A* Length = 193 Back     alignment and structure
>4dhk_A DCTP deaminase, deoxycytidine triphosphate deaminase; hydrolase; 2.05A {Burkholderia thailandensis} Length = 191 Back     alignment and structure
>1pkh_A Bifunctional deaminase/diphosphatase; DCTP deaminase, dutpase, DCD-DUT, MJ0430, DCTP, DUTP, hydrolase; 1.42A {Methanocaldococcus jannaschii} SCOP: b.85.4.1 PDB: 1ogh_A 1pkj_A* 1pkk_A* 2hxb_A 2hxe_A 3gf0_A 2hxd_A* Length = 204 Back     alignment and structure
>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genom MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} Length = 370 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query219
2p9o_A169 DUTP pyrophosphatase-like protein; dutpase, magnes 100.0
3so2_A146 Putative uncharacterized protein; deoxyuridine tri 100.0
3ecy_A160 CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, 100.0
3p48_A147 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
3f4f_A167 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
3lqw_A163 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
3c2t_A141 Deoxyuridine triphosphatase; dutpase chlorella vir 100.0
2ol1_A147 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
3ara_A164 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
3hza_A174 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
3ca9_A165 Deoxyuridine triphosphatase; dutpase chlorella vir 100.0
3tqz_A155 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
3mdx_A178 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
1euw_A152 Dutpase, deoxyuridine 5'-triphosphate nucleotidohy 100.0
2xx6_A142 SPBC2 prophage-derived deoxyuridine 5'-triphospha 100.0
3t64_A181 Deoxyuridine 5'-triphosphate nucleotidohydrolase,; 100.0
1dun_A134 Deoxyuridine 5'-triphosphate nucleoditohydrolase; 100.0
1f7d_A136 POL polyprotein; eight stranded beta-barrel, viral 100.0
3h6x_A148 Dutpase; jelly-roll beta-barrel, hydrolase; 1.70A 100.0
3tq5_A152 Deoxyuridine 5'-triphosphate nucleotido hydrolase; 100.0
2bsy_A278 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
2bsy_A 278 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.92
2qxx_A190 DCTP deaminase, deoxycytidine triphosphate deamina 99.9
1xs1_A193 DCTP deaminase, deoxycytidine triphosphate deamina 99.9
4dhk_A191 DCTP deaminase, deoxycytidine triphosphate deamina 99.87
3km3_A206 DCTP deaminase, deoxycytidine triphosphate deamina 99.86
2yzj_A169 167AA long hypothetical dutpase; all beta proteins 99.85
1pkh_A204 Bifunctional deaminase/diphosphatase; DCTP deamina 99.83
2r9q_A 370 AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deami 99.79
2r9q_A370 AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deami 99.71
>2p9o_A DUTP pyrophosphatase-like protein; dutpase, magnesium binding, hydrolase; 2.00A {Arabidopsis thaliana} PDB: 2pc5_A Back     alignment and structure
Probab=100.00  E-value=4.7e-50  Score=334.74  Aligned_cols=164  Identities=79%  Similarity=1.245  Sum_probs=125.6

Q ss_pred             CCcCCCCCCCcccccCCc-cccCCcceEEEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCc
Q 027765           56 PEVKEPSPKIPKLHQNGV-ENDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGT  134 (219)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~-~~~~~~~~l~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~  134 (219)
                      +..++|.+|..|+..+.. ...++.+.++|+++++++.+|+|+|.+||||||+++++++|+||++++|+||++++||+||
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~lP~~~t~~sAG~DL~a~~~~~I~Pge~~lV~Tgi~i~iP~g~   84 (169)
T 2p9o_A            5 ACVNEPSPKLQKLDRNGIHGDSSPSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPARGKALIPTDLSIAVPEGT   84 (169)
T ss_dssp             ------------------------CCCCEEEESSTTCCCCBCSSTTCSCEEEECSSCEEECTTCEEEEEEEEEEECCTTE
T ss_pred             ccccCcccccchhhhhcccccCCCcceEEEEECCCCCCCCccCCCCCceEEEECCCCEEECCCCEEEEECCcEEEcCCCe
Confidence            344677788888777654 2223567899999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCC
Q 027765          135 YARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGF  214 (219)
Q Consensus       135 ~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGF  214 (219)
                      +++|++|||++.|+||.+.+|+||+||||||+++|+|+++++++|++|||||||||.++..+.|++|++|++|+||+|||
T Consensus        85 ~~~I~pRSsla~K~GI~v~~GvID~dYrGeI~v~l~N~~~~~~~I~~GdRIAQlV~~~~~~~~~~~v~~l~~t~RG~gGF  164 (169)
T 2p9o_A           85 YARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDADFEVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGF  164 (169)
T ss_dssp             EEEEECCHHHHHHHCEEEECCEEETTCCSCEEEEEEECSSSCEEECTTCEEEEEEEEEEECCCEEECSCCCC--------
T ss_pred             EEEEEeCCcccccCCEEEcCceeCCCCCceEEEEEEeCCCCCeEccCCCEEEEEEEEeCCcCcEEEcCccCCCcCCCcCC
Confidence            99999999999899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcCC
Q 027765          215 GSTGV  219 (219)
Q Consensus       215 GSTG~  219 (219)
                      ||||+
T Consensus       165 GSTG~  169 (169)
T 2p9o_A          165 GSTGV  169 (169)
T ss_dssp             -----
T ss_pred             CCCCC
Confidence            99995
>3so2_A Putative uncharacterized protein; deoxyuridine triphosphatase, dutpase, cancer MARK hydrolase; 1.64A {Chlorella variabilis} Back     alignment and structure
>3ecy_A CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, dimeric assembly, hydrolase; 1.88A {Drosophila melanogaster} Back     alignment and structure
>3p48_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, DUMPPNP pyrophosphatase, phosphoprotein, structural genomics; HET: DUP; 1.67A {Saccharomyces cerevisiae} SCOP: b.85.4.0 Back     alignment and structure
>3f4f_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, UMP, product complex, DUTP pyrophosphat DITP; HET: UMP; 2.00A {Saccharomyces cerevisiae} PDB: 3hhq_A Back     alignment and structure
>3lqw_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; emerald biostructures, ALS collaborative crystallography; 1.30A {Entamoeba histolytica} Back     alignment and structure
>3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A* Back     alignment and structure
>2ol1_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; fold, jelly-roll, superfamily, dutpase-like; HET: UMP; 1.80A {Vaccinia virus} PDB: 2oke_A* 2okd_A* 2ol0_A* 2okb_A Back     alignment and structure
>3ara_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; magnesium binding, hydrolase-hydrolase inhibitor; HET: MKH; 1.70A {Homo sapiens} PDB: 2hqu_A* 3arn_A* 3ehw_A* 1q5h_A* 1q5u_X Back     alignment and structure
>3hza_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, domain swapping, nucleotide metabolis; HET: DUP; 1.20A {Mycobacterium tuberculosis} SCOP: b.85.4.1 PDB: 3loj_A* 1six_A* 1slh_A* 1sm8_A* 1smc_A* 1snf_A* 2py4_A* 3h6d_A* 3i93_A* 1mq7_A 1sjn_A* 4gk6_A Back     alignment and structure
>3ca9_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} Back     alignment and structure
>3tqz_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; purines, pyrimidines, nucleosides, nucleotides; 1.75A {Coxiella burnetii} Back     alignment and structure
>3mdx_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; metal-binding, nucleotide metabolism, structural genomics; 1.45A {Brucella melitensis} PDB: 3mbq_A Back     alignment and structure
>1euw_A Dutpase, deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, mercury derivative; 1.05A {Escherichia coli} SCOP: b.85.4.1 PDB: 1dud_A 1dup_A 1eu5_A 1rn8_A* 1seh_A* 2hr6_A* 2hrm_A* 1rnj_A* 1syl_A* Back     alignment and structure
>2xx6_A SPBC2 prophage-derived deoxyuridine 5'-triphospha nucleotidohydrolase YOSS; 1.74A {Bacillus subtilis} PDB: 2baz_A 2xy3_A* 2y1t_A* 2xcd_A 2xce_A* Back     alignment and structure
>3t64_A Deoxyuridine 5'-triphosphate nucleotidohydrolase,; hydrolase, DUTP binding, nucleus, hydrolase-hydrolase inhibi complex; HET: DU3; 1.65A {Plasmodium falciparum 3D7} PDB: 3t6y_A* 3t70_A* 3t60_A* 2y8c_A* 1vyq_A* Back     alignment and structure
>1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} SCOP: b.85.4.1 PDB: 1duc_A Back     alignment and structure
>1f7d_A POL polyprotein; eight stranded beta-barrel, viral protein, hydrolase; 1.40A {Feline immunodeficiency virus} SCOP: b.85.4.1 PDB: 1f7k_A* 1f7n_A* 1f7o_A 1f7p_A* 1f7q_A* 1f7r_A* 1dut_A Back     alignment and structure
>3h6x_A Dutpase; jelly-roll beta-barrel, hydrolase; 1.70A {Streptococcus mutans} Back     alignment and structure
>3tq5_A Deoxyuridine 5'-triphosphate nucleotido hydrolase; jelly roll; HET: UMP; 1.40A {Mason-pfizer monkey virus} PDB: 2d4m_A 2d4l_A* 3tp1_A* 3tpn_A* 3tps_A* 3tpw_A* 3tpy_A* 3tq3_A* 3tq4_A* 2d4n_A* 3trl_A* 3trn_A* 3ts6_A* 3tsl_A* 3tta_A* Back     alignment and structure
>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A* Back     alignment and structure
>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A* Back     alignment and structure
>2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis} PDB: 2qlp_A* Back     alignment and structure
>1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} SCOP: b.85.4.1 PDB: 2v9x_A* 1xs6_A* 1xs4_A* 2j4q_A* 2j4h_A* Back     alignment and structure
>4dhk_A DCTP deaminase, deoxycytidine triphosphate deaminase; hydrolase; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>3km3_A DCTP deaminase, deoxycytidine triphosphate deaminase; ssgcid, NIH, niaid, SBRI, UW, decode, deoxycytidine triphosp deaminase; 2.10A {Anaplasma phagocytophilum} Back     alignment and structure
>2yzj_A 167AA long hypothetical dutpase; all beta proteins, hypothetical protein, NPPSFA; HET: DUD; 1.66A {Sulfolobus tokodaii} PDB: 2zdc_A Back     alignment and structure
>1pkh_A Bifunctional deaminase/diphosphatase; DCTP deaminase, dutpase, DCD-DUT, MJ0430, DCTP, DUTP, hydrolase; 1.42A {Methanocaldococcus jannaschii} SCOP: b.85.4.1 PDB: 1ogh_A 1pkj_A* 1pkk_A* 2hxb_A 2hxe_A 3gf0_A 2hxd_A* Back     alignment and structure
>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genom MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} Back     alignment and structure
>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genom MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 219
d3ehwa1136 b.85.4.1 (A:24-159) Deoxyuridine 5'-triphosphate n 3e-40
d1sixa_153 b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleot 6e-38
d1f7da_118 b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleot 3e-33
d1euwa_136 b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleot 9e-32
d1vyqa1159 b.85.4.1 (A:1-159) Deoxyuridine 5'-triphosphate nu 1e-30
d1duna_120 b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleot 4e-28
d2bsya1113 b.85.4.1 (A:4-116) Monomeric viral dUTPase {Epstei 6e-28
d2bsya2136 b.85.4.1 (A:121-256) Monomeric viral dUTPase {Epst 5e-27
d1pkha_182 b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase 4e-12
d1xs1a_193 b.85.4.1 (A:) Deoxycytidine triphosphate deaminase 2e-09
>d3ehwa1 b.85.4.1 (A:24-159) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Human (Homo sapiens) [TaxId: 9606]} Length = 136 Back     information, alignment and structure

class: All beta proteins
fold: beta-clip
superfamily: dUTPase-like
family: dUTPase-like
domain: Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (333), Expect = 3e-40
 Identities = 82/134 (61%), Positives = 95/134 (70%)

Query: 82  LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPR 141
           LR  +LSE A  P RGS  AAGYDL SA +  +P   KA+V TD+ IA+P G Y R+APR
Sbjct: 3   LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 62

Query: 142 SGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEV 201
           SGLA KH +DVGAGVID DYRG VGV+LFN     F VK GDRIAQLI E+I  P++ EV
Sbjct: 63  SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 122

Query: 202 ENLDSTVRGEGGFG 215
           + LD T RG GGFG
Sbjct: 123 QALDDTERGSGGFG 136
>d1sixa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Mycobacterium tuberculosis, rv2697c [TaxId: 1773]} Length = 153 Back     information, alignment and structure
>d1f7da_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Feline immunodeficiency virus [TaxId: 11673]} Length = 118 Back     information, alignment and structure
>d1euwa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Escherichia coli [TaxId: 562]} Length = 136 Back     information, alignment and structure
>d1vyqa1 b.85.4.1 (A:1-159) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Plasmodium falciparum [TaxId: 5833]} Length = 159 Back     information, alignment and structure
>d1duna_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Equine infectious anemia virus [TaxId: 11665]} Length = 120 Back     information, alignment and structure
>d2bsya1 b.85.4.1 (A:4-116) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Length = 113 Back     information, alignment and structure
>d2bsya2 b.85.4.1 (A:121-256) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Length = 136 Back     information, alignment and structure
>d1pkha_ b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 182 Back     information, alignment and structure
>d1xs1a_ b.85.4.1 (A:) Deoxycytidine triphosphate deaminase (dCTP deaminase) {Escherichia coli [TaxId: 562]} Length = 193 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query219
d3ehwa1136 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 100.0
d1sixa_153 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 100.0
d1euwa_136 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 100.0
d1f7da_118 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 100.0
d1duna_120 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 100.0
d1vyqa1159 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 99.98
d2bsya2136 Monomeric viral dUTPase {Epstein-barr virus [TaxId 99.96
d2bsya1113 Monomeric viral dUTPase {Epstein-barr virus [TaxId 99.95
d1xs1a_193 Deoxycytidine triphosphate deaminase (dCTP deamina 99.76
d1pkha_182 Bifunctional dCTP deaminase/dUTPase {Archaeon Meth 99.7
>d3ehwa1 b.85.4.1 (A:24-159) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: beta-clip
superfamily: dUTPase-like
family: dUTPase-like
domain: Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-45  Score=293.74  Aligned_cols=135  Identities=61%  Similarity=0.938  Sum_probs=132.8

Q ss_pred             eEEEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCC
Q 027765           81 LLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDAD  160 (219)
Q Consensus        81 ~l~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsg  160 (219)
                      .++|+|++++|++|+|++++|||||||++++++|+|+++.+|+||++++||+||++++++|||++.|++|.+..|+||+|
T Consensus         2 ~~k~~kl~~~a~~P~r~t~~~AG~DL~~~ed~~i~p~~~~~i~tgi~~~ip~g~~~~i~~RSs~~~k~~l~~~~GvID~d   81 (136)
T d3ehwa1           2 QLRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVGAGVIDED   81 (136)
T ss_dssp             CEEEEESSTTCCCCEESSTTCSEEEEECSSCEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEECCEECTT
T ss_pred             EEEEEECCCCCCCcccCCCCCceEEEecCeeEEEEccceEEEECCcEEeecCCcEEEEeeeccccccceEEeCCEEEcCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999998999999999999


Q ss_pred             CccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCC
Q 027765          161 YRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFG  215 (219)
Q Consensus       161 YrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFG  215 (219)
                      |||||++.|+|++++++.|++|+||||||+.++..+++++|++|++|+||+||||
T Consensus        82 YrGei~v~l~N~~~~~~~i~~G~riaQlv~~~~~~~~~~~v~~l~~t~RG~gGFG  136 (136)
T d3ehwa1          82 YRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERGSGGFG  136 (136)
T ss_dssp             BCSCCEEEEEECSSSCEEECTTCEEEEEEEEEBCCCCEEECSCCCCCSSBTCCTT
T ss_pred             CCceEEEEEEeccccceEEecCCeEEEEEEccCCceEEEEecccCCCccCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999998
>d1sixa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Mycobacterium tuberculosis, rv2697c [TaxId: 1773]} Back     information, alignment and structure
>d1euwa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f7da_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Feline immunodeficiency virus [TaxId: 11673]} Back     information, alignment and structure
>d1duna_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure
>d1vyqa1 b.85.4.1 (A:1-159) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d2bsya2 b.85.4.1 (A:121-256) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Back     information, alignment and structure
>d2bsya1 b.85.4.1 (A:4-116) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Back     information, alignment and structure
>d1xs1a_ b.85.4.1 (A:) Deoxycytidine triphosphate deaminase (dCTP deaminase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pkha_ b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure