Citrus Sinensis ID: 027783

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccEccHHHEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcHccccHHHccccccc
Coil and Loop (DISEMBL)
MLKLWKWYQNclavhplktqvissgflwgvGDIAAQYITHATAKsrlqlsvtdadekFKVNWKRVAVTssfgfgfvgpvghfWYEGLDRFIRLklqlppksarFVATKVAmdsiifgplDLFVFFTYmgfstgknVAQVKEDLKrdflpalvleggiwpivqvanfryvpVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Flexible Loop (DISEMBL)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHsleerggkggl
Low Complexity Region (SEG)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVNWKRvavtssfgfgfvgpvghfWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Disordered region (IsUnstruct)
**KLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFH***********
Disordered Region (DISOPRED)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATA***********DEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLS*****************************
Disordered Region (DISEMBL)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLE********
Disordered Region (DISPRO)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKS*LQLSVTDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHS**********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	219	2.2.26 [Sep-21-2011]
Q54XX9	193	PXMP2/4 family protein 2	yes	no	0.831	0.943	0.324	6e-24
P19258	176	Protein Mpv17 OS=Mus musc	yes	no	0.799	0.994	0.329	5e-21
Q5BK62	176	Protein Mpv17 OS=Rattus n	yes	no	0.799	0.994	0.329	7e-21
Q66GV0	177	Protein Mpv17 OS=Xenopus	N/A	no	0.780	0.966	0.333	8e-21
Q5TZ51	177	Protein Mpv17 OS=Danio re	yes	no	0.785	0.971	0.345	1e-20
P39210	176	Protein Mpv17 OS=Homo sap	yes	no	0.780	0.971	0.336	1e-20
Q2KIN6	176	Protein Mpv17 OS=Bos taur	yes	no	0.780	0.971	0.336	5e-20
Q4IPX8	175	Protein SYM1 OS=Gibberell	yes	no	0.776	0.971	0.326	1e-19
Q7SCY7	172	Protein sym-1 OS=Neurospo	N/A	no	0.776	0.988	0.289	6e-19
Q54FR4	185	PXMP2/4 family protein 4	no	no	0.753	0.891	0.306	1e-18

>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1

 Score =  110 bits (275), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 15/197 (7%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKV 60
           M KLW  Y   L  HPL T+ +S+GFL G GDI AQ         RL+    D   +FK+
Sbjct: 1   MRKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQ---------RLEHKFKDEKSQFKL 51

Query: 61  NWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLD 120
           ++KRVA  S+ G  + GP+ H+WY  LD  ++       +    +  K+ +D ++F P+ 
Sbjct: 52  DYKRVATMSTVGIFYSGPMLHYWYRSLDIMVK------GEGRSVIIKKMLIDQLLFAPVA 105

Query: 121 LFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNI 180
           +  F T   F   K   +  E+  ++   A+ +   IWP  Q+ NF  VP   ++LY +I
Sbjct: 106 IGGFMTVTNFINNKGELKNLENFTKELFYAVKINWLIWPAAQIINFSLVPPNLRVLYSSI 165

Query: 181 FCLLDSAFLSWVEQQKD 197
             +    FLS +   KD
Sbjct: 166 ISIFWGMFLSHISFDKD 182

Dictyostelium discoideum (taxid: 44689)

>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1

 Score =  101 bits (251), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 90/194 (46%), Gaps = 19/194 (9%)

Query: 2   LKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVN 61
           + LW+ YQ  LA HP K QV+++G L GVGD+ +Q +       + Q             
Sbjct: 1   MALWRAYQRALAAHPWKVQVLTAGSLMGVGDMISQQLVERRGLQQHQAG----------- 49

Query: 62  WKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDL 121
             R     S G GFVGPV   WY+ LD  I      P  +      K+ +D   F P  L
Sbjct: 50  --RTLTMVSLGCGFVGPVVGGWYKVLDHLI------PGTTKVHALKKMLLDQGGFAPCFL 101

Query: 122 FVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIF 181
             F   +G   G +       LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V   
Sbjct: 102 GCFLPLVGILNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCV 161

Query: 182 CLLDSAFLSWVEQQ 195
            ++ +++LSW   Q
Sbjct: 162 AIVWNSYLSWKAHQ 175

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Mus musculus (taxid: 10090)

>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1

 Score =  100 bits (249), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 90/194 (46%), Gaps = 19/194 (9%)

Query: 2   LKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVN 61
           + LW+ YQ  LA HP K QV+++G L G+GDI +Q +       + Q             
Sbjct: 1   MALWRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTG----------- 49

Query: 62  WKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDL 121
             R    +S G GFVGPV   WY  LD  I      P  +      K+ +D   F P  L
Sbjct: 50  --RTLTMASLGCGFVGPVVGGWYRVLDHLI------PGTTKVNALKKMLLDQGGFAPCFL 101

Query: 122 FVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIF 181
             F   +G   G +       LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V   
Sbjct: 102 GCFLPLVGVLNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCV 161

Query: 182 CLLDSAFLSWVEQQ 195
            ++ +++LSW   Q
Sbjct: 162 AVVWNSYLSWKAHQ 175

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Rattus norvegicus (taxid: 10116)

>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2

 Score =  100 bits (249), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 94/192 (48%), Gaps = 21/192 (10%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKV 60
           M  LW+ YQ  L  HP K Q++++G L GVGD+ +Q +          +           
Sbjct: 1   MAGLWRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLERKGLKGHSI----------- 49

Query: 61  NWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVA-TKVAMDSIIFGPL 119
             +R       GF FVGPV   WY+ LDR I       P S + VA  K+ +D + F P 
Sbjct: 50  --ERTVKMMGIGFCFVGPVVGGWYKILDRII-------PGSGKPVALKKMLLDQVAFAPC 100

Query: 120 DLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVN 179
            L  F +      G +  Q+   LKRD+  AL+    IWP VQVANF ++P+ ++L  V 
Sbjct: 101 FLGCFLSIASALNGLSGEQIWGKLKRDYKDALITNYYIWPAVQVANFYFIPLYHRLAVVQ 160

Query: 180 IFCLLDSAFLSW 191
              ++ +++LSW
Sbjct: 161 FVAIIWNSYLSW 172

Involved in mitochondria homeostasis.

Xenopus laevis (taxid: 8355)

>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1

 Score =  100 bits (248), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 99/191 (51%), Gaps = 19/191 (9%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKV 60
           M  LW+ YQ  +A HP K Q+I++G L GVGD+ +Q +       R  L+  +A      
Sbjct: 1   MAGLWRSYQALMAKHPWKVQIITAGSLVGVGDVISQQLIE-----RRGLANHNA------ 49

Query: 61  NWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLD 120
             +R A   S GF FVGPV   WY+ LD+ +        KSA     K+ +D + F P  
Sbjct: 50  --RRTAKMMSIGFFFVGPVVGGWYKVLDKLVTGG----TKSAAL--KKMLVDQVGFAPCF 101

Query: 121 LFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNI 180
           L  F    G   G  V +    L+RD+  AL+    +WP VQ+ANF ++P+ ++L  V I
Sbjct: 102 LGAFLGITGTLNGLTVEENVAKLQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQI 161

Query: 181 FCLLDSAFLSW 191
             ++ +++LSW
Sbjct: 162 VAVVWNSYLSW 172

Involved in mitochondria homeostasis.

Danio rerio (taxid: 7955)

>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1

 Score = 99.8 bits (247), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 19/190 (10%)

Query: 2   LKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVN 61
           + LW+ YQ  LA HP K QV+++G L G+GDI +Q +         Q             
Sbjct: 1   MALWRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRG----------- 49

Query: 62  WKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDL 121
             R     S G GFVGPV   WY+ LDRFI      P  +      K+ +D   F P  L
Sbjct: 50  --RTLTMVSLGCGFVGPVVGGWYKVLDRFI------PGTTKVDALKKMLLDQGGFAPCFL 101

Query: 122 FVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIF 181
             F   +G   G +       L+RD+  AL+    +WP VQ+ANF  VP+ Y+L  V   
Sbjct: 102 GCFLPLVGALNGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCV 161

Query: 182 CLLDSAFLSW 191
            ++ +++LSW
Sbjct: 162 AVIWNSYLSW 171

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Homo sapiens (taxid: 9606)

>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1

 Score = 97.8 bits (242), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 19/190 (10%)

Query: 2   LKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVN 61
           + LW+ YQ  L  HP K QV+++G L G+GD+ +Q +       R  L    A       
Sbjct: 1   MALWRAYQRALTAHPWKVQVLTAGSLMGLGDVISQQLVE-----RRGLQAHQAG------ 49

Query: 62  WKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDL 121
             R    +S G GFVGPV   WY  LDR I      P  +      K+ +D   F P  L
Sbjct: 50  --RTLTMASLGCGFVGPVVGGWYRVLDRLI------PGTTKVDALKKMLLDQGGFAPCFL 101

Query: 122 FVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIF 181
             F   +G   G +       L+RDF  AL+    +WP VQ+ANF  VP+ Y+L  V   
Sbjct: 102 GCFLPLVGTLNGLSAQDNWAKLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCV 161

Query: 182 CLLDSAFLSW 191
            ++ +++LSW
Sbjct: 162 AVIWNSYLSW 171

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Bos taurus (taxid: 9913)

>sp|Q4IPX8|SYM1_GIBZE Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SYM1 PE=3 SV=1

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 20/190 (10%)

Query: 6   KWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVNWKRV 65
           +WY + LA  PL TQ +++ FL+  GD+ AQ +       +  L  T           R+
Sbjct: 6   RWYNSRLAARPLLTQSVTTAFLFATGDVTAQQLVEKRGAQKHDLVRTG----------RM 55

Query: 66  AVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFF 125
           A+   F FG   PV   W+  L R + ++     K A  +A +VA D + F P+ + VF 
Sbjct: 56  ALYGGFVFG---PVATTWFAFLARRVNVRNN---KKAEVLA-RVACDQLGFAPVMIGVFL 108

Query: 126 TYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLD 185
           + M    GK+V   KE + + + PAL     +WP VQV NF  +P++Y+L + NI  +  
Sbjct: 109 SSMATMEGKSV---KERIDKTWWPALKANWMVWPAVQVINFSLIPLQYRLFFANIIAIGW 165

Query: 186 SAFLSWVEQQ 195
           +++LSWV  Q
Sbjct: 166 NSYLSWVNSQ 175

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2

 Score = 94.4 bits (233), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 20/190 (10%)

Query: 6   KWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVNWKRV 65
            WY+  LA  PL TQ +++  L+GVGD+AAQ +      S   L+             R 
Sbjct: 3   SWYKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLT-------------RT 49

Query: 66  AVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFF 125
                +G    GP    W+    RF++ ++ +P  + + +  +VA D  +F P  + +F 
Sbjct: 50  GRMVLYGGAVFGPAATTWF----RFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIFL 105

Query: 126 TYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLD 185
             M    G +V   KE L++++  AL     +WP VQ+ NF+ VP+ +++L+VN+  +  
Sbjct: 106 GSMAVLEGTDV---KEKLQKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGW 162

Query: 186 SAFLSWVEQQ 195
           + +LSW+  Q
Sbjct: 163 NCYLSWLNGQ 172

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1

 Score = 93.2 bits (230), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 18/183 (9%)

Query: 8   YQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKVNWKRVAV 67
           Y + L  +P+ T+ ++SGFL+ + D   Q I         +LS  D D+K+  ++KR   
Sbjct: 15  YLSQLHKYPVATKAVTSGFLYLISDSLVQGI---------ELS-RDKDKKY--DFKRSMR 62

Query: 68  TSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTY 127
            + FGF   GP+ H+W++ LD+        P KS R    K+ +D ++  P+  F+FF+ 
Sbjct: 63  MAVFGFAVTGPLFHYWFKYLDK------HFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSG 116

Query: 128 MGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSA 187
           MG   GK+   + E LK+D+L   V +  +WP +   NF Y+   +++ ++N+  +   A
Sbjct: 117 MGILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGWGA 176

Query: 188 FLS 190
           FL+
Sbjct: 177 FLA 179

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	219
297835548	225	hypothetical protein ARALYDRAFT_479971 [	1.0	0.973	0.782	5e-99
224143550	232	predicted protein [Populus trichocarpa]	0.986	0.931	0.744	2e-97
110737868	235	hypothetical protein [Arabidopsis thalia	1.0	0.931	0.744	4e-97
38454114	235	At3g24570 [Arabidopsis thaliana] gi|4134	1.0	0.931	0.740	7e-97
15230132	235	Peroxisomal membrane 22 kDa (Mpv17/PMP22	1.0	0.931	0.740	9e-97
225430031	218	PREDICTED: protein Mpv17 [Vitis vinifera	0.986	0.990	0.761	2e-95
147812172	218	hypothetical protein VITISV_033965 [Viti	0.986	0.990	0.761	2e-95
225445224	217	PREDICTED: protein Mpv17 [Vitis vinifera	0.986	0.995	0.747	3e-94
449443149	212	PREDICTED: PXMP2/4 family protein 2-like	0.968	1.0	0.751	4e-93
255546469	224	mpv17, putative [Ricinus communis] gi|22	0.990	0.968	0.713	7e-93

>gi|297835548|ref|XP_002885656.1| hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata] gi|297331496|gb|EFH61915.1| hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata]

 Score =  365 bits (938), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 176/225 (78%), Positives = 199/225 (88%), Gaps = 6/225 (2%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRL-QLSVT----DAD 55
           MLKLW+WYQ CL VHP+KTQVISSGFLWG GD+ AQYITH+TAK RL +L+ T    DAD
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKPRLLRLTETNKDADAD 60

Query: 56  EKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSII 115
            +FKVNWKRVA+TS FGFGFVGPVGHFWYEGLD+FI+LKL+  PKS RFVA KVAMD +I
Sbjct: 61  AEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLI 120

Query: 116 FGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQL 175
           FGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+ANFRYVPV+YQL
Sbjct: 121 FGPIDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQL 180

Query: 176 LYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 219
           LYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 181 LYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 225

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143550|ref|XP_002324994.1| predicted protein [Populus trichocarpa] gi|222866428|gb|EEF03559.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (924), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 172/231 (74%), Positives = 192/231 (83%), Gaps = 15/231 (6%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVT-------- 52
           MLK WKWYQ+CL+ HP+KTQ++SSG LWG+GDI AQYITH+TA S L  SVT        
Sbjct: 1   MLKAWKWYQHCLSSHPVKTQIVSSGTLWGIGDIGAQYITHSTATSLLPKSVTSLRIGDLL 60

Query: 53  -------DADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFV 105
                  +   +FK+NWKRVA+TS FGFGFVGPVGHFWYEGLDRFIRL+  L PKS RFV
Sbjct: 61  LVIYFKNNEGAEFKINWKRVAITSMFGFGFVGPVGHFWYEGLDRFIRLRFLLQPKSPRFV 120

Query: 106 ATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVAN 165
           ATKVA D IIFGP DLFVFFTYMGFSTGKNVAQVKED+KRDFLPAL+LEGG+WPI QV N
Sbjct: 121 ATKVAADGIIFGPFDLFVFFTYMGFSTGKNVAQVKEDVKRDFLPALILEGGVWPIFQVVN 180

Query: 166 FRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGK 216
           FRYVPVRYQLLYVN+FCL+DSAFLSW+EQQKDA WKQWFTSF  L+ERGG+
Sbjct: 181 FRYVPVRYQLLYVNVFCLIDSAFLSWIEQQKDAPWKQWFTSFQPLKERGGE 231

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110737868|dbj|BAF00872.1| hypothetical protein [Arabidopsis thaliana]

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 175/235 (74%), Positives = 198/235 (84%), Gaps = 16/235 (6%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRL-QLSVTDADE--- 56
           MLKLW+WYQ CL VHP+KTQVISSGFLWG GD+ AQYITH+TAK RL +L+ T+ D    
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query: 57  -----------KFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFV 105
                      +FKVNWKRVA+TS FGFGFVGPVGHFWYEGLDRFI+LKL+  PKS RFV
Sbjct: 61  AEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDRFIKLKLRYVPKSTRFV 120

Query: 106 ATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVAN 165
           A KVAMD +IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+AN
Sbjct: 121 AAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIAN 180

Query: 166 FRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 219
           FRYVPV+YQLLYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 181 FRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|38454114|gb|AAR20751.1| At3g24570 [Arabidopsis thaliana] gi|41349920|gb|AAS00345.1| At3g24570 [Arabidopsis thaliana]

 Score =  358 bits (920), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 174/235 (74%), Positives = 198/235 (84%), Gaps = 16/235 (6%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRL-QLSVTDADE--- 56
           MLKLW+WYQ CL VHP+KTQVISSGFLWG GD+ AQYITH+TAK RL +L+ T+ D    
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query: 57  -----------KFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFV 105
                      +FKVNWKRVA+TS FGFGFVGPVGHFWYEGLD+FI+LKL+  PKS RFV
Sbjct: 61  TEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFV 120

Query: 106 ATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVAN 165
           A KVAMD +IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+AN
Sbjct: 121 AAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIAN 180

Query: 166 FRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 219
           FRYVPV+YQLLYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 181 FRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15230132|ref|NP_189100.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] gi|9294052|dbj|BAB02009.1| unnamed protein product [Arabidopsis thaliana] gi|332643403|gb|AEE76924.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]

 Score =  358 bits (919), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 174/235 (74%), Positives = 198/235 (84%), Gaps = 16/235 (6%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRL-QLSVTDADE--- 56
           MLKLW+WYQ CL VHP+KTQVISSGFLWG GD+ AQYITH+TAK RL +L+ T+ D    
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query: 57  -----------KFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFV 105
                      +FKVNWKRVA+TS FGFGFVGPVGHFWYEGLD+FI+LKL+  PKS RFV
Sbjct: 61  AEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFV 120

Query: 106 ATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVAN 165
           A KVAMD +IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+AN
Sbjct: 121 AAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIAN 180

Query: 166 FRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 219
           FRYVPV+YQLLYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 181 FRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430031|ref|XP_002284227.1| PREDICTED: protein Mpv17 [Vitis vinifera] gi|296081890|emb|CBI20895.3| unnamed protein product [Vitis vinifera]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 166/218 (76%), Positives = 191/218 (87%), Gaps = 2/218 (0%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKV 60
           +L+LWKWYQ+CLAVHP+KTQ+ISSG +WG GDI AQ ITH TAK   Q+   D D++ K+
Sbjct: 3   LLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTAKRHHQIG--DEDKELKI 60

Query: 61  NWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLD 120
           NW+RVA TS FGFGFVGPVGHFWYEGLDR IR +LQL PKS RFVA KVA+D IIFGPLD
Sbjct: 61  NWRRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAIDGIIFGPLD 120

Query: 121 LFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNI 180
           L VFF+YMGFSTGK+VAQVKED+KRDFLPAL+LEGGIWPIVQV NFR++PVRYQLLYVN 
Sbjct: 121 LLVFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVRYQLLYVNF 180

Query: 181 FCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGG 218
           FCLLDS+FLSWVEQQ+DA WKQWFTSF +L+E+ G+GG
Sbjct: 181 FCLLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147812172|emb|CAN61516.1| hypothetical protein VITISV_033965 [Vitis vinifera]

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 166/218 (76%), Positives = 191/218 (87%), Gaps = 2/218 (0%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKV 60
           +L+LWKWYQ+CLAVHP+KTQ+ISSG +WG GDI AQ ITH TAK   Q+   D D++ K+
Sbjct: 3   LLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTAKRXHQIG--DEDKELKI 60

Query: 61  NWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLD 120
           NW+RVA TS FGFGFVGPVGHFWYEGLDR IR +LQL PKS RFVA KVA+D IIFGPLD
Sbjct: 61  NWRRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAIDGIIFGPLD 120

Query: 121 LFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNI 180
           L VFF+YMGFSTGK+VAQVKED+KRDFLPAL+LEGGIWPIVQV NFR++PVRYQLLYVN 
Sbjct: 121 LLVFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVRYQLLYVNF 180

Query: 181 FCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGG 218
           FCLLDS+FLSWVEQQ+DA WKQWFTSF +L+E+ G+GG
Sbjct: 181 FCLLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445224|ref|XP_002284391.1| PREDICTED: protein Mpv17 [Vitis vinifera] gi|297738820|emb|CBI28065.3| unnamed protein product [Vitis vinifera]

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 163/218 (74%), Positives = 189/218 (86%), Gaps = 2/218 (0%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKV 60
           ML  WKWYQ C+++HP+KTQVISSG LWGVGDI AQ ITH++A+ RLQ+S  DA + FK+
Sbjct: 1   MLNAWKWYQRCMSLHPVKTQVISSGILWGVGDITAQSITHSSARKRLQIS--DAGQDFKI 58

Query: 61  NWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLD 120
           +WKR A+TS FGFGFVGPVGHFWYEGLDRFIRL+L L P S RFVA+KVAMDS+IFGP +
Sbjct: 59  DWKRTAITSMFGFGFVGPVGHFWYEGLDRFIRLRLLLQPASVRFVASKVAMDSLIFGPFE 118

Query: 121 LFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNI 180
           LFVFF++MGFSTGKN AQVKEDLKRDFLPAL++E G WP VQV NFRYVPVRYQLLYVN+
Sbjct: 119 LFVFFSHMGFSTGKNAAQVKEDLKRDFLPALIVESGAWPFVQVVNFRYVPVRYQLLYVNL 178

Query: 181 FCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGG 218
           FCLLDS FLSW+EQQKDA+WKQWF+S  S +E+G  GG
Sbjct: 179 FCLLDSIFLSWMEQQKDASWKQWFSSSPSSKEQGHGGG 216

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443149|ref|XP_004139343.1| PREDICTED: PXMP2/4 family protein 2-like [Cucumis sativus] gi|449516296|ref|XP_004165183.1| PREDICTED: PXMP2/4 family protein 2-like [Cucumis sativus]

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 160/213 (75%), Positives = 183/213 (85%), Gaps = 1/213 (0%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKV 60
           M +LWKWYQNCL  HP+KTQVISSGFLWG GDIAAQYITH+  K+ L  S +DA E+FK+
Sbjct: 1   MFRLWKWYQNCLTFHPVKTQVISSGFLWGTGDIAAQYITHSATKTHLPTS-SDAVEEFKI 59

Query: 61  NWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLD 120
           NWKRV +TS FGFGFVGPVGH WYEGLDRFIRLKLQL PKSA+FV  K+AMD +IFGP+D
Sbjct: 60  NWKRVGITSMFGFGFVGPVGHMWYEGLDRFIRLKLQLQPKSAKFVGAKLAMDGLIFGPID 119

Query: 121 LFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNI 180
           L  FF+YMGF+ GK+VA+VKEDLKRD LPA +L G +WPI+QVANFRYVPVRYQLLYVN+
Sbjct: 120 LVFFFSYMGFANGKDVAEVKEDLKRDVLPAFILSGTVWPIIQVANFRYVPVRYQLLYVNM 179

Query: 181 FCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEER 213
           FCLLDSAFLSW EQQ DA WKQWFTSF+  ++R
Sbjct: 180 FCLLDSAFLSWFEQQNDAPWKQWFTSFNPFKDR 212

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546469|ref|XP_002514294.1| mpv17, putative [Ricinus communis] gi|223546750|gb|EEF48248.1| mpv17, putative [Ricinus communis]

 Score =  345 bits (885), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 157/220 (71%), Positives = 187/220 (85%), Gaps = 3/220 (1%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVT---DADEK 57
           MLKLWKWYQ CL+ HP+KTQ++SSGFLW +GDI AQYITH+TA S +  S     DA+ +
Sbjct: 1   MLKLWKWYQQCLSTHPVKTQIVSSGFLWSIGDIGAQYITHSTAVSLILFSNVLEQDAEAE 60

Query: 58  FKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFG 117
           FK+NWKRVA+T  FGFGF+GP+GH+WYEGLD+ +RL+ QLPPKS RFVA KVA D++IF 
Sbjct: 61  FKINWKRVAITGLFGFGFIGPLGHYWYEGLDKIMRLRFQLPPKSLRFVAAKVAADTLIFA 120

Query: 118 PLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLY 177
           P DLFVFFTYMG ++GK+VAQVKED++RDFLPA+++EG IWPIVQVANFRYVPVR+QLLY
Sbjct: 121 PFDLFVFFTYMGLASGKSVAQVKEDVRRDFLPAMIMEGSIWPIVQVANFRYVPVRHQLLY 180

Query: 178 VNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKG 217
           VN FCLLDSAFLSW EQQ DA WKQWFTS   L+ER G+G
Sbjct: 181 VNTFCLLDSAFLSWFEQQNDAPWKQWFTSVKPLKEREGQG 220

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	219
TAIR|locus:2091767	235	AT3G24570 "AT3G24570" [Arabido	1.0	0.931	0.680	1.7e-82
UNIPROTKB|P39210	176	MPV17 "Protein Mpv17" [Homo sa	0.465	0.579	0.336	2.4e-19
MGI|MGI:97138	176	Mpv17 "MpV17 mitochondrial inn	0.488	0.607	0.318	2.4e-19
ZFIN|ZDB-GENE-040426-1168	177	mpv17 "MpV17 transgene, murine	0.470	0.581	0.321	3.9e-19
UNIPROTKB|J9P9X6	176	MPV17 "Uncharacterized protein	0.465	0.579	0.336	8.1e-19
RGD|1310512	176	Mpv17 "MpV17 mitochondrial inn	0.484	0.602	0.324	8.1e-19
UNIPROTKB|Q5BK62	176	Mpv17 "Protein Mpv17" [Rattus	0.484	0.602	0.324	8.1e-19
UNIPROTKB|Q2KIN6	176	MPV17 "Protein Mpv17" [Bos tau	0.465	0.579	0.336	2.1e-18
DICTYBASE|DDB_G0278529	193	DDB_G0278529 "pmp22 family pro	0.831	0.943	0.289	2.8e-18
UNIPROTKB|E7EX18	191	MPV17 "Protein Mpv17" [Homo sa	0.465	0.534	0.336	1.4e-15

TAIR|locus:2091767 AT3G24570 "AT3G24570" [Arabidopsis thaliana (taxid:3702)]

 Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
 Identities = 160/235 (68%), Positives = 182/235 (77%)

Query:     1 MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRL-QLSVT--DADE- 56
             MLKLW+WYQ CL VHP+KTQVISSGFLWG GD+ AQYITH+TAK RL +L+ T  DAD  
Sbjct:     1 MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query:    57 -----------KFKVNWKRXXXXXXXXXXXXXXXXXXWYEGLDRFIRLKLQLPPKSARFV 105
                        +FKVNWKR                  WYEGLD+FI+LKL+  PKS RFV
Sbjct:    61 AEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFV 120

Query:   106 ATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVAN 165
             A KVAMD +IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+AN
Sbjct:   121 AAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIAN 180

Query:   166 FRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTS-FHSLEERGGKGGL 219
             FRYVPV+YQLLYVNIFCL+DSAFLSWVEQQKDAAWKQWFTS F  L+ERGG+GG+
Sbjct:   181 FRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P39210 MPV17 "Protein Mpv17" [Homo sapiens (taxid:9606)]

 Score = 143 (55.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
 Identities = 37/110 (33%), Positives = 56/110 (50%)

Query:    83 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 141
             WY+ LDRFI       P + +  A K + +D   F P  L  F   +G   G +      
Sbjct:    69 WYKVLDRFI-------PGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWA 121

Query:   142 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 191
              L+RD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW
Sbjct:   122 KLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSW 171

GO:0016021 "integral to membrane" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA

GO:0000002 "mitochondrial genome maintenance" evidence=IMP

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

GO:0042592 "homeostatic process" evidence=IMP

GO:0032836 "glomerular basement membrane development" evidence=ISS

GO:0034614 "cellular response to reactive oxygen species" evidence=ISS

GO:0048839 "inner ear development" evidence=ISS

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=ISS

GO:0005777 "peroxisome" evidence=NAS;IDA

GO:0005739 "mitochondrion" evidence=IDA

MGI|MGI:97138 Mpv17 "MpV17 mitochondrial inner membrane protein" [Mus musculus (taxid:10090)]

 Score = 143 (55.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
 Identities = 36/113 (31%), Positives = 53/113 (46%)

Query:    83 WYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKED 142
             WY+ LD  I      P  +      K+ +D   F P  L  F   +G   G +       
Sbjct:    69 WYKVLDHLI------PGTTKVHALKKMLLDQGGFAPCFLGCFLPLVGILNGMSAQDNWAK 122

Query:   143 LKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQ 195
             LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW   Q
Sbjct:   123 LKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAIVWNSYLSWKAHQ 175

GO:0000002 "mitochondrial genome maintenance" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA;IMP

GO:0005743 "mitochondrial inner membrane" evidence=ISO

GO:0005777 "peroxisome" evidence=IDA

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IMP

GO:0034614 "cellular response to reactive oxygen species" evidence=IMP

GO:0042592 "homeostatic process" evidence=ISO

GO:0048839 "inner ear development" evidence=IMP

GO:0072593 "reactive oxygen species metabolic process" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

ZFIN|ZDB-GENE-040426-1168 mpv17 "MpV17 transgene, murine homolog, glomerulosclerosis" [Danio rerio (taxid:7955)]

 Score = 146 (56.5 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
 Identities = 35/109 (32%), Positives = 57/109 (52%)

Query:    83 WYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKED 142
             WY+ LD+ +        KSA     K+ +D + F P  L  F    G   G  V +    
Sbjct:    70 WYKVLDKLVTGGT----KSAAL--KKMLVDQVGFAPCFLGAFLGITGTLNGLTVEENVAK 123

Query:   143 LKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 191
             L+RD+  AL+    +WP VQ+ANF ++P+ ++L  V I  ++ +++LSW
Sbjct:   124 LQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLSW 172

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

UNIPROTKB|J9P9X6 MPV17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 138 (53.6 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
 Identities = 37/110 (33%), Positives = 55/110 (50%)

Query:    83 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 141
             WY  LDR I       P +A+  A K + +D   F P  L  F   +G   G +      
Sbjct:    69 WYRVLDRLI-------PGTAKADALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWA 121

Query:   142 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 191
              L+RD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW
Sbjct:   122 KLRRDYPDALLTNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSW 171

GO:0016021 "integral to membrane" evidence=IEA

RGD|1310512 Mpv17 "MpV17 mitochondrial inner membrane protein" [Rattus norvegicus (taxid:10116)]

 Score = 138 (53.6 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
 Identities = 37/114 (32%), Positives = 54/114 (47%)

Query:    83 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 141
             WY  LD  I       P + +  A K + +D   F P  L  F   +G   G +      
Sbjct:    69 WYRVLDHLI-------PGTTKVNALKKMLLDQGGFAPCFLGCFLPLVGVLNGMSAQDNWA 121

Query:   142 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQ 195
              LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW   Q
Sbjct:   122 KLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSWKAHQ 175

GO:0000002 "mitochondrial genome maintenance" evidence=IEA;ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0005777 "peroxisome" evidence=IEA;ISO

GO:0007605 "sensory perception of sound" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA;ISO

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA;ISO

GO:0042592 "homeostatic process" evidence=IEA;ISO

GO:0048839 "inner ear development" evidence=IEA;ISO

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA;ISO

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA;ISO

UNIPROTKB|Q5BK62 Mpv17 "Protein Mpv17" [Rattus norvegicus (taxid:10116)]

 Score = 138 (53.6 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
 Identities = 37/114 (32%), Positives = 54/114 (47%)

Query:    83 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 141
             WY  LD  I       P + +  A K + +D   F P  L  F   +G   G +      
Sbjct:    69 WYRVLDHLI-------PGTTKVNALKKMLLDQGGFAPCFLGCFLPLVGVLNGMSAQDNWA 121

Query:   142 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQ 195
              LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW   Q
Sbjct:   122 KLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSWKAHQ 175

GO:0000002 "mitochondrial genome maintenance" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA

GO:0042592 "homeostatic process" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA

UNIPROTKB|Q2KIN6 MPV17 "Protein Mpv17" [Bos taurus (taxid:9913)]

 Score = 139 (54.0 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
 Identities = 37/110 (33%), Positives = 54/110 (49%)

Query:    83 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 141
             WY  LDR I       P + +  A K + +D   F P  L  F   +G   G +      
Sbjct:    69 WYRVLDRLI-------PGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGTLNGLSAQDNWA 121

Query:   142 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 191
              L+RDF  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW
Sbjct:   122 KLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSW 171

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0042592 "homeostatic process" evidence=IEA

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0000002 "mitochondrial genome maintenance" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0278529 DDB_G0278529 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 57/197 (28%), Positives = 87/197 (44%)

Query:     1 MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSVTDADEKFKV 60
             M KLW  Y   L  HPL T+ +S+GFL G GDI AQ         RL+    D   +FK+
Sbjct:     1 MRKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQ---------RLEHKFKDEKSQFKL 51

Query:    61 NWKRXXXXXXXXXXXXXXXXXXWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLD 120
             ++KR                  WY  LD  ++       +    +  K+ +D ++F P+ 
Sbjct:    52 DYKRVATMSTVGIFYSGPMLHYWYRSLDIMVK------GEGRSVIIKKMLIDQLLFAPVA 105

Query:   121 LFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNI 180
             +  F T   F   K   +  E+  ++   A+ +   IWP  Q+ NF  VP   ++LY +I
Sbjct:   106 IGGFMTVTNFINNKGELKNLENFTKELFYAVKINWLIWPAAQIINFSLVPPNLRVLYSSI 165

Query:   181 FCLLDSAFLSWVEQQKD 197
               +    FLS +   KD
Sbjct:   166 ISIFWGMFLSHISFDKD 182

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E7EX18 MPV17 "Protein Mpv17" [Homo sapiens (taxid:9606)]

 Score = 143 (55.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
 Identities = 37/110 (33%), Positives = 56/110 (50%)

Query:    83 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 141
             WY+ LDRFI       P + +  A K + +D   F P  L  F   +G   G +      
Sbjct:    84 WYKVLDRFI-------PGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWA 136

Query:   142 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 191
              L+RD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW
Sbjct:   137 KLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSW 186

GO:0016021 "integral to membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q54XX9	PX24B_DICDI	No assigned EC number	0.3248	0.8310	0.9430	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	219
pfam04117	68	pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family	1e-16

>gnl|CDD|202894 pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family

 Score = 71.1 bits (175), Expect = 1e-16
 Identities = 27/68 (39%), Positives = 42/68 (61%)

Query: 128 MGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSA 187
           MG   GK++ ++KE LK  F P L     +WP VQ  NF +VPV Y++L+VN+  +  + 
Sbjct: 1   MGLLEGKSLEEIKEKLKEKFWPTLKANWKVWPPVQFINFAFVPVHYRVLFVNLVGIGWNT 60

Query: 188 FLSWVEQQ 195
           +LS+V  +
Sbjct: 61  YLSYVNNK 68

The 22-kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information. Mpv17 is a closely related peroxisomal protein. In mouse, the Mpv17 protein is involved in the development of early-onset glomerulosclerosis. More recently a homolog of Mpv17 in S. cerevisiae has been been found to be an integral membrane protein of the inner mitochondrial membrane where it has been proposed to have a role in ethanol metabolism and tolerance during heat-shock. Defects in MPV17 is associated with mitochondrial DNA depletion syndrome (MDDS) and Navajo neurohepatopathy (NNH). MDDS is a clinically heterogeneous group of disorders characterized by a reduction in mitochondrial DNA (mtDNA) copy number. Primary mtDNA depletion is inherited as an autosomal recessive trait and may affect single organs, typically muscle or liver, or multiple tissues. Individuals with the hepatocerebral form of mitochondrial DNA depletion syndrome have early progressive liver failure and neurologic abnormalities, hypoglycemia, and increased lactate in body fluids. NNH is an autosomal recessive disease that is prevalent among Navajo children in the South Western states of America. The major clinical features are hepatopathy, peripheral neuropathy, corneal anesthesia and scarring, acral mutilation, cerebral leukoencephalopathy, failure to thrive, and recurrent metabolic acidosis with intercurrent infections. Infantile, childhood, and classic forms of NNH have been described. Mitochondrial DNA depletion was detected in the livers of patients, suggesting a primary defect in mtDNA maintenance. Length = 68

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	219
KOG1944	222	consensus Peroxisomal membrane protein MPV17 and r	100.0
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	99.92

>KOG1944 consensus Peroxisomal membrane protein MPV17 and related proteins [General function prediction only]

Probab=100.00  E-value=7.1e-42  Score=285.27  Aligned_cols=168  Identities=36%  Similarity=0.650  Sum_probs=157.9

Q ss_pred             HhhCchHHHHHHHHHHH-HHHHHHHhchhhhhhhhhhhcccccccccccchHHHHHHHHHhcccccchhHHHHHHHHHHH
Q 027783           12 LAVHPLKTQVISSGFLW-GVGDIAAQYITHATAKSRLQLSVTDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRF   90 (219)
Q Consensus        12 l~~~Pl~tk~~ts~~l~-~~gD~laQ~~~~~~~~~~~~~~~~~~~~~~~~D~~Rt~~~~~~G~~~~gP~~h~wy~~Ld~~   90 (219)
                      ...+|+++++++++.+. .+||+++|.++..++.          . ..++|+.|++||+++|+++.||.+|+||..||++
T Consensus        46 ~~~~~~l~~~i~~~~~~~~~~d~~~q~~~~~~~~----------~-~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~  114 (222)
T KOG1944|consen   46 FSLYPLLTKAITTSLLLAAAGDVISQSLEGRSKK----------L-FQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKL  114 (222)
T ss_pred             hhhhhHHHHHHHHHHHHHHhchhhhhhhhhhccc----------c-cccccHHHHHHHHhhhhheeccchhHHHHHHHHH
Confidence            35688888999888888 9999999999987531          0 4689999999999999989999999999999999


Q ss_pred             hhhhcCCCCCcHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhCCCChHHHHHHHHHhhHHHHHhccccchHhhhhheeeec
Q 027783           91 IRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVP  170 (219)
Q Consensus        91 ~~~~~~~~~~~~~~v~~Kvl~DQ~v~aP~~~~~f~~~~~~leg~s~~~~~~~lk~~~~~~l~~~~~vWp~~q~inF~~vP  170 (219)
                      +|      .++..++++|+++||++++|+.+.+||.+|+++||++.+++.+++++++||++++||++||++|++||++||
T Consensus       115 ~p------~~~~~~~~~kvl~dql~~~P~~~~~ff~~~~~legk~~~~~~~~~~~~~~p~l~~~~~~WP~~q~inF~~VP  188 (222)
T KOG1944|consen  115 FP------KKTLITVVKKVLLDQLVFAPLFIVVFFLLMGLLEGKTNEEAKAKLKRKFWPTLKANWMVWPLVQFINFRLVP  188 (222)
T ss_pred             cc------CccHHHHHHHHHHhhhhhchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhhheecchhheeeeEEcc
Confidence            96      568899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccchhhhhHHHHHHHHHHHhhhccc
Q 027783          171 VRYQLLYVNIFCLLDSAFLSWVEQQK  196 (219)
Q Consensus       171 ~~~Rvlf~n~v~~~W~~yLS~~~~~~  196 (219)
                      +++|++++|+++++||+|||+++++.
T Consensus       189 ~~~rvl~~~~vsl~W~~~Ls~~~~~~  214 (222)
T KOG1944|consen  189 LQYRVLFVNIVSLVWNTYLSYKNASL  214 (222)
T ss_pred             ccceehhhhhHHHHHHHHHHHHhhcc
Confidence            99999999999999999999999998

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=99.92  E-value=6.1e-26  Score=155.98  Aligned_cols=68  Identities=40%  Similarity=0.820  Sum_probs=66.5

Q ss_pred             HHhhCCCChHHHHHHHHHhhHHHHHhccccchHhhhhheeeeccccchhhhhHHHHHHHHHHHhhhcc
Q 027783          128 MGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQ  195 (219)
Q Consensus       128 ~~~leg~s~~~~~~~lk~~~~~~l~~~~~vWp~~q~inF~~vP~~~Rvlf~n~v~~~W~~yLS~~~~~  195 (219)
                      |+++||+|++++++++|++++++++++|++|||+|++||+|||+++|++|+|+|+++||+|||+++|+
T Consensus         1 Mg~l~g~s~~~~~~~l~~~~~~~~~~~~~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~~LS~~~~r   68 (68)
T PF04117_consen    1 MGLLEGKSWEEIKEKLKRDYWPTLKASWKFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNTYLSYIANR   68 (68)
T ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHhcccChhhhhhhhhhHHHHHHHHHHHHhcC
Confidence            67899999999999999999999999999999999999999999999999999999999999999986

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00