Citrus Sinensis ID: 027798
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 218 | ||||||
| 358249046 | 268 | uncharacterized protein LOC100810003 [Gl | 1.0 | 0.813 | 0.788 | 3e-97 | |
| 224127704 | 268 | predicted protein [Populus trichocarpa] | 1.0 | 0.813 | 0.802 | 9e-95 | |
| 255541628 | 268 | conserved hypothetical protein [Ricinus | 1.0 | 0.813 | 0.798 | 4e-93 | |
| 449441454 | 268 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.813 | 0.816 | 9e-93 | |
| 388500274 | 268 | unknown [Lotus japonicus] | 1.0 | 0.813 | 0.775 | 4e-91 | |
| 357507383 | 268 | hypothetical protein MTR_7g077870 [Medic | 1.0 | 0.813 | 0.766 | 4e-91 | |
| 388522265 | 270 | unknown [Lotus japonicus] | 1.0 | 0.807 | 0.788 | 1e-89 | |
| 297824659 | 268 | hypothetical protein ARALYDRAFT_904052 [ | 1.0 | 0.813 | 0.756 | 1e-88 | |
| 356568400 | 268 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.813 | 0.766 | 5e-88 | |
| 18406942 | 268 | uncharacterized protein [Arabidopsis tha | 1.0 | 0.813 | 0.743 | 9e-87 |
| >gi|358249046|ref|NP_001239728.1| uncharacterized protein LOC100810003 [Glycine max] gi|255647823|gb|ACU24371.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 172/218 (78%), Positives = 194/218 (88%)
Query: 1 MHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
MHT+RPVVETGY+ +LLVRLLLE R P++RKSSVAEGLTVEGILENW K+KP+IMEEW E
Sbjct: 51 MHTVRPVVETGYENVLLVRLLLESRTPTIRKSSVAEGLTVEGILENWSKLKPIIMEEWDE 110
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
R+ LI+L GKVRDEW++ DF TWIGANRLYPGVSDALK ASSR+YIVT+ QSRF + LL
Sbjct: 111 KRDDLIDLFGKVRDEWLEQDFATWIGANRLYPGVSDALKFASSRVYIVTTKQSRFADALL 170
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
RELAGVTI P+R+YGLGTGPKV VLKQLQKKPEHQGL LHFVEDRLATLKNVIKEPELD
Sbjct: 171 RELAGVTIPPERIYGLGTGPKVEVLKQLQKKPEHQGLTLHFVEDRLATLKNVIKEPELDQ 230
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
WNLYL +WGYNT KER EAA++PRI +L+LS+F KLK
Sbjct: 231 WNLYLGNWGYNTQKEREEAAAIPRIHVLELSNFSKKLK 268
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127704|ref|XP_002320140.1| predicted protein [Populus trichocarpa] gi|222860913|gb|EEE98455.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 352 bits (902), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 175/218 (80%), Positives = 195/218 (89%)
Query: 1 MHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
MH +RPVVETGY+ LLLVRLLLEMR+PS+RKSSVAEGLTV+GIL+NW KIKPVIMEEW+E
Sbjct: 51 MHIVRPVVETGYENLLLVRLLLEMRIPSIRKSSVAEGLTVDGILDNWSKIKPVIMEEWAE 110
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
NR+ALIEL GKVRDEWMD D TWIGANR YPGV DALK ASS IYIVT+ QSRF + LL
Sbjct: 111 NRDALIELFGKVRDEWMDNDLATWIGANRFYPGVPDALKFASSSIYIVTTKQSRFADALL 170
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
+ELAG+ I P+R+YGLGTGPKV VLKQLQ+KPEHQGL+LHFVEDRLATLKNVIK+PELDG
Sbjct: 171 QELAGLKIPPERIYGLGTGPKVEVLKQLQRKPEHQGLKLHFVEDRLATLKNVIKDPELDG 230
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
WNLYL DWGYNT +ER EAAS+PRI LLQL+DF KLK
Sbjct: 231 WNLYLGDWGYNTHQERGEAASIPRITLLQLTDFSKKLK 268
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541628|ref|XP_002511878.1| conserved hypothetical protein [Ricinus communis] gi|223549058|gb|EEF50547.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 174/218 (79%), Positives = 193/218 (88%)
Query: 1 MHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
M +RPVVETGY+ LLLVRLLLEMR+PS+RKSSVAEGLTVEGILENW K+KPVIMEEW E
Sbjct: 51 MFIVRPVVETGYENLLLVRLLLEMRMPSIRKSSVAEGLTVEGILENWSKLKPVIMEEWGE 110
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
+R++LI L GK+RDEWMD D TWI ANR YPGV DALK ASSRIYIVT+ QSRF + LL
Sbjct: 111 DRDSLIHLFGKIRDEWMDKDLATWIAANRFYPGVPDALKFASSRIYIVTTKQSRFADALL 170
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
RELAG+TI P+++YGLGTGPKV VLKQLQ+KPE+QGL LHFVEDRLATLKNVIKEPELDG
Sbjct: 171 RELAGLTIPPEKIYGLGTGPKVKVLKQLQEKPEYQGLTLHFVEDRLATLKNVIKEPELDG 230
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
WNLYL DWGYNT KER EAAS+PRI+LLQLSDF KLK
Sbjct: 231 WNLYLGDWGYNTQKEREEAASIPRIRLLQLSDFSKKLK 268
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441454|ref|XP_004138497.1| PREDICTED: uncharacterized protein LOC101221288 [Cucumis sativus] gi|449529778|ref|XP_004171875.1| PREDICTED: uncharacterized LOC101221288 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 178/218 (81%), Positives = 195/218 (89%)
Query: 1 MHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
M+T+RPVVETGY+ LLLVRLLLEMRLPS+RKSSVAEGLTV GILENW K+KPVIMEEW E
Sbjct: 51 MYTVRPVVETGYENLLLVRLLLEMRLPSIRKSSVAEGLTVHGILENWSKLKPVIMEEWGE 110
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
NR+ALI+L GKVRD+W+D D TWIGANR YPGVSDALK ASSRIYIVT+ Q RF + LL
Sbjct: 111 NRDALIDLFGKVRDQWIDEDLATWIGANRFYPGVSDALKFASSRIYIVTTKQGRFADALL 170
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
RELAGVTI P+R+YGLGTGPKV VLK LQK PEHQGL+LHFVEDRLATLKNVIKE ELDG
Sbjct: 171 RELAGVTIPPERIYGLGTGPKVEVLKMLQKMPEHQGLKLHFVEDRLATLKNVIKESELDG 230
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
WN+YLVDWGYNT KER EAA++ RIQLLQLSDF TKLK
Sbjct: 231 WNIYLVDWGYNTQKEREEAAAIKRIQLLQLSDFSTKLK 268
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500274|gb|AFK38203.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 193/218 (88%)
Query: 1 MHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
MH +RPVVETGY+ LLLVRLLLE R PS+RKSSVAEGLTV+GILE W K+KPVIMEEW E
Sbjct: 51 MHAVRPVVETGYENLLLVRLLLETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGE 110
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
NR+ALI+L GKVRDEW++ +F TWIGANR+YPGVSDALK ASSR+YIVT+ QSRF + +L
Sbjct: 111 NRDALIDLFGKVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTKQSRFADAIL 170
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
RELAGVTI P+R+YGLG+GPKV VLKQLQKKPEHQG LHFVEDRLATLKNVIKEPELD
Sbjct: 171 RELAGVTIPPERIYGLGSGPKVEVLKQLQKKPEHQGPTLHFVEDRLATLKNVIKEPELDQ 230
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
WNLYL +WGYNT KE+ EAA++ RIQ+L+LSDF KLK
Sbjct: 231 WNLYLGNWGYNTRKEKEEAAAISRIQVLELSDFSKKLK 268
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507383|ref|XP_003623980.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|217073782|gb|ACJ85251.1| unknown [Medicago truncatula] gi|355498995|gb|AES80198.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|388518891|gb|AFK47507.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 193/218 (88%)
Query: 1 MHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
MHT+RPVVETGY+ LLLVRLLLE R PS+RKSSVAEGL VEGILE+W +KP+IMEEW E
Sbjct: 51 MHTVRPVVETGYENLLLVRLLLETRTPSIRKSSVAEGLAVEGILESWSTLKPIIMEEWGE 110
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
NREALI+L GKVRDEW++ DF WIGANR+YPGVSDALK ASS+++IVT+ QSRF + LL
Sbjct: 111 NREALIDLFGKVRDEWLEQDFAAWIGANRIYPGVSDALKFASSKVFIVTTKQSRFADALL 170
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
RELAGVTI +R+YGLGTGPKV +LKQLQK+PEHQGL LHFVEDRLATLKNVIKEPELD
Sbjct: 171 RELAGVTIPSERIYGLGTGPKVEILKQLQKRPEHQGLTLHFVEDRLATLKNVIKEPELDK 230
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
WNLYL +WGYNT +E+ EAA++PRI++LQLSDF KLK
Sbjct: 231 WNLYLGNWGYNTAQEKEEAAAIPRIRVLQLSDFSKKLK 268
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388522265|gb|AFK49194.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/218 (78%), Positives = 194/218 (88%)
Query: 1 MHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
M T+RPVVETGY+TLLLVRLLLE R+PS+RKSSVA+GLTVE ILENWLK+KPVIMEEW+E
Sbjct: 53 MITVRPVVETGYETLLLVRLLLETRVPSIRKSSVADGLTVEDILENWLKLKPVIMEEWNE 112
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
NRE LIEL GKVRD+W++ DF WIGANRLYPG +DAL+ ASSR+YIVT+ Q RF + LL
Sbjct: 113 NREDLIELFGKVRDDWLEKDFNGWIGANRLYPGTADALRFASSRVYIVTTKQGRFADALL 172
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
RELAGVT+ P+R+YGLGTGPKV VLK+LQK PEHQGL LHFVEDRLATLKNVIKEPELDG
Sbjct: 173 RELAGVTLPPERIYGLGTGPKVEVLKKLQKMPEHQGLTLHFVEDRLATLKNVIKEPELDG 232
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
WNLYLVDWG+NT KER EAA+ PRIQ+L LSDF KLK
Sbjct: 233 WNLYLVDWGFNTQKEREEAAANPRIQVLGLSDFSNKLK 270
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297824659|ref|XP_002880212.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] gi|297326051|gb|EFH56471.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 190/218 (87%)
Query: 1 MHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
MH +RPVVETGY+ LLLVRLLLE R+PS+RKSSVAEGLTV+GILE+W KIKPVIME W E
Sbjct: 51 MHIVRPVVETGYENLLLVRLLLETRIPSIRKSSVAEGLTVDGILESWAKIKPVIMEAWDE 110
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
+++ALI+L GKVRD+W++ D TTWIGANR YPGVSDALK ASS+IYIVT+ Q RF E LL
Sbjct: 111 DKDALIDLFGKVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALL 170
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
RE+AGV I +R+YGLG+GPKV VLK +Q KPEHQGL LHFVEDRLATLKNVIKEPELD
Sbjct: 171 REIAGVIIPSERIYGLGSGPKVEVLKLIQDKPEHQGLTLHFVEDRLATLKNVIKEPELDK 230
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
WNLYL +WGYNT KERAEAAS+PRIQ+++LS F KLK
Sbjct: 231 WNLYLGNWGYNTEKERAEAASIPRIQVIELSTFSNKLK 268
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356568400|ref|XP_003552399.1| PREDICTED: uncharacterized protein LOC100809469 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 329 bits (844), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 194/218 (88%)
Query: 1 MHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
M T+RPVVETGY+TLLLVRLLLE R+PS+RKSSV+EGL VE ILENW K+KP+IMEEW+E
Sbjct: 51 MITVRPVVETGYETLLLVRLLLETRVPSIRKSSVSEGLKVEDILENWFKLKPIIMEEWNE 110
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
NRE LI+L GKVRD+W++ DFT WIGANRLYPG +DAL+ ASS++YIVT+ QSRF + LL
Sbjct: 111 NREELIDLFGKVRDDWLERDFTGWIGANRLYPGTADALRFASSKVYIVTTKQSRFADALL 170
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
RELAGVTI P+RLYGLGTGPKV VLK+LQK PEHQGL LHFVEDRLATLKNVIKEPELD
Sbjct: 171 RELAGVTIAPERLYGLGTGPKVEVLKKLQKMPEHQGLTLHFVEDRLATLKNVIKEPELDN 230
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
WNLYLV+WG+NT KER EA + PRIQ+++LSDF +KLK
Sbjct: 231 WNLYLVNWGFNTQKEREEAQANPRIQVIELSDFSSKLK 268
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18406942|ref|NP_566060.1| uncharacterized protein [Arabidopsis thaliana] gi|30690184|ref|NP_850443.1| uncharacterized protein [Arabidopsis thaliana] gi|3702346|gb|AAC62903.1| expressed protein [Arabidopsis thaliana] gi|15292713|gb|AAK92725.1| unknown protein [Arabidopsis thaliana] gi|20197209|gb|AAM14973.1| expressed protein [Arabidopsis thaliana] gi|21280859|gb|AAM45106.1| unknown protein [Arabidopsis thaliana] gi|222423162|dbj|BAH19560.1| AT2G45990 [Arabidopsis thaliana] gi|330255533|gb|AEC10627.1| uncharacterized protein [Arabidopsis thaliana] gi|330255534|gb|AEC10628.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 325 bits (833), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 187/218 (85%)
Query: 1 MHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
MH +RPVVETGY+ LLLVRLLLE ++PS+RKSSVAEGLTV+GILE+W K KPVIME W E
Sbjct: 51 MHIVRPVVETGYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDE 110
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
+R+AL++L GKVRD+W++ D TTWIGANR YPGVSDALK ASS+IYIVT+ Q RF E LL
Sbjct: 111 DRDALVDLFGKVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALL 170
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
RE+AGV I +R+YGLG+GPKV VLK LQ KPEHQGL LHFVEDRLATLKNVIKEPELD
Sbjct: 171 REIAGVIIPSERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDK 230
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
W+LYL WGYNT KERAEAA +PRIQ+++LS F KLK
Sbjct: 231 WSLYLGTWGYNTEKERAEAAGIPRIQVIELSTFSNKLK 268
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 218 | ||||||
| TAIR|locus:2050730 | 268 | AT2G45990 "AT2G45990" [Arabido | 1.0 | 0.813 | 0.688 | 3.8e-78 |
| TAIR|locus:2050730 AT2G45990 "AT2G45990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 150/218 (68%), Positives = 172/218 (78%)
Query: 1 MHTLRPVVETGYDTXXXXXXXXXXXXXXXXKSSVAEGLTVEGILENWLKIKPVIMEEWSE 60
MH +RPVVETGY+ KSSVAEGLTV+GILE+W K KPVIME W E
Sbjct: 51 MHIVRPVVETGYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDE 110
Query: 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL 120
+R+AL++L GKVRD+W++ D TTWIGANR YPGVSDALK ASS+IYIVT+ Q RF E LL
Sbjct: 111 DRDALVDLFGKVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALL 170
Query: 121 RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180
RE+AGV I +R+YGLG+GPKV VLK LQ KPEHQGL LHFVEDRLATLKNVIKEPELD
Sbjct: 171 REIAGVIIPSERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDK 230
Query: 181 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218
W+LYL WGYNT KERAEAA +PRIQ+++LS F KLK
Sbjct: 231 WSLYLGTWGYNTEKERAEAAGIPRIQVIELSTFSNKLK 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 218 202 0.00090 111 3 11 22 0.38 33
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 616 (65 KB)
Total size of DFA: 179 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.10u 0.07s 17.17t Elapsed: 00:00:03
Total cpu time: 17.10u 0.07s 17.17t Elapsed: 00:00:03
Start: Sat May 11 09:49:57 2013 End: Sat May 11 09:50:00 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 218 | |||
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.9 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.89 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.88 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.88 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.87 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.87 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.86 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.85 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.84 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.84 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.83 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.81 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.8 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.79 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.77 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.77 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.76 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.76 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.75 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.75 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.75 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.75 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.74 | |
| PLN02940 | 382 | riboflavin kinase | 99.73 | |
| PLN02811 | 220 | hydrolase | 99.73 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.73 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.72 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.7 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.69 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.69 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.69 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.68 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.68 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.68 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.68 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.67 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.66 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.66 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.64 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.64 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.63 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.61 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.59 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.58 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.57 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.57 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.56 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.52 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.5 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.49 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.47 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.47 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.46 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.45 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.44 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.42 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.42 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.41 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.39 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.36 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.36 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.36 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.35 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.35 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.33 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.27 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.26 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.25 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.21 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.2 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.18 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.17 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.16 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.15 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.15 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.14 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.09 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.09 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.08 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.06 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.06 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.97 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.96 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.95 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 98.95 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 98.95 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.95 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.84 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 98.83 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.82 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 98.82 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 98.81 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 98.79 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.78 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 98.77 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.67 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.65 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.55 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.51 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 98.47 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.45 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.32 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.28 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 98.22 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 98.19 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 98.16 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.13 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 98.13 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.12 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.06 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.01 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.98 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 97.97 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 97.91 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 97.91 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 97.89 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 97.83 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.82 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 97.74 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 97.69 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 97.67 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.59 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.55 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.5 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 97.47 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 97.46 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.4 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.3 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.25 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.15 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.13 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.05 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 96.97 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 96.97 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 96.95 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.89 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 96.89 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.85 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 96.77 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 96.73 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 96.68 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 96.63 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 96.58 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.58 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.56 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.4 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 96.34 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.23 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.92 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.84 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 95.45 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 95.43 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.33 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 95.32 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.29 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 95.27 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.13 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 94.8 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 94.61 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 94.61 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 94.08 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 94.04 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 93.79 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 93.78 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 93.39 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 93.37 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 93.15 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 93.13 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 93.05 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 92.97 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 92.82 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 92.51 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 92.35 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 92.05 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 91.45 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 91.26 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 90.71 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 90.34 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 90.12 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 89.54 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 89.06 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 89.0 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 88.72 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 88.46 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 88.36 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 86.54 | |
| PLN02887 | 580 | hydrolase family protein | 86.33 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 85.74 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 85.47 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 84.49 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 84.38 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 83.19 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 82.7 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 82.65 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 82.6 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 81.11 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 80.65 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 80.45 | |
| KOG0323 | 635 | consensus TFIIF-interacting CTD phosphatases, incl | 80.4 |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=166.03 Aligned_cols=167 Identities=16% Similarity=0.053 Sum_probs=123.7
Q ss_pred CCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchH
Q 027798 38 LTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSR 114 (218)
Q Consensus 38 ~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~ 114 (218)
.+.+++...++......+... .+.........++..+. ........+|||+.++|+.| +.+++|+||+.+.
T Consensus 37 ~~~~~~~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~ 110 (214)
T PRK13288 37 YKREDVLPFIGPSLHDTFSKI--DESKVEEMITTYREFNH----EHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRD 110 (214)
T ss_pred CCHHHHHHHhCcCHHHHHHhc--CHHHHHHHHHHHHHHHH----HhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 456677777665555555443 23333333333333321 11234467999999999988 4699999999999
Q ss_pred HHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 115 FVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 115 ~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
.+...|+. +|+..+|+.|++++.. |+|+++.++..+.+.+|++|+||||+.+|+++| +++|+++++|.||+
T Consensus 111 ~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa----~~aG~~~i~v~~g~ 185 (214)
T PRK13288 111 TVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAG----KNAGTKTAGVAWTI 185 (214)
T ss_pred HHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHH----HHCCCeEEEEcCCC
Confidence 99999999 9999999999998653 777755444444444566699999999999999 99999999999999
Q ss_pred CCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 191 NTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 191 ~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..++++...+++ +.+.++.++.+++
T Consensus 186 ~~~~~l~~~~~~--~~i~~~~~l~~~i 210 (214)
T PRK13288 186 KGREYLEQYKPD--FMLDKMSDLLAIV 210 (214)
T ss_pred CCHHHHhhcCcC--EEECCHHHHHHHH
Confidence 887777666666 5566999998765
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=164.12 Aligned_cols=138 Identities=26% Similarity=0.386 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----
Q 027798 67 ELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---- 139 (218)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---- 139 (218)
+....+++.|...+.+.. ...+|||+.++|+.| +.+++|+||+++..++..|++ +|+..+|+.++|.+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~~~~K 145 (220)
T COG0546 69 ELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKA-LGLADYFDVIVGGDDVPPPK 145 (220)
T ss_pred HHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-hCCccccceEEcCCCCCCCC
Confidence 344445554433322222 358999999999988 469999999999999999999 9999999999995433
Q ss_pred ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 140 PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 140 pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
|+|+ ++++++.. |++++||||+.+|+++| ++||+++++|.|||+.++.+...+++ +.+.++.||..
T Consensus 146 P~P~~l~~~~~~~~~~----~~~~l~VGDs~~Di~aA----~~Ag~~~v~v~~g~~~~~~l~~~~~d--~vi~~~~el~~ 215 (220)
T COG0546 146 PDPEPLLLLLEKLGLD----PEEALMVGDSLNDILAA----KAAGVPAVGVTWGYNSREELAQAGAD--VVIDSLAELLA 215 (220)
T ss_pred cCHHHHHHHHHHhCCC----hhheEEECCCHHHHHHH----HHcCCCEEEEECCCCCCcchhhcCCC--EEECCHHHHHH
Confidence 5555 44555554 45599999999999999 99999999999999766777777777 55559999887
Q ss_pred hc
Q 027798 216 KL 217 (218)
Q Consensus 216 ~~ 217 (218)
.+
T Consensus 216 ~l 217 (220)
T COG0546 216 LL 217 (220)
T ss_pred HH
Confidence 65
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=161.10 Aligned_cols=184 Identities=15% Similarity=0.133 Sum_probs=128.4
Q ss_pred HHHHHHHHHhcccccccccccccCCCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCccc
Q 027798 14 TLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPG 93 (218)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 93 (218)
.++..+++.+......|. +..+.+.+...++.....+++..+.+........ ...+ + ......+|||
T Consensus 13 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~-----~-~~~~~~~~~g 79 (205)
T TIGR01454 13 FAVMREAFAIAYREVVGD----GPAPFEEYRRHLGRYFPDIMRIMGLPLEMEEPFV---RESY-----R-LAGEVEVFPG 79 (205)
T ss_pred HHHHHHHHHHHHHHhcCC----CCCCHHHHHHHhCccHHHHHHHcCCCHHHHHHHH---HHHH-----H-hhcccccCCC
Confidence 345555655544332221 1345566555555556666666665432111111 1111 1 1245789999
Q ss_pred HHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceEEEcCch
Q 027798 94 VSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLHFVEDRL 166 (218)
Q Consensus 94 v~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l~IGDs~ 166 (218)
+.++|+.| +.+++|+||++...+...+++ +|+..+|+.+++++.. |+|+++.....+...+|++|+||||+.
T Consensus 80 ~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~ 158 (205)
T TIGR01454 80 VPELLAELRADGVGTAIATGKSGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAV 158 (205)
T ss_pred HHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCH
Confidence 99999988 469999999999999999999 9999999999998653 666644443333333455599999999
Q ss_pred hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 167 ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 167 ~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+|+++| +++||++++|.||+++++++...+++ +.+.++.++.+.+
T Consensus 159 ~Di~aA----~~~Gi~~i~~~~g~~~~~~l~~~~~~--~~~~~~~~l~~~~ 203 (205)
T TIGR01454 159 TDLASA----RAAGTATVAALWGEGDAGELLAARPD--FLLRKPQSLLALC 203 (205)
T ss_pred HHHHHH----HHcCCeEEEEEecCCChhhhhhcCCC--eeeCCHHHHHHHh
Confidence 999999 99999999999999998888777777 5566999988765
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=167.46 Aligned_cols=168 Identities=20% Similarity=0.190 Sum_probs=124.6
Q ss_pred CCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchH
Q 027798 38 LTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSR 114 (218)
Q Consensus 38 ~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~ 114 (218)
.+.+.+....+.....+++..+.+.++..+....+.+.+ ..+.....+|||+.++|+.| +++++|+||+++.
T Consensus 96 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~ 170 (273)
T PRK13225 96 IDERDYAQLRQWSSRTIVRRAGLSPWQQARLLQRVQRQL-----GDCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQ 170 (273)
T ss_pred CCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHHH-----HhhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 444444333333445555666665444444444444433 22345678999999999998 4699999999999
Q ss_pred HHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH
Q 027798 115 FVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 115 ~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
.++..|++ +|+..+|+.|++.+.. +||+++..+..+...+|++|+||||+..|+++| ++|||.+|+|.||+..+
T Consensus 171 ~~~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA----~~AG~~~I~v~~g~~~~ 245 (273)
T PRK13225 171 NIEAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAA----RQVGLIAVAVTWGFNDR 245 (273)
T ss_pred HHHHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHH----HHCCCeEEEEecCCCCH
Confidence 99999999 9999999999887765 888854443333333455599999999999999 99999999999999988
Q ss_pred HHHHhhcCCCceEEechhhHhhhc
Q 027798 194 KERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 194 ~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++...+|+ +.+.++.+|.+++
T Consensus 246 ~~l~~~~ad--~~i~~~~eL~~~~ 267 (273)
T PRK13225 246 QSLVAACPD--WLLETPSDLLQAV 267 (273)
T ss_pred HHHHHCCCC--EEECCHHHHHHHH
Confidence 888777777 5566999887754
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.5e-21 Score=157.47 Aligned_cols=125 Identities=18% Similarity=0.224 Sum_probs=102.4
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCc
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e 158 (218)
+...+|||+.++|+.| +.+++|+||+++..++..+++ +|+..+|+.++|++.. |+|+++..+..+.+.+|++
T Consensus 82 ~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 160 (213)
T TIGR01449 82 ELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLEL-LGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQ 160 (213)
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhH
Confidence 4568999999999988 369999999999999999999 9999999999998653 7777444443333345555
Q ss_pred eEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 159 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+.+|+++| +++|+++++|.||+++.+.+...+++ +.+.++.+|...|
T Consensus 161 ~~~igDs~~d~~aa----~~aG~~~i~v~~g~~~~~~l~~~~a~--~~i~~~~~l~~~~ 213 (213)
T TIGR01449 161 MVYVGDSRVDIQAA----RAAGCPSVLLTYGYRYGEAIDLLPPD--VLYDSLNELPPLL 213 (213)
T ss_pred eEEeCCCHHHHHHH----HHCCCeEEEEccCCCCCcchhhcCCC--eEeCCHHHHHhhC
Confidence 99999999999999 99999999999999876666656666 5666999987653
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-21 Score=164.82 Aligned_cols=122 Identities=13% Similarity=0.025 Sum_probs=100.8
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC-CeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f-d~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
....+|||+.++|+.| +.+++|+||+++..++.+|++ +|+..+| |.|+|++.. |+|+ ++++++..
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~-- 172 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVY-- 172 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCC--
Confidence 4578999999999988 469999999999999999999 9999986 999998753 7777 55555542
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC----C-------------------HHHHHhhcCCCceEEech
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN----T-------------------PKERAEAASMPRIQLLQL 210 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~----~-------------------~~~l~~~~~~~~i~~~~l 210 (218)
+|++|+|||||.+|+++| ++|||.+|+|.||++ + .+++..++|+.+ +.++
T Consensus 173 -~~~~~l~IGDs~~Di~aA----~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v--~~~~ 245 (253)
T TIGR01422 173 -DVAACVKVGDTVPDIEEG----RNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYV--IDTL 245 (253)
T ss_pred -CchheEEECCcHHHHHHH----HHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEe--hhcH
Confidence 245599999999999999 999999999999987 2 356767777744 4599
Q ss_pred hhHhhhc
Q 027798 211 SDFCTKL 217 (218)
Q Consensus 211 ~el~~~~ 217 (218)
.||.+.+
T Consensus 246 ~el~~~~ 252 (253)
T TIGR01422 246 AELPAVI 252 (253)
T ss_pred HHHHHhh
Confidence 9987765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=157.79 Aligned_cols=166 Identities=15% Similarity=0.097 Sum_probs=118.7
Q ss_pred CCCHHHHHHhHHHhHHHHHHhh--CCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCC
Q 027798 37 GLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSN 111 (218)
Q Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~ 111 (218)
..+.+.+...++......+... ..+.....+....+.+.|.. .......+|||+.++|+.| +.+++|+||+
T Consensus 45 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~ 120 (229)
T PRK13226 45 PITLAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEA----LIGTQSQLFDGVEGMLQRLECAGCVWGIVTNK 120 (229)
T ss_pred CCCHHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHH----hhhhcCeeCCCHHHHHHHHHHCCCeEEEECCC
Confidence 3566666555554444444332 12333334444555554432 2223468999999999988 4699999999
Q ss_pred chHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE
Q 027798 112 QSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 112 ~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
+...+...+++ +|+..+|+.+++++.. |+|+ ++++++.+| ++|+||||+.+|+++| +++|+++
T Consensus 121 ~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p----~~~l~IGDs~~Di~aA----~~aG~~~ 191 (229)
T PRK13226 121 PEYLARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAP----TDCVYVGDDERDILAA----RAAGMPS 191 (229)
T ss_pred CHHHHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCCh----hhEEEeCCCHHHHHHH----HHCCCcE
Confidence 99999999999 9999999999988642 7777 555666555 4499999999999999 9999999
Q ss_pred EEEeCCCCCH-HHHHhhcCCCceEEechhhHhhhc
Q 027798 184 YLVDWGYNTP-KERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 184 i~v~~G~~~~-~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++|.||+... +.+...+++ +.+.++.||.+.+
T Consensus 192 i~v~~g~~~~~~~~~~~~~~--~~i~~~~el~~~~ 224 (229)
T PRK13226 192 VAALWGYRLHDDDPLAWQAD--VLVEQPQLLWNPA 224 (229)
T ss_pred EEEeecCCCCCcChhhcCCC--eeeCCHHHHHHHh
Confidence 9999999743 334445666 5566888887654
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-20 Score=155.10 Aligned_cols=153 Identities=14% Similarity=0.102 Sum_probs=114.2
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhh-hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC--
Q 027798 54 IMEEWSENREALIELSGKVRDEWMDTDFTTWI-GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT-- 127 (218)
Q Consensus 54 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~-- 127 (218)
++...+.+.+.+.+....+.+.+.. .+. ....++||+.++|+.| +.+++|+||+++..++..|++ +|+.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~ 129 (220)
T TIGR03351 55 LLALDGADEAEAQAAFADFEERLAE----AYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEK-LGWTVG 129 (220)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHH----HhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH-hhhhhh
Confidence 3344455544444455555544422 222 2357999999999998 469999999999999999999 9998
Q ss_pred CCCCeeEeCCCC----ChHHHHHHhhhcCCCC-CCceEEEcCchhhHHhccccccccCccE-EEEeCCCCCHHHHHhhcC
Q 027798 128 ITPDRLYGLGTG----PKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAAS 201 (218)
Q Consensus 128 ~~fd~i~~~~~~----pKPe~l~~l~~~~~~~-~~e~l~IGDs~~Di~aA~~~~~~aGi~~-i~v~~G~~~~~~l~~~~~ 201 (218)
.+|+.++|+++. |+|+++.....+.+.+ |++|+||||+.+|+++| +++||.+ +++.||+.+.+.+...++
T Consensus 130 ~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa----~~aG~~~~i~~~~g~~~~~~~~~~~~ 205 (220)
T TIGR03351 130 DDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAG----INAGAGAVVGVLTGAHDAEELSRHPH 205 (220)
T ss_pred ccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHH----HHCCCCeEEEEecCCCcHHHHhhcCC
Confidence 999999998653 7787444333333333 45699999999999999 9999999 999999988877766666
Q ss_pred CCceEEechhhHhhhc
Q 027798 202 MPRIQLLQLSDFCTKL 217 (218)
Q Consensus 202 ~~~i~~~~l~el~~~~ 217 (218)
+ ..+.++.+|.+.+
T Consensus 206 ~--~~i~~~~~l~~~~ 219 (220)
T TIGR03351 206 T--HVLDSVADLPALL 219 (220)
T ss_pred c--eeecCHHHHHHhh
Confidence 6 4555999987765
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=154.08 Aligned_cols=115 Identities=14% Similarity=0.051 Sum_probs=96.2
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....+|||+.++|+.| +++++|+||+++..++..|++ +|+..||+.|+++++. |+|+ ++++++++|
T Consensus 105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~-- 181 (248)
T PLN02770 105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSK-- 181 (248)
T ss_pred hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCCh--
Confidence 4578999999999988 469999999999999999999 9999999999998753 6666 556666554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhh
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 212 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~e 212 (218)
++|+||||+..|+++| +++|+++|+|.||+ ..+.+...+++ +.+.++.|
T Consensus 182 --~~~l~vgDs~~Di~aA----~~aGi~~i~v~~g~-~~~~l~~~~a~--~vi~~~~e 230 (248)
T PLN02770 182 --DHTFVFEDSVSGIKAG----VAAGMPVVGLTTRN-PESLLMEAKPT--FLIKDYED 230 (248)
T ss_pred --hHEEEEcCCHHHHHHH----HHCCCEEEEEeCCC-CHHHHhhcCCC--EEeccchh
Confidence 4499999999999999 99999999999996 45556556666 55557777
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=154.82 Aligned_cols=123 Identities=13% Similarity=0.010 Sum_probs=98.9
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC-CeeEeCCCC----ChHH----HHHHhhhcC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLGTG----PKVN----VLKQLQKKP 152 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f-d~i~~~~~~----pKPe----~l~~l~~~~ 152 (218)
.....+|||+.++|+.| +.+++|+||+++..+..+++. +|+..+| |.|+|+++. |+|+ +++++++.
T Consensus 97 ~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~- 174 (267)
T PRK13478 97 ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVY- 174 (267)
T ss_pred hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCC-
Confidence 34578999999999988 469999999999999999999 9998875 899988653 6677 45555543
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCC-----------------------HHHHHhhcCCCceEEec
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQ 209 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~-----------------------~~~l~~~~~~~~i~~~~ 209 (218)
++++|+||||+.+|+++| +++|+++|+|.||++. .+.+...+++.+ +.+
T Consensus 175 --~~~e~l~IGDs~~Di~aA----~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~v--i~~ 246 (267)
T PRK13478 175 --DVAACVKVDDTVPGIEEG----LNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYV--IDT 246 (267)
T ss_pred --CCcceEEEcCcHHHHHHH----HHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCee--hhh
Confidence 234599999999999999 9999999999999873 245666777744 458
Q ss_pred hhhHhhhc
Q 027798 210 LSDFCTKL 217 (218)
Q Consensus 210 l~el~~~~ 217 (218)
+.+|.+.+
T Consensus 247 ~~~l~~~l 254 (267)
T PRK13478 247 IADLPAVI 254 (267)
T ss_pred HHHHHHHH
Confidence 88887654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-19 Score=154.05 Aligned_cols=123 Identities=23% Similarity=0.280 Sum_probs=99.8
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCce
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~ 159 (218)
...+|||+.++|+.| +.+++|+||++...+...+++ +|+..+|+.+++++.. |+|+++..+..+.+.+|++|
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~ 177 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS 177 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE
Confidence 457999999999988 469999999999999999999 9999999999998643 66763333333333345559
Q ss_pred EEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
+||||+.+|+++| +++||++++|.||+.....+...+++. .+.++.+|.+.
T Consensus 178 l~IGD~~~Di~aA----~~aGi~~i~v~~G~~~~~~l~~~~~~~--vi~~l~el~~~ 228 (272)
T PRK13223 178 LFVGDSRSDVLAA----KAAGVQCVALSYGYNHGRPIAEESPAL--VIDDLRALLPG 228 (272)
T ss_pred EEECCCHHHHHHH----HHCCCeEEEEecCCCCchhhhhcCCCE--EECCHHHHHHH
Confidence 9999999999999 999999999999998777766666664 45599988754
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=143.19 Aligned_cols=146 Identities=22% Similarity=0.283 Sum_probs=110.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC
Q 027798 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 137 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~ 137 (218)
+.++.......+.+.|.. .......++||+.++|+.+ +++++|+||+....+...+++ +|+..+|+.+++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~ 143 (226)
T PRK13222 69 DEELLEKLRELFDRHYAE----NVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEA-LGIADYFSVVIGGD 143 (226)
T ss_pred cHHHHHHHHHHHHHHHHH----hccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCccCccEEEcCC
Confidence 344444445554444422 1123467999999999988 468999999999999999999 99999999999886
Q ss_pred CC----ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 138 TG----PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 138 ~~----pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
.. |+|+++..+....+.++++|+||||+.+|+++| +++|+++++|.||+....++....|+ +.+.++.+|
T Consensus 144 ~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a----~~~g~~~i~v~~g~~~~~~~~~~~~~--~~i~~~~~l 217 (226)
T PRK13222 144 SLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAA----RAAGCPSVGVTYGYNYGEPIALSEPD--VVIDHFAEL 217 (226)
T ss_pred CCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHH----HHCCCcEEEECcCCCCccchhhcCCC--EEECCHHHH
Confidence 43 777744444444444556699999999999999 99999999999998866555545555 666799999
Q ss_pred hhhc
Q 027798 214 CTKL 217 (218)
Q Consensus 214 ~~~~ 217 (218)
.+.|
T Consensus 218 ~~~l 221 (226)
T PRK13222 218 LPLL 221 (226)
T ss_pred HHHH
Confidence 8765
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-18 Score=147.74 Aligned_cols=115 Identities=16% Similarity=0.187 Sum_probs=94.7
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...+|||+.++|+.| +.+++|+||+++..++..+++ +|+..||+.|+++++. |+|+ +++++++++++
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~- 184 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPER- 184 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHH-
Confidence 467999999999988 469999999999999999999 9999999999998753 6666 56666655554
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
|+|||||..|+++| +++||++|+|. |+.....+. .++ +.+.++.+|..
T Consensus 185 ---~l~IgDs~~Di~aA----~~aG~~~i~v~-g~~~~~~l~--~ad--~vi~~~~el~~ 232 (260)
T PLN03243 185 ---CIVFGNSNSSVEAA----HDGCMKCVAVA-GKHPVYELS--AGD--LVVRRLDDLSV 232 (260)
T ss_pred ---eEEEcCCHHHHHHH----HHcCCEEEEEe-cCCchhhhc--cCC--EEeCCHHHHHH
Confidence 99999999999999 99999999996 776665442 344 55668888754
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-18 Score=143.68 Aligned_cols=123 Identities=10% Similarity=0.066 Sum_probs=92.5
Q ss_pred hcCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCC-eeEeCC-CC---ChHHHHHHhhhcCCCCCCceE
Q 027798 86 GANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPD-RLYGLG-TG---PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd-~i~~~~-~~---pKPe~l~~l~~~~~~~~~e~l 160 (218)
....++||+.++|+.|+.+++|+||+++..++..|++ +|+..+|+ .|++++ .+ |+|+++.....+.+.+|++|+
T Consensus 85 ~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 85 SELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred ccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 4578999999999999999999999999999999999 99999996 577764 33 677733333333333455599
Q ss_pred EEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
||||+..|+++| +++|++++++.++..... . ..++. ..+.++.||.+.+
T Consensus 164 ~igDs~~di~aA----~~aG~~~i~~~~~~~~~~-~-~~~~~--~~~~~~~~l~~~~ 212 (221)
T PRK10563 164 LVDDSSAGAQSG----IAAGMEVFYFCADPHNKP-I-DHPLV--TTFTDLAQLPELW 212 (221)
T ss_pred EEeCcHhhHHHH----HHCCCEEEEECCCCCCcc-h-hhhhh--HHHHHHHHHHHHH
Confidence 999999999999 999999999876544322 1 12333 2346888877653
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-17 Score=138.77 Aligned_cols=116 Identities=24% Similarity=0.234 Sum_probs=92.8
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...++||+.++|+.| |.+++|+||++...+...+++ +|+..+||.|++++.. |+|+ ++++++..
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~---- 166 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVK---- 166 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCC----
Confidence 468999999999988 468999999999999999999 9999999999987643 6666 55555554
Q ss_pred CCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHH-HhhcCCCceEEechhhH
Q 027798 156 GLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKER-AEAASMPRIQLLQLSDF 213 (218)
Q Consensus 156 ~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l-~~~~~~~~i~~~~l~el 213 (218)
|++|+||||+. +|+++| +++|+++|++.+|+....+. ....++ +.+.++.||
T Consensus 167 ~~~~~~igDs~~~di~~A----~~aG~~~i~~~~~~~~~~~~~~~~~~~--~~i~~~~el 220 (221)
T TIGR02253 167 PEEAVMVGDRLDKDIKGA----KNLGMKTVWINQGKSSKMEDDVYPYPD--YEISSLREL 220 (221)
T ss_pred hhhEEEECCChHHHHHHH----HHCCCEEEEECCCCCcccccccccCCC--eeeCcHHhh
Confidence 44599999998 899999 99999999999987644221 123344 566688776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-17 Score=149.97 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=93.8
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....+|||+.++|+.| +++++|+||+++..++..|++ +||..||+.|+++++. |+|+ ++++++..|++
T Consensus 213 ~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Pee 291 (381)
T PLN02575 213 GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPER 291 (381)
T ss_pred cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCccc
Confidence 3467999999999988 469999999999999999999 9999999999998754 6776 55566655554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
|+||||+..|+++| +++||++|+|.|++. ..++ ..++ +.+.++.||
T Consensus 292 ----cl~IGDS~~DIeAA----k~AGm~~IgV~~~~~-~~~l--~~Ad--~iI~s~~EL 337 (381)
T PLN02575 292 ----CIVFGNSNQTVEAA----HDARMKCVAVASKHP-IYEL--GAAD--LVVRRLDEL 337 (381)
T ss_pred ----EEEEcCCHHHHHHH----HHcCCEEEEECCCCC-hhHh--cCCC--EEECCHHHH
Confidence 99999999999999 999999999998753 3332 2344 456688887
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=139.25 Aligned_cols=122 Identities=19% Similarity=0.171 Sum_probs=96.2
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCc
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e 158 (218)
....+|||+.++|+.| |.+++|+||++...++..+++ +|+..+|+.+++++.. |+|+++..+....+.+|++
T Consensus 89 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 167 (222)
T PRK10826 89 ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLT 167 (222)
T ss_pred cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 4568999999999988 469999999999999999999 9999999999998653 7777333333333334555
Q ss_pred eEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 159 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
|+||||+.+|+++| +++|++++++.++....+.. ...++ ..+.++.||.+
T Consensus 168 ~~~igDs~~Di~aA----~~aG~~~i~v~~~~~~~~~~-~~~~~--~~~~~~~dl~~ 217 (222)
T PRK10826 168 CVALEDSFNGMIAA----KAARMRSIVVPAPEQQNDPR-WALAD--VKLESLTELTA 217 (222)
T ss_pred eEEEcCChhhHHHH----HHcCCEEEEecCCccCchhh-hhhhh--eeccCHHHHhh
Confidence 99999999999999 99999999999886554322 22344 56679998865
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.4e-18 Score=140.24 Aligned_cols=122 Identities=20% Similarity=0.184 Sum_probs=95.6
Q ss_pred hhhcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 84 WIGANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
+.....+|||+.++|+.|+ .+++|+||++...++..|++ +|+..+||.|++++.. |+|+ ++++++..+
T Consensus 90 ~~~~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~- 167 (224)
T PRK09449 90 MAEICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPD- 167 (224)
T ss_pred HhhcCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCC-
Confidence 3445679999999999984 69999999999999999999 9999999999988653 6666 555555432
Q ss_pred CCCCceEEEcCch-hhHHhccccccccCccEEEEeCC-CCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 154 HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWG-YNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 154 ~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G-~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
+++|+||||+. +|+++| +++||+++++.++ .... ....+ .+.+.++.||.+.+|
T Consensus 168 --~~~~~~vgD~~~~Di~~A----~~aG~~~i~~~~~~~~~~---~~~~~--~~~i~~~~el~~~l~ 223 (224)
T PRK09449 168 --RSRVLMVGDNLHSDILGG----INAGIDTCWLNAHGREQP---EGIAP--TYQVSSLSELEQLLC 223 (224)
T ss_pred --cccEEEEcCCcHHHHHHH----HHCCCcEEEECCCCCCCC---CCCCC--eEEECCHHHHHHHHh
Confidence 34599999998 699999 9999999999854 3221 12234 466779999988765
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=151.33 Aligned_cols=120 Identities=17% Similarity=0.258 Sum_probs=99.1
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC---ChHHHHHHhhhcCCCCCCceE
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---pKPe~l~~l~~~~~~~~~e~l 160 (218)
...+|||+.++|+.| +++++|+||+++..++..+++ +|+..||+.++++++. |||+.+.....+ .+|++|+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~--l~~~~~v 404 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNK--YDIKEAA 404 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHh--cCcceEE
Confidence 468999999999988 469999999999999999999 9999999999998753 899844443322 2456699
Q ss_pred EEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
||||+.+|+++| +++||.++++.||+...+++ ..++ +.+.++.||.+++
T Consensus 405 ~VGDs~~Di~aA----k~AG~~~I~v~~~~~~~~~~--~~~d--~~i~~l~el~~~l 453 (459)
T PRK06698 405 VVGDRLSDINAA----KDNGLIAIGCNFDFAQEDEL--AQAD--IVIDDLLELKGIL 453 (459)
T ss_pred EEeCCHHHHHHH----HHCCCeEEEEeCCCCccccc--CCCC--EEeCCHHHHHHHH
Confidence 999999999999 99999999999998765543 2444 6677999987765
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-17 Score=139.43 Aligned_cols=149 Identities=12% Similarity=0.098 Sum_probs=101.0
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 50 IKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 50 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
....++..+|++.+............ +..|.....+|||+.++|+.|+ .+++|+||++.. +++ +|+.
T Consensus 79 ~l~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~-~gl~ 147 (238)
T PRK10748 79 AIEQAMLDAGLSAEEASAGADAAMIN-----FAKWRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PEL-FGLG 147 (238)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHH-----HHHHhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHH-CCcH
Confidence 44445666676543322222222221 2233445789999999999994 589999998865 477 9999
Q ss_pred CCCCeeEeCCCC----ChHH----HHHHhhhcCCCCCCceEEEcCc-hhhHHhccccccccCccEEEEeCCCCCHHHHHh
Q 027798 128 ITPDRLYGLGTG----PKVN----VLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 198 (218)
Q Consensus 128 ~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~ 198 (218)
.+||.|++++.. |+|+ +++++++.+ ++|+||||+ ..|+++| +++||+++++..+.........
T Consensus 148 ~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~----~~~~~VGD~~~~Di~~A----~~aG~~~i~v~~~~~~~~~~~~ 219 (238)
T PRK10748 148 DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPI----GEILHVGDDLTTDVAGA----IRCGMQACWINPENGDLMQTWD 219 (238)
T ss_pred HhhceeEecccCCcCCCcHHHHHHHHHHcCCCh----hHEEEEcCCcHHHHHHH----HHCCCeEEEEcCCCcccccccc
Confidence 999999988643 6776 445555544 449999999 5999999 9999999999875432111111
Q ss_pred hcCCCceEEechhhHhhhc
Q 027798 199 AASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 199 ~~~~~~i~~~~l~el~~~~ 217 (218)
....+...+.+|.||.++|
T Consensus 220 ~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 220 SRLLPHIEISRLASLTSLI 238 (238)
T ss_pred ccCCCCEEECCHHHHHhhC
Confidence 1122446778999998764
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.5e-17 Score=136.14 Aligned_cols=114 Identities=20% Similarity=0.174 Sum_probs=89.5
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....+|||+.++|+.| +.+++|+||++...+...++. .|+ .+|+.+++++.. |+|+ +++++++.|++
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~-~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~ 157 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKA-AGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQE 157 (218)
T ss_pred cCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHh-cCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCccc
Confidence 4568999999999988 469999999999888888988 898 467888887543 6666 55566665555
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
|+|||||..|+++| ++||+++++|.||+... . ...++ +.+.++.||.
T Consensus 158 ----~l~igDs~~di~aA----~~aG~~~i~v~~~~~~~-~--~~~~~--~~~~~~~el~ 204 (218)
T PRK11587 158 ----CVVVEDAPAGVLSG----LAAGCHVIAVNAPADTP-R--LDEVD--LVLHSLEQLT 204 (218)
T ss_pred ----EEEEecchhhhHHH----HHCCCEEEEECCCCchh-h--hccCC--EEecchhhee
Confidence 99999999999999 99999999999986432 2 23444 5666888763
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.6e-17 Score=137.16 Aligned_cols=120 Identities=17% Similarity=0.086 Sum_probs=92.7
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....+|||+.++|+.| |.+++|+||+++..++..+++ +|+..+|+.|++++.. |+|+ ++++++++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~--- 165 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLK--- 165 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCC---
Confidence 4468999999999988 459999999999999999999 9999999999988643 6666 45555554
Q ss_pred CCCceEEEcCchhhHHhccccccccCcc-EEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWN-LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~-~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|++|+||||+..|+++| +++||+ +++|.+|.+..++. ...+. ..+.++.++.+.|
T Consensus 166 -p~~~l~igDs~~di~aA----~~aG~~~~~~v~~~~~~~~~~-~~~~~--~~~~~~~~~~~~l 221 (224)
T PRK14988 166 -AERTLFIDDSEPILDAA----AQFGIRYCLGVTNPDSGIAEK-QYQRH--PSLNDYRRLIPSL 221 (224)
T ss_pred -hHHEEEEcCCHHHHHHH----HHcCCeEEEEEeCCCCCccch-hccCC--CcHHHHHHHhhhh
Confidence 45599999999999999 999998 57898887654332 12222 3444666665543
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-17 Score=136.26 Aligned_cols=119 Identities=18% Similarity=0.264 Sum_probs=96.0
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHh-hhcCCC
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQL-QKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l-~~~~~~ 154 (218)
....++||+.++|+.|+ .+++|+||++...+...+++ +|+..+||.|++++.. |+|+ +++++ +.+
T Consensus 94 ~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~--- 169 (224)
T TIGR02254 94 EGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFS--- 169 (224)
T ss_pred ccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCC---
Confidence 34689999999999885 58999999999999999999 9999999999998643 6666 45555 544
Q ss_pred CCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|++|+||||+. +|+++| +++||+++++.||..... ...++ ...+.++.||.++|
T Consensus 170 -~~~~v~igD~~~~di~~A----~~~G~~~i~~~~~~~~~~--~~~~~--~~~~~~~~el~~~~ 224 (224)
T TIGR02254 170 -KEEVLMIGDSLTADIKGG----QNAGLDTCWMNPDMHPNP--DDIIP--TYEIRSLEELYEIL 224 (224)
T ss_pred -chheEEECCCcHHHHHHH----HHCCCcEEEECCCCCCCC--CCCCC--ceEECCHHHHHhhC
Confidence 45599999998 799999 999999999999865431 22334 46667999998764
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.1e-17 Score=145.91 Aligned_cols=116 Identities=15% Similarity=0.148 Sum_probs=94.5
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHH-HhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLR-ELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~-~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
....+|||+.++|+.| +.+++|+||+++..++..++ + +|+..+||.|+++++. |+|+ ++++++++++
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~-~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~ 168 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCH-QGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS 168 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc-cChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh
Confidence 3568999999999988 46999999999999998887 7 8999999999998753 6666 5666666555
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
+ |+||||+..|+++| +++||++++|.||+.... ...+++ ..+.++.||.
T Consensus 169 ~----~l~VGDs~~Di~aA----~~aGi~~I~v~~g~~~~~--~~~~ad--~~i~sl~el~ 217 (382)
T PLN02940 169 N----CLVIEDSLPGVMAG----KAAGMEVIAVPSIPKQTH--LYSSAD--EVINSLLDLQ 217 (382)
T ss_pred H----EEEEeCCHHHHHHH----HHcCCEEEEECCCCcchh--hccCcc--EEeCCHhHcC
Confidence 4 99999999999999 999999999999876443 223444 5666888874
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.7e-17 Score=136.28 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=88.8
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHH-HHHHhcCCCCCCCeeEeCC--CC----ChHH----HHHHhhhc
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVET-LLRELAGVTITPDRLYGLG--TG----PKVN----VLKQLQKK 151 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~-~L~~~~gl~~~fd~i~~~~--~~----pKPe----~l~~l~~~ 151 (218)
....+|||+.++|+.| +.+++|+||+++..... .++. .++..+|+.+++++ .. |+|+ ++++++ .
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~-~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~-~ 152 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRH-GELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFE-D 152 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHccc-HHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhC-C
Confidence 4568999999999988 46999999999865544 4444 57889999999987 43 6666 555554 1
Q ss_pred CCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 152 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
...+|++|+||||+..|+++| +++||++|+|.||+.+...+ .+++. .+.++.|+
T Consensus 153 ~~~~~~~~v~IgDs~~di~aA----~~aG~~~i~v~~~~~~~~~~--~~~d~--vi~~~~e~ 206 (220)
T PLN02811 153 GPVDPGKVLVFEDAPSGVEAA----KNAGMSVVMVPDPRLDKSYC--KGADQ--VLSSLLDF 206 (220)
T ss_pred CCCCccceEEEeccHhhHHHH----HHCCCeEEEEeCCCCcHhhh--hchhh--HhcCHhhC
Confidence 123455599999999999999 99999999999998765433 35553 44477765
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.1e-18 Score=135.62 Aligned_cols=124 Identities=15% Similarity=0.038 Sum_probs=87.1
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchH--------HHHHHHHHhcCCCCCCCeeE-eCCC-C---ChHHHHHHhhh
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSR--------FVETLLRELAGVTITPDRLY-GLGT-G---PKVNVLKQLQK 150 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~--------~~~~~L~~~~gl~~~fd~i~-~~~~-~---pKPe~l~~l~~ 150 (218)
...+|||+.++|+.| +.+++|+||++.. .....++. +|+..+|..+. +++. . |+|+++.+...
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence 457999999999998 4699999999852 23445777 78766554333 3332 2 77774444333
Q ss_pred cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH------HHHHhhcCCCceEEechhhHhhhc
Q 027798 151 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP------KERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~------~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+...+|++|+||||+..|+++| +++|+++|+|.||++.. +++....++ ..+.++.||.+.|
T Consensus 105 ~l~~~p~~~i~IGD~~~Di~aA----~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~--~~~~~~~el~~~l 171 (173)
T PRK06769 105 KHGLDLTQCAVIGDRWTDIVAA----AKVNATTILVRTGAGYDALHTYRDKWAHIEPN--YIAENFEDAVNWI 171 (173)
T ss_pred HcCCCHHHeEEEcCCHHHHHHH----HHCCCeEEEEecCCCchhhhhhhcccccCCCc--chhhCHHHHHHHH
Confidence 3334555599999999999999 99999999999998653 233344555 4445888887754
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.72 E-value=8e-17 Score=131.70 Aligned_cols=159 Identities=14% Similarity=0.087 Sum_probs=106.6
Q ss_pred CCCHHHHHHhHHHhHHHHH-HhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhcC--CCEEEEeCCch
Q 027798 37 GLTVEGILENWLKIKPVIM-EEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLAS--SRIYIVTSNQS 113 (218)
Q Consensus 37 ~~s~~~i~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~ 113 (218)
|.+.+++....+......+ ..++.+.++..+.+..+++ ..+.....+|||+.++|+.|+ .+++++||++.
T Consensus 28 g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~ 100 (197)
T PHA02597 28 NIPTDHILKMIQDERFRDPGELFGCDQELAKKLIEKYNN-------SDFIRYLSAYDDALDVINKLKEDYDFVAVTALGD 100 (197)
T ss_pred CCCHHHHHHHHhHhhhcCHHHHhcccHHHHHHHhhhhhH-------HHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCcc
Confidence 5566666655554322222 2233333333334333331 123345679999999999994 47889999887
Q ss_pred HHHHHHHHHhcCCCC----CCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccccccc--CccEEEE
Q 027798 114 RFVETLLRELAGVTI----TPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD--GWNLYLV 186 (218)
Q Consensus 114 ~~~~~~L~~~~gl~~----~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~a--Gi~~i~v 186 (218)
......++. +++.. +|+.+++++.. |||+.+.....+.+ |++|+||||+..|+++| ++| ||+++++
T Consensus 101 ~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA----~~a~~Gi~~i~~ 173 (197)
T PHA02597 101 SIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAA----HEALSQLPVIHM 173 (197)
T ss_pred chhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHH----HHHHcCCcEEEe
Confidence 777667777 77764 56778887666 89993333222222 44599999999999999 999 9999999
Q ss_pred eCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 187 DWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 187 ~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
.||+. ...|.+.+.+.++.|+..
T Consensus 174 ~~~~~------~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 174 LRGER------DHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred cchhh------ccccchhhhhccHHHHhc
Confidence 99964 234556677789988864
|
2 hypothetical protein; Provisional |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-16 Score=128.83 Aligned_cols=94 Identities=19% Similarity=0.268 Sum_probs=81.4
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...++||+.++|+.| |.+++|+||++...+...+++ +|+..+||.|++++.. |+|+ ++++++.+|++
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~- 167 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDE- 167 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhh-
Confidence 457999999999988 468999999999999999999 9999999999998753 5565 55666665555
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
|+||||+.+|+++| +++||++|+|..+
T Consensus 168 ---~~~vgD~~~Di~~A----~~~G~~~i~v~r~ 194 (198)
T TIGR01428 168 ---VLFVASNPWDLGGA----KKFGFKTAWVNRP 194 (198)
T ss_pred ---EEEEeCCHHHHHHH----HHCCCcEEEecCC
Confidence 99999999999999 9999999999764
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.5e-16 Score=125.96 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=74.8
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+.| +.+++|+||+.. ....|++ +|+..+|+.+++++.. |+|+++.....+.+.+|++|+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK-LGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh-cCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 47999999999988 469999999754 4578999 9999999999987643 777744333333334555699
Q ss_pred EEcCchhhHHhccccccccCccEEEEe
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
||||+.+|+++| +++||++|+|+
T Consensus 163 ~vgD~~~di~aA----~~aG~~~i~v~ 185 (185)
T TIGR01990 163 GIEDAQAGIEAI----KAAGMFAVGVG 185 (185)
T ss_pred EEecCHHHHHHH----HHcCCEEEecC
Confidence 999999999999 99999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.4e-17 Score=130.90 Aligned_cols=105 Identities=16% Similarity=0.121 Sum_probs=87.6
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCC-chHHHHHHHHHhcCCC---------CCCCeeEeCCCC--ChHH--HHHHh
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSN-QSRFVETLLRELAGVT---------ITPDRLYGLGTG--PKVN--VLKQL 148 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~-~~~~~~~~L~~~~gl~---------~~fd~i~~~~~~--pKPe--~l~~l 148 (218)
....+|||+.++|+.| |.+++|+||+ ....++..|+. +|+. .+|+.+++++.. +||. +++.+
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~ 120 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV 120 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHh
Confidence 3568999999999998 3699999999 88999999999 9998 999999998754 5544 66666
Q ss_pred hhcC--CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHH
Q 027798 149 QKKP--EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKE 195 (218)
Q Consensus 149 ~~~~--~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~ 195 (218)
+... ..+|++|+||||+..|+++| +++|+++++|.||+...+.
T Consensus 121 ~~~~~~gl~p~e~l~VgDs~~di~aA----~~aGi~~i~v~~g~~~~~~ 165 (174)
T TIGR01685 121 NKVDPSVLKPAQILFFDDRTDNVREV----WGYGVTSCYCPSGMDKGTF 165 (174)
T ss_pred hhcccCCCCHHHeEEEcChhHhHHHH----HHhCCEEEEcCCCccHHHH
Confidence 5332 35666699999999999999 9999999999999875543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.5e-16 Score=136.82 Aligned_cols=113 Identities=17% Similarity=0.191 Sum_probs=87.6
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC---CCCCeeEeCCC-C---ChHH----HHHHhhhcCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT---ITPDRLYGLGT-G---PKVN----VLKQLQKKPE 153 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~---~~fd~i~~~~~-~---pKPe----~l~~l~~~~~ 153 (218)
..++||+.++|+.| |++++|+||++...+..+++. ++.. .+|+.+ ++++ . |+|+ ++++++.+|
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~-~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p- 219 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT-LLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDP- 219 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcCh-
Confidence 47999999999987 569999999999999999998 6433 344544 5543 2 6666 555666554
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
++|+||||+.+|+++| +++||++|+|.||+..++++ .+++ +.+.++.++.
T Consensus 220 ---~~~l~IGDs~~Di~aA----~~aG~~~i~v~~g~~~~~~l--~~ad--~vi~~~~~l~ 269 (286)
T PLN02779 220 ---SRCVVVEDSVIGLQAA----KAAGMRCIVTKSSYTADEDF--SGAD--AVFDCLGDVP 269 (286)
T ss_pred ---HHEEEEeCCHHhHHHH----HHcCCEEEEEccCCcccccc--CCCc--EEECChhhcc
Confidence 4599999999999999 99999999999998876655 2444 5666887763
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-16 Score=128.19 Aligned_cols=91 Identities=21% Similarity=0.288 Sum_probs=79.0
Q ss_pred cCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--------ChHH----HHHHhhhcCCC
Q 027798 87 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--------PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--------pKPe----~l~~l~~~~~~ 154 (218)
...++||+.++|+.|+.+++|+||+++..+...+++ +|+..+||.|++++.. |+|+ ++++++.+|+
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~- 159 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE- 159 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc-
Confidence 457999999999999999999999999999999999 9999999999988642 4555 5556665554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEE
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
+|+||||+..|+++| +++|+++++|
T Consensus 160 ---~~l~vgD~~~di~aA----~~~G~~~i~v 184 (184)
T TIGR01993 160 ---RAIFFDDSARNIAAA----KALGMKTVLV 184 (184)
T ss_pred ---ceEEEeCCHHHHHHH----HHcCCEEeeC
Confidence 499999999999999 9999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.8e-16 Score=125.17 Aligned_cols=93 Identities=17% Similarity=0.161 Sum_probs=76.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCce
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~ 159 (218)
...++||+.++|+.| +.+++|+||+ ..++..|++ +|+..+|+.+++++.. |+|+++.....+.+.+|++|
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 162 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNEC 162 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence 468999999999988 4699999998 668899999 9999999999998643 66664444333334455669
Q ss_pred EEEcCchhhHHhccccccccCccEEEE
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
+||||+..|+++| +++|+++++|
T Consensus 163 v~IgD~~~di~aA----~~~G~~~i~v 185 (185)
T TIGR02009 163 VVFEDALAGVQAA----RAAGMFAVAV 185 (185)
T ss_pred EEEeCcHhhHHHH----HHCCCeEeeC
Confidence 9999999999999 9999999876
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.68 E-value=2e-16 Score=127.77 Aligned_cols=119 Identities=24% Similarity=0.209 Sum_probs=85.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCCCCeeEeC-----------
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL----------- 136 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~fd~i~~~----------- 136 (218)
....+|||+.++|+.| |.+++|+||++. ......+.+ +++. |+.++.+
T Consensus 23 ~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~ 99 (176)
T TIGR00213 23 DNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFR 99 (176)
T ss_pred HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCccccccc
Confidence 3457999999999998 469999999995 455567777 7776 7776532
Q ss_pred -CC--C-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE-EEEeCCCCCHHHHHhhcCCCceEEechh
Q 027798 137 -GT--G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLS 211 (218)
Q Consensus 137 -~~--~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~-i~v~~G~~~~~~l~~~~~~~~i~~~~l~ 211 (218)
+. . |+|+++.....+.+.++++|+||||+.+|+++| +++|+++ ++|.||+.... ....+++ +.+.++.
T Consensus 100 ~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA----~~aG~~~~i~v~~g~~~~~-~~~~~ad--~~i~~~~ 172 (176)
T TIGR00213 100 QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAG----VAAKVKTNVLVRTGKPITP-EAENIAD--WVLNSLA 172 (176)
T ss_pred CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHH----HHCCCcEEEEEecCCcccc-cccccCC--EEeccHH
Confidence 11 1 777744333333334455599999999999999 9999998 89999976432 2224455 5555888
Q ss_pred hHh
Q 027798 212 DFC 214 (218)
Q Consensus 212 el~ 214 (218)
||.
T Consensus 173 el~ 175 (176)
T TIGR00213 173 DLP 175 (176)
T ss_pred Hhh
Confidence 875
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.5e-16 Score=124.29 Aligned_cols=96 Identities=16% Similarity=0.098 Sum_probs=78.6
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCce
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~ 159 (218)
....++|| .++|+.|+ .+++|+||+++..++..|++ +|+..|||.|+++++. |+|+++.....+.+.+|++|
T Consensus 85 ~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 162 (188)
T PRK10725 85 DSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQC 162 (188)
T ss_pred ccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHe
Confidence 44578896 58888884 59999999999999999999 9999999999998753 77774444333333345559
Q ss_pred EEEcCchhhHHhccccccccCccEEEEe
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
+||||+.+|+++| +++|+++|+|.
T Consensus 163 l~igDs~~di~aA----~~aG~~~i~~~ 186 (188)
T PRK10725 163 VVFEDADFGIQAA----RAAGMDAVDVR 186 (188)
T ss_pred EEEeccHhhHHHH----HHCCCEEEeec
Confidence 9999999999999 99999999985
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.6e-16 Score=123.91 Aligned_cols=92 Identities=23% Similarity=0.337 Sum_probs=79.1
Q ss_pred hcCCCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.|+ .+++|+||++...+...+++ +|+..+|+.++++++. |+|+ ++++++++|+
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~- 151 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPE- 151 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGG-
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcc-
Confidence 45689999999999884 69999999999999999999 9999999999988643 5555 5555555554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEE
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
+|+||||+..|+++| +++||++|+|
T Consensus 152 ---~~~~vgD~~~d~~~A----~~~G~~~i~v 176 (176)
T PF13419_consen 152 ---EILFVGDSPSDVEAA----KEAGIKTIWV 176 (176)
T ss_dssp ---GEEEEESSHHHHHHH----HHTTSEEEEE
T ss_pred ---eEEEEeCCHHHHHHH----HHcCCeEEeC
Confidence 499999999999999 9999999986
|
... |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.9e-16 Score=125.45 Aligned_cols=120 Identities=23% Similarity=0.212 Sum_probs=87.9
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCCCCeeEeC-----CC-C--
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL-----GT-G-- 139 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~fd~i~~~-----~~-~-- 139 (218)
....+|||+.++|+.| +.+++|+||++. +.+...+++ +|+ +|+.++.+ +. .
T Consensus 26 ~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~ 102 (181)
T PRK08942 26 DEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCR 102 (181)
T ss_pred HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCC
Confidence 3457999999999998 469999999973 345566777 777 57777643 21 2
Q ss_pred -ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 140 -PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 140 -pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
|+|+ ++++++.+ |++|+||||+.+|+.+| +++|+.++++.||+.... +....+...+.+.++.++.
T Consensus 103 KP~p~~~~~~~~~l~~~----~~~~~~VgDs~~Di~~A----~~aG~~~i~v~~g~~~~~-~~~~~~~~~~ii~~l~el~ 173 (181)
T PRK08942 103 KPKPGMLLSIAERLNID----LAGSPMVGDSLRDLQAA----AAAGVTPVLVRTGKGVTT-LAEGAAPGTWVLDSLADLP 173 (181)
T ss_pred CCCHHHHHHHHHHcCCC----hhhEEEEeCCHHHHHHH----HHCCCeEEEEcCCCCchh-hhcccCCCceeecCHHHHH
Confidence 6676 55555554 45599999999999999 999999999999987443 3333441135667999988
Q ss_pred hhc
Q 027798 215 TKL 217 (218)
Q Consensus 215 ~~~ 217 (218)
+.+
T Consensus 174 ~~l 176 (181)
T PRK08942 174 QAL 176 (181)
T ss_pred HHH
Confidence 765
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.1e-16 Score=129.60 Aligned_cols=121 Identities=21% Similarity=0.244 Sum_probs=95.9
Q ss_pred hhcCCCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 85 IGANRLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
.....++||+.++|+.|+ ++++++||+++..+...|+. +|+.+||+.++++++. |.|| ++++|++.|+
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~ 160 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPE 160 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChH
Confidence 355689999999999996 79999999999999999999 9999999998887644 6666 7788887777
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH--HHHHhhcCCCceEEechhhHhhh
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP--KERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~--~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
+ |++|+||.++++|| ++|||.++++..++... ..+.....+ ..+.++.++...
T Consensus 161 ~----CvviEDs~~Gi~Aa----~aAGm~vv~v~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~ 215 (221)
T COG0637 161 E----CVVVEDSPAGIQAA----KAAGMRVVGVPAGHDRPHLDPLDAHGAD--TVLLDLAELPAL 215 (221)
T ss_pred H----eEEEecchhHHHHH----HHCCCEEEEecCCCCccccchhhhhhcc--hhhccHHHHHHH
Confidence 7 99999999999999 99999999998765532 222222333 334466666543
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.2e-15 Score=147.86 Aligned_cols=113 Identities=16% Similarity=0.180 Sum_probs=95.0
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC-CCCCeeEeCCCC----ChHH----HHHHhhhcCCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT-ITPDRLYGLGTG----PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~-~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~ 156 (218)
.+|||+.++|+.| +.+++|+||+.+..++..|++ +|+. .+||.+++++.. |+|+ +++++++.|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~--- 236 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTS--- 236 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcc---
Confidence 4899999999998 469999999999999999999 9996 899999998754 6676 5555665554
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
+|+||||+..|+++| +++||++|+|.||+ +.+++...+++ +.+.++.++
T Consensus 237 -e~v~IgDs~~Di~AA----~~aGm~~I~v~~~~-~~~~L~~~~a~--~vi~~l~el 285 (1057)
T PLN02919 237 -ECVVIEDALAGVQAA----RAAGMRCIAVTTTL-SEEILKDAGPS--LIRKDIGNI 285 (1057)
T ss_pred -cEEEEcCCHHHHHHH----HHcCCEEEEECCCC-CHHHHhhCCCC--EEECChHHC
Confidence 499999999999999 99999999999997 56777777776 455577776
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.2e-16 Score=128.37 Aligned_cols=119 Identities=23% Similarity=0.266 Sum_probs=95.7
Q ss_pred cCCCcccHHHHHHhcCCC--EEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--ChHH------HHHHhhhcCCCCC
Q 027798 87 ANRLYPGVSDALKLASSR--IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVN------VLKQLQKKPEHQG 156 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~~~--l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKPe------~l~~l~~~~~~~~ 156 (218)
..+++|++.+.|+.++.+ ++|+||+........|++ +||.++||.|++++.. .||+ ++++++++|++
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~-- 173 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEE-- 173 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcce--
Confidence 468999999999999765 999999999999999999 9999999999988654 5665 66777766555
Q ss_pred CceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 157 LRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 157 ~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+. +|+.+| +++||++|++..+.... ......+.+.+.++.++...+
T Consensus 174 --~l~VgD~~~~di~gA----~~~G~~~vwi~~~~~~~---~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 174 --ALFVGDSLENDILGA----RALGMKTVWINRGGKPL---PDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred --EEEECCChhhhhHHH----HhcCcEEEEECCCCCCC---CCCccCCceEEcCHHHHHHHH
Confidence 99999997 577999 99999999997664432 111234557777999988765
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.6e-15 Score=123.27 Aligned_cols=102 Identities=18% Similarity=0.176 Sum_probs=82.2
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~ 156 (218)
..++||+.++|+.| |.+++|+||++.......+....++..+||.|++++.. |+|+ ++++++++|++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~-- 160 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAAD-- 160 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhH--
Confidence 36899999999988 46999999999888777665524788999999988643 6676 55666655555
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHH
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERA 197 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~ 197 (218)
|+||||+..|+++| +++||+++++.++..-++.++
T Consensus 161 --~l~vgD~~~di~aA----~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 161 --AVFFDDNADNIEAA----NALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred --eEEeCCCHHHHHHH----HHcCCEEEEecCCccHHHHHH
Confidence 99999999999999 999999999988766555443
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.9e-15 Score=122.83 Aligned_cols=88 Identities=20% Similarity=0.261 Sum_probs=72.8
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~ 156 (218)
..++||+.++|+.| +.+++|+||++.. +...+++ +|+..+||.|++++.. |+|+ ++++++.+|
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~---- 177 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISP---- 177 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCh----
Confidence 47999999999988 3699999999875 4788999 9999999999988643 5666 555565544
Q ss_pred CceEEEcCch-hhHHhccccccccCccEEE
Q 027798 157 LRLHFVEDRL-ATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 157 ~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~ 185 (218)
++|+||||+. +|+++| +++||++|+
T Consensus 178 ~~~~~IgD~~~~Di~~A----~~aG~~~i~ 203 (203)
T TIGR02252 178 EEALHIGDSLRNDYQGA----RAAGWRALL 203 (203)
T ss_pred hHEEEECCCchHHHHHH----HHcCCeeeC
Confidence 4599999997 899999 999999874
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.1e-15 Score=119.66 Aligned_cols=99 Identities=21% Similarity=0.183 Sum_probs=78.7
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCc---------------hHHHHHHHHHhcCCCCCCCee-Ee----CCC-C--
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQ---------------SRFVETLLRELAGVTITPDRL-YG----LGT-G-- 139 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~---------------~~~~~~~L~~~~gl~~~fd~i-~~----~~~-~-- 139 (218)
....+|||+.++|+.| +.+++|+||++ ...+..++++ +|+. |+.+ +| ++. .
T Consensus 26 ~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~~ 102 (161)
T TIGR01261 26 EKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDCR 102 (161)
T ss_pred HHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCCC
Confidence 4468999999999998 46999999984 5678889999 9996 7655 55 333 2
Q ss_pred -ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 140 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 140 -pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
|+|+++..+......++++|+||||+.+|+++| +++||+++++.+|--
T Consensus 103 KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A----~~aGi~~i~~~~~~~ 151 (161)
T TIGR01261 103 KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLA----ENLGIRGIQYDEEEL 151 (161)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHH----HHCCCeEEEEChhhc
Confidence 777765555555555667799999999999999 999999999987643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-14 Score=116.15 Aligned_cols=93 Identities=23% Similarity=0.285 Sum_probs=74.9
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHHHHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+.| +.+++|+||++... ...+.+ +|+..+|+.|++++. + |+|++...+..+.+.+|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 68999999999988 46899999999988 778888 899999999988753 3 556643333333333455599
Q ss_pred EEcCchhhHHhccccccccCccEEEE
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
||||+..|+++| +++|+.+|+|
T Consensus 162 ~vgD~~~di~aA----~~~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAA----KAAGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHH----HHcCCEEEeC
Confidence 999999999999 9999999875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.6e-15 Score=123.05 Aligned_cols=101 Identities=21% Similarity=0.191 Sum_probs=78.3
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHH--HHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRF--VETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQLQKKPE 153 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~--~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~~ 153 (218)
...+|||+.++|+.| |++++|+||++... ....+.. +++..+||.|++++. + |+|+ ++++++++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 467999999999988 46999999987654 3344555 688899999998764 3 6666 5555665554
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHH
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
+|+||||+..|+++| +++||++|++.++....+++
T Consensus 171 ----~~l~i~D~~~di~aA----~~aG~~~i~v~~~~~~~~~l 205 (211)
T TIGR02247 171 ----ECVFLDDLGSNLKPA----AALGITTIKVSDEEQAIHDL 205 (211)
T ss_pred ----HeEEEcCCHHHHHHH----HHcCCEEEEECCHHHHHHHH
Confidence 499999999999999 99999999998765444444
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-14 Score=120.40 Aligned_cols=97 Identities=20% Similarity=0.236 Sum_probs=80.0
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhc---CCCCCCCeeEeCCCC--ChHH----HHHHhhhcCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGLGTG--PKVN----VLKQLQKKPE 153 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~---gl~~~fd~i~~~~~~--pKPe----~l~~l~~~~~ 153 (218)
....+|||+.++|+.| |.+++|+||++....+..+++ + ++..+|+.++....+ |+|+ +++++++.|+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~ 170 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPR 170 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChh
Confidence 4567999999999998 469999999999998888887 6 577778777654333 6676 6677776665
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
+ |+||||+..|+++| +++||+++++.++.+
T Consensus 171 e----~lfVgDs~~Di~AA----~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 171 E----ILFLSDIINELDAA----RKAGLHTGQLVRPGN 200 (220)
T ss_pred H----EEEEeCCHHHHHHH----HHcCCEEEEEECCCC
Confidence 5 99999999999999 999999999988754
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-14 Score=122.39 Aligned_cols=100 Identities=8% Similarity=-0.003 Sum_probs=82.6
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCC----chHHHHHHHHHhcCCCCCCCeeEeCCCC--ChHHHHHHhhhcCCCC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSN----QSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQ 155 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~----~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKPe~l~~l~~~~~~~ 155 (218)
.....+++++.++|+.+ |.+++|+||+ ....++.++++ +|+..+|+.+++++.. +||+....+ .+.+.
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~Kp~~~~~l-~~~~i- 186 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQYTKTQWI-QDKNI- 186 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCCCCHHHHH-HhCCC-
Confidence 34557888899999988 4699999998 66789999999 9999999999998764 666532222 23445
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHH
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 194 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~ 194 (218)
++||||+.+|+.+| ++||+++++|.||+++..
T Consensus 187 ---~i~vGDs~~DI~aA----k~AGi~~I~V~~g~~s~~ 218 (237)
T TIGR01672 187 ---RIHYGDSDNDITAA----KEAGARGIRILRASNSTY 218 (237)
T ss_pred ---eEEEeCCHHHHHHH----HHCCCCEEEEEecCCCCC
Confidence 89999999999999 999999999999999753
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.4e-14 Score=112.44 Aligned_cols=98 Identities=26% Similarity=0.243 Sum_probs=71.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCC--CCeeEe-CCC-C---Ch
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTIT--PDRLYG-LGT-G---PK 141 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~--fd~i~~-~~~-~---pK 141 (218)
..++|||+.++|+.| +++++|+||+++ ..+...+++ +|+... |..+.+ ++. . |+
T Consensus 25 ~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~ 103 (147)
T TIGR01656 25 DWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPK 103 (147)
T ss_pred HeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCC
Confidence 347999999999988 469999999984 567778888 998622 111111 332 1 77
Q ss_pred HHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 142 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
|+++..+....+.++++|+||||+..|+++| +++||+++++..|
T Consensus 104 ~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A----~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 104 PGLILEALKRLGVDASRSLVVGDRLRDLQAA----RNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHH----HHCCCCEEEecCC
Confidence 7744443333334555599999999999999 9999999998754
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.4e-13 Score=116.60 Aligned_cols=96 Identities=13% Similarity=0.063 Sum_probs=79.1
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCC----chHHHHHHHHHhcCC--CCCCCeeEeCCCC---ChHHHHHHhhhcC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSN----QSRFVETLLRELAGV--TITPDRLYGLGTG---PKVNVLKQLQKKP 152 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~----~~~~~~~~L~~~~gl--~~~fd~i~~~~~~---pKPe~l~~l~~~~ 152 (218)
.....|+||+.++|+.+ |.+++++||+ ....++.++++ +|+ ..+|+.+++.+.. .|.+.+++ .
T Consensus 110 ~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K~~K~~~l~~----~ 184 (237)
T PRK11009 110 DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQYTKTQWLKK----K 184 (237)
T ss_pred cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCCCCHHHHHHh----c
Confidence 44578999999999988 4699999995 45688888888 999 8999999987743 23334443 3
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
+. ++||||+.+|+++| ++||+++++|.||+++.
T Consensus 185 ~i----~I~IGDs~~Di~aA----~~AGi~~I~v~~G~~~~ 217 (237)
T PRK11009 185 NI----RIFYGDSDNDITAA----REAGARGIRILRAANST 217 (237)
T ss_pred CC----eEEEcCCHHHHHHH----HHcCCcEEEEecCCCCC
Confidence 45 99999999999999 99999999999999864
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.3e-14 Score=122.19 Aligned_cols=95 Identities=19% Similarity=0.090 Sum_probs=80.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCC-CCCeeEeCC----------CC-ChHH----HHHHh
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLG----------TG-PKVN----VLKQL 148 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~-~fd~i~~~~----------~~-pKPe----~l~~l 148 (218)
..++||+.++|+.| |.+++|+||++....+..++. +|+.. +|+.++|.+ .. |+|+ +++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 46899999999988 569999999999999999999 99996 999999987 22 6666 55555
Q ss_pred hhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
+.. ++++|+||||+.+|+++| +++||++++|.||-
T Consensus 265 ~~~---~~~~~~~vgD~~~d~~~a----~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 265 IAP---KYDVLLAVDDRDQVVDMW----RRIGLECWQVAPGD 299 (300)
T ss_pred hcc---CceEEEEEcCcHHHHHHH----HHhCCeEEEecCCC
Confidence 541 234499999999999999 99999999999983
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-13 Score=111.32 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=75.9
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCc-hHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~-~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+|||+.++|+.| +.+++|+||++ ...+..+++. +|+..++ ....|+|+++..+..+.+.++++|+|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 47999999999988 46999999999 6777777788 8875332 1123888844444333344556699999
Q ss_pred Cch-hhHHhccccccccCccEEEEeCCCCCHHHH
Q 027798 164 DRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 164 Ds~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
|+. .|+++| +++||.+++|.||+.+.+.+
T Consensus 116 Ds~~~Di~aA----~~aGi~~i~v~~g~~~~~~~ 145 (170)
T TIGR01668 116 DRLFTDVMGG----NRNGSYTILVEPLVHPDQWF 145 (170)
T ss_pred CcchHHHHHH----HHcCCeEEEEccCcCCcccc
Confidence 998 699999 99999999999999876544
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.47 E-value=8.6e-13 Score=108.01 Aligned_cols=82 Identities=13% Similarity=0.084 Sum_probs=67.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC---ChHH----HHHHhhhcCCCCCCc
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---PKVN----VLKQLQKKPEHQGLR 158 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---pKPe----~l~~l~~~~~~~~~e 158 (218)
.+.+++.++|+.| +.+++|+||+++..++..|+. +|+..+|+.++++++. |+|+ ++++++++++ +
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~----~ 180 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEAC----H 180 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcc----c
Confidence 3555568888877 469999999999999999999 9999999999998764 7776 5555665554 4
Q ss_pred eEEEcCchhhHHhcccccccc
Q 027798 159 LHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~a 179 (218)
|+||||+.+|+++| ++|
T Consensus 181 ~i~vGD~~~Di~aA----~~a 197 (197)
T TIGR01548 181 AAMVGDTVDDIITG----RKA 197 (197)
T ss_pred EEEEeCCHHHHHHH----HhC
Confidence 99999999999999 764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.6e-13 Score=105.39 Aligned_cols=93 Identities=32% Similarity=0.383 Sum_probs=72.6
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCc--------hHHHHHHHHHhcCCCCCCCeeEeCC-CC-ChHHHHHHhhhcC-C
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQ--------SRFVETLLRELAGVTITPDRLYGLG-TG-PKVNVLKQLQKKP-E 153 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~--------~~~~~~~L~~~~gl~~~fd~i~~~~-~~-pKPe~l~~l~~~~-~ 153 (218)
..+|||+.++|+.| +.+++|+||++ ...+...+++ +|+. |+.++.+. .. |+|+++..+..+. .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~--~~~~~~~~~~~KP~~~~~~~~~~~~~~ 100 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVP--IDVLYACPHCRKPKPGMFLEALKRFNE 100 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCC--EEEEEECCCCCCCChHHHHHHHHHcCC
Confidence 57999999999988 46999999999 8889999999 9986 34444333 22 7777544444443 2
Q ss_pred CCCCceEEEcC-chhhHHhccccccccCccEEEEe
Q 027798 154 HQGLRLHFVED-RLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 154 ~~~~e~l~IGD-s~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.+|++++|||| +..|+.+| +++|+.+|++.
T Consensus 101 ~~~~~~v~IGD~~~~Di~~A----~~~Gi~~i~~~ 131 (132)
T TIGR01662 101 IDPEESVYVGDQDLTDLQAA----KRAGLAFILVA 131 (132)
T ss_pred CChhheEEEcCCCcccHHHH----HHCCCeEEEee
Confidence 45666999999 79999999 99999999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-12 Score=101.95 Aligned_cols=84 Identities=21% Similarity=0.255 Sum_probs=70.5
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC---ChHH----HHHHhhhcCCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---pKPe----~l~~l~~~~~~~ 155 (218)
.....+||+.++|+.| +.+++|+||+++..+...+++ + +..+|+.|+++++. |+|+ ++++++.+
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~---- 134 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLP---- 134 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCC----
Confidence 3456789999999988 469999999999999999998 7 89999999998754 6666 45555554
Q ss_pred CCceEEEcCchhhHHhccccccccC
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aG 180 (218)
| +|+||||+..|+++| +++|
T Consensus 135 ~-~~l~iGDs~~Di~aa----~~aG 154 (154)
T TIGR01549 135 P-EVLHVGDNLNDIEGA----RNAG 154 (154)
T ss_pred C-CEEEEeCCHHHHHHH----HHcc
Confidence 4 599999999999999 9987
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.8e-13 Score=109.54 Aligned_cols=80 Identities=19% Similarity=0.265 Sum_probs=68.7
Q ss_pred cCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcCCCCCCc
Q 027798 87 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQLQKKPEHQGLR 158 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~~~~~~e 158 (218)
...++||+.++|+ +++|+||++...++..+++ +|+..+||.|++++. + |+|+ ++++++++|++
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~---- 158 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDR---- 158 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHH----
Confidence 4679999999998 5899999999999999999 999999999999875 3 6666 66666665555
Q ss_pred eEEEcCchhhHHhcccccccc
Q 027798 159 LHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~a 179 (218)
|+||||+..|+++| +++
T Consensus 159 ~l~vgD~~~Di~~A----~~~ 175 (175)
T TIGR01493 159 VLMVAAHQWDLIGA----RKF 175 (175)
T ss_pred eEeEecChhhHHHH----hcC
Confidence 99999999999999 764
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.3e-13 Score=107.14 Aligned_cols=87 Identities=16% Similarity=0.086 Sum_probs=76.1
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCC-CCCeeEeCCCC--ChHH---HHHHhhhcCCCCCCce
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVN---VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~-~fd~i~~~~~~--pKPe---~l~~l~~~~~~~~~e~ 159 (218)
..++||+.++|+.|+ .+++|+||+++..++.++++ +++.. +|+.|+++++. .||. +++.++.++++ |
T Consensus 44 v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~----~ 118 (148)
T smart00577 44 VKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSN----V 118 (148)
T ss_pred EEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhc----E
Confidence 478999999999984 59999999999999999999 99965 56999998765 7887 77778776666 9
Q ss_pred EEEcCchhhHHhccccccccCccE
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
+||||+..|+++| +++||.+
T Consensus 119 i~i~Ds~~~~~aa----~~ngI~i 138 (148)
T smart00577 119 IIIDDSPDSWPFH----PENLIPI 138 (148)
T ss_pred EEEECCHHHhhcC----ccCEEEe
Confidence 9999999999999 9999865
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=6e-12 Score=103.12 Aligned_cols=118 Identities=12% Similarity=0.079 Sum_probs=86.0
Q ss_pred hhcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE---------eCCCC---ChHHHHHHhhh
Q 027798 85 IGANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLY---------GLGTG---PKVNVLKQLQK 150 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~---------~~~~~---pKPe~l~~l~~ 150 (218)
.....+|||+.++|+.|+ .+++|+||+....++..+++ +|+..+|+..+ +.+.. +|+.+++.++.
T Consensus 64 ~~~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 64 IATLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HHhCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 355789999999999885 59999999999999999999 99998886433 22211 34457777776
Q ss_pred cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 151 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.+++ |+||||+.+|+.+| +++|+.+ .+++. . ......++. ..+.++.+|.+.+
T Consensus 143 ~~~~----~v~iGDs~~D~~~~----~aa~~~v---~~~~~-~-~~~~~~~~~-~~~~~~~el~~~l 195 (205)
T PRK13582 143 LGYR----VIAAGDSYNDTTML----GEADAGI---LFRPP-A-NVIAEFPQF-PAVHTYDELLAAI 195 (205)
T ss_pred hCCe----EEEEeCCHHHHHHH----HhCCCCE---EECCC-H-HHHHhCCcc-cccCCHHHHHHHH
Confidence 6655 99999999999999 9999743 34432 2 232333442 2456888887654
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.5e-12 Score=106.88 Aligned_cols=120 Identities=18% Similarity=0.295 Sum_probs=87.6
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC--CCCCe---------eEeCC------CC-ChHHHHH
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT--ITPDR---------LYGLG------TG-PKVNVLK 146 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~--~~fd~---------i~~~~------~~-pKPe~l~ 146 (218)
..++||+.++|+.+ +.+++|+||+....++.+++. +|+. .+|+. +.|.+ .. +||+++.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 46899999999987 469999999999999999999 9996 35532 22221 11 7998777
Q ss_pred HhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 147 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.+..... .++|+||||+.+|+.+| +++|+.++.+ ||+....+.....++ +.+.++.+|.+.+
T Consensus 162 ~~~~~~~--~~~~i~iGDs~~Di~aa----~~~~~~~~~~-~~~~~~~~~~~~~~~--~~i~~~~el~~~~ 223 (224)
T PLN02954 162 HIKKKHG--YKTMVMIGDGATDLEAR----KPGGADLFIG-YGGVQVREAVAAKAD--WFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHcC--CCceEEEeCCHHHHHhh----hcCCCCEEEe-cCCCccCHHHHhcCC--EEECCHHHHHHhh
Confidence 6654422 24599999999999999 9999887654 554332233344555 5566999998765
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.8e-13 Score=106.61 Aligned_cols=89 Identities=25% Similarity=0.312 Sum_probs=67.0
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchH------------HHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhh
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSR------------FVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQK 150 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~------------~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~ 150 (218)
+|||+.++|+.| |.+++|+||++.. .++.+|++ +|+.. +.+++++.. |+|+++..+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHHH
Confidence 799999999988 4699999999874 56788999 99853 556655432 66664444333
Q ss_pred cCC--CCCCceEEEcCch--------hhHHhccccccccCccEEE
Q 027798 151 KPE--HQGLRLHFVEDRL--------ATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 151 ~~~--~~~~e~l~IGDs~--------~Di~aA~~~~~~aGi~~i~ 185 (218)
... .++++|+||||+. +|+++| +++|+++++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA----~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFA----KNLGLEFKY 160 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHH----HHCCCCcCC
Confidence 333 4556699999996 699999 999998864
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.4e-12 Score=105.77 Aligned_cols=121 Identities=14% Similarity=0.074 Sum_probs=86.8
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCee-------EeC----CC--C-ChHHHHHH
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRL-------YGL----GT--G-PKVNVLKQ 147 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i-------~~~----~~--~-pKPe~l~~ 147 (218)
.....++||+.++|+.| +.+++|+||+....++..+++ +|+..+|+.. +.. .. . |||++++.
T Consensus 81 ~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 159 (219)
T TIGR00338 81 RENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLI 159 (219)
T ss_pred HhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHH
Confidence 34567999999999988 469999999999999999999 9999888532 111 11 1 58886665
Q ss_pred hhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 148 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
+..+.+.++++|+||||+.+|+.+| +++|+.++ + + ..+.+. ..++.++.=.++.++...
T Consensus 160 ~~~~~~~~~~~~i~iGDs~~Di~aa----~~ag~~i~-~--~--~~~~~~-~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 160 LLRKEGISPENTVAVGDGANDLSMI----KAAGLGIA-F--N--AKPKLQ-QKADICINKKDLTDILPL 218 (219)
T ss_pred HHHHcCCCHHHEEEEECCHHHHHHH----HhCCCeEE-e--C--CCHHHH-HhchhccCCCCHHHHHhh
Confidence 5444445566699999999999999 99999753 2 2 123332 345555655577777654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.8e-13 Score=115.99 Aligned_cols=124 Identities=12% Similarity=0.061 Sum_probs=89.0
Q ss_pred CCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC---C---C-ChHHHHHHhhhcCCCCCCc
Q 027798 89 RLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---T---G-PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 89 ~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~---~---~-pKPe~l~~l~~~~~~~~~e 158 (218)
-.|+++.++++.|. .+++|+||+++......+.. +|+..+|+.+.++. . + |+|+++.....+.+.+|++
T Consensus 120 ~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~ 198 (257)
T TIGR01458 120 FSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEE 198 (257)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhh
Confidence 35788888888773 48899999998887777777 89999998777542 2 2 6666333333222334555
Q ss_pred eEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+. +|+.+| +++|+++++|.||....++.......+.+.+.++.||.+.|
T Consensus 199 ~~~vGD~~~~Di~~a----~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 199 AVMIGDDCRDDVGGA----QDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred EEEECCCcHHHHHHH----HHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 99999996 899999 99999999999997554433222233446667999987654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.4e-13 Score=117.49 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=82.7
Q ss_pred CCcccHHHHHHhcC--CCEEEEeCCchHHH-HHHHHHhcCCCCCCCeeEe---CCC---C-ChHHHHHHhhhcCCCCCCc
Q 027798 89 RLYPGVSDALKLAS--SRIYIVTSNQSRFV-ETLLRELAGVTITPDRLYG---LGT---G-PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 89 ~l~~gv~e~L~~L~--~~l~IvTn~~~~~~-~~~L~~~~gl~~~fd~i~~---~~~---~-pKPe~l~~l~~~~~~~~~e 158 (218)
.-|+|+.++|+.|. ..++|+||++.... ...+.. .|+..+|+.+.+ .+. + |+|+++..+....+.+|++
T Consensus 143 ~~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~ 221 (279)
T TIGR01452 143 FSYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPAR 221 (279)
T ss_pred CCHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhh
Confidence 35899999999884 35899999997543 222344 577777776643 332 1 6666333333333345555
Q ss_pred eEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhh------cCCCceEEechhhH
Q 027798 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA------ASMPRIQLLQLSDF 213 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~------~~~~~i~~~~l~el 213 (218)
|+||||+. +||++| +++||++++|.||+.+.+++... ...|.+.+.++.+|
T Consensus 222 ~lmIGD~~~tDI~~A----~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 222 TLMVGDRLETDILFG----HRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EEEECCChHHHHHHH----HHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999995 899999 99999999999999998887642 12244666677664
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.2e-12 Score=104.38 Aligned_cols=115 Identities=15% Similarity=0.239 Sum_probs=82.6
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE------eCCCC-----------------
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLY------GLGTG----------------- 139 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~------~~~~~----------------- 139 (218)
....++||+.++|+.+ +.+++|+||+....++.+|++ + +.. +.++ +.+..
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~--~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~ 146 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPK--EQIYCNGSDFSGEYITITWPHPCDEHCQNHCG 146 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCc--CcEEEeEEEecCCeeEEeccCCccccccccCC
Confidence 4578999999999987 469999999999999999999 7 643 2333 22211
Q ss_pred -ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 140 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 140 -pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.|+.++++++..+.. |+||||+.+|+.+| ++||+.++ . + ...+.......+.+.+.++.|+.+.|
T Consensus 147 ~~K~~~l~~~~~~~~~----~i~iGDs~~Di~aa----~~Ag~~~a--~-~--~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 147 CCKPSLIRKLSDTNDF----HIVIGDSITDLEAA----KQADKVFA--R-D--FLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred CchHHHHHHhccCCCC----EEEEeCCHHHHHHH----HHCCccee--H-H--HHHHHHHHcCCCccccCCHHHHHHHH
Confidence 255688888776665 99999999999999 99999333 2 2 11111123444567778999887665
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=6.6e-12 Score=111.95 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=76.4
Q ss_pred hhhcCCCcccHHHHHHhc---CCCEEEEeCC---------------chHHHHHHHHHhcCCCCCCCee-EeC----CC-C
Q 027798 84 WIGANRLYPGVSDALKLA---SSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YGL----GT-G 139 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L---~~~l~IvTn~---------------~~~~~~~~L~~~~gl~~~fd~i-~~~----~~-~ 139 (218)
+.+...+|||+.++|+.| +.+++|+||+ ....+..+++. +|+. |+.+ ++. +. .
T Consensus 25 ~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~ 101 (354)
T PRK05446 25 SLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCS 101 (354)
T ss_pred CcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCC
Confidence 345678999999999988 3599999996 35567778888 8884 7765 442 22 2
Q ss_pred ---ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 140 ---PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 140 ---pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
|+|+++..+..+...+|++++||||+.+|+++| +++||++++|+..
T Consensus 102 ~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aA----k~aGi~~I~v~~~ 150 (354)
T PRK05446 102 CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLA----ENMGIKGIRYARE 150 (354)
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHH----HHCCCeEEEEECC
Confidence 777766655555555667799999999999999 9999999999543
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.6e-11 Score=98.78 Aligned_cols=88 Identities=14% Similarity=0.255 Sum_probs=74.8
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-----------------------C-
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----------------------G- 139 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-----------------------~- 139 (218)
...++||+.++|+.| +.+++|+||+....++..+++ +|+..+|+.|+|++. +
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 368999999999987 469999999999999999999 999999999997521 2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCcc
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
+||++++++..+. +++++||||+.+|+.+| +++++-
T Consensus 149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa----~~~d~~ 184 (188)
T TIGR01489 149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPA----KLSDVV 184 (188)
T ss_pred CHHHHHHHHHhhc---CceEEEECCCcchhchH----hcCCcc
Confidence 6888999887651 34499999999999999 998763
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-11 Score=100.26 Aligned_cols=100 Identities=13% Similarity=0.081 Sum_probs=75.9
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-CC-------------ChHHHHHH
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TG-------------PKVNVLKQ 147 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-~~-------------pKPe~l~~ 147 (218)
.....++||+.++|+.| +.+++|+||+....++.++++ +|+..+|+.++..+ .+ +|++++..
T Consensus 76 ~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~ 154 (201)
T TIGR01491 76 FKEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVER 154 (201)
T ss_pred HHhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHH
Confidence 34568999999999988 469999999999999999999 99988876655432 22 23345444
Q ss_pred hhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 148 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
+....+.++++|+||||+.+|+.+| +++|+.++....+
T Consensus 155 ~~~~~~~~~~~~i~iGDs~~D~~~a----~~ag~~~a~~~~~ 192 (201)
T TIGR01491 155 LKRELNPSLTETVAVGDSKNDLPMF----EVADISISLGDEG 192 (201)
T ss_pred HHHHhCCCHHHEEEEcCCHhHHHHH----HhcCCeEEECCCc
Confidence 4333334555699999999999999 9999977654433
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.3e-12 Score=96.70 Aligned_cols=79 Identities=22% Similarity=0.166 Sum_probs=67.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCC-chHHHHHHHHHhcC-------CCCCCCeeEeCCCCChHH----HHHHhh--hc
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSN-QSRFVETLLRELAG-------VTITPDRLYGLGTGPKVN----VLKQLQ--KK 151 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~-~~~~~~~~L~~~~g-------l~~~fd~i~~~~~~pKPe----~l~~l~--~~ 151 (218)
.+|||+.++|+.| +.+++|+||+ ....+...+++ ++ +..+|+.+++++..|||+ ++++++ +.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 4899999999988 4699999999 88888899998 88 899999999886568887 666666 55
Q ss_pred CCCCCCceEEEcCchhhHHhc
Q 027798 152 PEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA 172 (218)
|++ |+||||+..|+.+.
T Consensus 108 p~~----~l~igDs~~n~~~~ 124 (128)
T TIGR01681 108 PKS----ILFVDDRPDNNEEV 124 (128)
T ss_pred cce----EEEECCCHhHHHHH
Confidence 555 99999999998876
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.8e-12 Score=111.83 Aligned_cols=111 Identities=19% Similarity=0.172 Sum_probs=79.3
Q ss_pred CCEEEEeCCchHH-HHHHHHHhcCCCCCCCeeEeCCCC-------ChHHHHHHhhhcCCCCCCceEEEcCch-hhHHhcc
Q 027798 103 SRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLGTG-------PKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVI 173 (218)
Q Consensus 103 ~~l~IvTn~~~~~-~~~~L~~~~gl~~~fd~i~~~~~~-------pKPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~ 173 (218)
..++|+||++... ....+.. .|+..+|+.+.+.... |+|+++.......+.++++++||||+. +|+++|
T Consensus 187 g~~~i~tn~d~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A- 264 (311)
T PLN02645 187 GCLFIATNRDAVTHLTDAQEW-AGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG- 264 (311)
T ss_pred CCEEEEeCCCCCCCCCCCCCc-cchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH-
Confidence 4799999999754 3344455 7888889888765321 455544433333334555599999997 899999
Q ss_pred ccccccCccEEEEeCCCCCHHHHHhh--cCCCceEEechhhHhhhcC
Q 027798 174 KEPELDGWNLYLVDWGYNTPKERAEA--ASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 174 ~~~~~aGi~~i~v~~G~~~~~~l~~~--~~~~~i~~~~l~el~~~~~ 218 (218)
+++|+++++|.||+.+.+++... ...|.+.+.++.+|.++++
T Consensus 265 ---~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 265 ---QNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred ---HHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 99999999999999988877542 1234467779999987653
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.9e-11 Score=90.00 Aligned_cols=95 Identities=25% Similarity=0.233 Sum_probs=76.7
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--------------------ChHH
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--------------------PKVN 143 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--------------------pKPe 143 (218)
...+++++.++|+.| +.+++|+||+.+..++..++. +|+..+|+.+++++.. ||++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 357999999999988 358999999999999999999 9999999998876532 3455
Q ss_pred HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEE
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
..+.+......++++++||||+.+|+++| +++|+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~----~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMA----KAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHH----HHcCCceeeC
Confidence 44444444344466699999999999999 9999998875
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.20 E-value=2e-11 Score=85.23 Aligned_cols=70 Identities=21% Similarity=0.251 Sum_probs=52.5
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCc-hhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
|+|.++.......+.++++|+||||+ .+||++| +++|+.+++|.+|..+.+++......+.+.+.||.|+
T Consensus 5 P~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a----~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 5 PSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAA----KAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp TSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHH----HHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHH----HHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 66664433333333345559999999 8999999 9999999999999998877764445555777799875
|
... |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.7e-11 Score=93.39 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=66.1
Q ss_pred HHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccc
Q 027798 95 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~ 174 (218)
.+.|++-+.+++|+||++...+...+++ +|+..+|+. ..|||+.+.++......++++|+||||+.+|+.++
T Consensus 37 i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~-- 108 (154)
T TIGR01670 37 IRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVM-- 108 (154)
T ss_pred HHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH--
Confidence 4444445679999999999999999999 999887762 13889855555444444556699999999999999
Q ss_pred cccccCccEEEEeCCC
Q 027798 175 EPELDGWNLYLVDWGY 190 (218)
Q Consensus 175 ~~~~aGi~~i~v~~G~ 190 (218)
+++|+. +++.++.
T Consensus 109 --~~ag~~-~~v~~~~ 121 (154)
T TIGR01670 109 --EKVGLS-VAVADAH 121 (154)
T ss_pred --HHCCCe-EecCCcC
Confidence 999996 7776653
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.7e-10 Score=96.71 Aligned_cols=117 Identities=17% Similarity=0.139 Sum_probs=87.9
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcC-CCCCCCeeEeCC--CC----ChHH----HHHHhhh
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAG-VTITPDRLYGLG--TG----PKVN----VLKQLQK 150 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~g-l~~~fd~i~~~~--~~----pKPe----~l~~l~~ 150 (218)
.....++||+..+++.| +.+++++|+.++...+..+++ ++ +...|..++..+ .. |+|+ +++.++.
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~ 166 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGV 166 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCC
Confidence 35678999999999998 469999999999999999988 77 888888877632 21 6666 6666776
Q ss_pred cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 151 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
.+ |+.|++++|++.++++| ++|||++|++... . ........+. +.++++.++
T Consensus 167 ~~---~~k~lVfeds~~Gv~aa----~aagm~vi~v~~~-~-~~~~~~~~~~--~~~~~~~~~ 218 (222)
T KOG2914|consen 167 PP---PSKCLVFEDSPVGVQAA----KAAGMQVVGVATP-D-LSNLFSAGAT--LILESLEDF 218 (222)
T ss_pred CC---ccceEEECCCHHHHHHH----HhcCCeEEEecCC-C-cchhhhhccc--eeccccccc
Confidence 65 46699999999999999 9999999999761 1 1112223333 555566554
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.2e-10 Score=91.23 Aligned_cols=116 Identities=11% Similarity=0.103 Sum_probs=83.1
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCC--eeE------eC-C--CC-ChHHHHHHhhhc
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPD--RLY------GL-G--TG-PKVNVLKQLQKK 151 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd--~i~------~~-~--~~-pKPe~l~~l~~~ 151 (218)
....++||+.++|+.++ .+++|+||+....++.++++ +|+..+|. ..+ +. . .. +|..+++.+...
T Consensus 65 ~~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~ 143 (203)
T TIGR02137 65 ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 143 (203)
T ss_pred HhCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence 34579999999999874 49999999999999999999 99998885 222 11 1 11 445577777543
Q ss_pred CCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCC-CceEEechhhHhhhc
Q 027798 152 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASM-PRIQLLQLSDFCTKL 217 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~-~~i~~~~l~el~~~~ 217 (218)
.. +|+||||+.+|+.++ +.||+.++... ++......++ +.+ .+..||.+.+
T Consensus 144 ~~----~~v~vGDs~nDl~ml----~~Ag~~ia~~a-----k~~~~~~~~~~~~~--~~~~~~~~~~ 195 (203)
T TIGR02137 144 YY----RVIAAGDSYNDTTML----SEAHAGILFHA-----PENVIREFPQFPAV--HTYEDLKREF 195 (203)
T ss_pred CC----CEEEEeCCHHHHHHH----HhCCCCEEecC-----CHHHHHhCCCCCcc--cCHHHHHHHH
Confidence 33 499999999999999 99999876542 2333333333 333 4788877654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.1e-11 Score=100.44 Aligned_cols=92 Identities=24% Similarity=0.317 Sum_probs=76.0
Q ss_pred CCCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC-CCC-ChHH------HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-GTG-PKVN------VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~-~~~-pKPe------~l~~l~~~~~~~~ 156 (218)
....+++.++|+.|+ ..++|+||-....- .++.. +|+..+||+|+.| +.+ .||| +++.++++|++
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee-- 187 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEE-- 187 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHH--
Confidence 467788889999884 48999999997665 77787 9999999999876 455 5554 77888877666
Q ss_pred CceEEEcCch-hhHHhccccccccCccEEEEeCC
Q 027798 157 LRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 157 ~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
|++|||+. +|+++| +++||+++.|...
T Consensus 188 --~vhIgD~l~nD~~gA----~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 188 --CVHIGDLLENDYEGA----RNLGWHAILVDNS 215 (237)
T ss_pred --eEEecCccccccHhH----HHcCCEEEEEccc
Confidence 99999996 689999 9999999999754
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.1e-10 Score=110.09 Aligned_cols=113 Identities=18% Similarity=0.221 Sum_probs=90.9
Q ss_pred cCCCcccHHHHHHhc---C-CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEE
Q 027798 87 ANRLYPGVSDALKLA---S-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~-~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~ 161 (218)
...++||+.++|+.| + .+++|+||+++..++.++++ +|+..+|..+ .. +|++.+++++..++. |+|
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~----~p~~K~~~v~~l~~~~~~----v~~ 452 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAEL----LPEDKLAIVKELQEEGGV----VAM 452 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccC----CHHHHHHHHHHHHHcCCE----EEE
Confidence 357999999999988 6 79999999999999999999 9998777643 22 678899998876555 999
Q ss_pred EcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 162 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 162 IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|||+.+|+.++ ++|| +++.||.++ +.....++.++.-.++..+...+
T Consensus 453 vGDg~nD~~al----~~A~---vgia~g~~~--~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 453 VGDGINDAPAL----AAAD---VGIAMGAGS--DVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred EECChhHHHHH----hhCC---EeEEeCCCC--HHHHHhCCEEEeCCCHHHHHHHH
Confidence 99999999999 9999 688888543 33345677666655787776654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.8e-10 Score=92.24 Aligned_cols=117 Identities=12% Similarity=0.199 Sum_probs=79.9
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC---CeeEeCCCC----C--------------hH
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP---DRLYGLGTG----P--------------KV 142 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f---d~i~~~~~~----p--------------KP 142 (218)
...++||+.++|+.+ +.+++|+|++....++.++++ ++...+| +.+++.+.. | |.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 468999999999988 469999999999999999998 7554443 233332211 3 34
Q ss_pred HHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 143 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 143 e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.++++++..++. ++||||+.+|+.+| ++||+ +.+. ++ ..........+.+.+.+..|+.+.|
T Consensus 147 ~~l~~~~~~~~~----~i~iGDg~~D~~~a----~~Ad~--~~ar-~~--l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 147 SLIRKLSEPNDY----HIVIGDSVTDVEAA----KQSDL--CFAR-DY--LLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred HHHHHHhhcCCc----EEEEeCCHHHHHHH----HhCCe--eEeh-HH--HHHHHHHcCCCccCcCCHHHHHHHH
Confidence 577777765554 99999999999999 99998 2222 21 1111122222456667888876654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.7e-10 Score=92.99 Aligned_cols=79 Identities=19% Similarity=0.196 Sum_probs=64.7
Q ss_pred HHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccc
Q 027798 96 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 96 e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~ 175 (218)
..|+..+.+++|+||++...++..+++ +|+..+|+.+ .|||+.+..+......++++|+||||+.+|+.++
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~--- 114 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMM--- 114 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHH---
Confidence 456666889999999999999999999 9999888743 3889855555554455566699999999999999
Q ss_pred ccccCccEE
Q 027798 176 PELDGWNLY 184 (218)
Q Consensus 176 ~~~aGi~~i 184 (218)
+.+|+.++
T Consensus 115 -~~ag~~~a 122 (169)
T TIGR02726 115 -KRVGLAVA 122 (169)
T ss_pred -HHCCCeEE
Confidence 99998654
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.9e-10 Score=90.76 Aligned_cols=106 Identities=17% Similarity=0.207 Sum_probs=73.6
Q ss_pred HHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccc
Q 027798 96 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 96 e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~ 175 (218)
..|+..+.+++|+||++...+..++++ +|+..+|+ +.+ +||+.+..+..+...++++|+||||+.+|+.+|
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g~~--~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a--- 128 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---GQS--NKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVM--- 128 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---CCC--cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH---
Confidence 344555789999999999999999999 99987775 222 788855444444444555599999999999999
Q ss_pred ccccCccEEEEeCCCCCHHHHHhhcCCCceEE----echhhHhhh
Q 027798 176 PELDGWNLYLVDWGYNTPKERAEAASMPRIQL----LQLSDFCTK 216 (218)
Q Consensus 176 ~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~----~~l~el~~~ 216 (218)
+++|+.+ ++. +..++....+++++.- ..+.||.+.
T Consensus 129 -~~aG~~~-~v~----~~~~~~~~~a~~v~~~~~g~g~~~el~~~ 167 (183)
T PRK09484 129 -EKVGLSV-AVA----DAHPLLLPRADYVTRIAGGRGAVREVCDL 167 (183)
T ss_pred -HHCCCeE-ecC----ChhHHHHHhCCEEecCCCCCCHHHHHHHH
Confidence 9999984 453 2334444556644321 145666554
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.6e-10 Score=106.18 Aligned_cols=115 Identities=16% Similarity=0.211 Sum_probs=90.5
Q ss_pred cCCCcccHHHHHHhc---CC-CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEE
Q 027798 87 ANRLYPGVSDALKLA---SS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 162 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~-~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~I 162 (218)
...++||+.++|+.| |. +++|+||++...++.++++ +|+..+|..+. ..+|++++++++.+.++ ++||
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l~~~~~~----v~~v 431 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKELREKYGP----VAMV 431 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHHHhcCCE----EEEE
Confidence 357999999999988 57 9999999999999999999 99988775331 11778899999876655 9999
Q ss_pred cCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 163 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 163 GDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
||+.+|+.++ ++||+ ++.||+.. .+.....++.++.-.++.++.+.+
T Consensus 432 GDg~nD~~al----~~A~v---gia~g~~~-~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 432 GDGINDAPAL----AAADV---GIAMGASG-SDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred eCCHHHHHHH----HhCCE---EEEeCCCc-cHHHHHhCCEEEECCCHHHHHHHH
Confidence 9999999999 99994 88898642 233344667555446888887654
|
. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.1e-09 Score=88.84 Aligned_cols=95 Identities=16% Similarity=0.141 Sum_probs=77.1
Q ss_pred CCCcccHHHHHHhcCCC-EEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----------ChHH----HHHHhhhcC
Q 027798 88 NRLYPGVSDALKLASSR-IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----------PKVN----VLKQLQKKP 152 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~~~-l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----------pKPe----~l~~l~~~~ 152 (218)
..|=+-.+++|-.|+.+ ..+.||+.+..+.++|++ +||.++||.|++.+.. |.|+ +++..++.
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~- 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID- 176 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC-
Confidence 45666788888888765 999999999999999999 9999999999986522 4445 44555554
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
+|..++||+||..+|++| ++.|+.++.+.-..
T Consensus 177 --~p~~t~FfDDS~~NI~~a----k~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 177 --SPRNTYFFDDSERNIQTA----KEVGLKTVLVGREH 208 (244)
T ss_pred --CcCceEEEcCchhhHHHH----HhccceeEEEEeee
Confidence 255599999999999999 99999999886543
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.6e-10 Score=97.48 Aligned_cols=122 Identities=14% Similarity=0.133 Sum_probs=85.9
Q ss_pred hhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC-------eeE-e---CCC--C-ChHHHHH
Q 027798 84 WIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD-------RLY-G---LGT--G-PKVNVLK 146 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd-------~i~-~---~~~--~-pKPe~l~ 146 (218)
+....+++||+.++|+.| +.+++|+|++...+++.++++ +|+...+. ..+ | .+. . +||++++
T Consensus 176 v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~ 254 (322)
T PRK11133 176 VRENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLT 254 (322)
T ss_pred HHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHH
Confidence 345678999999999877 469999999999999999999 99865332 111 1 121 2 8898666
Q ss_pred HhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 147 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
++..+.+.++++|++|||+.+|+.++ ++||+.++ | ...+ .+ ...++..+...+|..+.-+
T Consensus 255 ~la~~lgi~~~qtIaVGDg~NDl~m~----~~AGlgiA---~-nAkp-~V-k~~Ad~~i~~~~l~~~l~~ 314 (322)
T PRK11133 255 RLAQEYEIPLAQTVAIGDGANDLPMI----KAAGLGIA---Y-HAKP-KV-NEQAQVTIRHADLMGVLCI 314 (322)
T ss_pred HHHHHcCCChhhEEEEECCHHHHHHH----HHCCCeEE---e-CCCH-HH-HhhCCEEecCcCHHHHHHH
Confidence 66555555666699999999999999 99998554 3 1233 33 3456666665566665443
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.97 E-value=5e-09 Score=85.56 Aligned_cols=114 Identities=18% Similarity=0.201 Sum_probs=82.4
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCe-e
Q 027798 58 WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDR-L 133 (218)
Q Consensus 58 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~-i 133 (218)
.|++.+++.....++.+.+. ...++||+.++|+.+ +.+++|+|++....++.++++ +|+..+|.. +
T Consensus 65 ~g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l 134 (202)
T TIGR01490 65 AGLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRL 134 (202)
T ss_pred cCCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecce
Confidence 36777766666555443321 236899999999876 469999999999999999999 999887754 2
Q ss_pred EeCCC-------------C-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEE
Q 027798 134 YGLGT-------------G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 134 ~~~~~-------------~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
...++ + +|++.++++..+.+.++++|++||||.+|+.++ +.+|..++.
T Consensus 135 ~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~----~~a~~~~~v 196 (202)
T TIGR01490 135 EESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLL----SLVGHPYVV 196 (202)
T ss_pred EEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHH----HhCCCcEEe
Confidence 22111 1 455556665444455566799999999999999 999987643
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.9e-09 Score=100.59 Aligned_cols=111 Identities=17% Similarity=0.220 Sum_probs=85.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..++||+.++|+.| +.+++|+||+++..++.++++ +|+. +++.-.. +|++.+++++.+++. |+|||
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~~~~~----v~~VG 473 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQEKGRV----VAMVG 473 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHHcCCE----EEEEe
Confidence 46899999999987 469999999999999999999 9995 3333222 777888888875555 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+.+|+.++ ++||+ ++.||+++ +.....++.++.-.++.++...+
T Consensus 474 Dg~nD~~al----~~A~v---gia~g~g~--~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 474 DGINDAPAL----AQADV---GIAIGAGT--DVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred CCCccHHHH----hhCCE---EEEeCCcC--HHHHhhCCEEEeCCCHHHHHHHH
Confidence 999999999 99995 67888664 34444566444334777766544
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.8e-09 Score=95.85 Aligned_cols=92 Identities=12% Similarity=0.155 Sum_probs=74.0
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhc-C-------CCCCCCeeEeCCCCC------hH-------
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELA-G-------VTITPDRLYGLGTGP------KV------- 142 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~-g-------l~~~fd~i~~~~~~p------KP------- 142 (218)
.+.++||+.++|+.| |++++|+||++...++.+|+. + | +.++||.|+++...| +|
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 356799999999988 469999999999999999999 6 7 899999999865321 01
Q ss_pred ------H------------------HHHHhhhcCCCCCCceEEEcCch-hhHHhcccccc-ccCccEEEEe
Q 027798 143 ------N------------------VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPE-LDGWNLYLVD 187 (218)
Q Consensus 143 ------e------------------~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~-~aGi~~i~v~ 187 (218)
. ..+.++.++ ++++||||.. .|+.+| + .+||.+++|.
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~----~~vlYvGD~i~~Di~~~----kk~~Gw~TvlI~ 323 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRG----KEVLYFGDHIYGDLLRS----KKKRGWRTAAII 323 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCC----CcEEEECCcchHHHHhh----HHhcCcEEEEEc
Confidence 0 334445444 4599999997 599999 8 8999999996
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=4e-10 Score=96.15 Aligned_cols=71 Identities=17% Similarity=0.120 Sum_probs=54.2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
|+|+++.........++++|+||||+. +|+.+| +++|+++++|.||+.+.+++......|.+.+.++.+|.
T Consensus 175 P~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A----~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAG----FQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHH----HHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 777744444333344566699999997 899999 99999999999999998887653344557777998873
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.6e-08 Score=83.61 Aligned_cols=153 Identities=16% Similarity=0.171 Sum_probs=93.5
Q ss_pred CCCHHHH---HHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeC
Q 027798 37 GLTVEGI---LENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTS 110 (218)
Q Consensus 37 ~~s~~~i---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn 110 (218)
.+|.+|. +..|......++...+++.+.+.+.+.+ ....+.||+.++|+.| +.+++|+|+
T Consensus 80 ~~~~~eK~~~m~eWw~k~~~l~~~~~~~~e~i~~~v~~--------------~~l~l~pG~~efl~~L~~~GIpv~IvS~ 145 (277)
T TIGR01544 80 VLTVEEKYPYMVEWWTKSHGLLVQQAFPKAKIKEIVAE--------------SDVMLKDGYENFFDKLQQHSIPVFIFSA 145 (277)
T ss_pred CCChHHhhhHHHHHHHHHHHHHhcCCCCHHHHHHHHhh--------------cCCccCcCHHHHHHHHHHCCCcEEEEeC
Confidence 3444443 4555555556666666665544433321 2468999999999987 469999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCeeEe------CCC---C-C--------hHH-HHHHhhhcCC--CCCCceEEEcCchhhH
Q 027798 111 NQSRFVETLLRELAGVTITPDRLYG------LGT---G-P--------KVN-VLKQLQKKPE--HQGLRLHFVEDRLATL 169 (218)
Q Consensus 111 ~~~~~~~~~L~~~~gl~~~fd~i~~------~~~---~-p--------KPe-~l~~l~~~~~--~~~~e~l~IGDs~~Di 169 (218)
+....++.+|++ +|+...+..|++ .+. + + |.+ ++.......+ .+++.|++|||+.+|+
T Consensus 146 G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl 224 (277)
T TIGR01544 146 GIGNVLEEVLRQ-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDL 224 (277)
T ss_pred CcHHHHHHHHHH-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhh
Confidence 999999999999 999877777733 221 1 2 333 3322211111 3455699999999999
Q ss_pred Hhcccccccc-Cc-cEEEEeCCCCCHHH-HHhhcCCCceEEe
Q 027798 170 KNVIKEPELD-GW-NLYLVDWGYNTPKE-RAEAASMPRIQLL 208 (218)
Q Consensus 170 ~aA~~~~~~a-Gi-~~i~v~~G~~~~~~-l~~~~~~~~i~~~ 208 (218)
.|| ... +. .++-+.+=....++ +..+...+.|.+.
T Consensus 225 ~ma----~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~ 262 (277)
T TIGR01544 225 RMA----DGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 262 (277)
T ss_pred hHh----cCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence 999 433 21 22222222233344 4445555556544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.2e-10 Score=96.61 Aligned_cols=120 Identities=15% Similarity=0.150 Sum_probs=72.9
Q ss_pred CCcccHHHHHHhcC-CCEEEEeCCchHHHHH--HH-HHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceE
Q 027798 89 RLYPGVSDALKLAS-SRIYIVTSNQSRFVET--LL-RELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 89 ~l~~gv~e~L~~L~-~~l~IvTn~~~~~~~~--~L-~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l 160 (218)
..|+.+...+..+. ....|+||.+...... .+ .. -.+...++.+.+.+.. |+|++++.+....+.++++++
T Consensus 121 ~~y~~l~~a~~~l~~g~~~i~tN~D~~~~~~~~~~~~~-G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 199 (249)
T TIGR01457 121 IDYEKFATATLAIRKGAHFIGTNGDLAIPTERGLLPGN-GSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETL 199 (249)
T ss_pred CCHHHHHHHHHHHHCCCeEEEECCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEE
Confidence 35555555555552 2347888877643311 00 11 1112233444454432 666644444333334555599
Q ss_pred EEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 161 FVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 161 ~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
||||+. +|+.+| +++|+++++|.||+.+.+++......|.+.+.++.+|
T Consensus 200 ~VGD~~~~Di~~a----~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 200 MVGDNYLTDIRAG----IDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EECCCchhhHHHH----HHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 999997 899999 9999999999999998877655333444666677664
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.2e-10 Score=93.16 Aligned_cols=91 Identities=12% Similarity=0.076 Sum_probs=67.3
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCee--EeCCCC----ChHHHHHHhhhcCCC-CCCceE
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRL--YGLGTG----PKVNVLKQLQKKPEH-QGLRLH 160 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i--~~~~~~----pKPe~l~~l~~~~~~-~~~e~l 160 (218)
|+++.++|+.+ +.++ |+||++.......+.. +|...+|..+ .|.+.. |+|+++.....+.+. ++++|+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 78999999875 3466 9999999888777787 8888888765 555432 666644333222222 234599
Q ss_pred EEcCc-hhhHHhccccccccCccEEEEe
Q 027798 161 FVEDR-LATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 161 ~IGDs-~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
||||+ .+|+.+| +++|+++++|.
T Consensus 218 ~vGD~~~~Di~~a----~~~G~~~i~v~ 241 (242)
T TIGR01459 218 MVGDSFYTDILGA----NRLGIDTALVL 241 (242)
T ss_pred EECCCcHHHHHHH----HHCCCeEEEEe
Confidence 99999 5999999 99999999985
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.8e-08 Score=80.15 Aligned_cols=86 Identities=22% Similarity=0.294 Sum_probs=67.4
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~~~~~~~e~l 160 (218)
...-|.+.+-+..+ +.++.|+||+++..+....++ +|+ ++|+.+-- |-+- ++++++.++++ |+
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v----~fi~~A~K-P~~~~fr~Al~~m~l~~~~----vv 114 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGV----PFIYRAKK-PFGRAFRRALKEMNLPPEE----VV 114 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCC----ceeecccC-ccHHHHHHHHHHcCCChhH----EE
Confidence 34556777777766 569999999999999999999 886 55655543 4343 66666665555 99
Q ss_pred EEcCch-hhHHhccccccccCccEEEEe
Q 027798 161 FVEDRL-ATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 161 ~IGDs~-~Di~aA~~~~~~aGi~~i~v~ 187 (218)
||||.. +|+.+| +.+||.+|.|.
T Consensus 115 mVGDqL~TDVlgg----nr~G~~tIlV~ 138 (175)
T COG2179 115 MVGDQLFTDVLGG----NRAGMRTILVE 138 (175)
T ss_pred EEcchhhhhhhcc----cccCcEEEEEE
Confidence 999997 799999 99999999995
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.7e-08 Score=78.50 Aligned_cols=86 Identities=21% Similarity=0.232 Sum_probs=66.3
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-------------C--C-ChHHHHH
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------------T--G-PKVNVLK 146 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-------------~--~-pKPe~l~ 146 (218)
+...++||+.++|+.+ +.+++|+|++....++..+++ +|+...|...+..+ . + .|+.+++
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 4567899999999977 469999999999999999999 99987664432221 1 1 5667777
Q ss_pred HhhhcCCCCCCceEEEcCchhhHHhc
Q 027798 147 QLQKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
++......++++++||||+.+|+.++
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~~ 174 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPML 174 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHHH
Confidence 66544444566699999999999998
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=98.82 E-value=7e-09 Score=91.46 Aligned_cols=86 Identities=15% Similarity=0.109 Sum_probs=69.5
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHH---hcCCCCCCCeeEeCCCCChHH----HHHHhhhcCCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRE---LAGVTITPDRLYGLGTGPKVN----VLKQLQKKPEHQGL 157 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~---~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~~~~~~~ 157 (218)
..+|+|+.++|+.| |+.++|+||++...+...+++ .+++.++|+.+.+... |||+ +++++++.++.
T Consensus 30 ~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~~-pk~~~i~~~~~~l~i~~~~--- 105 (320)
T TIGR01686 30 SPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINWG-PKSESLRKIAKKLNLGTDS--- 105 (320)
T ss_pred CccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEecC-chHHHHHHHHHHhCCCcCc---
Confidence 35799999999988 469999999999999999974 1467788998876633 8998 55666665555
Q ss_pred ceEEEcCchhhHHhccccccccCcc
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
++||||++.|+.++ ++++-.
T Consensus 106 -~vfidD~~~d~~~~----~~~lp~ 125 (320)
T TIGR01686 106 -FLFIDDNPAERANV----KITLPV 125 (320)
T ss_pred -EEEECCCHHHHHHH----HHHCCC
Confidence 99999999999999 886653
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=98.81 E-value=9.1e-09 Score=83.99 Aligned_cols=81 Identities=22% Similarity=0.395 Sum_probs=65.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC--CChHH----HHHHhhhcCCCCCCc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--GPKVN----VLKQLQKKPEHQGLR 158 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~--~pKPe----~l~~l~~~~~~~~~e 158 (218)
..++||+.++|+.| |++++|+|+.+...+..+.+. +|| ++.++.++. .|.|. +++.++.+++.
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi---~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~---- 197 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGI---FDSIVFARVIGKPEPKIFLRIIKELQVKPGE---- 197 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTS---CSEEEEESHETTTHHHHHHHHHHHHTCTGGG----
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccc-ccc---ccccccccccccccchhHHHHHHHHhcCCCE----
Confidence 47899999999988 468999999999999999999 998 444333333 34444 77777766665
Q ss_pred eEEEcCchhhHHhccccccccC
Q 027798 159 LHFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aG 180 (218)
|+||||+.+|+.|+ ++||
T Consensus 198 v~~vGDg~nD~~al----~~Ag 215 (215)
T PF00702_consen 198 VAMVGDGVNDAPAL----KAAG 215 (215)
T ss_dssp EEEEESSGGHHHHH----HHSS
T ss_pred EEEEccCHHHHHHH----HhCc
Confidence 99999999999999 9886
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.2e-08 Score=79.71 Aligned_cols=99 Identities=26% Similarity=0.246 Sum_probs=74.1
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCCCCeeEeCC----CC-----
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG----TG----- 139 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~fd~i~~~~----~~----- 139 (218)
...+.||+.++|..| +.++.|+||.+. +.....|+. .|. .||.|+-.. ..
T Consensus 29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRK 105 (181)
T COG0241 29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRK 105 (181)
T ss_pred HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccC
Confidence 357899999999877 579999999654 345555665 565 677776431 11
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 192 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~ 192 (218)
|||.++..+..+...++++.+||||+..|+++| .++|+..+.+..|...
T Consensus 106 P~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a----~n~gi~~~~~~~~~~~ 154 (181)
T COG0241 106 PKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAA----ENAGIKGVLVLTGIGV 154 (181)
T ss_pred CChHHHHHHHHHhCCCccceEEecCcHHHHHHH----HHCCCCceEEEcCccc
Confidence 777766666555556777799999999999999 9999998888776554
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.3e-08 Score=100.18 Aligned_cols=112 Identities=15% Similarity=0.151 Sum_probs=89.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..++||+.+.|+.| +++++++|+.+...++.++++ +|+..+|. .-.. +|++++++++.+++. ++|||
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~----~~~p~~K~~~i~~l~~~~~~----v~~vG 719 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIA----GVLPDGKAEAIKRLQSQGRQ----VAMVG 719 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEe----CCCHHHHHHHHHHHhhcCCE----EEEEe
Confidence 47899999999887 569999999999999999999 99975443 2222 688899999876555 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+.+|+.++ ++||+ ++.||+++...+. .++.++...++.++...+
T Consensus 720 Dg~nD~~al----~~Agv---gia~g~g~~~a~~--~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 720 DGINDAPAL----AQADV---GIAMGGGSDVAIE--TAAITLMRHSLMGVADAL 764 (834)
T ss_pred CCHHHHHHH----HhCCe---eEEecCCCHHHHH--hCCEEEecCCHHHHHHHH
Confidence 999999999 99998 7788877765553 455556666888777654
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.5e-08 Score=94.69 Aligned_cols=85 Identities=24% Similarity=0.368 Sum_probs=66.4
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCch------------HHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhh
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQK 150 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~------------~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~ 150 (218)
+||||.+.|+.| |++++|+||++. ..+..+|++ +|+. |+.++|.+.. |+|.++..+..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 799999999998 579999999988 468889999 8884 8888887543 66665544433
Q ss_pred cC----CCCCCceEEEcCchhhHHhccccccccCc
Q 027798 151 KP----EHQGLRLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 151 ~~----~~~~~e~l~IGDs~~Di~aA~~~~~~aGi 181 (218)
+. ..++++++||||+..|+++| +++|-
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g----~~ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANG----KAAGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHH----HhcCC
Confidence 32 35667799999999999888 77765
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.7e-08 Score=79.59 Aligned_cols=91 Identities=11% Similarity=-0.004 Sum_probs=75.0
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCC-CCCeeEeCCCC--ChHH---HHHHhhhcCCCCCCce
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVN---VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~-~fd~i~~~~~~--pKPe---~l~~l~~~~~~~~~e~ 159 (218)
+..-||+.++|+.+. ..++|.|++++.+++.++++ ++... +|+.+++++.. .+|. .+..++..+ +++
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~----~~v 115 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDL----SKV 115 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCCEEeEchhcCCCh----hhE
Confidence 457799999999984 59999999999999999999 99875 99999988765 3444 555666544 449
Q ss_pred EEEcCchhhHHhccccccccCccEEEEe
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
|||||++.|+.++ ..+|+.+....
T Consensus 116 IiVDD~~~~~~~~----~~NgI~i~~f~ 139 (162)
T TIGR02251 116 IIIDNSPYSYSLQ----PDNAIPIKSWF 139 (162)
T ss_pred EEEeCChhhhccC----ccCEeecCCCC
Confidence 9999999999999 99999876554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.5e-07 Score=87.38 Aligned_cols=89 Identities=13% Similarity=0.154 Sum_probs=70.7
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC------ChHHHHHHhhhcCCCCCCc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG------PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~------pKPe~l~~l~~~~~~~~~e 158 (218)
.+++||+.+.|+++ |.+++|+||+++..++.++++ +|+ ||.++|++.. +|++.+.+.. ..+ +
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l-~~~----~ 141 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALVEAF-GER----G 141 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHHHHh-Ccc----C
Confidence 45789999999987 469999999999999999999 987 8999998753 3455443321 122 3
Q ss_pred eEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 159 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
++|+||+.+|+.++ +.+| ..+.|+-+-
T Consensus 142 ~~yvGDS~~Dlp~~----~~A~-~av~Vn~~~ 168 (479)
T PRK08238 142 FDYAGNSAADLPVW----AAAR-RAIVVGASP 168 (479)
T ss_pred eeEecCCHHHHHHH----HhCC-CeEEECCCH
Confidence 89999999999999 9999 777786543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.8e-07 Score=79.11 Aligned_cols=85 Identities=16% Similarity=0.318 Sum_probs=62.8
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHH--HHHHHhcCCCC-CCCeeEeCCCCChHHHHHHhhhcCCCCCCce
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVE--TLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~--~~L~~~~gl~~-~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~ 159 (218)
+...+|||+.++|+.| +++++|+||+++.... ..|++ +|+.. +|+.|++++... .+.+.....+...+|+++
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~~-~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEIA-VQMILESKKRFDIRNGII 98 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHHH-HHHHHhhhhhccCCCceE
Confidence 3457899999999988 4699999999988766 78899 99998 999999987531 232322211112234559
Q ss_pred EEEcCchhhHHhc
Q 027798 160 HFVEDRLATLKNV 172 (218)
Q Consensus 160 l~IGDs~~Di~aA 172 (218)
+||||+..|++..
T Consensus 99 ~~vGd~~~d~~~~ 111 (242)
T TIGR01459 99 YLLGHLENDIINL 111 (242)
T ss_pred EEeCCcccchhhh
Confidence 9999999888765
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.8e-07 Score=90.52 Aligned_cols=116 Identities=17% Similarity=0.238 Sum_probs=87.0
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEe-----------------------CCCC-Ch
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-----------------------LGTG-PK 141 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~-----------------------~~~~-pK 141 (218)
+++||+.++++.| |+++.++|+.+...+..+.+. +|+...++.+++ +... .|
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 7899999999987 579999999999999999999 999877664432 2221 23
Q ss_pred HHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 142 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
-.+++.++...+. +.||||+.+|..|. ++|+ +++.+|++ ..+.....++.++.-.|+..+...+
T Consensus 607 ~~iv~~lq~~g~~----v~mvGDGvND~pAl----~~Ad---VGia~g~~-g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 607 MKIVKALQKRGDV----VAMTGDGVNDAPAL----KLAD---IGVAMGQT-GTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHHCCCE----EEEECCCcccHHHH----HhCC---eeEecCCC-cCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 2377888765555 99999999999999 9999 47788864 3344445667444435688877654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=98.47 E-value=7.5e-07 Score=71.82 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=64.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEe-CCchHHHHHHHHHhcCCC----------CCCCeeEeCCCCChHH----HHHH
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVT-SNQSRFVETLLRELAGVT----------ITPDRLYGLGTGPKVN----VLKQ 147 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvT-n~~~~~~~~~L~~~~gl~----------~~fd~i~~~~~~pKPe----~l~~ 147 (218)
+...+||+|.++|+.| |.+++++| +...+.++.+|+. +++. ++|+..--... +|-. +.+.
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~~g-sK~~Hf~~i~~~ 119 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIYPG-SKTTHFRRIHRK 119 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEESSS--HHHHHHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhheecC-chHHHHHHHHHh
Confidence 4568999999999988 56999999 5566799999999 9999 88887543332 5555 4445
Q ss_pred hhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 148 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
.++++++ ++|++|...+++.. ++.|+.++.|..|-+
T Consensus 120 tgI~y~e----MlFFDDe~~N~~~v----~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 120 TGIPYEE----MLFFDDESRNIEVV----SKLGVTCVLVPDGLT 155 (169)
T ss_dssp H---GGG----EEEEES-HHHHHHH----HTTT-EEEE-SSS--
T ss_pred cCCChhH----EEEecCchhcceee----EecCcEEEEeCCCCC
Confidence 5665555 99999999999999 889999999988754
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=9.6e-07 Score=86.13 Aligned_cols=110 Identities=14% Similarity=0.170 Sum_probs=85.9
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.+++||+.++|+.| |++++++|+.+...++.+.++ +|+..+++ ... .|++++++++. ++. +.|||
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~-----~~p~~K~~~v~~l~~-~~~----v~mvG 635 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG-----LLPEDKVKAVTELNQ-HAP----LAMVG 635 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC-----CCHHHHHHHHHHHhc-CCC----EEEEE
Confidence 47899999999987 579999999999999999999 99963322 222 68889999873 334 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+.+|..+. ++|+ +++.+|.++..... .++.++.-.++.+|.+.+
T Consensus 636 DgiNDapAl----~~A~---vgia~g~~~~~a~~--~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 636 DGINDAPAM----KAAS---IGIAMGSGTDVALE--TADAALTHNRLRGLAQMI 680 (741)
T ss_pred CCHHhHHHH----HhCC---eeEEecCCCHHHHH--hCCEEEecCCHHHHHHHH
Confidence 999999999 9999 67778877654433 356666666888877654
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.6e-06 Score=72.57 Aligned_cols=81 Identities=19% Similarity=0.212 Sum_probs=65.4
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCch---HHHHHHHHHhcCCCC-CCCeeEeCCCC-ChHHHHHHhhhcCCCCCCc
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQS---RFVETLLRELAGVTI-TPDRLYGLGTG-PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~---~~~~~~L~~~~gl~~-~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e 158 (218)
...++||+.++|+.+ |.+++|+||++. +.+...|++ +|+.. .++.++..+.. +|+...+.+......
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 457999999999977 569999999884 445588888 99975 45778877655 888877777667777
Q ss_pred eEEEcCchhhHHhc
Q 027798 159 LHFVEDRLATLKNV 172 (218)
Q Consensus 159 ~l~IGDs~~Di~aA 172 (218)
++||||+..|+.++
T Consensus 191 vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 VLLFGDNLLDFDDF 204 (266)
T ss_pred EEEECCCHHHhhhh
Confidence 99999999999776
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.2e-05 Score=67.00 Aligned_cols=93 Identities=17% Similarity=0.234 Sum_probs=74.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--------------ChHHHHHHhhh
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--------------PKVNVLKQLQK 150 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--------------pKPe~l~~l~~ 150 (218)
..++||+.++++.+ |.+++|+|++....++.+.+. +|++..+...+..+++ .|-+.++++..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 78999999998877 579999999999999999999 9998776554432211 35557777666
Q ss_pred cCCCCCCceEEEcCchhhHHhccccccccCccEEE
Q 027798 151 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
+.+.++++++++|||.+|+-+= +.+|.+.+.
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml----~~ag~~ia~ 185 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPML----EAAGLPIAV 185 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHH----HhCCCCeEe
Confidence 6666677799999999999999 999987553
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=98.22 E-value=3.2e-05 Score=65.52 Aligned_cols=108 Identities=19% Similarity=0.248 Sum_probs=81.1
Q ss_pred hcCCCcccHHHHHHhc-----CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-----CC-----C----------
Q 027798 86 GANRLYPGVSDALKLA-----SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG-----P---------- 140 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L-----~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-----~~-----p---------- 140 (218)
...++.||+.++++.+ +..+.|+|.+..-+++.+|++ .|+...|+.|++.. .+ |
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~ 146 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCP 146 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCC
Confidence 4568999999999988 348999999999999999999 99999999999752 22 1
Q ss_pred ----hHHHHHHhhhcC---CCCCCceEEEcCchhhHHhccccccccCc-cEEEEeCCCCCHHHHHh
Q 027798 141 ----KVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGW-NLYLVDWGYNTPKERAE 198 (218)
Q Consensus 141 ----KPe~l~~l~~~~---~~~~~e~l~IGDs~~Di~aA~~~~~~aGi-~~i~v~~G~~~~~~l~~ 198 (218)
|-.+++++.... +..-++++||||+.+|+=.+ .+.+- +.+...-||.-...+..
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~----~~L~~~D~v~~R~~~~l~~~i~~ 208 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA----LRLRPRDVVFPRKGYPLHKLIQK 208 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc----cccCCCCEEecCCCChHHHHHhc
Confidence 222666665431 22235699999999999999 65443 67778888875444433
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.3e-06 Score=77.04 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=43.8
Q ss_pred CCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 156 GLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 156 ~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++++||||++ +||.+| +++||.+++|.+|-.+.++. .....|.+.+.++.|+++.|
T Consensus 263 ~~~~~mIGD~~~tDI~ga----~~~G~~silV~tG~~~~~~~-~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 263 FHALYMVGDNPASDIIGA----QNYGWFSCLVKTGVYNGGDD-LKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred hheEEEEcCChhhhhhhH----HhCCceEEEecccccCCCCC-CCCCCCCEEECCHHHHHHHh
Confidence 46799999998 899999 99999999999994433332 11222457777999999876
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.6e-05 Score=63.79 Aligned_cols=108 Identities=13% Similarity=0.075 Sum_probs=73.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHH-Hhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE
Q 027798 59 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDAL-KLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 134 (218)
Q Consensus 59 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L-~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~ 134 (218)
|.+.+++.+....+++.|. ....+|||+.++| +.+ |.+++|+||+++..++.+++. +|+.. .+.++
T Consensus 73 g~~~~~~~~~~~~f~~~~~--------~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~-l~~~~-~~~~i 142 (211)
T PRK11590 73 GHSEARLQALEADFVRWFR--------DNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFD-TPWLP-RVNLI 142 (211)
T ss_pred CCCHHHHHHHHHHHHHHHH--------HhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-ccccc-cCceE
Confidence 5565555555655555442 2256899999999 455 459999999999999999999 88633 44455
Q ss_pred eCC-----CC----------ChHHHHHHh-hhcCCCCCCceEEEcCchhhHHhccccccccCccEE
Q 027798 135 GLG-----TG----------PKVNVLKQL-QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 135 ~~~-----~~----------pKPe~l~~l-~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
|.+ .+ .|...+++. +. +...+.+-|||.+|+..- ..+|-+.+
T Consensus 143 ~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~----~~~~~~aY~Ds~~D~pmL----~~a~~~~~ 200 (211)
T PRK11590 143 ASQMQRRYGGWVLTLRCLGHEKVAQLERKIGT----PLRLYSGYSDSKQDNPLL----YFCQHRWR 200 (211)
T ss_pred EEEEEEEEccEECCccCCChHHHHHHHHHhCC----CcceEEEecCCcccHHHH----HhCCCCEE
Confidence 543 11 233344443 32 334589999999999998 88776543
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=1e-05 Score=62.14 Aligned_cols=115 Identities=15% Similarity=0.269 Sum_probs=85.3
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC-CCCChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-GTGPKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~-~~~pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
-.+|+.|.+.|++|+ .+++|+|+....++....+. .|+. .+.++.. +...|-++++.|+.+.+. |+||||
T Consensus 29 Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~-~gi~--~~rv~a~a~~e~K~~ii~eLkk~~~k----~vmVGn 101 (152)
T COG4087 29 GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEF-VGIP--VERVFAGADPEMKAKIIRELKKRYEK----VVMVGN 101 (152)
T ss_pred cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHH-cCCc--eeeeecccCHHHHHHHHHHhcCCCcE----EEEecC
Confidence 479999999999986 49999999999999999998 8864 3445443 322777799999875555 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..+|+.+= ++|.+-.+-+..+.. ++.+ -..++ +.+.+..|+..++
T Consensus 102 GaND~laL----r~ADlGI~tiq~e~v-~~r~-l~~AD--vvik~i~e~ldl~ 146 (152)
T COG4087 102 GANDILAL----READLGICTIQQEGV-PERL-LLTAD--VVLKEIAEILDLL 146 (152)
T ss_pred CcchHHHh----hhcccceEEeccCCc-chHH-Hhhch--hhhhhHHHHHHHh
Confidence 99999999 998886666654322 2222 23445 5566887776654
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.1e-06 Score=74.10 Aligned_cols=66 Identities=23% Similarity=0.313 Sum_probs=50.7
Q ss_pred HHHHhhhcCCCCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++.++..++ +++||||+. +||.+| +++||.++.|..|..+.+++......|.+...++.++...+
T Consensus 199 al~~~~~~~~----~~~mVGD~~~TDI~~a----~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~ 265 (269)
T COG0647 199 ALEKLGLDRS----EVLMVGDRLDTDILGA----KAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITAL 265 (269)
T ss_pred HHHHhCCCcc----cEEEEcCCchhhHHHH----HHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhh
Confidence 5566665544 599999997 699999 99999999999999988776544333445556888887654
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.7e-05 Score=62.68 Aligned_cols=93 Identities=19% Similarity=0.191 Sum_probs=65.1
Q ss_pred CCCcccHHHHHHhcC---C--CEEEEeCCc-------hHHHHHHHHHhcCCCCCCCeeEeCCCC--ChHHHHHHhhhcC-
Q 027798 88 NRLYPGVSDALKLAS---S--RIYIVTSNQ-------SRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKP- 152 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~---~--~l~IvTn~~-------~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKPe~l~~l~~~~- 152 (218)
..+.|.+.+.+++++ . ++.||||+. ...++.+-+. +|+. .+.-.... +..++++.++...
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~kKP~~~~~i~~~~~~~~~ 132 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAKKPGCFREILKYFKCQKV 132 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCCCCccHHHHHHHHhhccC
Confidence 456777877777763 2 699999983 6677777777 8853 22222211 2234777776541
Q ss_pred CCCCCceEEEcCch-hhHHhccccccccCccEEEEeCC
Q 027798 153 EHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 153 ~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
..+|++++||||.. +|+.+| ..+|+.+|+|+-|
T Consensus 133 ~~~p~eiavIGDrl~TDVl~g----N~~G~~tilv~~g 166 (168)
T PF09419_consen 133 VTSPSEIAVIGDRLFTDVLMG----NRMGSYTILVTDG 166 (168)
T ss_pred CCCchhEEEEcchHHHHHHHh----hccCceEEEEecC
Confidence 13466699999996 799999 9999999999877
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.6e-05 Score=67.59 Aligned_cols=106 Identities=16% Similarity=0.120 Sum_probs=64.6
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCc-----hHHHHHHHHHhcCCCC---CCCeeEeCCCC-ChHHHHHHhhhcCCCCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQ-----SRFVETLLRELAGVTI---TPDRLYGLGTG-PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~-----~~~~~~~L~~~~gl~~---~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~ 157 (218)
.++++.++++.+ +..+.|+|+.+ ....+.+++. +++.. .++.+-....+ .|+.+++.+....+.+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~ 216 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMK 216 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 467777776654 34566777654 2344455565 66541 12222111222 788866666555555666
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCce
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRI 205 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i 205 (218)
++++|||+.+|+.++ +.+|+ +|.+|.+ .++++ ..++.+.
T Consensus 217 e~i~~GD~~NDi~m~----~~ag~---~vamgna-~~~lk-~~Ad~v~ 255 (272)
T PRK10530 217 NVVAFGDNFNDISML----EAAGL---GVAMGNA-DDAVK-ARADLVI 255 (272)
T ss_pred HeEEeCCChhhHHHH----HhcCc---eEEecCc-hHHHH-HhCCEEE
Confidence 799999999999999 99996 5667755 34553 3455433
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.2e-05 Score=78.39 Aligned_cols=115 Identities=17% Similarity=0.194 Sum_probs=81.1
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC--------CC-------------------eeEeCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT--------PD-------------------RLYGLGT 138 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~--------fd-------------------~i~~~~~ 138 (218)
+++|++.++++.+ |+++.++|+.....+..+.++ .|+... ++ .|++...
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 6899999999987 579999999999999999999 998541 11 1222222
Q ss_pred C-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 139 G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 139 ~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
. .|-.+++.++...+. +.|+||+.+|+.|. ++|++ ++.+|.++. .....++.++.-.|+..+.+.+
T Consensus 616 P~~K~~iV~~lq~~g~~----va~iGDG~ND~~al----k~AdV---Gia~g~g~~--~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 616 PSHKSELVELLQEQGEI----VAMTGDGVNDAPAL----KKADI---GIAMGSGTE--VAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHHHHHHHHHHHhcCCe----EEEecCCcchHHHH----HhCCe---eEECCCCcH--HHHHhcCeEEccCCHHHHHHHH
Confidence 1 333477877755444 99999999999999 99998 566665543 3334566444434477776654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.7e-05 Score=63.14 Aligned_cols=81 Identities=16% Similarity=0.178 Sum_probs=60.8
Q ss_pred cCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCC-CCC-CeeEeCCCC--ChHHHHHH-hhhcCCCCCCce
Q 027798 87 ANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGTG--PKVNVLKQ-LQKKPEHQGLRL 159 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~-~~f-d~i~~~~~~--pKPe~l~~-l~~~~~~~~~e~ 159 (218)
.+.++||+.++|+.+. ..++|+||+++.++..+++. ++.. .+| +.|++++.. +...-+.. ++.+. +.+
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~~i~~~d~----~~v 130 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLLRLFPADE----SMV 130 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHHHHcCCCc----ccE
Confidence 4678999999999984 59999999999999999999 9988 588 778887653 22223422 34333 349
Q ss_pred EEEcCchhhHHhc
Q 027798 160 HFVEDRLATLKNV 172 (218)
Q Consensus 160 l~IGDs~~Di~aA 172 (218)
++|+|++.-...-
T Consensus 131 vivDd~~~~~~~~ 143 (156)
T TIGR02250 131 VIIDDREDVWPWH 143 (156)
T ss_pred EEEeCCHHHhhcC
Confidence 9999998554444
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=97.97 E-value=7.7e-06 Score=69.09 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=48.9
Q ss_pred CEEEEeCCchHHHH-HHHHHhcCCCCCCCeeE---eCCC---C-ChHHHHHHhhhcCCCCCCce-EEEcCch-hhHHhcc
Q 027798 104 RIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLGT---G-PKVNVLKQLQKKPEHQGLRL-HFVEDRL-ATLKNVI 173 (218)
Q Consensus 104 ~l~IvTn~~~~~~~-~~L~~~~gl~~~fd~i~---~~~~---~-pKPe~l~~l~~~~~~~~~e~-l~IGDs~-~Di~aA~ 173 (218)
...|+||.+.-... .-... .|+..+|+.+. +... + |+|++++.+..+...+++++ +||||+. +|+.+|
T Consensus 146 ~~~i~tN~d~~~~~~~g~~~-~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A- 223 (236)
T TIGR01460 146 VPFIAANRDDLVRLGDGRFR-PGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGA- 223 (236)
T ss_pred CeEEEECCCCCCCCCCCcEe-ecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHH-
Confidence 46788886631111 11122 34444444332 3332 1 77774444333333344446 9999998 799999
Q ss_pred ccccccCccEEEEeCC
Q 027798 174 KEPELDGWNLYLVDWG 189 (218)
Q Consensus 174 ~~~~~aGi~~i~v~~G 189 (218)
+++|+++++|.||
T Consensus 224 ---~~~G~~~i~v~~G 236 (236)
T TIGR01460 224 ---KNAGFDTLLVLTG 236 (236)
T ss_pred ---HHCCCcEEEEecC
Confidence 9999999999987
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.9e-05 Score=68.50 Aligned_cols=73 Identities=25% Similarity=0.211 Sum_probs=57.2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhh----cCCCceEEechhhHh
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA----ASMPRIQLLQLSDFC 214 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~----~~~~~i~~~~l~el~ 214 (218)
|.+.+++.+..+.+.+|++|+||||+. +||.-| +++|+++++|..|-.+.++.... ...|.+.+..+.++.
T Consensus 225 P~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG----~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~ 300 (306)
T KOG2882|consen 225 PSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFG----KNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLL 300 (306)
T ss_pred CCHHHHHHHHHHcCCCcceEEEEcccchhhhhHh----hccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHh
Confidence 444488888888888999999999998 599999 99999999999999988776554 222445555776665
Q ss_pred hh
Q 027798 215 TK 216 (218)
Q Consensus 215 ~~ 216 (218)
+.
T Consensus 301 ~~ 302 (306)
T KOG2882|consen 301 PL 302 (306)
T ss_pred hh
Confidence 54
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.7e-05 Score=64.65 Aligned_cols=93 Identities=20% Similarity=0.248 Sum_probs=70.0
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchH---------------HHHHHHHHhcCCCCCCCeeEeCCC------------C
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSR---------------FVETLLRELAGVTITPDRLYGLGT------------G 139 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~---------------~~~~~L~~~~gl~~~fd~i~~~~~------------~ 139 (218)
+-|....+++.+ +++++|||=++.. .++..|++ .+.+-..+.+++.-. +
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 456666676665 6799999977663 57888887 777776777775311 1
Q ss_pred ---ChHHH--H--HHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 ---PKVNV--L--KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 ---pKPe~--l--~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
|.|++ . +++..+.+.+|+||+||+|+..++++| ++.|+.++.+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA----~~lGi~ai~f~ 205 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNA----LKEGYIALHVT 205 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHH----HHCCCEEEEcC
Confidence 34444 4 666666677777799999999999999 99999999986
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.2e-05 Score=60.72 Aligned_cols=93 Identities=19% Similarity=0.253 Sum_probs=69.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHh--cCCCCCCCeeEeCCCCChHH------HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLREL--AGVTITPDRLYGLGTGPKVN------VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~--~gl~~~fd~i~~~~~~pKPe------~l~~l~~~~~~~~ 156 (218)
.++||++.+.|++. +.+++|-|+++....+-...+. ..|..+|+..+....++|-| ++...+.+|.+
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~e-- 179 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAE-- 179 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchh--
Confidence 57999999999964 6799999999987766554431 12444444444333334433 78888877777
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeC
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 188 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~ 188 (218)
++|+-|.+..+.|| +.+||.++.+..
T Consensus 180 --ilFLSDn~~EL~AA----~~vGl~t~l~~R 205 (229)
T COG4229 180 --ILFLSDNPEELKAA----AGVGLATGLAVR 205 (229)
T ss_pred --eEEecCCHHHHHHH----Hhcchheeeeec
Confidence 99999999999999 999999988754
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=97.83 E-value=3.5e-05 Score=61.46 Aligned_cols=88 Identities=24% Similarity=0.241 Sum_probs=55.3
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCch--------------HHHHHHHHHhcCCCCCCCeeEeCCC-C-ChHH--HHHHh
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQS--------------RFVETLLRELAGVTITPDRLYGLGT-G-PKVN--VLKQL 148 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~--------------~~~~~~L~~~~gl~~~fd~i~~~~~-~-pKPe--~l~~l 148 (218)
++|+|.+.|++| +..++|+||.+. ..++.+++. +++. +...++... . .||. +...+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 456899999987 569999999732 345666777 6664 333333332 2 5554 77776
Q ss_pred hhcCC----CCCCceEEEcCc-----------hhhHHhccccccccCccEE
Q 027798 149 QKKPE----HQGLRLHFVEDR-----------LATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 149 ~~~~~----~~~~e~l~IGDs-----------~~Di~aA~~~~~~aGi~~i 184 (218)
..+.. .+.++++||||+ -.|.+-| .++|+++.
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA----~N~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFA----LNCGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHH----HHHT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHH----HHcCCccc
Confidence 55443 367789999996 6899999 99999753
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00026 Score=58.85 Aligned_cols=109 Identities=15% Similarity=0.151 Sum_probs=74.3
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHH-hc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCee
Q 027798 58 WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK-LA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRL 133 (218)
Q Consensus 58 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~-~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i 133 (218)
.|.+.+++.+....+.+.|. ....+|||+.++|+ .+ |.+++||||++...++.+.+. .++..- +.+
T Consensus 71 ~g~~~~~l~~~~~~f~~~~~--------~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~-~~~ 140 (210)
T TIGR01545 71 FGHREAHLQDLEADFVAAFR--------DKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHR-LNL 140 (210)
T ss_pred cCCCHHHHHHHHHHHHHHHH--------HhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-cccccc-CcE
Confidence 36776666666666655542 22468999999995 54 569999999999999999987 776443 334
Q ss_pred EeCC----C-C----------ChHHHHHHh-hhcCCCCCCceEEEcCchhhHHhccccccccCccEE
Q 027798 134 YGLG----T-G----------PKVNVLKQL-QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 134 ~~~~----~-~----------pKPe~l~~l-~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
+|.+ . + .|...+++. +. +.+.+.+-|||.+|+..- ..+|-+.+
T Consensus 141 i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~----~~~~~~aYsDS~~D~pmL----~~a~~~~~ 199 (210)
T TIGR01545 141 IASQIERGNGGWVLPLRCLGHEKVAQLEQKIGS----PLKLYSGYSDSKQDNPLL----AFCEHRWR 199 (210)
T ss_pred EEEEeEEeCCceEcCccCCChHHHHHHHHHhCC----ChhheEEecCCcccHHHH----HhCCCcEE
Confidence 4442 1 1 233344443 32 333488999999999998 78776543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00011 Score=58.81 Aligned_cols=77 Identities=18% Similarity=0.338 Sum_probs=55.6
Q ss_pred ccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-----C--------C----hHHHHHHh---
Q 027798 92 PGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----G--------P----KVNVLKQL--- 148 (218)
Q Consensus 92 ~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-----~--------p----KPe~l~~l--- 148 (218)
|++.++|+.+ +.+++|+|+++...++.+++. +|+...+ +++.+. . . |..+++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 4444999765 679999999999999999998 8986422 232211 0 1 88888888
Q ss_pred hhcCCCCCCceEEEcCchhhHHhc
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
... ..+...+++|||+.+|+.++
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~l 191 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPML 191 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHh
Confidence 221 22334499999999999886
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.69 E-value=9.3e-06 Score=67.13 Aligned_cols=66 Identities=20% Similarity=0.272 Sum_probs=48.9
Q ss_pred HHHHhhhcCCCCCCceEEEcCchh-hHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++.++++|++ |+||||..+ |+-+| .+.||..|.|..|--.+.+....++.|....+++.+-+++|
T Consensus 190 al~~~gv~p~~----aVMIGDD~~dDvgGA----q~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I 256 (262)
T KOG3040|consen 190 ALQALGVDPEE----AVMIGDDLNDDVGGA----QACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLI 256 (262)
T ss_pred HHHhcCCChHH----heEEccccccchhhH----hhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHH
Confidence 77777766665 999999986 89999 99999999999986655333334444556666777766554
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.67 E-value=9.4e-05 Score=61.70 Aligned_cols=103 Identities=25% Similarity=0.361 Sum_probs=75.4
Q ss_pred hcCCCcccHHHHHHhcC---C-CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-----CC-----C---------hH
Q 027798 86 GANRLYPGVSDALKLAS---S-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG-----P---------KV 142 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~---~-~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-----~~-----p---------KP 142 (218)
+..+.-||+.++++.+. . .+.|||-.+.-+++..|++ +|+.++|..|++.. .+ | -|
T Consensus 81 r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CP 159 (256)
T KOG3120|consen 81 RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCP 159 (256)
T ss_pred hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCc
Confidence 34678899999999873 3 7889999999999999999 99999999998642 12 1 01
Q ss_pred -H-----HHHHhhh---cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCC
Q 027798 143 -N-----VLKQLQK---KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 192 (218)
Q Consensus 143 -e-----~l~~l~~---~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~ 192 (218)
+ ++.++.. +-+.+-++.+||||+-+|+=.-. +..+.+++...-||.-
T Consensus 160 sNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l---~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 160 SNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVL---RLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcch---hcccCceecccCCCch
Confidence 1 4444422 22333456999999999997763 5556677777778764
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00021 Score=62.83 Aligned_cols=88 Identities=18% Similarity=0.345 Sum_probs=63.5
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCch---HHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQS---RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~---~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~ 161 (218)
..++||+.++|+.| |++++++||++. ......|++ +|+...++.|+++.. ..-..++........ .+|
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~~-~~~~~l~~~~~~~~~----~V~ 116 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSSF-AAAAYLKSINFPKDK----KVY 116 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehHH-HHHHHHHhhccCCCC----EEE
Confidence 46899999999877 579999999994 344445577 899888888887753 112234333322222 699
Q ss_pred EcCchhhHHhccccccccCccEEE
Q 027798 162 VEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 162 IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
|+++..+.+.+ +.+|+.++.
T Consensus 117 viG~~~~~~~l----~~~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEEL----ELAGFQYLG 136 (311)
T ss_pred EEcCHHHHHHH----HHCCCEEec
Confidence 99999999999 999998764
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00013 Score=63.49 Aligned_cols=47 Identities=15% Similarity=0.146 Sum_probs=43.3
Q ss_pred ccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC
Q 027798 92 PGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG 139 (218)
Q Consensus 92 ~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~ 139 (218)
||+.++|++| |.+++|+||+++..+...|++ +||..+|+.|+|++..
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGGHK 198 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECCcc
Confidence 9999999988 569999999999999999999 9999999999998754
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00036 Score=57.77 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=50.9
Q ss_pred CEEE-EeCCchHHHHHHHHHhcCCC----CCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccc
Q 027798 104 RIYI-VTSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 178 (218)
Q Consensus 104 ~l~I-vTn~~~~~~~~~L~~~~gl~----~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~ 178 (218)
.+.+ .+++....+...+++ .++. .+|..|.+.+. .|+.+++.+....+.+++++++|||+.+|+.+- +.
T Consensus 140 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml----~~ 213 (221)
T TIGR02463 140 PLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLL----EV 213 (221)
T ss_pred cEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHH----Hh
Confidence 3444 456666677777877 7765 44544555444 677755555444445566699999999999999 99
Q ss_pred cCccEE
Q 027798 179 DGWNLY 184 (218)
Q Consensus 179 aGi~~i 184 (218)
+|..++
T Consensus 214 ag~~va 219 (221)
T TIGR02463 214 ADYAVV 219 (221)
T ss_pred CCceEE
Confidence 997543
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0011 Score=54.37 Aligned_cols=83 Identities=19% Similarity=0.400 Sum_probs=63.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCC--------CCCe---eEeCC-------CCChHHHH
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTI--------TPDR---LYGLG-------TGPKVNVL 145 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~--------~fd~---i~~~~-------~~pKPe~l 145 (218)
...+-||+.++.+.| +.+++++|++-+..+..+-+. +||.. .||. ..|.+ .+.|++++
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 467889999999988 469999999999999999999 99864 1221 12212 12788888
Q ss_pred HHhhhcCCCCCCceEEEcCchhhHHhc
Q 027798 146 KQLQKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
+.+.. ..+-+.+.||||..+|++|.
T Consensus 165 ~~lrk--~~~~~~~~mvGDGatDlea~ 189 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGATDLEAM 189 (227)
T ss_pred HHHHh--CCChheeEEecCCccccccC
Confidence 87754 33445699999999999998
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00085 Score=54.62 Aligned_cols=87 Identities=18% Similarity=0.320 Sum_probs=63.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC-------CCCCeeE----------eC-CC--C-Ch
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT-------ITPDRLY----------GL-GT--G-PK 141 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~-------~~fd~i~----------~~-~~--~-pK 141 (218)
....+-||.+++.+.. +++..|+|++...++..+++. ++=. .+++.++ .- ++ + .|
T Consensus 70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK 148 (220)
T COG4359 70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK 148 (220)
T ss_pred hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence 4467889999888866 469999999999999999998 5522 2222211 11 11 1 56
Q ss_pred HHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCc
Q 027798 142 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi 181 (218)
|.++..+...++- ++|+||+..|+.|| +....
T Consensus 149 ~~vI~~l~e~~e~----~fy~GDsvsDlsaa----klsDl 180 (220)
T COG4359 149 SSVIHELSEPNES----IFYCGDSVSDLSAA----KLSDL 180 (220)
T ss_pred chhHHHhhcCCce----EEEecCCcccccHh----hhhhh
Confidence 6688888765554 99999999999999 88765
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0002 Score=56.74 Aligned_cols=80 Identities=23% Similarity=0.303 Sum_probs=61.7
Q ss_pred HHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccc
Q 027798 95 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~ 174 (218)
..+|..++++++|+|+.....++.-.+. +|+..+|. |.. .|-.++..+..+....+++|.||||..+|+-.=
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~q---G~~--dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm-- 115 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQ---GIS--DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVM-- 115 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeee---chH--hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHH--
Confidence 3466678999999999999999999999 99976544 333 355555555444455555599999999999999
Q ss_pred cccccCccEE
Q 027798 175 EPELDGWNLY 184 (218)
Q Consensus 175 ~~~~aGi~~i 184 (218)
++.|+.+.
T Consensus 116 --~~vGls~a 123 (170)
T COG1778 116 --EKVGLSVA 123 (170)
T ss_pred --HHcCCccc
Confidence 99998654
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00041 Score=64.01 Aligned_cols=89 Identities=15% Similarity=0.218 Sum_probs=59.4
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcC--------CCCCCCeeEeCCCC--------------------
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAG--------VTITPDRLYGLGTG-------------------- 139 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~g--------l~~~fd~i~~~~~~-------------------- 139 (218)
-|.+..+|+.| |.++.++||++-.+++..++.++| +.++||.|++....
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l 264 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKL 264 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSE
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcc
Confidence 46777777776 569999999999999999998654 45899999864321
Q ss_pred --Ch---H-H------------HHHHhhhcCCCCCCceEEEcCchh-hHHhcccccccc-CccEEEEe
Q 027798 140 --PK---V-N------------VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELD-GWNLYLVD 187 (218)
Q Consensus 140 --pK---P-e------------~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~~~~~~a-Gi~~i~v~ 187 (218)
.+ + + ..+.++.+ +.+++||||+.. ||..+ +.. |+.+++|-
T Consensus 265 ~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~----g~~VLY~GDhi~~Di~~~----k~~~gWrT~~Ii 324 (448)
T PF05761_consen 265 KWGKYVGPLEKGKVYSGGNWDQLHKLLGWR----GKEVLYFGDHIYGDILKS----KKRHGWRTAAII 324 (448)
T ss_dssp ECS---SS--TC-EEEE--HHHHHHHCT------GGGEEEEESSTTTTHHHH----HHHH-SEEEEE-
T ss_pred ccccccccccCCCEeecCCHHHHHHHHccC----CCeEEEECCchhhhhhhh----ccccceEEEEEe
Confidence 11 0 0 33334443 456999999985 99988 555 99999995
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0005 Score=60.04 Aligned_cols=51 Identities=18% Similarity=0.073 Sum_probs=44.9
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChH
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKV 142 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKP 142 (218)
-||+.++|++| |.+++|+||++++.+...|++ +|+..+|+.|+|++.. .|+
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g~i~~k~ 204 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGGRKAGEY 204 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECCCccccc
Confidence 38999999988 569999999999999999999 9999999999998765 444
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0016 Score=62.97 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=78.3
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
.+.||+.+.++.| |+++.++|+.+...+..+-+. +|+.+ +++.-.. .|-+.+++++.+.+. +.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~----v~a~~~PedK~~~v~~lq~~g~~----VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDD----FIAEATPEDKIALIRQEQAEGKL----VAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCE----EEcCCCHHHHHHHHHHHHHcCCe----EEEECC
Confidence 6789999999887 579999999999999999999 99854 3443322 455588888765555 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..||.-+= +.|++- +..|-++... ...++.++.-.|+..+.+.+
T Consensus 517 G~NDapAL----~~AdvG---iAm~~gt~~a--keaadivLldd~~s~Iv~av 560 (675)
T TIGR01497 517 GTNDAPAL----AQADVG---VAMNSGTQAA--KEAANMVDLDSDPTKLIEVV 560 (675)
T ss_pred CcchHHHH----HhCCEe---EEeCCCCHHH--HHhCCEEECCCCHHHHHHHH
Confidence 99999999 899863 3333333322 22334333334676665543
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0014 Score=50.57 Aligned_cols=85 Identities=16% Similarity=0.174 Sum_probs=63.4
Q ss_pred cCCCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHhhhc--CCCCCC
Q 027798 87 ANRLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQLQKK--PEHQGL 157 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~--~~~~~~ 157 (218)
.+.+||.|.++|+.++ .-++.+|-+....+-..|+. +++..||+.++.-...-|-- .++.++.+ -..+|.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcc
Confidence 3579999999999884 57888888888889999999 99999999877654322322 44444433 234678
Q ss_pred ceEEEcCchhhHHhc
Q 027798 158 RLHFVEDRLATLKNV 172 (218)
Q Consensus 158 e~l~IGDs~~Di~aA 172 (218)
+++|++|+.-.+..-
T Consensus 118 ~Ivy~DDR~iH~~~I 132 (164)
T COG4996 118 EIVYLDDRRIHFGNI 132 (164)
T ss_pred eEEEEecccccHHHH
Confidence 899999998665555
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.003 Score=61.26 Aligned_cols=111 Identities=14% Similarity=0.108 Sum_probs=78.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
++.||+.+.+++| |+++.++|+-+...+..+-+. +|+++ +++.-.. .|-+.+++++.+.+. +.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~----v~A~~~PedK~~iV~~lQ~~G~~----VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDD----FLAEATPEDKLALIRQEQAEGRL----VAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcE----EEccCCHHHHHHHHHHHHHcCCe----EEEECC
Confidence 5789999998887 579999999999999999999 99954 4444332 455588888876555 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..||.-|= ++|.+ ++.-|-++. .....+|-++.-.|+..+.+.+
T Consensus 516 GvNDAPAL----a~ADV---GIAMgsGTd--vAkeAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 516 GTNDAPAL----AQADV---GVAMNSGTQ--AAKEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred CcchHHHH----HhCCE---eEEeCCCCH--HHHHhCCEEEeCCCHHHHHHHH
Confidence 99999888 88876 333333333 2233444333333677766544
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0014 Score=54.33 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=51.0
Q ss_pred CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC---C---CC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccc
Q 027798 104 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGL---G---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 176 (218)
Q Consensus 104 ~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~---~---~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~ 176 (218)
.+.+.++...+.+...+++ ++. .+..+.+. + .+ +|+.+++.+......+++++++|||+.+|+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~--~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~---- 189 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGL--DLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMF---- 189 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCC--cEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHH----
Confidence 3456667777777888887 654 22222221 1 11 688866666555555666799999999999999
Q ss_pred cccCccEEEEe
Q 027798 177 ELDGWNLYLVD 187 (218)
Q Consensus 177 ~~aGi~~i~v~ 187 (218)
+.+|+.+ ++.
T Consensus 190 ~~ag~~v-am~ 199 (230)
T PRK01158 190 EVAGFGV-AVA 199 (230)
T ss_pred HhcCceE-Eec
Confidence 9999854 444
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0037 Score=60.82 Aligned_cols=111 Identities=17% Similarity=0.208 Sum_probs=79.8
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
.+.|+..++++.| |+++.++|+-++..++.+-+. +||+++ ++.-.. .|-+.++++..+.+. +.||||
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v----~AellPedK~~~V~~l~~~g~~----VamVGD 607 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEV----RAELLPEDKAEIVRELQAEGRK----VAMVGD 607 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhh----eccCCcHHHHHHHHHHHhcCCE----EEEEeC
Confidence 6789999998877 579999999999999999999 999544 333222 567799999865445 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..||--|= ..|.+ ++.-|-++ +.....+|.++.=.+|..+.+.+
T Consensus 608 GINDAPAL----A~AdV---GiAmG~Gt--DvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 608 GINDAPAL----AAADV---GIAMGSGT--DVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred CchhHHHH----hhcCe---eEeecCCc--HHHHHhCCEEEecCCHHHHHHHH
Confidence 99998876 56654 34344343 34445667555555677776544
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0016 Score=53.69 Aligned_cols=76 Identities=11% Similarity=0.156 Sum_probs=50.0
Q ss_pred CEEEEeCCchHHHHHHHHHhcCCCCCCCe--eEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccC
Q 027798 104 RIYIVTSNQSRFVETLLRELAGVTITPDR--LYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 104 ~l~IvTn~~~~~~~~~L~~~~gl~~~fd~--i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aG 180 (218)
...++++.....+...++. .++..++.. +.-...+ .|..+++.+....+.+++++++|||+.+|+.+. +.+|
T Consensus 109 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml----~~ag 183 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLF----RVVG 183 (215)
T ss_pred EEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH----HhCC
Confidence 4456677777888888887 776543211 1111122 777766555444445556699999999999999 9999
Q ss_pred ccEE
Q 027798 181 WNLY 184 (218)
Q Consensus 181 i~~i 184 (218)
+.++
T Consensus 184 ~~va 187 (215)
T TIGR01487 184 FKVA 187 (215)
T ss_pred CeEE
Confidence 7543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0024 Score=54.77 Aligned_cols=73 Identities=18% Similarity=0.110 Sum_probs=48.7
Q ss_pred eCCchHHHHHHHHHhcCCC----CCCCeeEeCCCCChHHHHHHhhhcCCCCC-CceEEEcCchhhHHhccccccccCccE
Q 027798 109 TSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 109 Tn~~~~~~~~~L~~~~gl~----~~fd~i~~~~~~pKPe~l~~l~~~~~~~~-~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
|+.....+...++. .++. .+|..|.+.. .|..+++.+....+.++ +++++|||+.+|+.++ +.+|+.+
T Consensus 158 ~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~----~~ag~~v 230 (273)
T PRK00192 158 SEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLPML----EAADIAV 230 (273)
T ss_pred chHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHH----HhCCeeE
Confidence 55556666777776 6765 4444555544 56665555544444455 5699999999999999 9999754
Q ss_pred EEEeCC
Q 027798 184 YLVDWG 189 (218)
Q Consensus 184 i~v~~G 189 (218)
+ +..+
T Consensus 231 a-m~NA 235 (273)
T PRK00192 231 V-VPGP 235 (273)
T ss_pred E-eCCC
Confidence 4 4443
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0045 Score=59.99 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=78.1
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
++.|++.+.+++| |+++.++|+-+...+..+-+. +|+.+ +++.-.. .|-++++.++.+-+. +.|+||
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~----v~A~~~PedK~~iV~~lQ~~G~~----VaMtGD 511 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDR----FVAECKPEDKINVIREEQAKGHI----VAMTGD 511 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCce----EEcCCCHHHHHHHHHHHHhCCCE----EEEECC
Confidence 6889999999887 579999999999999999999 99965 3333221 445588888765555 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..||.-|= ++|.+ ++.-|-++. .....++-+..-.|+..+.+.+
T Consensus 512 GvNDAPAL----a~ADV---GIAMgsGTd--vAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 512 GTNDAPAL----AEANV---GLAMNSGTM--SAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred ChhhHHHH----HhCCE---EEEeCCCCH--HHHHhCCEEEcCCCHHHHHHHH
Confidence 99999888 88876 333343443 2233444333334677666543
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0056 Score=60.19 Aligned_cols=115 Identities=15% Similarity=0.110 Sum_probs=79.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC---Ce-----------------------eEeCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP---DR-----------------------LYGLGTG 139 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f---d~-----------------------i~~~~~~ 139 (218)
++.|++.++++.+ |+++.++|+.+...+..+-+. +||.... +. +++.-..
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P 520 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP 520 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence 6789999998877 679999999999999999999 9996420 00 2332221
Q ss_pred -ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 140 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 140 -pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.|-.+++.++.+.+. +.|+||+.||.-|= ++|.+- |++.. ++ +.....++-++.-.|+..+...+
T Consensus 521 e~K~~iV~~lq~~G~~----VamvGDGvNDapAL----~~AdVG-IAm~~--gt--dvAkeaADivLl~d~l~~I~~ai 586 (755)
T TIGR01647 521 EHKYEIVEILQKRGHL----VGMTGDGVNDAPAL----KKADVG-IAVAG--AT--DAARSAADIVLTEPGLSVIVDAI 586 (755)
T ss_pred HHHHHHHHHHHhcCCE----EEEEcCCcccHHHH----HhCCee-EEecC--Cc--HHHHHhCCEEEEcCChHHHHHHH
Confidence 344488888766555 99999999999988 888873 44432 33 33344566445445676665543
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.007 Score=60.38 Aligned_cols=114 Identities=15% Similarity=0.157 Sum_probs=77.8
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC----------------------eeEeCCCC-ChH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD----------------------RLYGLGTG-PKV 142 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd----------------------~i~~~~~~-pKP 142 (218)
++.|++.++++.+ |+++.++|+.+...+..+-+. +||..- + .|+++-.. .|-
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 6778999998877 679999999999999999999 999521 1 12322221 333
Q ss_pred HHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 143 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 143 e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.+.+.++...+. +.|+||+.||.-|= +.|.+- +++.. ++ +.....++-++.-.|+..+...+
T Consensus 593 ~iV~~lq~~G~v----Vam~GDGvNDapAL----k~AdVG-IAmg~--gt--dvAk~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 593 RIIGLLKKAGHT----VGFLGDGINDAPAL----RKADVG-ISVDT--AA--DIAKEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred HHHHHHHhCCCE----EEEECCCcccHHHH----HhCCEE-EEeCC--cc--HHHHHhCCEEEecCChHHHHHHH
Confidence 478887765455 99999999999998 898873 33432 23 33344556444445676665543
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0065 Score=50.06 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=49.5
Q ss_pred EEEEeCCchHHHHHHHHHhcCCCCCCC-eeEeCC---CC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccccccc
Q 027798 105 IYIVTSNQSRFVETLLRELAGVTITPD-RLYGLG---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 105 l~IvTn~~~~~~~~~L~~~~gl~~~fd-~i~~~~---~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~a 179 (218)
..+.+....+.+...++. ++....+. ...+.+ .+ +|+.+++.+......+++++++|||+.+|+.+. +.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~----~~a 184 (225)
T TIGR01482 110 VKMRYGIDVDTVREIIKE-LGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLF----EVP 184 (225)
T ss_pred EEEeecCCHHHHHHHHHh-cCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHH----Hhc
Confidence 445566666777778887 77531100 000111 12 788866666555555666799999999999999 999
Q ss_pred CccEEEEe
Q 027798 180 GWNLYLVD 187 (218)
Q Consensus 180 Gi~~i~v~ 187 (218)
|+. +++.
T Consensus 185 g~~-vam~ 191 (225)
T TIGR01482 185 GFG-VAVA 191 (225)
T ss_pred Cce-EEcC
Confidence 984 4454
|
catalyze the same reaction as SPP. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0073 Score=60.48 Aligned_cols=114 Identities=16% Similarity=0.107 Sum_probs=77.5
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC-------CC--------------eeEeCCCC-ChHH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT-------PD--------------RLYGLGTG-PKVN 143 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~-------fd--------------~i~~~~~~-pKPe 143 (218)
++-|++.++++.+ |+++.++|+-+...+..+-+. +||..- ++ .|++.-.. .|-.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~ 628 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKER 628 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHH
Confidence 6778999998877 679999999999999999999 999520 00 23332221 3334
Q ss_pred HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
+.+.++...+. +.|+||..||.-|= ++|.+ .|++. -++ +.....+|-++.-.|+..+.+.
T Consensus 629 IV~~Lq~~G~v----Vam~GDGvNDaPAL----k~ADV-GIAmg--~gt--dvAkeaADiVLldd~~~~I~~a 688 (902)
T PRK10517 629 IVTLLKREGHV----VGFMGDGINDAPAL----RAADI-GISVD--GAV--DIAREAADIILLEKSLMVLEEG 688 (902)
T ss_pred HHHHHHHCCCE----EEEECCCcchHHHH----HhCCE-EEEeC--CcC--HHHHHhCCEEEecCChHHHHHH
Confidence 88888765555 99999999999998 88886 33443 233 3334455644444466666554
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.01 Score=50.20 Aligned_cols=46 Identities=15% Similarity=0.043 Sum_probs=37.8
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
+|..+++.+....+.+++++++|||+.+|+.+. +.++..+++|..+
T Consensus 167 ~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml----~~~~~~~va~~na 212 (249)
T TIGR01485 167 GKGQALQYLLQKLAMEPSQTLVCGDSGNDIELF----EIGSVRGVIVSNA 212 (249)
T ss_pred ChHHHHHHHHHHcCCCccCEEEEECChhHHHHH----HccCCcEEEECCC
Confidence 888877777666666677799999999999999 8878888888643
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.003 Score=51.38 Aligned_cols=105 Identities=17% Similarity=0.153 Sum_probs=62.0
Q ss_pred hcCCCcccHHHHHHhcC---CCEEEEeCCchH-------HHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCC
Q 027798 86 GANRLYPGVSDALKLAS---SRIYIVTSNQSR-------FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQ 155 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~---~~l~IvTn~~~~-------~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~ 155 (218)
...+|+||+.|+|++|. ..+.++|+.+.. ....-|++.+|-..+-+.+++.+ |- .+. ..
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---K~------~v~-~D- 138 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---KT------LVG-GD- 138 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---GG------GC---S-
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---CC------eEe-cc-
Confidence 45689999999999983 257777766543 33445555144322334445433 21 111 23
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
++|+|++..+..+ .++|++++.....|+.... ....+.|..|+.+.
T Consensus 139 ----vlIDD~~~n~~~~----~~~g~~~iLfd~p~Nr~~~-------~~~Rv~~W~ei~~~ 184 (191)
T PF06941_consen 139 ----VLIDDRPHNLEQF----ANAGIPVILFDQPYNRDES-------NFPRVNNWEEIEDL 184 (191)
T ss_dssp ----EEEESSSHHHSS-----SSESSEEEEE--GGGTT---------TSEEE-STTSHHHH
T ss_pred ----EEecCChHHHHhc----cCCCceEEEEcCCCCCCCC-------CCccCCCHHHHHHH
Confidence 8999999999999 9999999999998886432 33556688777554
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.012 Score=59.36 Aligned_cols=115 Identities=18% Similarity=0.183 Sum_probs=78.8
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC-----------------------eeEeCCCC-Ch
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD-----------------------RLYGLGTG-PK 141 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd-----------------------~i~~~~~~-pK 141 (218)
++.|++.++++.+ |+++.++|+.....+..+-+. .||...-. .|++.-.. .|
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 6778999998877 679999999999999999999 99963211 23333221 33
Q ss_pred HHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC-CCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 142 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG-YNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G-~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
-.+++.++...+. +.|+||+.||.-|= ++|.+ ++.-| .++ +.....+|.++.-.++..+.+.+
T Consensus 658 ~~iV~~lq~~g~v----Vam~GDGvNDapAL----k~AdV---GIAmg~~gt--dvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 658 QLLVLMLKDMGEV----VAVTGDGTNDAPAL----KLADV---GFSMGISGT--EVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHHCCCE----EEEECCCCchHHHH----HhCCc---ceecCCCcc--HHHHHhCCEEEecCCHHHHHHHH
Confidence 3488888765555 99999999999998 88876 23334 232 33344556444444677666544
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0091 Score=59.82 Aligned_cols=115 Identities=16% Similarity=0.121 Sum_probs=78.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC-------CC--------------eeEeCCCC-ChHH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT-------PD--------------RLYGLGTG-PKVN 143 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~-------fd--------------~i~~~~~~-pKPe 143 (218)
++.|++.++++.+ |+++.++|+-+...+..+-+. +||..- ++ .|++.-.. .|-.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~ 628 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR 628 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence 6778999998877 679999999999999999999 999521 00 23332221 2333
Q ss_pred HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++.++..-+. +.|+||..||.-|= ++|.+ .|++.. ++ +.....+|-++.-.|+..+.+.+
T Consensus 629 iV~~Lq~~G~v----VamtGDGvNDaPAL----k~ADV-GIAmg~--gt--dvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 629 VLKALQANGHT----VGFLGDGINDAPAL----RDADV-GISVDS--GA--DIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred HHHHHHhCCCE----EEEECCCchhHHHH----HhCCE-EEEeCc--cc--HHHHHhcCEEEecCChHHHHHHH
Confidence 88888765555 99999999999988 88887 344432 33 33344556444444677666543
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0051 Score=52.06 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=45.2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccccccc-------CccEEEEeCCCCCHHHHHhhcCCCceEEechhh
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD-------GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 212 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~a-------Gi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~e 212 (218)
.|..+++.+......++.+++||||+.+|+.++ +.+ |..++.|.+|-. ...++ +.+.+..+
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~----~~~~~~~~~~g~~~v~v~~g~~------~~~A~--~~~~~~~~ 234 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAF----RVVNNQWGNYGFYPVPIGSGSK------KTVAK--FHLTGPQQ 234 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHH----HHHhcccCCCCeEEEEEecCCc------CCCce--EeCCCHHH
Confidence 456666666555555566699999999999999 888 677777875521 12344 45557777
Q ss_pred Hhhhc
Q 027798 213 FCTKL 217 (218)
Q Consensus 213 l~~~~ 217 (218)
+...|
T Consensus 235 v~~~L 239 (244)
T TIGR00685 235 VLEFL 239 (244)
T ss_pred HHHHH
Confidence 76654
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.027 Score=47.09 Aligned_cols=43 Identities=12% Similarity=-0.139 Sum_probs=33.6
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
+|+.+++.+......+++++++|||+.+|+.+. +.+|. ++++.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml----~~~~~-~iav~ 201 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEML----RGLTL-GVVVG 201 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHH----cCCCc-EEEEc
Confidence 888877777666666667799999999999999 88875 33443
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.021 Score=58.16 Aligned_cols=116 Identities=11% Similarity=0.157 Sum_probs=77.0
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC----------Ce-----------------------
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP----------DR----------------------- 132 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f----------d~----------------------- 132 (218)
++.|++.++++.+ |+++.++|+.....+..+-+. .||.... ..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 6788999999877 679999999999999999999 9995321 11
Q ss_pred eEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechh
Q 027798 133 LYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 211 (218)
Q Consensus 133 i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~ 211 (218)
|+++-.. .|-++++.++...+. +.|+||+.||.-|= +.|++- +.-|.+.. +.....++.++.-.|+.
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~----Vam~GDGvNDapaL----k~AdVG---IAmg~~gt-~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAF----CAMTGDGVNDSPSL----KMANVG---IAMGINGS-DVAKDASDIVLSDDNFA 792 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCe----eEEeCCCcchHHHH----HhCCcc---EecCCCcc-HHHHHhcCEEEecCCHH
Confidence 2222211 233477877765555 99999999999998 888863 33332212 23334555444434576
Q ss_pred hHhhhc
Q 027798 212 DFCTKL 217 (218)
Q Consensus 212 el~~~~ 217 (218)
.+...+
T Consensus 793 ~I~~~i 798 (1053)
T TIGR01523 793 SILNAI 798 (1053)
T ss_pred HHHHHH
Confidence 665543
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.068 Score=45.19 Aligned_cols=81 Identities=20% Similarity=0.159 Sum_probs=59.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHH---HHHHHHHhcCCCCCCCeeEeCC--CCC------hHHHHHHhh-h
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLG--TGP------KVNVLKQLQ-K 150 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~---~~~~L~~~~gl~~~fd~i~~~~--~~p------KPe~l~~l~-~ 150 (218)
...++.|++.++++.+ |.++.++|+.+... +..-|.+ .|+..+ +.++-.. +.. |-+..+++. .
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~ 194 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEE 194 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhC
Confidence 3467999999999876 57999999999766 6777777 887765 6665443 222 444444544 3
Q ss_pred cCCCCCCceEEEcCchhhHHhc
Q 027798 151 KPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA 172 (218)
.... +..|||...|+.++
T Consensus 195 GYrI----v~~iGDq~sDl~G~ 212 (229)
T TIGR01675 195 GYRI----WGNIGDQWSDLLGS 212 (229)
T ss_pred CceE----EEEECCChHHhcCC
Confidence 4666 88999999999877
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.041 Score=55.79 Aligned_cols=115 Identities=11% Similarity=0.135 Sum_probs=74.7
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC------------------------Ce---------
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP------------------------DR--------- 132 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f------------------------d~--------- 132 (218)
++.|++.++++.+ |+++.++|+.+...+..+.+. +|+...- ..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 6778999998876 679999999999999999999 9984210 01
Q ss_pred ----------------eEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHH
Q 027798 133 ----------------LYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKE 195 (218)
Q Consensus 133 ----------------i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~ 195 (218)
|+++-.. .|-.+.+.++...+. +.|+||+.+|.-|= +.|.+- +.-|.... +
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~v----v~~~GDG~ND~paL----k~AdVG---iamg~~G~-~ 714 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAI----VAVTGDGVNDSPAL----KKADIG---VAMGIAGS-D 714 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCE----EEEECCCcccHHHH----hhCCcc---eecCCccc-H
Confidence 2222211 222267777655455 99999999999998 888863 33342212 2
Q ss_pred HHhhcCCCceEEechhhHhhh
Q 027798 196 RAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 196 l~~~~~~~~i~~~~l~el~~~ 216 (218)
.....++.++.-.|+..+.+.
T Consensus 715 vak~aADivL~dd~f~~Iv~a 735 (997)
T TIGR01106 715 VSKQAADMILLDDNFASIVTG 735 (997)
T ss_pred HHHHhhceEEecCCHHHHHHH
Confidence 223345544443356666554
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.013 Score=47.68 Aligned_cols=41 Identities=17% Similarity=0.089 Sum_probs=32.6
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEE
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
+|+.+++.+......+++++++|||+.+|+.++ +.+|+.++
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~----~~~~~~va 203 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMF----EVAGLAVA 203 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH----HHcCCceE
Confidence 788877666555555666799999999999999 99988653
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.076 Score=52.52 Aligned_cols=109 Identities=16% Similarity=0.173 Sum_probs=73.6
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
++.|++..++..| |++++++|+.+...++.+-+. .| ++.|++--.. .|-+.++++..+..- +.||||
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~~~~----VaMVGD 793 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKNGGP----VAMVGD 793 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhcCCc----EEEEeC
Confidence 5667777665554 789999999999999999998 88 6777776443 677799999876655 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
..||--|= ..|.+ ++.-|-++ +..-..+|.+..-.||.++..
T Consensus 794 GINDaPAL----A~AdV---GIaig~gs--~vAieaADIVLmrn~L~~v~~ 835 (951)
T KOG0207|consen 794 GINDAPAL----AQADV---GIAIGAGS--DVAIEAADIVLMRNDLRDVPF 835 (951)
T ss_pred CCCccHHH----Hhhcc---ceeecccc--HHHHhhCCEEEEccchhhhHH
Confidence 99986654 33333 22223333 233334553333335655543
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.39 Score=41.00 Aligned_cols=145 Identities=17% Similarity=0.153 Sum_probs=76.1
Q ss_pred HHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHH
Q 027798 44 LENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLL 120 (218)
Q Consensus 44 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L 120 (218)
+..|......++.+.+++.+++.+.... ....+.+|+.++++.| ++++.|.|.+-.+.++.+|
T Consensus 59 M~EWw~kah~llv~~~l~k~~i~~~V~~--------------s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL 124 (246)
T PF05822_consen 59 MEEWWTKAHELLVEQGLTKSEIEEAVKE--------------SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVL 124 (246)
T ss_dssp HHHHHHHHHHHHHHHT-BGGGHHHHHHC--------------S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcCHHHHHHHHHh--------------cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHH
Confidence 3444444555555555555444433332 2356889999998887 4699999999999999999
Q ss_pred HHhcCCCCCCCeeEeC-----CCC-------------ChHH-HHHHhh-hcCCCCCCceEEEcCchhhHHhcccccccc-
Q 027798 121 RELAGVTITPDRLYGL-----GTG-------------PKVN-VLKQLQ-KKPEHQGLRLHFVEDRLATLKNVIKEPELD- 179 (218)
Q Consensus 121 ~~~~gl~~~fd~i~~~-----~~~-------------pKPe-~l~~l~-~~~~~~~~e~l~IGDs~~Di~aA~~~~~~a- 179 (218)
++ .|....==.|++. +.+ .|-+ ++.... .+.-..+..++..||+..|+.+| ...
T Consensus 125 ~q-~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma----~G~~ 199 (246)
T PF05822_consen 125 RQ-AGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMA----DGVP 199 (246)
T ss_dssp HH-TT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTT----TT-S
T ss_pred HH-cCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccccCchHHHHhccCCcEEEecCccCChHhh----cCCC
Confidence 99 7643110112321 111 3444 442100 01112344599999999999999 544
Q ss_pred Ccc---EEEEeCCCCCHHH-HHhhcCCCceEEec
Q 027798 180 GWN---LYLVDWGYNTPKE-RAEAASMPRIQLLQ 209 (218)
Q Consensus 180 Gi~---~i~v~~G~~~~~~-l~~~~~~~~i~~~~ 209 (218)
... .||... ...++ +......+.|.+.+
T Consensus 200 ~~~~~lkIGFLn--~~ve~~l~~Y~~~yDIVlv~ 231 (246)
T PF05822_consen 200 DEENVLKIGFLN--DKVEENLEKYLEAYDIVLVD 231 (246)
T ss_dssp --SEEEEEEEE---SSHHHHHHHHHCCSSEEEET
T ss_pred ccccEEEEEecc--cCHHHHHHHHHhcCCEEEEC
Confidence 222 233332 23343 66666667776654
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.074 Score=49.66 Aligned_cols=78 Identities=15% Similarity=0.237 Sum_probs=60.5
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+.|++.++++.| +.++.++|+.+...+..+-+. +|+ ++.-.. .|-+.++++...... +.|||
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~~~g~~----v~~vG 413 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQKKGRV----VAMTG 413 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHHHCCCE----EEEEC
Confidence 36889999998877 568999999999999999998 886 232221 455577777654444 99999
Q ss_pred CchhhHHhccccccccCc
Q 027798 164 DRLATLKNVIKEPELDGW 181 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi 181 (218)
|..+|.-+- +.|++
T Consensus 414 Dg~nD~~al----~~Adv 427 (499)
T TIGR01494 414 DGVNDAPAL----KKADV 427 (499)
T ss_pred CChhhHHHH----HhCCC
Confidence 999999888 77775
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.025 Score=41.46 Aligned_cols=72 Identities=21% Similarity=0.354 Sum_probs=43.0
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchH---HHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceE
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~---~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l 160 (218)
...++||+.++|+.| ++++.++||++.. .....|+. +|+.--.+.|+++.. .+...+... ....+++
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~-~Gi~~~~~~i~ts~~----~~~~~l~~~--~~~~~v~ 84 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK-LGIPVDEDEIITSGM----AAAEYLKEH--KGGKKVY 84 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH-TTTT--GGGEEEHHH----HHHHHHHHH--TTSSEEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh-cCcCCCcCEEEChHH----HHHHHHHhc--CCCCEEE
Confidence 346899999999988 5799999999854 34455577 888765566665532 122222221 1234488
Q ss_pred EEcCc
Q 027798 161 FVEDR 165 (218)
Q Consensus 161 ~IGDs 165 (218)
+||-.
T Consensus 85 vlG~~ 89 (101)
T PF13344_consen 85 VLGSD 89 (101)
T ss_dssp EES-H
T ss_pred EEcCH
Confidence 88865
|
... |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.12 Score=44.11 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=57.5
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHH----HHHHHHHhcCCCCCCC-eeEeCCCC-ChHHHHHHhhhcCCCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRF----VETLLRELAGVTITPD-RLYGLGTG-PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~----~~~~L~~~~gl~~~fd-~i~~~~~~-pKPe~l~~l~~~~~~~~~ 157 (218)
...+.||+.|+|+.. |..++-+||...+. +..-|.. .|+..--+ .++--.+. +|..-.+........
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~i--- 195 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDYKI--- 195 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhccce---
Confidence 357899999999987 56999999998875 4556666 78764332 23333333 666555555556677
Q ss_pred ceEEEcCchhhHHhc
Q 027798 158 RLHFVEDRLATLKNV 172 (218)
Q Consensus 158 e~l~IGDs~~Di~aA 172 (218)
+++|||+..|....
T Consensus 196 -Vm~vGDNl~DF~d~ 209 (274)
T COG2503 196 -VMLVGDNLDDFGDN 209 (274)
T ss_pred -eeEecCchhhhcch
Confidence 99999999988766
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.062 Score=46.33 Aligned_cols=72 Identities=15% Similarity=0.247 Sum_probs=46.0
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCc---hHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~---~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~ 161 (218)
..++||+.++|++| +.+++++||++ +......|+. +|+....+.|+++.. ++..+..+....+.++++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~ts~~-----~~~~~l~~~~~~~~~v~~ 90 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFSSAL-----CAARLLRQPPDAPKAVYV 90 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEecHHH-----HHHHHHHhhCcCCCEEEE
Confidence 46899999999987 56999999966 3344456777 888655565655432 222222221112345999
Q ss_pred EcCc
Q 027798 162 VEDR 165 (218)
Q Consensus 162 IGDs 165 (218)
||+.
T Consensus 91 iG~~ 94 (279)
T TIGR01452 91 IGEE 94 (279)
T ss_pred EcCH
Confidence 9986
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.15 Score=43.11 Aligned_cols=94 Identities=19% Similarity=0.204 Sum_probs=69.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcC-------CCCCCCeeEeCCCC--ChHHHHHHhhhcCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTG--PKVNVLKQLQKKPEH 154 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~g-------l~~~fd~i~~~~~~--pKPe~l~~l~~~~~~ 154 (218)
....|++|...++.. +.+++|.|+.+....+.+..+ .+ +..|||.-+|.-.. .--.+...++.++.+
T Consensus 121 k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~-s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~e 199 (254)
T KOG2630|consen 121 KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGY-SDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPRE 199 (254)
T ss_pred cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcc-cCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhh
Confidence 347999999999965 569999999998777665543 32 24566665554321 222377778877766
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
.+|.-|-..-..+| +.+|+.+..+...
T Consensus 200 ----iLfLTd~~~Ea~aa----~~aGl~a~l~~rP 226 (254)
T KOG2630|consen 200 ----ILFLTDVPREAAAA----RKAGLQAGLVSRP 226 (254)
T ss_pred ----eEEeccChHHHHHH----HhcccceeeeecC
Confidence 99999999999999 9999988777543
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.021 Score=44.81 Aligned_cols=80 Identities=19% Similarity=0.129 Sum_probs=54.8
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCC-CCCCCeeEeCCCC---ChH--HHHHHhhhcCCCCCCce
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG---PKV--NVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl-~~~fd~i~~~~~~---pKP--e~l~~l~~~~~~~~~e~ 159 (218)
..+.||+.++|+.+. ..++|.|++++.+++.+++. +.- ..+|+.+++.+.. .+. .-+..++. +.+.+
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~----~~~~v 109 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSYIKDLSKLGR----DLDNV 109 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEEE--GGGSSS-----GGGE
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhccccccccccccccccccccccchHHHhh----ccccE
Confidence 357899999999884 69999999999999999999 776 5789999887643 111 12333332 34559
Q ss_pred EEEcCchhhHHhc
Q 027798 160 HFVEDRLATLKNV 172 (218)
Q Consensus 160 l~IGDs~~Di~aA 172 (218)
|+|+|++.-...-
T Consensus 110 vivDD~~~~~~~~ 122 (159)
T PF03031_consen 110 VIVDDSPRKWALQ 122 (159)
T ss_dssp EEEES-GGGGTTS
T ss_pred EEEeCCHHHeecc
Confidence 9999999855443
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.13 Score=41.96 Aligned_cols=99 Identities=14% Similarity=0.068 Sum_probs=61.7
Q ss_pred hhhcCCCcccHHHHHHh---cCCCEEEEeCCchHH---HHHHHHHhcCCCCCCCeeEeCCCCChHH--HHHHhhhcCCCC
Q 027798 84 WIGANRLYPGVSDALKL---ASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLGTGPKVN--VLKQLQKKPEHQ 155 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~---L~~~l~IvTn~~~~~---~~~~L~~~~gl~~~fd~i~~~~~~pKPe--~l~~l~~~~~~~ 155 (218)
|....-|-+-+.+++.. -|..++.+|+.++.. +...|.+-|.|...--.++..+. |||. --.....+...
T Consensus 109 ~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk-~k~~qy~Kt~~i~~~~~- 186 (237)
T COG3700 109 WDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK-PKPGQYTKTQWIQDKNI- 186 (237)
T ss_pred CccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC-CCcccccccHHHHhcCc-
Confidence 44444455555666552 245899999887753 33444332677666565665554 5665 11111222334
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
-++-|||-+||.|| +.+|++.|-+....+
T Consensus 187 ---~IhYGDSD~Di~AA----keaG~RgIRilRAaN 215 (237)
T COG3700 187 ---RIHYGDSDNDITAA----KEAGARGIRILRAAN 215 (237)
T ss_pred ---eEEecCCchhhhHH----HhcCccceeEEecCC
Confidence 69999999999999 999999987765433
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.13 Score=43.36 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=31.8
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
.|-.+++.+....+.+++++++|||+.+|+.+. +.+|+.+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~----~~~~~~~ 227 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEML----EAAGYGV 227 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHH----HhCCcee
Confidence 677666666555555666799999999999999 9999853
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.11 Score=45.07 Aligned_cols=52 Identities=35% Similarity=0.532 Sum_probs=37.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHH---HHHHHhcCCCCCCCeeEeCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLG 137 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~---~~L~~~~gl~~~fd~i~~~~ 137 (218)
+-..++||+.++|+.| +.++.++||+++..-+ ..|+...+++...+.|+++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 3457999999999977 5799999999876444 33333145556677777664
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.078 Score=44.40 Aligned_cols=41 Identities=12% Similarity=0.029 Sum_probs=31.3
Q ss_pred ChHHHHHHhhhcCCC--CCCceEEEcCchhhHHhccccccccCccEE
Q 027798 140 PKVNVLKQLQKKPEH--QGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 140 pKPe~l~~l~~~~~~--~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
.|+.+++.+....+. +++++++|||+.+|+.+- +.+|+.++
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml----~~ag~~v~ 223 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMF----EVVDLAFL 223 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHH----HhCCCcEe
Confidence 788866666443332 455699999999999999 99998654
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.9 Score=38.61 Aligned_cols=38 Identities=13% Similarity=0.374 Sum_probs=33.5
Q ss_pred CCCcccHHHHHHhcCC--CEEEEeCCchHHHHHHHHHhcCC
Q 027798 88 NRLYPGVSDALKLASS--RIYIVTSNQSRFVETLLRELAGV 126 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~~--~l~IvTn~~~~~~~~~L~~~~gl 126 (218)
.++-||+.++++.|+. .-+|+|++-++++.++... .|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~-ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASM-IGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHh-cCC
Confidence 5789999999999986 6689999999999999888 887
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.062 Score=45.32 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=56.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchH---HHHHHHHHhcCCCCCCCeeE-eC-CCC-------ChHHHHHHhhhc-
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSR---FVETLLRELAGVTITPDRLY-GL-GTG-------PKVNVLKQLQKK- 151 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~---~~~~~L~~~~gl~~~fd~i~-~~-~~~-------pKPe~l~~l~~~- 151 (218)
..+.||+.++++.+ |..++++||.+.. .+..-|.+ .|.... +.++ -. ... -|.+..+.+..+
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~-~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~G 191 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGW-DHLILRPDKDPSKKSAVEYKSERRKEIEKKG 191 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTB-SCGEEEEESSTSS------SHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCcc-chhccccccccccccccccchHHHHHHHHcC
Confidence 37899999999876 6799999988764 55666777 896543 4443 22 221 255556666555
Q ss_pred CCCCCCceEEEcCchhhHHhc
Q 027798 152 PEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA 172 (218)
... +.+|||...|+.++
T Consensus 192 y~I----i~~iGD~~~D~~~~ 208 (229)
T PF03767_consen 192 YRI----IANIGDQLSDFSGA 208 (229)
T ss_dssp EEE----EEEEESSGGGCHCT
T ss_pred CcE----EEEeCCCHHHhhcc
Confidence 677 99999999999995
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.18 Score=42.60 Aligned_cols=45 Identities=13% Similarity=0.076 Sum_probs=30.8
Q ss_pred ChHHHHHHhhhcCCCC--CCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 140 PKVNVLKQLQKKPEHQ--GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~--~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
.|..+++.+....+.+ ++++++|||+.+|+.+. +.+|..+ ++..+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml----~~ag~~v-am~Na 222 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLL----EVVDLAV-VVPGP 222 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHH----HHCCEEE-EeCCC
Confidence 6766444443333333 56699999999999999 9999754 44433
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.59 Score=47.15 Aligned_cols=87 Identities=10% Similarity=0.209 Sum_probs=66.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC--eeEe-CCCC-------------------ChH
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYG-LGTG-------------------PKV 142 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd--~i~~-~~~~-------------------pKP 142 (218)
.+|-+++.++++.+ |+++-++|+-....+..+-+. .|+..--+ .++. .+-. -.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 47889999999877 679999999999999999999 99865442 2433 2211 224
Q ss_pred H----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE
Q 027798 143 N----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 143 e----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
+ +.+.++..-+. +.|+||..||.-|= |+|.+=+
T Consensus 625 ~qK~~IV~~lq~~g~v----VamtGDGvNDapAL----k~ADVGI 661 (917)
T COG0474 625 EQKARIVEALQKSGHV----VAMTGDGVNDAPAL----KAADVGI 661 (917)
T ss_pred HHHHHHHHHHHhCCCE----EEEeCCCchhHHHH----HhcCccE
Confidence 3 77777766555 99999999999998 8988743
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.47 Score=48.52 Aligned_cols=38 Identities=16% Similarity=0.333 Sum_probs=31.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
++-|||.++++.| |+++-++|+-..+.+..+-.. .|+-
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 6889999999887 679999999998888888777 7763
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.19 Score=45.01 Aligned_cols=91 Identities=20% Similarity=0.301 Sum_probs=58.0
Q ss_pred ccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcC--CCCCCCeeEeCCCC-------ChHH----------------
Q 027798 92 PGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG-------PKVN---------------- 143 (218)
Q Consensus 92 ~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~g--l~~~fd~i~~~~~~-------pKPe---------------- 143 (218)
|....+|+.| |.++.++||++..+++.-++.+.| +.++||.|+..... .+|=
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~ 322 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVD 322 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhh
Confidence 3444455555 679999999999999888776333 56899998753211 2221
Q ss_pred -----------HHHHhhhcCCCCCCceEEEcCchh-hHHhcccccc-ccCccEEEE
Q 027798 144 -----------VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPE-LDGWNLYLV 186 (218)
Q Consensus 144 -----------~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~~~~~-~aGi~~i~v 186 (218)
.+..+..-.+=.+.+++|+||.+. |+..- . ++|+.+-++
T Consensus 323 klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~----tlkhgWRTgAI 374 (510)
T KOG2470|consen 323 KLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADL----TLKHGWRTGAI 374 (510)
T ss_pred hcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhh----Hhhcccccccc
Confidence 222222212234566999999985 77665 4 778776554
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.13 Score=43.62 Aligned_cols=43 Identities=14% Similarity=0.067 Sum_probs=33.8
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|..+++.+....+.++++++.|||+.+|+.+- +.+|. ++++.
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml----~~ag~-~vAm~ 238 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMI----EYAGV-GVAMG 238 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHH----HhCCc-eEEec
Confidence 677777776655566667799999999999999 99998 44444
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.48 Score=48.51 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=34.5
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
.++.|++.++++.| |+++.++|+.+...+..+-+. .||.
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 36889999999877 579999999999999999999 9984
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.57 Score=37.82 Aligned_cols=91 Identities=20% Similarity=0.171 Sum_probs=65.1
Q ss_pred CcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCC-CCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCch
Q 027798 90 LYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 166 (218)
Q Consensus 90 l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl-~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~ 166 (218)
+-.+|...|..++ .+++-+|..-....+..=.- +.+ ...+|.+.-.+...|.++++.+++ -+|++|+.
T Consensus 73 ~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~-l~~q~ih~~~l~i~g~h~KV~~vrth~i--------dlf~ed~~ 143 (194)
T COG5663 73 LAQLVKQVLPSLKEEHRLIYITARKADLTRITYAW-LFIQNIHYDHLEIVGLHHKVEAVRTHNI--------DLFFEDSH 143 (194)
T ss_pred HHHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHH-HHHhccchhhhhhhcccccchhhHhhcc--------CccccccC
Confidence 4467888888875 48888888877766544333 322 345666543332267788888876 48999996
Q ss_pred -hhHHhccccccccCccEEEEeCCCCCH
Q 027798 167 -ATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 167 -~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
+-++.| +++|++++.+...|+..
T Consensus 144 ~na~~iA----k~~~~~vilins~ynRk 167 (194)
T COG5663 144 DNAGQIA----KNAGIPVILINSPYNRK 167 (194)
T ss_pred chHHHHH----HhcCCcEEEecCccccc
Confidence 678888 99999999999988864
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.35 E-value=0.1 Score=44.19 Aligned_cols=43 Identities=14% Similarity=0.095 Sum_probs=33.9
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|..+++.+....+.++++++.|||+.||+.+- +.+|.. +++.
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml----~~ag~~-vAm~ 232 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEML----SMAGKG-CIMG 232 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHH----HHcCCC-eeec
Confidence 677777776655566667799999999999999 999984 4454
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=92.05 E-value=0.65 Score=39.71 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=56.8
Q ss_pred EEEEeCCchH-HHHHHHHHhcCCCCCCC--eeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCc
Q 027798 105 IYIVTSNQSR-FVETLLRELAGVTITPD--RLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 105 l~IvTn~~~~-~~~~~L~~~~gl~~~fd--~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi 181 (218)
-++||+.+-- .+-++|= +||..+|. -||++....|..+.+.+..+.+.+...-++|||+..-=+|| +..++
T Consensus 178 NvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aA----k~l~w 251 (274)
T TIGR01658 178 NVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAA----QAMNW 251 (274)
T ss_pred EEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHH----HhcCC
Confidence 4567766644 3333433 78888884 47877655888877776655554445689999999999999 99999
Q ss_pred cEEEEeCC
Q 027798 182 NLYLVDWG 189 (218)
Q Consensus 182 ~~i~v~~G 189 (218)
+++-+...
T Consensus 252 PFw~I~~h 259 (274)
T TIGR01658 252 PFVKIDLH 259 (274)
T ss_pred CeEEeecC
Confidence 99888643
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=91.45 E-value=1.7 Score=34.35 Aligned_cols=90 Identities=12% Similarity=0.101 Sum_probs=55.3
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHH---HHHHHhc---CCCCCCCeeEeCCC----------C-C-----hHH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVE---TLLRELA---GVTITPDRLYGLGT----------G-P-----KVN 143 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~---~~L~~~~---gl~~~fd~i~~~~~----------~-p-----KPe 143 (218)
...|++.++++++ |+++.++|+.+..... ..|+. + |..-....++++.. . . |.+
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~-~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ-IKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH-hhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 4679999999877 5799999999987764 55554 2 22112234554322 1 2 334
Q ss_pred HHHHhhhcCC-CCCCceEEEcCchhhHHhccccccccCccE
Q 027798 144 VLKQLQKKPE-HQGLRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 144 ~l~~l~~~~~-~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
.++.+..-.. ..-.=+.-+||+.+|+++= +++|++.
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y----~~~gi~~ 142 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISY----SAVGIPP 142 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHH----HHcCCCh
Confidence 5665543211 1111134588999999999 9999954
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=91.26 E-value=1.4 Score=37.73 Aligned_cols=100 Identities=18% Similarity=0.233 Sum_probs=61.1
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHH---HHHHhcCCC--CC-C--CeeE-----eC--C------CC------
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVET---LLRELAGVT--IT-P--DRLY-----GL--G------TG------ 139 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~---~L~~~~gl~--~~-f--d~i~-----~~--~------~~------ 139 (218)
.=+++.++++.| ++++..+|..+...... .|+. +||+ .. | +..+ .. . .|
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 335666666665 57899999888765544 4455 6663 11 0 0000 00 0 01
Q ss_pred -ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 140 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 140 -pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
+|-++|..+...-...|+.+|||+|+...+.+..+..++.||.+++..|..
T Consensus 161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence 566666665555555666699999998766543333378999999998754
|
The function is not known. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.71 E-value=1.1 Score=44.40 Aligned_cols=85 Identities=19% Similarity=0.294 Sum_probs=65.8
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC----eeEeC-CCC--C-----------------
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD----RLYGL-GTG--P----------------- 140 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd----~i~~~-~~~--p----------------- 140 (218)
-+|.++|.+.++.+ |+++.++|+.+.+.++.+-+. .|+...-+ ..++. +.. +
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 37889999998876 689999999999999999999 99866555 22322 211 1
Q ss_pred ----hHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCc
Q 027798 141 ----KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 141 ----KPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi 181 (218)
|-.+.+.|+...+. +-|-||..||--|= |.|.+
T Consensus 662 ~P~HK~kIVeaLq~~gei----vAMTGDGVNDApAL----K~AdI 698 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEV----VAMTGDGVNDAPAL----KKADI 698 (972)
T ss_pred CchhHHHHHHHHHhcCCE----EEecCCCccchhhh----hhccc
Confidence 22277888877777 99999999999888 88876
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=90.34 E-value=0.55 Score=39.81 Aligned_cols=49 Identities=12% Similarity=0.154 Sum_probs=39.6
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeC---CchHHHHHHHHHhcCCCCCCCeeEeCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGLG 137 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn---~~~~~~~~~L~~~~gl~~~fd~i~~~~ 137 (218)
..++|++.++|++| |.+++++|| .+...+...|+. +|+....+.|+++.
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~-~g~~~~~~~iit~~ 70 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS-FDIPATLETVFTAS 70 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEeeHH
Confidence 45789999999877 579999998 446777888888 99988778887753
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=90.12 E-value=0.27 Score=40.23 Aligned_cols=43 Identities=16% Similarity=0.143 Sum_probs=30.9
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.+....+.+++++++|||+.+|+.+- +.+|.. +++.
T Consensus 186 sK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml----~~~~~~-~am~ 228 (254)
T PF08282_consen 186 SKGSAIKYLLEYLGISPEDIIAFGDSENDIEML----ELAGYS-VAMG 228 (254)
T ss_dssp SHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHH----HHSSEE-EEET
T ss_pred CHHHHHHHHhhhcccccceeEEeecccccHhHH----hhcCeE-EEEc
Confidence 666655555444444555599999999999999 999874 4444
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=89.54 E-value=0.3 Score=41.60 Aligned_cols=43 Identities=12% Similarity=0.005 Sum_probs=33.4
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.+....+.++++++.|||+.||+.+= +.+|. ++++.
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml----~~ag~-~vAm~ 230 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREML----GSVGR-GFIMG 230 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHH----HHcCC-ceecc
Confidence 677777776655566666799999999999999 99997 45554
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=89.06 E-value=0.41 Score=40.82 Aligned_cols=46 Identities=24% Similarity=0.369 Sum_probs=35.7
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHH---HHHHHHHhcCCCCCCCeeEeC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGL 136 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~---~~~~L~~~~gl~~~fd~i~~~ 136 (218)
++||+.++|+.| |++++++||++... ....|+. +|+.--.+.|+++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEcH
Confidence 899999999987 57999999977664 6667777 8886555666654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=89.00 E-value=0.41 Score=40.93 Aligned_cols=43 Identities=9% Similarity=-0.042 Sum_probs=30.6
Q ss_pred ChHHHHHHhhhcCCC---CCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEH---QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~---~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.+...... ++++++.|||+.||+.+= +.+|. ++++.
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml----~~ag~-gvAM~ 232 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLL----DVMDY-AVVVK 232 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHH----HhCCE-EEEec
Confidence 676655555443344 455599999999999999 99997 44454
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=88.72 E-value=0.66 Score=42.55 Aligned_cols=45 Identities=16% Similarity=-0.030 Sum_probs=35.4
Q ss_pred ChHHHHHHhhhcC---CCCCCceEEEcCchhhHHhccccccccCccEEEEeC
Q 027798 140 PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 188 (218)
Q Consensus 140 pKPe~l~~l~~~~---~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~ 188 (218)
.|-.+++.+.... +.++++++.+||+.||+++= +.+|+.+|++..
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl----~~ag~~gvam~N 222 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELF----SVPDVYGVMVSN 222 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHH----hcCCCCEEEEcC
Confidence 6777777765554 55667799999999999999 889977777754
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.46 E-value=0.38 Score=38.28 Aligned_cols=34 Identities=21% Similarity=0.124 Sum_probs=29.3
Q ss_pred CCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCC
Q 027798 155 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNT 192 (218)
Q Consensus 155 ~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~ 192 (218)
.++|.+||||++ +||..| ...|--.+|...|-+.
T Consensus 138 ~~se~~~vGDRlfTDI~~a----N~mGs~gVw~~~gv~~ 172 (190)
T KOG2961|consen 138 TSSELIMVGDRLFTDIVYA----NRMGSLGVWTEPGVRA 172 (190)
T ss_pred ChhHeEEEccchhhhHhhh----hhccceeEEecccccc
Confidence 566799999997 699999 9999999999887653
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=88.36 E-value=2.9 Score=36.33 Aligned_cols=80 Identities=15% Similarity=0.156 Sum_probs=53.8
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchH---HHHHHHHHhcCCCCCCCeeEeCCC--C-C------hHHHHHHhh-h
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYGLGT--G-P------KVNVLKQLQ-K 150 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~---~~~~~L~~~~gl~~~fd~i~~~~~--~-p------KPe~l~~l~-~ 150 (218)
..++.||+.++.+.+ |.++.++||.+.. .+..-|.+ .|...+ +.++=.+. . . |-+.-+++. .
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 457899999998876 5799999999864 44555666 787644 55543321 1 2 222333332 3
Q ss_pred cCCCCCCceEEEcCchhhHHhc
Q 027798 151 KPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA 172 (218)
.... +..|||..+|+.+.
T Consensus 221 GYrI----v~~iGDq~sDl~G~ 238 (275)
T TIGR01680 221 GYNI----VGIIGDQWNDLKGE 238 (275)
T ss_pred CceE----EEEECCCHHhccCC
Confidence 4666 88999999999877
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=86.54 E-value=1.8 Score=37.28 Aligned_cols=76 Identities=26% Similarity=0.304 Sum_probs=53.7
Q ss_pred CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCcc
Q 027798 103 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 103 ~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
++++|||..+...-++.++.+-.+.-.+|..+...-.+|-.+|+.++- . +|++|....++.| . .+++
T Consensus 187 iRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLgG~~K~~vL~~~~p---h-----IFFDDQ~~H~~~a----~-~~vp 253 (264)
T PF06189_consen 187 IRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLGGLPKGPVLKAFRP---H-----IFFDDQDGHLESA----S-KVVP 253 (264)
T ss_pred eEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhCCCchhHHHHhhCC---C-----EeecCchhhhhHh----h-cCCC
Confidence 389999977765445544442223335565444332289999999863 2 8999999999999 4 8999
Q ss_pred EEEEeCCCC
Q 027798 183 LYLVDWGYN 191 (218)
Q Consensus 183 ~i~v~~G~~ 191 (218)
+..|-||-.
T Consensus 254 s~hVP~gv~ 262 (264)
T PF06189_consen 254 SGHVPYGVA 262 (264)
T ss_pred EEeccCCcC
Confidence 999998854
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=86.33 E-value=0.59 Score=44.79 Aligned_cols=43 Identities=14% Similarity=0.040 Sum_probs=34.2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|..+++.+....+.++++++.|||+.||+.+- +.+|. +|++.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeML----e~AG~-gVAMg 549 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEML----QLASL-GVALS 549 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHH----HHCCC-EEEeC
Confidence 777777777666666677799999999999999 99997 44454
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.74 E-value=3.4 Score=36.27 Aligned_cols=89 Identities=17% Similarity=0.241 Sum_probs=52.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHh--cCCCCCCCeeEeCCCCChHH--HHHHhhhcCCCCCCce
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLREL--AGVTITPDRLYGLGTGPKVN--VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~--~gl~~~fd~i~~~~~~pKPe--~l~~l~~~~~~~~~e~ 159 (218)
...+.||+.|+|+.| +.++.++||++....+..++++ +|+.. +..+....|. ++..|.... ...+.+
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-----v~e~~i~ssa~~~a~ylk~~~-~~~k~V 109 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-----VKEENIFSSAYAIADYLKKRK-PFGKKV 109 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-----cCcccccChHHHHHHHHHHhC-cCCCeE
Confidence 457999999998876 6799999999988777776652 45432 2333333333 444443322 233457
Q ss_pred EEEcCchhhHHhccccccccCccEEEE
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
+++|-.-.-=+. +++|+.+.+.
T Consensus 110 yvig~~gi~~eL-----~~aG~~~~g~ 131 (306)
T KOG2882|consen 110 YVIGEEGIREEL-----DEAGFEYFGG 131 (306)
T ss_pred EEecchhhhHHH-----HHcCceeecC
Confidence 777755321111 4456655443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=85.47 E-value=1.4 Score=37.38 Aligned_cols=44 Identities=16% Similarity=0.009 Sum_probs=30.5
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 188 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~ 188 (218)
.|-.+++.+..+.+.++++++++|||.+|+.+= ..+...|.|..
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-----~~~~~~vvV~N 208 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-----EGGDHGVVVGN 208 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-----CCSSEEEE-TT
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-----cCcCCEEEEcC
Confidence 566666666655555566699999999999986 56667777753
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.49 E-value=2 Score=36.85 Aligned_cols=44 Identities=18% Similarity=0.139 Sum_probs=29.9
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccccccc---CccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD---GWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~a---Gi~~i~v~ 187 (218)
.|-.+++++........+++++|||..+|+.+= +.+ +-.+|.|.
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf----~~~~~~~g~~vavg 220 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGF----AVVNRLGGISVKVG 220 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHH----HHHHhcCCeEEEEC
Confidence 455566666555444556699999999999887 665 33455554
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.38 E-value=0.73 Score=38.95 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=29.3
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCcc
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
.|-.+++.+......++++++.|||+.+|+.+= +.+|..
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml----~~ag~g 227 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEML----EVAGLG 227 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHH----HhcCee
Confidence 555566665554555556699999999999999 888864
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.19 E-value=2 Score=36.58 Aligned_cols=47 Identities=19% Similarity=0.272 Sum_probs=34.7
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHH---HHHHHhcCCCCCCCeeEeC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGL 136 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~---~~L~~~~gl~~~fd~i~~~ 136 (218)
.++||+.++|+.| |.++.++||++..... ..|+. +|+.--.+.|+++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~-~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT-AGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCHhhEecH
Confidence 6899999999877 5799999999886444 44555 6775555666654
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.70 E-value=16 Score=31.59 Aligned_cols=139 Identities=13% Similarity=0.201 Sum_probs=73.4
Q ss_pred CCCHHHH---HHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHh---cCCCEEEEeC
Q 027798 37 GLTVEGI---LENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKL---ASSRIYIVTS 110 (218)
Q Consensus 37 ~~s~~~i---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~---L~~~l~IvTn 110 (218)
-+|.+|. +..|++-...++-..+++..++.+...+.. ..+..|..++.+. .++++.|.|.
T Consensus 97 ~ltieEKvp~MeeWW~kSH~Lliq~~f~k~~I~~~Va~s~--------------i~lReg~~~ff~~L~~~~IP~~iFSA 162 (298)
T KOG3128|consen 97 VLTIEEKVPHMEEWWTKSHELLIQGGFSKNAIDDIVAESN--------------IALREGYEEFFEALQAHEIPLLIFSA 162 (298)
T ss_pred CCChhhhchHHHHHHhcccceeecCCcCHHHHHHHHHHhh--------------HHHHHHHHHHHHHHHhCCCceEEEec
Confidence 3455543 444554444444455555555444443322 1234555555544 4679999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCeeEeC-----CCC-----ChH--------H-HHHH----hhhcCCCCCCceEEEcCchh
Q 027798 111 NQSRFVETLLRELAGVTITPDRLYGL-----GTG-----PKV--------N-VLKQ----LQKKPEHQGLRLHFVEDRLA 167 (218)
Q Consensus 111 ~~~~~~~~~L~~~~gl~~~fd~i~~~-----~~~-----pKP--------e-~l~~----l~~~~~~~~~e~l~IGDs~~ 167 (218)
+-.+.++.++.+ ......+-.++|. +++ .+| + +++. +.. -.....+++-||+..
T Consensus 163 GigdiiEev~~q-~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~s~yf~~--~~~~~nVillGdsig 239 (298)
T KOG3128|consen 163 GIGDIIEEVTRQ-KLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNESEYFHQ--LAGRVNVILLGDSIG 239 (298)
T ss_pred chHHHHHHHHHH-HhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHhhhHHHhh--ccCCceEEEeccccc
Confidence 999999888876 4333223333332 111 222 2 3332 211 112344999999999
Q ss_pred hHHhccccccccCc-cEEEEeCCCCCHHH
Q 027798 168 TLKNVIKEPELDGW-NLYLVDWGYNTPKE 195 (218)
Q Consensus 168 Di~aA~~~~~~aGi-~~i~v~~G~~~~~~ 195 (218)
|+.+|- ...++ ...-+.++....++
T Consensus 240 dl~ma~---gv~~~~~iLkig~l~d~vee 265 (298)
T KOG3128|consen 240 DLHMAD---GVPRVGHILKIGYLNDSVEE 265 (298)
T ss_pred cchhhc---CCcccccceeeecccchHHH
Confidence 999982 11222 33445555555444
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=82.65 E-value=2.5 Score=36.91 Aligned_cols=48 Identities=19% Similarity=0.143 Sum_probs=41.2
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT 138 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~ 138 (218)
.-|.|.+.|.+| +..+++=|.++++.+...|+. ++|.++||.|+|...
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~-~~L~~~Fd~ii~~G~ 193 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE-LKLEGYFDIIICGGN 193 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH-hCCccccEEEEeCCc
Confidence 447777777777 458899999999999999999 999999999998764
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=82.60 E-value=7.1 Score=32.16 Aligned_cols=89 Identities=17% Similarity=0.111 Sum_probs=56.7
Q ss_pred CCcccHHHHHHhc--CCCEEEEeCCchHHHHHHHHHhcCCCCC--CCe--eEeCC---------CC---ChHHHHHHhhh
Q 027798 89 RLYPGVSDALKLA--SSRIYIVTSNQSRFVETLLRELAGVTIT--PDR--LYGLG---------TG---PKVNVLKQLQK 150 (218)
Q Consensus 89 ~l~~gv~e~L~~L--~~~l~IvTn~~~~~~~~~L~~~~gl~~~--fd~--i~~~~---------~~---pKPe~l~~l~~ 150 (218)
..-|++.++|+.+ ...++|-|.++...++.+++. +|+... +.. +..+. .+ -|+ |..+..
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd--L~~lw~ 121 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP--LGVIWA 121 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEee--cHHhhh
Confidence 4569999999988 469999999999999999998 876432 111 22111 11 222 222211
Q ss_pred cC--CCCCCceEEEcCchhhHHhccccccccCccEE
Q 027798 151 KP--EHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 151 ~~--~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
+. .-+.+.+++|+|++.-...- =..|+..-
T Consensus 122 ~l~~~~~~~ntiiVDd~p~~~~~~----P~N~i~I~ 153 (195)
T TIGR02245 122 LLPEFYSMKNTIMFDDLRRNFLMN----PQNGLKIR 153 (195)
T ss_pred hcccCCCcccEEEEeCCHHHHhcC----CCCccccC
Confidence 11 11445699999999876655 45577654
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=81.11 E-value=10 Score=39.61 Aligned_cols=33 Identities=15% Similarity=0.354 Sum_probs=25.6
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLR 121 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~ 121 (218)
++-+|+.++++.| |+++.++|+...+.+..+-.
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 6889999999887 56899999877766655533
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=80.65 E-value=2.6 Score=35.96 Aligned_cols=41 Identities=27% Similarity=0.187 Sum_probs=34.5
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP 130 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f 130 (218)
...+++.++|+.| |++++|+||++...+...++. +|+..+|
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~ 64 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPF 64 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCE
Confidence 4567788888876 579999999999999999999 9987655
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.45 E-value=4.1 Score=38.63 Aligned_cols=84 Identities=13% Similarity=0.145 Sum_probs=63.0
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHhhhcCCCCCCceEE
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~~~~~~~e~l~ 161 (218)
...||++|-+.+| +++...+|+.++-.+..+-.. .|+++|.. + .+|| .+++-+.+-.. +-|
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiA-----e--atPEdK~~~I~~eQ~~grl----VAM 514 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIA-----E--ATPEDKLALIRQEQAEGRL----VAM 514 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhh-----c--CChHHHHHHHHHHHhcCcE----EEE
Confidence 4669999998876 679999999999999999888 89876543 2 3454 77777766667 999
Q ss_pred EcCchhhHHhccccccccCccEEEEeCC
Q 027798 162 VEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 162 IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
.||..||--|= .+|.+ .++.+.|
T Consensus 515 tGDGTNDAPAL----AqAdV-g~AMNsG 537 (681)
T COG2216 515 TGDGTNDAPAL----AQADV-GVAMNSG 537 (681)
T ss_pred cCCCCCcchhh----hhcch-hhhhccc
Confidence 99999998776 45554 2334444
|
|
| >KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] | Back alignment and domain information |
|---|
Probab=80.40 E-value=2.4 Score=41.03 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=42.1
Q ss_pred cCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCC-CCCC-CeeEeCCCC
Q 027798 87 ANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGV-TITP-DRLYGLGTG 139 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl-~~~f-d~i~~~~~~ 139 (218)
.+++-|++.++|+++. ..++|.|-+++.++..+++- +.- ..|| |.|+|.+..
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~l-iDP~~~lF~dRIisrde~ 254 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKL-IDPEGKYFGDRIISRDES 254 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHH-hCCCCccccceEEEecCC
Confidence 3578899999999986 49999999999999999887 543 2455 779998754
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 218 | |||
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.87 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.84 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.82 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.82 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.81 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.81 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.8 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.79 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.78 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.77 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.77 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.76 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.76 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.76 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.75 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.74 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.74 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.74 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.74 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.73 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.73 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.72 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.72 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.72 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.72 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.71 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.71 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.71 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.71 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.71 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.71 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.7 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.7 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.7 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.69 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.69 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.69 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.69 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.69 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.69 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.67 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.67 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.67 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.67 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.67 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.66 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.66 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.66 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.65 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.64 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.64 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.64 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.64 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.64 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.63 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.61 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.61 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.6 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.59 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.58 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.57 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.56 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.56 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.54 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.54 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.53 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.52 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.49 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.47 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.46 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.46 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.44 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.43 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.43 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.43 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.42 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.42 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.41 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.4 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.38 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.36 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.36 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.32 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.31 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 98.99 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.31 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.29 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.29 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.28 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.28 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.26 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.2 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.19 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.19 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.19 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.18 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.18 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.17 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.14 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.12 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.11 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.11 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.11 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.07 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.04 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.04 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.04 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.0 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.95 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.94 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.93 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 98.92 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.83 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.78 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.74 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.65 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.61 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.21 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.19 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 98.15 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.14 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.13 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.0 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.99 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 97.95 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 97.92 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 97.92 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.87 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 97.83 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 97.83 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 97.8 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 97.79 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.68 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.64 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 97.63 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.53 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.51 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.4 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.4 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.19 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 96.96 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 96.79 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.73 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 96.71 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 96.7 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 96.68 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.59 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 96.58 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 96.54 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 96.42 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.34 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 96.31 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.04 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 95.89 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.53 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 92.96 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 92.96 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 92.76 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 92.2 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 88.86 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 83.65 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 83.07 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 82.05 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 81.0 |
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=159.06 Aligned_cols=120 Identities=16% Similarity=0.260 Sum_probs=101.8
Q ss_pred cCCCcccHHHHHHhc--CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC---ChHH----HHHHhhhcCCCCCC
Q 027798 87 ANRLYPGVSDALKLA--SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---PKVN----VLKQLQKKPEHQGL 157 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L--~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---pKPe----~l~~l~~~~~~~~~ 157 (218)
...++||+.++|+.| +.+++|+||+++..++..|++ +|+..+|+.|++++ . |||+ ++++++++| +
T Consensus 82 ~~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~-~~~Kp~p~~~~~~~~~lg~~p----~ 155 (210)
T 2ah5_A 82 EAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKN-LEIHHFFDGIYGSS-PEAPHKADVIHQALQTHQLAP----E 155 (210)
T ss_dssp SCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEEC-SSCCSHHHHHHHHHHHTTCCG----G
T ss_pred CCCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHh-cCchhheeeeecCC-CCCCCChHHHHHHHHHcCCCc----c
Confidence 457999999999877 579999999999999999999 99999999999887 4 8888 555556555 4
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
+|+||||+.+|+++| +++|+++++|.||++..+++....++ +.+.++.||.+.++
T Consensus 156 ~~~~vgDs~~Di~~a----~~aG~~~i~v~~~~~~~~~l~~~~a~--~v~~~~~el~~~l~ 210 (210)
T 2ah5_A 156 QAIIIGDTKFDMLGA----RETGIQKLAITWGFGEQADLLNYQPD--YIAHKPLEVLAYFQ 210 (210)
T ss_dssp GEEEEESSHHHHHHH----HHHTCEEEEESSSSSCHHHHHTTCCS--EEESSTTHHHHHTC
T ss_pred cEEEECCCHHHHHHH----HHCCCcEEEEcCCCCCHHHHHhCCCC--EEECCHHHHHHHhC
Confidence 599999999999999 99999999999999877776555566 56679999988764
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.8e-21 Score=153.82 Aligned_cols=121 Identities=21% Similarity=0.204 Sum_probs=100.9
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
.....++||+.++|+.| +.+++|+||+++..+...++. +|+..+||.+++++.. |+|+ ++++++++|+
T Consensus 80 ~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~-~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~ 158 (216)
T 3kbb_A 80 SELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRR-LDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPE 158 (216)
T ss_dssp HHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGG
T ss_pred HHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHh-cCCCccccccccccccCCCcccHHHHHHHHHhhCCCcc
Confidence 34568999999999987 579999999999999999999 9999999999988643 5555 7777777666
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEE-EEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLY-LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i-~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+ |+||||+.+|+++| +++||++| ++.||++..+.+..+++..+. ++.++++.|
T Consensus 159 e----~l~VgDs~~Di~aA----~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~---~~~eli~~l 212 (216)
T 3kbb_A 159 K----VVVFEDSKSGVEAA----KSAGIERIYGVVHSLNDGKALLEAGAVALV---KPEEILNVL 212 (216)
T ss_dssp G----EEEEECSHHHHHHH----HHTTCCCEEEECCSSSCCHHHHHTTCSEEE---CGGGHHHHH
T ss_pred c----eEEEecCHHHHHHH----HHcCCcEEEEecCCCCCHHHHHhCCCcEEC---CHHHHHHHH
Confidence 6 99999999999999 99999998 589999998888877766333 456665544
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=145.59 Aligned_cols=145 Identities=16% Similarity=0.197 Sum_probs=115.1
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE
Q 027798 58 WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 134 (218)
Q Consensus 58 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~ 134 (218)
.+++.+.+......+.+.+ .........++||+.++|+.| +.+++|+||+....++..++. +|+..+|+.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~ 133 (226)
T 3mc1_A 59 YNFDEETATVAIDYYRDYF----KAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEH-FKLAFYFDAIV 133 (226)
T ss_dssp HCCCHHHHHHHHHHHHHHH----TTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEE
T ss_pred hCCCHHHHHHHHHHHHHHH----HHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCHhheeeee
Confidence 3666655555555554443 222334568999999999988 479999999999999999999 99999999999
Q ss_pred eCCCC----ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceE
Q 027798 135 GLGTG----PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQ 206 (218)
Q Consensus 135 ~~~~~----pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~ 206 (218)
+++.. |||+ +++++++++ ++|+||||+.+|+.+| +++|+.+++|.||++..+.+....++ +.
T Consensus 134 ~~~~~~~~kp~~~~~~~~~~~lgi~~----~~~i~iGD~~~Di~~a----~~aG~~~i~v~~g~~~~~~~~~~~ad--~v 203 (226)
T 3mc1_A 134 GSSLDGKLSTKEDVIRYAMESLNIKS----DDAIMIGDREYDVIGA----LKNNLPSIGVTYGFGSYEELKNAGAN--YI 203 (226)
T ss_dssp EECTTSSSCSHHHHHHHHHHHHTCCG----GGEEEEESSHHHHHHH----HTTTCCEEEESSSSSCHHHHHHHTCS--EE
T ss_pred ccCCCCCCCCCHHHHHHHHHHhCcCc----ccEEEECCCHHHHHHH----HHCCCCEEEEccCCCCHHHHHHcCCC--EE
Confidence 88643 7887 555555554 4599999999999999 99999999999999888877666777 56
Q ss_pred EechhhHhhhc
Q 027798 207 LLQLSDFCTKL 217 (218)
Q Consensus 207 ~~~l~el~~~~ 217 (218)
+.++.||.+++
T Consensus 204 ~~s~~el~~~~ 214 (226)
T 3mc1_A 204 VNSVDELHKKI 214 (226)
T ss_dssp ESSHHHHHHHH
T ss_pred ECCHHHHHHHH
Confidence 66999998765
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.3e-20 Score=152.01 Aligned_cols=141 Identities=13% Similarity=0.191 Sum_probs=108.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC
Q 027798 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 137 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~ 137 (218)
+.+...+....+.+.|. ........++||+.++|+.| +.+++|+||+++..++..+++ +|+. +|+.+++++
T Consensus 86 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~-~f~~~~~~~ 159 (240)
T 2hi0_A 86 TQTEVNRVLEVFKPYYA----DHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEE-LFPG-SFDFALGEK 159 (240)
T ss_dssp CHHHHHHHHHHHHHHHH----HTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HSTT-TCSEEEEEC
T ss_pred CHHHHHHHHHHHHHHHH----HhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCc-ceeEEEecC
Confidence 44444444444444432 22234467999999999987 469999999999999999999 9999 999999876
Q ss_pred CC----ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEec
Q 027798 138 TG----PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 209 (218)
Q Consensus 138 ~~----pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~ 209 (218)
.. |||+ ++++++++|++ |+||||+.+|+++| +++|+.+++|.||++..+++....++. .+.+
T Consensus 160 ~~~~~Kp~p~~~~~~~~~l~~~~~~----~~~vGDs~~Di~~a----~~aG~~~v~v~~~~~~~~~~~~~~a~~--~~~~ 229 (240)
T 2hi0_A 160 SGIRRKPAPDMTSECVKVLGVPRDK----CVYIGDSEIDIQTA----RNSEMDEIAVNWGFRSVPFLQKHGATV--IVDT 229 (240)
T ss_dssp TTSCCTTSSHHHHHHHHHHTCCGGG----EEEEESSHHHHHHH----HHTTCEEEEESSSSSCHHHHHHTTCCC--EECS
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHHH----eEEEcCCHHHHHHH----HHCCCeEEEECCCCCchhHHHhcCCCE--EECC
Confidence 43 7777 55666665555 99999999999999 999999999999988766665556664 4559
Q ss_pred hhhHhhhc
Q 027798 210 LSDFCTKL 217 (218)
Q Consensus 210 l~el~~~~ 217 (218)
+.|+.+.|
T Consensus 230 ~~el~~~l 237 (240)
T 2hi0_A 230 AEKLEEAI 237 (240)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987765
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=146.16 Aligned_cols=121 Identities=21% Similarity=0.291 Sum_probs=103.4
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.| +.+++|+||+....++..+++ +|+..+|+.+++++.. |||+ ++++++++++
T Consensus 101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~- 178 (237)
T 4ex6_A 101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAEL-TGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPE- 178 (237)
T ss_dssp GGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGG-
T ss_pred cCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHH-
Confidence 4567999999999988 469999999999999999999 9999999999998753 6777 5555665554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+|+||||+.+|+.+| +++|+.+++|.+|++..+++....++ +.+.++.||.+.|
T Consensus 179 ---~~i~vGD~~~Di~~a----~~aG~~~i~v~~g~~~~~~~~~~~ad--~v~~~~~el~~~l 232 (237)
T 4ex6_A 179 ---RCVVIGDGVPDAEMG----RAAGMTVIGVSYGVSGPDELMRAGAD--TVVDSFPAAVTAV 232 (237)
T ss_dssp ---GEEEEESSHHHHHHH----HHTTCEEEEESSSSSCHHHHHHTTCS--EEESSHHHHHHHH
T ss_pred ---HeEEEcCCHHHHHHH----HHCCCeEEEEecCCCCHHHHHhcCCC--EEECCHHHHHHHH
Confidence 499999999999999 99999999999999887877766777 5666999998876
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=141.44 Aligned_cols=146 Identities=14% Similarity=0.013 Sum_probs=113.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC
Q 027798 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 137 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~ 137 (218)
+.+.+......+.+.|. .......++||+.++|+.| +.+++|+||++...++..++. +|+..+|+.+++++
T Consensus 68 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~ 141 (233)
T 3s6j_A 68 TDEQAERLSEKHAQAYE-----RLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKA-LKLDINKINIVTRD 141 (233)
T ss_dssp CHHHHHHHHHHHHHHHH-----HTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHT-TTCCTTSSCEECGG
T ss_pred CHHHHHHHHHHHHHHHH-----HhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHh-cchhhhhheeeccc
Confidence 34444444444444332 2234568999999999987 479999999999999999999 99999999999886
Q ss_pred CC----ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 138 TG----PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 138 ~~----pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
.. |||++++.+....+.+|++|+||||+.+|+.+| +++|+.+++|.+|++..+++...+++ +.+.++.||
T Consensus 142 ~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a----~~aG~~~i~v~~g~~~~~~l~~~~ad--~v~~~~~el 215 (233)
T 3s6j_A 142 DVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAA----RRCKATGVGLLSGGYDIGELERAGAL--RVYEDPLDL 215 (233)
T ss_dssp GSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHH----HHTTCEEEEEGGGSCCHHHHHHTTCS--EEESSHHHH
T ss_pred cCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHH----HHCCCEEEEEeCCCCchHhHHhcCCC--EEECCHHHH
Confidence 43 677744444444444555699999999999999 99999999999998888888777777 566699999
Q ss_pred hhhcC
Q 027798 214 CTKLK 218 (218)
Q Consensus 214 ~~~~~ 218 (218)
.+.|+
T Consensus 216 ~~~l~ 220 (233)
T 3s6j_A 216 LNHLD 220 (233)
T ss_dssp HHTGG
T ss_pred HHHHH
Confidence 88763
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.4e-19 Score=144.47 Aligned_cols=146 Identities=20% Similarity=0.214 Sum_probs=116.0
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE
Q 027798 58 WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 134 (218)
Q Consensus 58 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~ 134 (218)
.+++.+.+......+.+.+. ........++||+.++|+.| +.+++|+||++...++..++. +|+..+|+.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~ 157 (240)
T 3sd7_A 83 YKFEDKKAKEAVEKYREYFA----DKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRY-FDIDRYFKYIA 157 (240)
T ss_dssp SCCCHHHHHHHHHHHHHHHH----HTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEE
T ss_pred hCCCHHHHHHHHHHHHHHHH----HhcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH-cCcHhhEEEEE
Confidence 46666666555555555442 22334567999999999987 479999999999999999999 99999999999
Q ss_pred eCCCC----ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceE
Q 027798 135 GLGTG----PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQ 206 (218)
Q Consensus 135 ~~~~~----pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~ 206 (218)
+++.. |||+ ++++++++ +|++|+||||+.+|+.+| +++|+.+++|.||++..+.+....++ +.
T Consensus 158 ~~~~~~~~kp~~~~~~~~~~~~g~~---~~~~~i~vGD~~~Di~~a----~~aG~~~i~v~~g~~~~~~~~~~~ad--~v 228 (240)
T 3sd7_A 158 GSNLDGTRVNKNEVIQYVLDLCNVK---DKDKVIMVGDRKYDIIGA----KKIGIDSIGVLYGYGSFEEISESEPT--YI 228 (240)
T ss_dssp EECTTSCCCCHHHHHHHHHHHHTCC---CGGGEEEEESSHHHHHHH----HHHTCEEEEESSSSCCHHHHHHHCCS--EE
T ss_pred eccccCCCCCCHHHHHHHHHHcCCC---CCCcEEEECCCHHHHHHH----HHCCCCEEEEeCCCCCHHHHhhcCCC--EE
Confidence 88643 7777 55555554 055599999999999999 99999999999999988877666777 66
Q ss_pred EechhhHhhhc
Q 027798 207 LLQLSDFCTKL 217 (218)
Q Consensus 207 ~~~l~el~~~~ 217 (218)
+.++.||.+.|
T Consensus 229 ~~~~~el~~~l 239 (240)
T 3sd7_A 229 VENVESIKDIL 239 (240)
T ss_dssp ESSSTTHHHHH
T ss_pred ECCHHHHHHHh
Confidence 66999998876
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=143.65 Aligned_cols=143 Identities=15% Similarity=0.025 Sum_probs=109.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC-CCeeEeC
Q 027798 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT-PDRLYGL 136 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~-fd~i~~~ 136 (218)
+.+.+......+.+.+. ..+.....++||+.++|+.| +.+++|+||++...++..++. +|+..+ |+.++++
T Consensus 87 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~-~~~~~~~~~~~~~~ 161 (277)
T 3iru_A 87 NEEDIKRLYDLFAPIQT----RIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIA-AKEQGYTPASTVFA 161 (277)
T ss_dssp CHHHHHHHHHHHHHHHH----HHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HHHTTCCCSEEECG
T ss_pred CHHHHHHHHHHHHHHHH----HHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHh-cCcccCCCceEecH
Confidence 44555555555554442 22334578999999999987 469999999999999999999 999888 9999988
Q ss_pred CCC----ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC-----------------
Q 027798 137 GTG----PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN----------------- 191 (218)
Q Consensus 137 ~~~----pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~----------------- 191 (218)
+.. |||+ +++++++++ +++|+||||+.+|+.+| +++|+.+++|.||++
T Consensus 162 ~~~~~~kp~~~~~~~~~~~lgi~~---~~~~i~vGD~~~Di~~a----~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~ 234 (277)
T 3iru_A 162 TDVVRGRPFPDMALKVALELEVGH---VNGCIKVDDTLPGIEEG----LRAGMWTVGVSCSGNEVGLDREDWQALSSDEQ 234 (277)
T ss_dssp GGSSSCTTSSHHHHHHHHHHTCSC---GGGEEEEESSHHHHHHH----HHTTCEEEEECSSSTTTCCCHHHHHHSCHHHH
T ss_pred HhcCCCCCCHHHHHHHHHHcCCCC---CccEEEEcCCHHHHHHH----HHCCCeEEEEecCCcccccchhhhhhcchhhh
Confidence 643 6666 555566554 04599999999999999 999999999999986
Q ss_pred ------CHHHHHhhcCCCceEEechhhHhhhc
Q 027798 192 ------TPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 192 ------~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..+++...+|+ +.+.++.||.++|
T Consensus 235 ~~~~~~~~~~l~~~~ad--~v~~~~~el~~~l 264 (277)
T 3iru_A 235 QSYRQHAEQRLFNAGAH--YVIDSVADLETVI 264 (277)
T ss_dssp HHHHHHHHHHHHHHTCS--EEESSGGGTHHHH
T ss_pred hhhhhhhHHHHhhCCCC--EEecCHHHHHHHH
Confidence 34556666777 5666999988765
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.78 E-value=8.1e-19 Score=141.00 Aligned_cols=167 Identities=14% Similarity=0.152 Sum_probs=118.2
Q ss_pred CCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhcC--CCEEEEeCCchHH
Q 027798 38 LTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLAS--SRIYIVTSNQSRF 115 (218)
Q Consensus 38 ~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~ 115 (218)
.+.+.+...++.....+++..+.+.+.+...+..+.+.+ .. +.....++||+.++|+.|+ .+++|+||++...
T Consensus 37 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~ 111 (209)
T 2hdo_A 37 FSPAQAQKTFPMAAEQAMTELGIAASEFDHFQAQYEDVM----AS-HYDQIELYPGITSLFEQLPSELRLGIVTSQRRNE 111 (209)
T ss_dssp CCHHHHHHHTTSCHHHHHHHTTCCGGGHHHHHHHHHHHH----TT-CGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHH
T ss_pred CCHHHHHHHcCCcHHHHHHHcCCCHHHHHHHHHHHHHHH----hh-hcccCCcCCCHHHHHHHHHhcCcEEEEeCCCHHH
Confidence 455555554444445555666665444444443332222 11 2345679999999999886 4899999999999
Q ss_pred HHHHHHHhcCCCCCCCeeEeCCCC--Ch--HHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 116 VETLLRELAGVTITPDRLYGLGTG--PK--VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 116 ~~~~L~~~~gl~~~fd~i~~~~~~--pK--Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
++..+++ +|+..+|+.+++++.. .| |+++..+....+.+|++|+||||+.+|+.+| +++|+.++++.||+.
T Consensus 112 ~~~~l~~-~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a----~~aG~~~~~~~~~~~ 186 (209)
T 2hdo_A 112 LESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTA----QAANVDFGLAVWGMD 186 (209)
T ss_dssp HHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHH----HHHTCEEEEEGGGCC
T ss_pred HHHHHHH-cChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHH----HHcCCeEEEEcCCCC
Confidence 9999999 9999999999988643 55 6644333333334455599999999999999 999999999999987
Q ss_pred CHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 192 TPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 192 ~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
..+.+.. ++ +.+.++.||.+.|+
T Consensus 187 ~~~~~~~--a~--~~~~~~~el~~~l~ 209 (209)
T 2hdo_A 187 PNADHQK--VA--HRFQKPLDILELFK 209 (209)
T ss_dssp TTGGGSC--CS--EEESSGGGGGGGC-
T ss_pred Chhhhcc--CC--EEeCCHHHHHHhhC
Confidence 6555432 44 66779999988774
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-18 Score=142.53 Aligned_cols=122 Identities=19% Similarity=0.287 Sum_probs=100.4
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.| +.+++|+||++...++..+++ +|+..+|+.+++++.. |+|+ +++++++.+++
T Consensus 111 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 189 (243)
T 2hsz_A 111 NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQ 189 (243)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred ccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHH-cCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhh
Confidence 4467999999999987 469999999999999999999 9999999999988643 6665 55566655544
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
|+||||+.+|+.+| +++|+.+++|.||++...++....++ +.+.++.||.++++
T Consensus 190 ----~~~vGD~~~Di~~a----~~aG~~~i~v~~g~~~~~~~~~~~ad--~vi~~~~el~~~l~ 243 (243)
T 2hsz_A 190 ----ILFVGDSQNDIFAA----HSAGCAVVGLTYGYNYNIPIAQSKPD--WIFDDFADILKITQ 243 (243)
T ss_dssp ----EEEEESSHHHHHHH----HHHTCEEEEESSSCSTTCCGGGGCCS--EEESSGGGGGGGTC
T ss_pred ----EEEEcCCHHHHHHH----HHCCCeEEEEcCCCCchhhhhhCCCC--EEECCHHHHHHHhC
Confidence 99999999999999 99999999999998754444444555 66679999988775
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.77 E-value=7e-19 Score=146.35 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=93.6
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~ 156 (218)
..++||+.++|+.| +.+++|+||+.. ....|++ +|+..+||.|++++.. |+|+ ++++++++|++
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e-- 168 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAA-LELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQA-- 168 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHH-TTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGG--
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhh-hhhccccccccccccccCCCCcHHHHHHHHHHcCCChHH--
Confidence 46899999999987 568999998765 4677999 9999999999998654 5555 77888877666
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+.+|+++| ++|||++|+|.||+...+.+....++ +.+.++.++.+.+
T Consensus 169 --~l~VgDs~~di~aA----~~aG~~~I~V~~g~~~ad~~~~~~~~--l~~~~l~~~~~~l 221 (243)
T 4g9b_A 169 --CIGIEDAQAGIDAI----NASGMRSVGIGAGLTGAQLLLPSTES--LTWPRLSAFWQNV 221 (243)
T ss_dssp --EEEEESSHHHHHHH----HHHTCEEEEESTTCCSCSEEESSGGG--CCHHHHHHHHHHH
T ss_pred --EEEEcCCHHHHHHH----HHcCCEEEEECCCCCcHHHhcCChhh--cCHHHHHHHHHHH
Confidence 99999999999999 99999999999998865544333443 4555777776554
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=139.66 Aligned_cols=122 Identities=15% Similarity=0.139 Sum_probs=96.6
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCch---HHHHHHHHHhcCCCCCCCeeEeCCC-----C---ChHH----HHHHh
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQS---RFVETLLRELAGVTITPDRLYGLGT-----G---PKVN----VLKQL 148 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~---~~~~~~L~~~~gl~~~fd~i~~~~~-----~---pKPe----~l~~l 148 (218)
...++||+.++|+.| |.+++|+||++. ..+...|++ +|+..+|+.|++++. + |+|+ +++++
T Consensus 32 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN-FGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-TTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred CceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh-cCchhheEEEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 468999999999988 479999999987 899999999 999999999999853 3 5666 66666
Q ss_pred hhcCCCCCCceEEEcCc-hhhHHhccccccccCccEEEEeCCCCC--HHHHHhhcCCCceEEechhhHhhhc
Q 027798 149 QKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNT--PKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs-~~Di~aA~~~~~~aGi~~i~v~~G~~~--~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++++++ |+||||+ .+|+.+| +++||.+++|.+|... .+.+....|+.++..-++.+|.++|
T Consensus 111 ~~~~~~----~l~VGD~~~~Di~~A----~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 111 QIDKTE----AVMVGNTFESDIIGA----NRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp TCCGGG----EEEEESBTTTTHHHH----HHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred CCCccc----EEEECCCcHHHHHHH----HHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 665554 9999999 6999999 9999999999998763 2333334666555533777776654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-17 Score=134.13 Aligned_cols=121 Identities=13% Similarity=0.001 Sum_probs=96.5
Q ss_pred hcCCCcccHHHHHHhc----CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC---ChH--H----HHHHhh--h
Q 027798 86 GANRLYPGVSDALKLA----SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---PKV--N----VLKQLQ--K 150 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L----~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---pKP--e----~l~~l~--~ 150 (218)
....++||+.++|+.| +.+++|+||++...+...++. +|+..+|+.+++++.. +|| + ++++++ .
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~ 168 (234)
T 2hcf_A 90 EDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDALDRNELPHIALERARRMTGANY 168 (234)
T ss_dssp GGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred CCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHH-CCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCC
Confidence 3457899999999987 357999999999999999999 9999999987766543 444 3 345555 4
Q ss_pred cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 151 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++ ++|+||||+.+|+.+| +++|+.+++|.+|+...+.+...+++ +.+.++.||.+.|
T Consensus 169 ~~----~~~i~iGD~~~Di~~a----~~aG~~~i~v~~~~~~~~~~~~~~a~--~v~~~~~el~~~l 225 (234)
T 2hcf_A 169 SP----SQIVIIGDTEHDIRCA----RELDARSIAVATGNFTMEELARHKPG--TLFKNFAETDEVL 225 (234)
T ss_dssp CG----GGEEEEESSHHHHHHH----HTTTCEEEEECCSSSCHHHHHTTCCS--EEESCSCCHHHHH
T ss_pred Cc----ccEEEECCCHHHHHHH----HHCCCcEEEEcCCCCCHHHHHhCCCC--EEeCCHHhHHHHH
Confidence 44 4599999999999999 99999999999998887776555566 5556888877654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-18 Score=135.40 Aligned_cols=121 Identities=15% Similarity=0.142 Sum_probs=94.0
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCCCCeeE-----eCCC-C--
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLY-----GLGT-G-- 139 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~fd~i~-----~~~~-~-- 139 (218)
....++||+.++|+.| |.+++|+||++. ..+...|++ +| .+|+.++ +++. .
T Consensus 24 ~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g--~~~~~~~~~~~~~~~~~~~~ 100 (179)
T 3l8h_A 24 DEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQ-MG--GVVDAIFMCPHGPDDGCACR 100 (179)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHH-TT--CCCCEEEEECCCTTSCCSSS
T ss_pred HHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHh-CC--CceeEEEEcCCCCCCCCCCC
Confidence 3468999999999988 579999999997 677888888 88 5667665 2332 2
Q ss_pred -ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 140 -PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 140 -pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
|+|+ +++++++++++ |+||||+.+|+++| +++||++++|.||++..+.+....+.+.+.+.++.||.
T Consensus 101 KP~~~~~~~~~~~~~~~~~~----~~~vGD~~~Di~~a----~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~ 172 (179)
T 3l8h_A 101 KPLPGMYRDIARRYDVDLAG----VPAVGDSLRDLQAA----AQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVA 172 (179)
T ss_dssp TTSSHHHHHHHHHHTCCCTT----CEEEESSHHHHHHH----HHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHH----EEEECCCHHHHHHH----HHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHH
Confidence 5555 56666665555 99999999999999 99999999999998766655432344557778999998
Q ss_pred hhc
Q 027798 215 TKL 217 (218)
Q Consensus 215 ~~~ 217 (218)
+.|
T Consensus 173 ~~l 175 (179)
T 3l8h_A 173 EQL 175 (179)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.6e-18 Score=136.91 Aligned_cols=116 Identities=13% Similarity=0.003 Sum_probs=88.3
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...+|||+.++|+.| +++++|+||+++..+ ++. .+ .+|+.|+|++.. |+|+ +++++++.+
T Consensus 34 ~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~---~~~-~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~--- 104 (196)
T 2oda_A 34 HAQLTPGAQNALKALRDQGMPCAWIDELPEALS---TPL-AA--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQ--- 104 (196)
T ss_dssp GGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH---HHH-HT--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSC---
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH---HHh-cC--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCC---
Confidence 357999999999988 579999999998877 333 45 578999998643 6666 555566543
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCC-----------------------HHHHHhhcCCCceEEechhh
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSD 212 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~-----------------------~~~l~~~~~~~~i~~~~l~e 212 (218)
+++|+||||+.+|+++| ++|||.+|+|.||++. .+.+...+++ +.+.++.|
T Consensus 105 ~~~~v~VGDs~~Di~aA----~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d--~vi~~~~e 178 (196)
T 2oda_A 105 LEGCVLISGDPRLLQSG----LNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVH--SVIDHLGE 178 (196)
T ss_dssp STTCEEEESCHHHHHHH----HHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS--EEESSGGG
T ss_pred CccEEEEeCCHHHHHHH----HHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCC--EEeCCHHH
Confidence 24599999999999999 9999999999999862 2233445565 55668988
Q ss_pred Hhhhc
Q 027798 213 FCTKL 217 (218)
Q Consensus 213 l~~~~ 217 (218)
|.+.|
T Consensus 179 L~~~l 183 (196)
T 2oda_A 179 LESCL 183 (196)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.4e-18 Score=139.04 Aligned_cols=118 Identities=20% Similarity=0.267 Sum_probs=97.2
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.| +.+++|+||++...++..++. +|+..+|+.+++++.. |||+ ++++++++++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~- 157 (222)
T 2nyv_A 80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDI-LNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPE- 157 (222)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGG-
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCch-
Confidence 4567999999999987 469999999999999999999 9999999999987643 7777 5555665544
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+|+||||+.+|+.+| +++|+.+++|.||++.++. ..+ .+.+.++.++.+.+
T Consensus 158 ---~~~~vGD~~~Di~~a----~~aG~~~i~v~~g~~~~~~---~~~--~~~~~~~~el~~~l 208 (222)
T 2nyv_A 158 ---KALIVGDTDADIEAG----KRAGTKTALALWGYVKLNS---QIP--DFTLSRPSDLVKLM 208 (222)
T ss_dssp ---GEEEEESSHHHHHHH----HHHTCEEEEETTSSCSCCC---CCC--SEEESSTTHHHHHH
T ss_pred ---hEEEECCCHHHHHHH----HHCCCeEEEEcCCCCCccc---cCC--CEEECCHHHHHHHH
Confidence 499999999999999 9999999999999875432 334 46677999987765
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=136.19 Aligned_cols=121 Identities=17% Similarity=0.156 Sum_probs=99.2
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.| +.+++|+||++...+...++. +|+..+|+.+++++.. |+|+ ++++++++++
T Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~- 168 (241)
T 2hoq_A 91 AYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILR-LELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPE- 168 (241)
T ss_dssp HHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGG-
T ss_pred hhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHH-cCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcc-
Confidence 3467999999999987 579999999999999999999 9999999999987642 7777 5555665554
Q ss_pred CCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHH-hhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERA-EAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~-~~~~~~~i~~~~l~el~~~~ 217 (218)
+|+||||+. +|+.+| +++|+.+++|.||+..++.+. ...++ +.+.++.||.+.|
T Consensus 169 ---~~i~iGD~~~~Di~~a----~~aG~~~~~v~~g~~~~~~~~~~~~~~--~~i~~~~el~~~l 224 (241)
T 2hoq_A 169 ---EALMVGDRLYSDIYGA----KRVGMKTVWFRYGKHSERELEYRKYAD--YEIDNLESLLEVL 224 (241)
T ss_dssp ---GEEEEESCTTTTHHHH----HHTTCEEEEECCSCCCHHHHTTGGGCS--EEESSTTHHHHHH
T ss_pred ---cEEEECCCchHhHHHH----HHCCCEEEEECCCCCCcccccccCCCC--EEECCHHHHHHHH
Confidence 499999998 999999 999999999999988776652 33555 5667999987765
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.6e-17 Score=131.56 Aligned_cols=123 Identities=14% Similarity=0.155 Sum_probs=98.2
Q ss_pred hhcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCc
Q 027798 85 IGANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e 158 (218)
.....++||+.++|+.++ .+++|+||++...+...++. +|+..+|+.+++++.. |||++++.+....+.+|++
T Consensus 103 ~~~~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 181 (240)
T 3qnm_A 103 PTKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRS-AGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRE 181 (240)
T ss_dssp GGCCCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGG
T ss_pred hhcCCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHH-cChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCccc
Confidence 355789999999999884 68999999999999999999 9999999999988643 7777444443333444555
Q ss_pred eEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+. +|+++| +++|+.++++.+|... .....+.+.+.++.|+.++.
T Consensus 182 ~~~iGD~~~~Di~~a----~~aG~~~~~~~~~~~~-----~~~~~~d~vi~sl~e~~~~~ 232 (240)
T 3qnm_A 182 SLMIGDSWEADITGA----HGVGMHQAFYNVTERT-----VFPFQPTYHIHSLKELMNLL 232 (240)
T ss_dssp EEEEESCTTTTHHHH----HHTTCEEEEECCSCCC-----CCSSCCSEEESSTHHHHHHT
T ss_pred EEEECCCchHhHHHH----HHcCCeEEEEcCCCCC-----CcCCCCceEECCHHHHHHHH
Confidence 99999996 999999 9999999999998761 12334457778999998764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-17 Score=135.18 Aligned_cols=123 Identities=12% Similarity=0.037 Sum_probs=100.5
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC--CeeEeCCCC----ChHHHHHHhhhcCCCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTG----PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f--d~i~~~~~~----pKPe~l~~l~~~~~~~~~ 157 (218)
...++||+.++|+.| +.+++|+||++...+...++. |+..+| +.+++++.. |||+++..+....+.+|+
T Consensus 107 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 184 (243)
T 3qxg_A 107 EAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH--NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKAD 184 (243)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH--HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGG
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH--hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHH
Confidence 467999999999987 479999999999988888886 999999 889988643 666644443333334555
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+|+||||+.+|+.+| +++|+.++++.+|+...+++....++ +.+.++.||.+.|
T Consensus 185 ~~i~vGD~~~Di~~a----~~aG~~~i~v~~~~~~~~~l~~~~ad--~v~~s~~el~~~l 238 (243)
T 3qxg_A 185 EAVVIENAPLGVEAG----HKAGIFTIAVNTGPLDGQVLLDAGAD--LLFPSMQTLCDSW 238 (243)
T ss_dssp GEEEEECSHHHHHHH----HHTTCEEEEECCSSSCHHHHHHTTCS--EEESCHHHHHHHH
T ss_pred HeEEEeCCHHHHHHH----HHCCCEEEEEeCCCCCHHHHHhcCCC--EEECCHHHHHHHH
Confidence 599999999999999 99999999999999888877766777 5666999998765
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.73 E-value=7.8e-18 Score=150.50 Aligned_cols=125 Identities=14% Similarity=0.004 Sum_probs=99.3
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC--eeEeCCC--------------C-ChHHHHH
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGT--------------G-PKVNVLK 146 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd--~i~~~~~--------------~-pKPe~l~ 146 (218)
...++||+.++|+.| |++++|+||+++..+...|++ +|+..+|+ .|++++. . |+|++..
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~-lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-cCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 347899999999988 579999999999999999999 99999999 8888642 3 6777333
Q ss_pred HhhhcCC--------------CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCC---HHHHHhhcCCCceEEec
Q 027798 147 QLQKKPE--------------HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT---PKERAEAASMPRIQLLQ 209 (218)
Q Consensus 147 ~l~~~~~--------------~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~---~~~l~~~~~~~~i~~~~ 209 (218)
......+ .+|++|+||||+.+|+++| ++|||.+++|.||++. .+++...+++ +.+.+
T Consensus 292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aA----k~AG~~~I~V~~g~~~~~~~~~l~~~~ad--~vi~s 365 (384)
T 1qyi_A 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSA----QKIGATFIGTLTGLKGKDAAGELEAHHAD--YVINH 365 (384)
T ss_dssp HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHH----HHHTCEEEEESCBTTBGGGHHHHHHTTCS--EEESS
T ss_pred HHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHH----HHcCCEEEEECCCccccccHHHHhhcCCC--EEECC
Confidence 3222222 4567799999999999999 9999999999999863 4455455666 66669
Q ss_pred hhhHhhhcC
Q 027798 210 LSDFCTKLK 218 (218)
Q Consensus 210 l~el~~~~~ 218 (218)
+.||.+.++
T Consensus 366 l~eL~~~l~ 374 (384)
T 1qyi_A 366 LGELRGVLD 374 (384)
T ss_dssp GGGHHHHHS
T ss_pred HHHHHHHHH
Confidence 999987763
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-17 Score=137.11 Aligned_cols=125 Identities=14% Similarity=0.082 Sum_probs=102.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCe-eEeCCC---C--ChHHHHHHhhhcCCCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDR-LYGLGT---G--PKVNVLKQLQKKPEHQG 156 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~-i~~~~~---~--pKPe~l~~l~~~~~~~~ 156 (218)
....++||+.++|+.| +.+++|+||++...++..++. +|+..+|+. +++++. . |||++++.+....+.+|
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 185 (259)
T 4eek_A 107 TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRV-AGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILP 185 (259)
T ss_dssp TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHH-TTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCG
T ss_pred ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHh-cChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCH
Confidence 4567999999999987 579999999999999999999 999999999 887642 2 66774444444444455
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeCCCCC----HHHHHhhcCCCceEEechhhHhhhc
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT----PKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~----~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++|+||||+.+|+++| +++|+.+++|.+|... .+++...+++ +.+.++.||.+.|
T Consensus 186 ~~~i~iGD~~~Di~~a----~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad--~vi~~l~el~~~l 244 (259)
T 4eek_A 186 ERCVVIEDSVTGGAAG----LAAGATLWGLLVPGHPHPDGAAALSRLGAA--RVLTSHAELRAAL 244 (259)
T ss_dssp GGEEEEESSHHHHHHH----HHHTCEEEEECCTTSCCSSCHHHHHHHTCS--EEECSHHHHHHHH
T ss_pred HHEEEEcCCHHHHHHH----HHCCCEEEEEccCCCcccccHHHHHhcCcc--hhhCCHHHHHHHH
Confidence 5599999999999999 9999999999998665 6667667777 5666999998765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.7e-17 Score=131.59 Aligned_cols=119 Identities=11% Similarity=0.156 Sum_probs=99.3
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...++||+.++|+.| +.+++|+||++...+...+++ +|+..+|+.+++++.. |+|+ +++++++++++
T Consensus 97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~- 174 (233)
T 3umb_A 97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKS-AGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQ- 174 (233)
T ss_dssp SCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHT-TTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGG-
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHH-CCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCccc-
Confidence 467999999999987 469999999999999999999 9999999999998643 6776 66666665555
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+.+|+.+| +++|+.++++.+|.+..+++ ...+.+.+.++.||.+.|
T Consensus 175 ---~~~vGD~~~Di~~a----~~~G~~~~~v~~~~~~~~~~---~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 175 ---ILFVSSNGWDACGA----TWHGFTTFWINRLGHPPEAL---DVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp ---EEEEESCHHHHHHH----HHHTCEEEEECTTCCCCCSS---SCCCSEEESSHHHHHHHH
T ss_pred ---EEEEeCCHHHHHHH----HHcCCEEEEEcCCCCCchhc---cCCCCEEECCHHHHHHHH
Confidence 99999999999999 99999999999987765443 333447777999998775
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.72 E-value=8.7e-17 Score=135.17 Aligned_cols=120 Identities=13% Similarity=0.084 Sum_probs=94.9
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
....++||+.++|+.|+ .+++|+||+++..+...|++ +|+..+|+.|++++.. |+|+ ++++++++|++
T Consensus 118 ~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~- 195 (260)
T 2gfh_A 118 QHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGD- 195 (260)
T ss_dssp HTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGG-
T ss_pred hcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHh-cCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhh-
Confidence 45689999999999884 69999999999999999999 9999999999887543 6666 55666665555
Q ss_pred CCceEEEcCc-hhhHHhccccccccCc-cEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 156 GLRLHFVEDR-LATLKNVIKEPELDGW-NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 156 ~~e~l~IGDs-~~Di~aA~~~~~~aGi-~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+ .+|+++| +++|| .++++.++.... ......+ .+.+.++.||.+.+
T Consensus 196 ---~~~vGDs~~~Di~~A----~~aG~~~~i~v~~~~~~~-~~~~~~~--~~~i~~~~el~~~l 249 (260)
T 2gfh_A 196 ---CVMVGDTLETDIQGG----LNAGLKATVWINKSGRVP-LTSSPMP--HYMVSSVLELPALL 249 (260)
T ss_dssp ---EEEEESCTTTHHHHH----HHTTCSEEEEECTTCCCC-SSCCCCC--SEEESSGGGHHHHH
T ss_pred ---EEEECCCchhhHHHH----HHCCCceEEEEcCCCCCc-CcccCCC--CEEECCHHHHHHHH
Confidence 9999995 8999999 99999 899998874321 1122334 46677898887654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-16 Score=126.55 Aligned_cols=127 Identities=15% Similarity=0.070 Sum_probs=98.8
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~ 157 (218)
.....++||+.++|+.+ +.+++|+||++...+...++. +|+..+|+.+++++.. |||+++..+....+.+++
T Consensus 85 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 163 (225)
T 3d6j_A 85 NANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRN-HMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPE 163 (225)
T ss_dssp GGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHT-SSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGG
T ss_pred cccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHH-cCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChH
Confidence 34567899999999877 568999999999999999999 9999999999987543 666644444333344555
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
++++|||+.+|+.+| +++|+.++++.+|++..+++...+++ +.+.++.|+.+.|+
T Consensus 164 ~~i~iGD~~nDi~~~----~~aG~~~~~~~~~~~~~~~l~~~~ad--~v~~~~~el~~~l~ 218 (225)
T 3d6j_A 164 EVLYIGDSTVDAGTA----AAAGVSFTGVTSGMTTAQEFQAYPYD--RIISTLGQLISVPE 218 (225)
T ss_dssp GEEEEESSHHHHHHH----HHHTCEEEEETTSSCCTTGGGGSCCS--EEESSGGGGC----
T ss_pred HeEEEcCCHHHHHHH----HHCCCeEEEECCCCCChHHHhhcCCC--EEECCHHHHHHhhh
Confidence 599999999999999 99999999999998877666555566 56669999887763
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.6e-17 Score=133.04 Aligned_cols=119 Identities=14% Similarity=0.077 Sum_probs=96.9
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC--CeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f--d~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
...++||+.++|+.| +.+++|+||++...+...+++ |+..+| +.+++++.. |||+ ++++++++++
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 183 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH--NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPN 183 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH--HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGG
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh--hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChh
Confidence 467999999999987 479999999999988888886 899999 989988643 6666 5555665554
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+|+||||+.+|+.+| +++|+.++++.+|+...+.+....++ +.+.++.||.+.|
T Consensus 184 ----~~i~vGD~~~Di~~a----~~aG~~~i~v~~~~~~~~~l~~~~ad--~v~~~~~el~~~l 237 (247)
T 3dv9_A 184 ----EALVIENAPLGVQAG----VAAGIFTIAVNTGPLHDNVLLNEGAN--LLFHSMPDFNKNW 237 (247)
T ss_dssp ----GEEEEECSHHHHHHH----HHTTSEEEEECCSSSCHHHHHTTTCS--EEESSHHHHHHHH
T ss_pred ----heEEEeCCHHHHHHH----HHCCCeEEEEcCCCCCHHHHHhcCCC--EEECCHHHHHHHH
Confidence 499999999999999 99999999999999888777666666 6666999987765
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.71 E-value=4e-17 Score=132.27 Aligned_cols=145 Identities=12% Similarity=0.150 Sum_probs=108.7
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 50 IKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 50 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
....++...+++.+..........+.+.. +.....++||+.++|+.|+ .+++|+||++.. ++. +|+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~-~~l~ 139 (230)
T 3vay_A 71 VLFHALEDAGYDSDEAQQLADESFEVFLH-----GRHQVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRR-LGLA 139 (230)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHHHHHH-----HHTCCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGG-STTG
T ss_pred HHHHHHHHhCCChhhhHHHHHHHHHHHHH-----hhccCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhh-cCcH
Confidence 33445566777766655555555444422 2345789999999999884 589999999875 788 9999
Q ss_pred CCCCeeEeCCC-C---ChHH----HHHHhhhcCCCCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHh
Q 027798 128 ITPDRLYGLGT-G---PKVN----VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 198 (218)
Q Consensus 128 ~~fd~i~~~~~-~---pKPe----~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~ 198 (218)
.+|+.+++++. + |||+ +++++++++ ++|+||||+. +|+.+| +++|+.+++|.+|+...+. .
T Consensus 140 ~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~----~~~~~vGD~~~~Di~~a----~~aG~~~~~v~~~~~~~~~--~ 209 (230)
T 3vay_A 140 DYFAFALCAEDLGIGKPDPAPFLEALRRAKVDA----SAAVHVGDHPSDDIAGA----QQAGMRAIWYNPQGKAWDA--D 209 (230)
T ss_dssp GGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCG----GGEEEEESCTTTTHHHH----HHTTCEEEEECTTCCCCCS--S
T ss_pred HHeeeeEEccccCCCCcCHHHHHHHHHHhCCCc----hheEEEeCChHHHHHHH----HHCCCEEEEEcCCCCCCcc--c
Confidence 99999998753 2 7777 555555554 4599999998 999999 9999999999999876543 3
Q ss_pred hcCCCceEEechhhHhhhc
Q 027798 199 AASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 199 ~~~~~~i~~~~l~el~~~~ 217 (218)
.. +.+.+.++.||.+.|
T Consensus 210 ~~--~~~~~~~l~el~~~l 226 (230)
T 3vay_A 210 RL--PDAEIHNLSQLPEVL 226 (230)
T ss_dssp SC--CSEEESSGGGHHHHH
T ss_pred CC--CCeeECCHHHHHHHH
Confidence 34 447777999998765
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-17 Score=139.00 Aligned_cols=117 Identities=13% Similarity=0.145 Sum_probs=92.2
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhc---CCCCCCCeeEeCCCC--ChHH----HHHHhhhcCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGLGTG--PKVN----VLKQLQKKPE 153 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~---gl~~~fd~i~~~~~~--pKPe----~l~~l~~~~~ 153 (218)
....+|||+.++|+.| |.+++|+||++...++..|++ + |+..+||.|++++.+ |+|+ ++++++++|+
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh-hcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcc
Confidence 3467999999999988 469999999999999999985 4 599999999987433 5566 6677777665
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
+ |+||||+.+|+++| +++||.+++|.|+.....+.....++ ..+.++.||
T Consensus 206 ~----~l~VgDs~~di~aA----~~aG~~~i~v~~~~~~~~~~~~~~~~--~~i~~l~el 255 (261)
T 1yns_A 206 N----ILFLTDVTREASAA----EEADVHVAVVVRPGNAGLTDDEKTYY--SLITSFSEL 255 (261)
T ss_dssp G----EEEEESCHHHHHHH----HHTTCEEEEECCTTCCCCCHHHHHHS--CEESSGGGC
T ss_pred c----EEEEcCCHHHHHHH----HHCCCEEEEEeCCCCCcccccccCCC--EEECCHHHh
Confidence 5 99999999999999 99999999998865543222234555 445588876
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=129.52 Aligned_cols=121 Identities=12% Similarity=0.205 Sum_probs=99.4
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.| +.+++|+||++...+...++. +|+..+|+.+++++.. |||+ ++++++.+++
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~- 170 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGN-SGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGES- 170 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGG-
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHH-CCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcc-
Confidence 4568999999999987 479999999999999999999 9999999999998643 7777 5555665544
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
+|+||||+.+|+.+| +++|+.++++.+|.+..+.+ ...+.+.+.++.||.+.|+
T Consensus 171 ---~~~~iGD~~~Di~~a----~~aG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~el~~~l~ 224 (230)
T 3um9_A 171 ---EILFVSCNSWDATGA----KYFGYPVCWINRSNGVFDQL---GVVPDIVVSDVGVLASRFS 224 (230)
T ss_dssp ---GEEEEESCHHHHHHH----HHHTCCEEEECTTSCCCCCS---SCCCSEEESSHHHHHHTCC
T ss_pred ---cEEEEeCCHHHHHHH----HHCCCEEEEEeCCCCccccc---cCCCcEEeCCHHHHHHHHH
Confidence 499999999999999 99999999999986654332 3344577779999988764
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-17 Score=137.67 Aligned_cols=118 Identities=19% Similarity=0.215 Sum_probs=95.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~~~~~ 156 (218)
..++||+.++|+.| +.+++|+||++.. +...++. +|+..+|+.+++++. + |+|+ +++++++++++
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~-- 180 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGG-LGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVV-- 180 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHH-TTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGG--
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHh-CCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHH--
Confidence 46999999999987 4799999998875 6889999 999999999998753 2 7777 55666665554
Q ss_pred CceEEEcCch-hhHHhccccccccCccEEEEeCCCCCH-HHHHhhcCCCceEEechhhHhhhc
Q 027798 157 LRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTP-KERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 157 ~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~-~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+. +|+.+| +++|+.++++.+|.... +.+....++ +.+.++.||.+.|
T Consensus 181 --~~~vGD~~~~Di~~a----~~aG~~~i~~~~~~~~~~~~~~~~~ad--~v~~~l~el~~~l 235 (263)
T 3k1z_A 181 --AAHVGDNYLCDYQGP----RAVGMHSFLVVGPQALDPVVRDSVPKE--HILPSLAHLLPAL 235 (263)
T ss_dssp --EEEEESCHHHHTHHH----HTTTCEEEEECCSSCCCHHHHHHSCGG--GEESSGGGHHHHH
T ss_pred --EEEECCCcHHHHHHH----HHCCCEEEEEcCCCCCchhhcccCCCc--eEeCCHHHHHHHH
Confidence 99999997 999999 99999999999997643 344455666 5566999988765
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.71 E-value=7.3e-16 Score=124.98 Aligned_cols=124 Identities=18% Similarity=0.225 Sum_probs=100.5
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCC-CCCCc
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPE-HQGLR 158 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~-~~~~e 158 (218)
....++||+.++|+.|+ .+++|+||++...+...++. +|+..+|+.+++++.. |||+++..+....+ .+|++
T Consensus 100 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 178 (238)
T 3ed5_A 100 EGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRD-SGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEH 178 (238)
T ss_dssp TCCCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGG
T ss_pred hcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHH-cChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhH
Confidence 34689999999999874 58999999999999999999 9999999999987643 77876665555555 56666
Q ss_pred eEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
|+||||+. +|+.+| +++|+.++++.+|..... .... +.+.+.++.||.+.|+
T Consensus 179 ~i~vGD~~~~Di~~a----~~aG~~~i~~~~~~~~~~--~~~~--ad~v~~~~~el~~~l~ 231 (238)
T 3ed5_A 179 TLIIGDSLTADIKGG----QLAGLDTCWMNPDMKPNV--PEII--PTYEIRKLEELYHILN 231 (238)
T ss_dssp EEEEESCTTTTHHHH----HHTTCEEEEECTTCCCCT--TCCC--CSEEESSGGGHHHHHT
T ss_pred eEEECCCcHHHHHHH----HHCCCEEEEECCCCCCCc--ccCC--CCeEECCHHHHHHHHH
Confidence 99999998 999999 999999999999854332 2234 4477779999988763
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-16 Score=127.21 Aligned_cols=120 Identities=18% Similarity=0.175 Sum_probs=98.3
Q ss_pred hhcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcCCC
Q 027798 85 IGANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~~~ 154 (218)
.....++||+.++|+.|+ .+++|+||++...+...++. +|+..+|+.+++++. + |+|+ ++++++++++
T Consensus 96 ~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~- 173 (234)
T 3u26_A 96 QRYGELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGE- 173 (234)
T ss_dssp HHHCCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGG-
T ss_pred HhhCCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHH-cCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCch-
Confidence 346789999999999886 58999999999999999999 999999999998753 2 7776 5555665554
Q ss_pred CCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+|+||||+. +|+.+| +++|+.+++|.+|....+.+. .++ +.+.++.||.+.|
T Consensus 174 ---~~~~vGD~~~~Di~~a----~~aG~~~~~v~~~~~~~~~~~--~a~--~~~~~~~el~~~l 226 (234)
T 3u26_A 174 ---EAVYVGDNPVKDCGGS----KNLGMTSILLDRKGEKREFWD--KCD--FIVSDLREVIKIV 226 (234)
T ss_dssp ---GEEEEESCTTTTHHHH----HTTTCEEEEECSSSTTGGGGG--GCS--EEESSTHHHHHHH
T ss_pred ---hEEEEcCCcHHHHHHH----HHcCCEEEEECCCCCcccccc--CCC--EeeCCHHHHHHHH
Confidence 499999998 999999 999999999999966544332 455 6677999998765
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-16 Score=128.66 Aligned_cols=119 Identities=19% Similarity=0.250 Sum_probs=96.3
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...++||+.++|+.| +.+++|+||++...+...++. +|+..+|+.+++++.. |+|+ +++++++++++
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~- 180 (240)
T 2no4_A 103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNE- 180 (240)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGG-
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHh-cCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCccc-
Confidence 467999999999887 479999999999999999999 9999999999987643 7777 55566655554
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+.+|+.+| +++|+.+++|.+|+. .+.+ ...+ ..+.+.++.||.+.|
T Consensus 181 ---~~~iGD~~~Di~~a----~~aG~~~~~v~~~~~-~~~~-~~~~-~~~~~~~~~el~~~l 232 (240)
T 2no4_A 181 ---VCFVSSNAWDLGGA----GKFGFNTVRINRQGN-PPEY-EFAP-LKHQVNSLSELWPLL 232 (240)
T ss_dssp ---EEEEESCHHHHHHH----HHHTCEEEEECTTCC-CCCC-TTSC-CSEEESSGGGHHHHH
T ss_pred ---EEEEeCCHHHHHHH----HHCCCEEEEECCCCC-CCcc-cCCC-CceeeCCHHHHHHHH
Confidence 99999999999999 999999999999876 2222 2233 046677999998765
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5e-17 Score=130.46 Aligned_cols=122 Identities=18% Similarity=0.142 Sum_probs=98.1
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC--CeeEeCCCC---ChHHHHHHhhhcCCCCC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTG---PKVNVLKQLQKKPEHQG 156 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f--d~i~~~~~~---pKPe~l~~l~~~~~~~~ 156 (218)
.....++||+.++|+.| +.+++|+||++...++..++. +|+..+| +.+++.+.. |||+++..+....+.+|
T Consensus 66 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~ 144 (205)
T 3m9l_A 66 AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEA-IGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSP 144 (205)
T ss_dssp EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCG
T ss_pred hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHH-cCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCH
Confidence 45568999999999987 479999999999999999999 9999999 889988755 66764444443344455
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++|+||||+.+|+++| +++|+.+|++.+|..... ..++ +.+.++.||.+.+
T Consensus 145 ~~~i~iGD~~~Di~~a----~~aG~~~i~v~~~~~~~~----~~ad--~v~~~~~el~~~~ 195 (205)
T 3m9l_A 145 SRMVMVGDYRFDLDCG----RAAGTRTVLVNLPDNPWP----ELTD--WHARDCAQLRDLL 195 (205)
T ss_dssp GGEEEEESSHHHHHHH----HHHTCEEEECSSSSCSCG----GGCS--EECSSHHHHHHHH
T ss_pred HHEEEECCCHHHHHHH----HHcCCEEEEEeCCCCccc----ccCC--EEeCCHHHHHHHH
Confidence 5599999999999999 999999999999875322 2344 6677999998765
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-16 Score=127.84 Aligned_cols=125 Identities=17% Similarity=0.136 Sum_probs=96.1
Q ss_pred hhcCCCcccHHHHHHhc---C-CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceE
Q 027798 85 IGANRLYPGVSDALKLA---S-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~-~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l 160 (218)
.....++||+.++|+.| + .+++|+||++...+...++. +|+..+|+.++++.. |||++++.+....+.+|++|+
T Consensus 101 ~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~k-pk~~~~~~~~~~lgi~~~~~i 178 (234)
T 3ddh_A 101 KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLER-SGLSPYFDHIEVMSD-KTEKEYLRLLSILQIAPSELL 178 (234)
T ss_dssp TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHH-HTCGGGCSEEEEESC-CSHHHHHHHHHHHTCCGGGEE
T ss_pred hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHH-hCcHhhhheeeecCC-CCHHHHHHHHHHhCCCcceEE
Confidence 34568999999999887 5 79999999999999999999 999999999998654 899844333333333445599
Q ss_pred EEcCch-hhHHhccccccccCccEEEE----eCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 161 FVEDRL-ATLKNVIKEPELDGWNLYLV----DWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 161 ~IGDs~-~Di~aA~~~~~~aGi~~i~v----~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
||||+. +|+.+| +++|+.+++| .||+...+. ...+ +.+.+.++.||.+.|.
T Consensus 179 ~iGD~~~~Di~~a----~~aG~~~v~v~~~~~~g~~~~~~-~~~~--~d~v~~~l~el~~~l~ 234 (234)
T 3ddh_A 179 MVGNSFKSDIQPV----LSLGGYGVHIPFEVMWKHEVTET-FAHE--RLKQVKRLDDLLSLLG 234 (234)
T ss_dssp EEESCCCCCCHHH----HHHTCEEEECCCCTTCCCC---C-CCCT--TEEECSSGGGHHHHCC
T ss_pred EECCCcHHHhHHH----HHCCCeEEEecCCcccccCCccc-ccCC--CceecccHHHHHHhcC
Confidence 999997 999999 9999999999 566554432 2222 2577779999998763
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-16 Score=131.55 Aligned_cols=123 Identities=15% Similarity=0.071 Sum_probs=97.7
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC-CeeEeCCCC----ChHH----HHHHhhhcC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLGTG----PKVN----VLKQLQKKP 152 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f-d~i~~~~~~----pKPe----~l~~l~~~~ 152 (218)
.....++||+.++|+.+ +.+++|+||++...+...++. +|+..+| +.+++++.. |||+ +++++++++
T Consensus 99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~ 177 (267)
T 1swv_A 99 PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYP 177 (267)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCS
T ss_pred ccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCC
Confidence 34567999999999887 469999999999999999999 8988886 888887642 7777 555556544
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCC-----------------------HHHHHhhcCCCceEEec
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQ 209 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~-----------------------~~~l~~~~~~~~i~~~~ 209 (218)
+++|++|||+.+|+.+| +++|+.+++|.+|++. .+++...+++ +.+.+
T Consensus 178 ---~~~~i~iGD~~nDi~~a----~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~v~~~ 248 (267)
T 1swv_A 178 ---MNHMIKVGDTVSDMKEG----RNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH--FTIET 248 (267)
T ss_dssp ---GGGEEEEESSHHHHHHH----HHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS--EEESS
T ss_pred ---CcCEEEEeCCHHHHHHH----HHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCc--eeccC
Confidence 04599999999999999 9999999999999873 3445455566 55669
Q ss_pred hhhHhhhc
Q 027798 210 LSDFCTKL 217 (218)
Q Consensus 210 l~el~~~~ 217 (218)
+.||.+.|
T Consensus 249 ~~el~~~l 256 (267)
T 1swv_A 249 MQELESVM 256 (267)
T ss_dssp GGGHHHHH
T ss_pred HHHHHHHH
Confidence 99887664
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-16 Score=129.52 Aligned_cols=124 Identities=15% Similarity=0.099 Sum_probs=97.2
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC--CC----ChHHHHHHhhhcCCCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--TG----PKVNVLKQLQKKPEHQG 156 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~--~~----pKPe~l~~l~~~~~~~~ 156 (218)
....++||+.++|+.| +.+++|+||++...+...+...+|+..+|+.+++++ .. |+|+++..+....+.+|
T Consensus 109 ~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 188 (250)
T 3l5k_A 109 PTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPP 188 (250)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCC
T ss_pred ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCC
Confidence 4578999999999987 479999999998888777744158899999999887 43 66775555544444454
Q ss_pred --CceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 157 --LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 157 --~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++|+||||+.+|+++| +++|+.+++|.+|...++ ....+.+.+.++.||.+.|
T Consensus 189 ~~~~~i~iGD~~~Di~~a----~~aG~~~i~v~~~~~~~~----~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 189 AMEKCLVFEDAPNGVEAA----LAAGMQVVMVPDGNLSRD----LTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp CGGGEEEEESSHHHHHHH----HHTTCEEEECCCTTSCGG----GSTTSSEECSCGGGCCGGG
T ss_pred CcceEEEEeCCHHHHHHH----HHcCCEEEEEcCCCCchh----hcccccEeecCHHHhhHHH
Confidence 7799999999999999 999999999999987654 2333446777999986654
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.9e-16 Score=128.82 Aligned_cols=119 Identities=14% Similarity=0.192 Sum_probs=96.9
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...++||+.++|+.| +.+++|+||++...+...+++ +|+..+|+.+++++.. |+|+ +++++++++++
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~- 170 (232)
T 1zrn_A 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA- 170 (232)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG-
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-cChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCccc-
Confidence 467999999999887 469999999999999999999 9999999999988642 7777 55556655544
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+.+|+.+| +++|+.++++.+|.+..+.+ ...+.+.+.++.||.+.|
T Consensus 171 ---~~~iGD~~~Di~~a----~~aG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~el~~~l 222 (232)
T 1zrn_A 171 ---ILFVASNAWDATGA----RYFGFPTCWINRTGNVFEEM---GQTPDWEVTSLRAVVELF 222 (232)
T ss_dssp ---EEEEESCHHHHHHH----HHHTCCEEEECTTCCCCCSS---SCCCSEEESSHHHHHTTC
T ss_pred ---EEEEeCCHHHHHHH----HHcCCEEEEEcCCCCCcccc---CCCCCEEECCHHHHHHHH
Confidence 99999999999999 99999999999987653322 233446677999998765
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=134.08 Aligned_cols=123 Identities=11% Similarity=0.005 Sum_probs=95.0
Q ss_pred hcCCCcccHHHHHHhc---CC--CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-----C---ChHH----HHHHh
Q 027798 86 GANRLYPGVSDALKLA---SS--RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----G---PKVN----VLKQL 148 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~--~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-----~---pKPe----~l~~l 148 (218)
....++||+.++|+.| +. +++|+||++...+...++. +|+..+|+.+++++. . |||+ +++++
T Consensus 139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~l 217 (282)
T 3nuq_A 139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL-LGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKES 217 (282)
T ss_dssp GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHH-HTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHH
T ss_pred hccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHh-CCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHc
Confidence 4467999999999987 57 9999999999999999999 999999999987642 2 6777 55555
Q ss_pred hhcCCCCCCceEEEcCchhhHHhccccccccCc-cEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW-NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi-~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
++.+ +++|+||||+.+|+.+| +++|+ .++++..+..... + ...+.+.+.+.++.||.+.|+
T Consensus 218 gi~~---~~~~i~vGD~~~Di~~a----~~aG~~~~~~~~~~~~~~~-~-~~~~~ad~vi~sl~el~~~l~ 279 (282)
T 3nuq_A 218 GLAR---YENAYFIDDSGKNIETG----IKLGMKTCIHLVENEVNEI-L-GQTPEGAIVISDILELPHVVS 279 (282)
T ss_dssp TCCC---GGGEEEEESCHHHHHHH----HHHTCSEEEEECSCCC------CCCCTTCEEESSGGGGGGTSG
T ss_pred CCCC---cccEEEEcCCHHHHHHH----HHCCCeEEEEEcCCccccc-c-ccCCCCCEEeCCHHHHHHHhh
Confidence 5544 04599999999999999 99999 7788887764321 1 223344477779999988763
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.4e-17 Score=128.17 Aligned_cols=116 Identities=17% Similarity=0.111 Sum_probs=94.9
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~ 156 (218)
..++||+.++|+.+ +.+++|+||++...++..+++ +|+..+|+.+++++.. |||+ ++++++.++
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~---- 162 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEE-NRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQA---- 162 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCG----
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHH-cCcHhheeeEeecccccCCCCChHHHHHHHHHcCCCh----
Confidence 36899999999987 469999999999999999999 9999999999998643 6666 555566554
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++|+||||+.+|+.+| +++|+.++++.+|...... ..+ .+.+.++.||.++|
T Consensus 163 ~~~~~iGD~~~Di~~a----~~aG~~~~~~~~~~~~~~~---~~a--~~~~~~~~el~~~i 214 (214)
T 3e58_A 163 SRALIIEDSEKGIAAG----VAADVEVWAIRDNEFGMDQ---SAA--KGLLDSLTDVLDLI 214 (214)
T ss_dssp GGEEEEECSHHHHHHH----HHTTCEEEEECCSSSCCCC---TTS--SEEESSGGGGGGGC
T ss_pred HHeEEEeccHhhHHHH----HHCCCEEEEECCCCccchh---ccH--HHHHHHHHHHHhhC
Confidence 4599999999999999 9999999999887443321 344 47777999998765
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.3e-16 Score=130.53 Aligned_cols=123 Identities=11% Similarity=0.137 Sum_probs=98.6
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHHHHHHhhhcCCCCCCce
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe~l~~l~~~~~~~~~e~ 159 (218)
....++||+.++|+.|+ .+++|+||++...+...++. +|+. |+.+++++. . |||+++..+....+.+|++|
T Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 189 (254)
T 3umg_A 113 HVLTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKN-AGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEV 189 (254)
T ss_dssp GSCCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHH-HTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGE
T ss_pred hhCcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHh-CCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 45689999999999885 69999999999999999999 9986 999888753 2 78875544444444455569
Q ss_pred EEEcCchhhHHhccccccccCccEEEEe----CCCCCHHHH-HhhcCCCceEEechhhHhhhc
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLVD----WGYNTPKER-AEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v~----~G~~~~~~l-~~~~~~~~i~~~~l~el~~~~ 217 (218)
+||||+.+|+.+| +++|+.++++. ||+...+++ ....++ +.+.++.||.+.|
T Consensus 190 ~~iGD~~~Di~~a----~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d--~~~~~~~el~~~l 246 (254)
T 3umg_A 190 MLAAAHNGDLEAA----HATGLATAFILRPVEHGPHQTDDLAPTGSWD--ISATDITDLAAQL 246 (254)
T ss_dssp EEEESCHHHHHHH----HHTTCEEEEECCTTTTCTTCCSCSSCSSCCS--EEESSHHHHHHHH
T ss_pred EEEeCChHhHHHH----HHCCCEEEEEecCCcCCCCccccccccCCCc--eEECCHHHHHHHh
Confidence 9999999999999 99999999999 888766554 334444 7777999998765
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-16 Score=128.28 Aligned_cols=120 Identities=9% Similarity=0.135 Sum_probs=92.7
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCc---hHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHHHHHHhhhcCCCCCCc
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGT-G---PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~---~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe~l~~l~~~~~~~~~e 158 (218)
.++||+.++|+.| +.+++|+||+. ...+...++. +|+..+|+.+++++. + |+|+++..+....+.+|++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 177 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLER-FGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEE 177 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHh-CCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 4699999999987 46899999999 9999999999 999999999998753 2 7777444433333344555
Q ss_pred eEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|++|||+. +|+++| +++|+.++++.||. ...++. .. +.+.+.++.|+.+.|
T Consensus 178 ~~~iGD~~~nDi~~a----~~aG~~~~~~~~~~-~~~~~~-~~--~~~~~~~~~el~~~l 229 (235)
T 2om6_A 178 SLHIGDTYAEDYQGA----RKVGMWAVWINQEG-DKVRKL-EE--RGFEIPSIANLKDVI 229 (235)
T ss_dssp EEEEESCTTTTHHHH----HHTTSEEEEECTTC-CSCEEE-ET--TEEEESSGGGHHHHH
T ss_pred eEEECCChHHHHHHH----HHCCCEEEEECCCC-CCcccC-CC--CcchHhhHHHHHHHH
Confidence 99999999 999999 99999999999983 333221 12 336677999887765
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.6e-16 Score=126.29 Aligned_cols=121 Identities=17% Similarity=0.221 Sum_probs=98.0
Q ss_pred hcCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCC-CeeEeCCC------CChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLGT------GPKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~f-d~i~~~~~------~pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.++.+++|+||++...+...+++ +|+..+| +.+++++. .|||+ ++++++.++
T Consensus 84 ~~~~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~-- 160 (229)
T 2fdr_A 84 RDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP-- 160 (229)
T ss_dssp HHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCG--
T ss_pred cCCccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHh-CChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCCh--
Confidence 3467899999999999889999999999999999999 9999999 98888653 25555 555555554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCC----HHHHHhhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT----PKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~----~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++|++|||+.+|+.+| +++|+.++++.++... .+++...+++ +.+.++.|+.+.|
T Consensus 161 --~~~i~iGD~~~Di~~a----~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad--~v~~~~~el~~~l 219 (229)
T 2fdr_A 161 --DRVVVVEDSVHGIHGA----RAAGMRVIGFTGASHTYPSHADRLTDAGAE--TVISRMQDLPAVI 219 (229)
T ss_dssp --GGEEEEESSHHHHHHH----HHTTCEEEEECCSTTCCTTHHHHHHHHTCS--EEESCGGGHHHHH
T ss_pred --hHeEEEcCCHHHHHHH----HHCCCEEEEEecCCccchhhhHHHhhcCCc--eeecCHHHHHHHH
Confidence 4599999999999999 9999999999998763 3345555566 5556888887654
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-16 Score=133.52 Aligned_cols=108 Identities=16% Similarity=0.163 Sum_probs=83.8
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...++||+.++|+.| +.+++++|++. .+...|++ +|+..+||.|++++.. |+|+ ++++++++|++
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~-~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e- 189 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNH-LGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQN- 189 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHH-HTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGG-
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhh-cccccccceeecccccCCCCCcHHHHHHHHHHhCCChHH-
Confidence 346899999999987 35777766654 35678999 9999999999998754 5555 77777776666
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
|+||||+.+|+++| ++|||++|+|... +.+ .+++ +.+.++.||
T Consensus 190 ---~l~VGDs~~Di~aA----~~aG~~~i~v~~~----~~~--~~ad--~vi~~l~eL 232 (250)
T 4gib_A 190 ---CIGIEDASAGIDAI----NSANMFSVGVGNY----ENL--KKAN--LVVDSTNQL 232 (250)
T ss_dssp ---EEEEESSHHHHHHH----HHTTCEEEEESCT----TTT--TTSS--EEESSGGGC
T ss_pred ---eEEECCCHHHHHHH----HHcCCEEEEECCh----hHh--ccCC--EEECChHhC
Confidence 99999999999999 9999999999532 222 2345 666688887
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.67 E-value=6.3e-17 Score=132.88 Aligned_cols=122 Identities=18% Similarity=0.185 Sum_probs=95.6
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEc
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
....++||+.++|+.|+ .+++|+||+++..+...|++ +|+..+|+.+++... +||..++.+.. ..+|++|+|||
T Consensus 93 ~~~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~-~gl~~~f~~~~~~~~-~K~~~~~~~~~--~~~~~~~~~vg 168 (231)
T 2p11_A 93 FASRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIAR-SGLWDEVEGRVLIYI-HKELMLDQVME--CYPARHYVMVD 168 (231)
T ss_dssp GGGGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHH-TTHHHHTTTCEEEES-SGGGCHHHHHH--HSCCSEEEEEC
T ss_pred HhCCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHH-cCcHHhcCeeEEecC-ChHHHHHHHHh--cCCCceEEEEc
Confidence 34579999999999883 28999999999999999999 999999988765322 77874444332 23556699999
Q ss_pred Cchh---hHHhccccccccCccEEEEeCCCC--CHHHHHhh-cCCCceEEechhhHhhhc
Q 027798 164 DRLA---TLKNVIKEPELDGWNLYLVDWGYN--TPKERAEA-ASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 164 Ds~~---Di~aA~~~~~~aGi~~i~v~~G~~--~~~~l~~~-~~~~~i~~~~l~el~~~~ 217 (218)
|+.+ |+++| +++||++++|.||+. ..+.+... .++ +.+.++.||.+.|
T Consensus 169 Ds~~d~~di~~A----~~aG~~~i~v~~g~~~~~~~~l~~~~~~~--~~i~~~~el~~~l 222 (231)
T 2p11_A 169 DKLRILAAMKKA----WGARLTTVFPRQGHYAFDPKEISSHPPAD--VTVERIGDLVEMD 222 (231)
T ss_dssp SCHHHHHHHHHH----HGGGEEEEEECCSSSSSCHHHHHHSCCCS--EEESSGGGGGGCG
T ss_pred CccchhhhhHHH----HHcCCeEEEeCCCCCCCcchhccccCCCc--eeecCHHHHHHHH
Confidence 9998 99999 999999999999964 45556555 366 5666999987765
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.66 E-value=5.3e-16 Score=124.43 Aligned_cols=123 Identities=17% Similarity=0.157 Sum_probs=95.3
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCc
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e 158 (218)
....++||+.++|+.+ +.+++|+||++...++..++. +|+..+|+.+++++.. |+|++++.+....+.++++
T Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~ 169 (226)
T 1te2_A 91 ETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLT 169 (226)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGG
T ss_pred ccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHh-cCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHH
Confidence 3467899999999877 468999999999999999999 9999999999987643 5566443333333334455
Q ss_pred eEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 159 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
|++|||+.+|+.+| +++|+.++++.||++..+.. ...++ +.+.++.||.+.
T Consensus 170 ~i~iGD~~nDi~~a----~~aG~~~~~~~~~~~~~~~~-~~~a~--~v~~~~~el~~~ 220 (226)
T 1te2_A 170 CVALEDSVNGMIAS----KAARMRSIVVPAPEAQNDPR-FVLAN--VKLSSLTELTAK 220 (226)
T ss_dssp EEEEESSHHHHHHH----HHTTCEEEECCCTTTTTCGG-GGGSS--EECSCGGGCCHH
T ss_pred eEEEeCCHHHHHHH----HHcCCEEEEEcCCCCccccc-ccccC--eEECCHHHHhHH
Confidence 99999999999999 99999999999997654432 23455 666688887653
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-16 Score=127.68 Aligned_cols=118 Identities=21% Similarity=0.225 Sum_probs=91.6
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCc---------------hHHHHHHHHHhcCCCCCCCeeEeC-----------
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQ---------------SRFVETLLRELAGVTITPDRLYGL----------- 136 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~---------------~~~~~~~L~~~~gl~~~fd~i~~~----------- 136 (218)
....++||+.++|+.| +++++|+||++ ...+...|+. +|+. |+.++.+
T Consensus 47 ~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--f~~~~~~~~~~~~~~~~~ 123 (211)
T 2gmw_A 47 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVD--LDGIYYCPHHPQGSVEEF 123 (211)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCBTTCSSGGG
T ss_pred ccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH-cCCc--eEEEEECCcCCCCccccc
Confidence 3468999999999988 57999999999 4788899999 9987 7776532
Q ss_pred -C-CC---ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE-EEEeCCCCCHHHHHhhcCCCceE
Q 027798 137 -G-TG---PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQ 206 (218)
Q Consensus 137 -~-~~---pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~-i~v~~G~~~~~~l~~~~~~~~i~ 206 (218)
+ .. |+|+ +++++++++++ |+||||+.+|+.+| +++|+.+ ++|.||+...+. ....|+ +.
T Consensus 124 ~~~~~~~KP~p~~~~~~~~~lgi~~~~----~~~VGD~~~Di~~a----~~aG~~~~i~v~~g~~~~~~-~~~~~d--~v 192 (211)
T 2gmw_A 124 RQVCDCRKPHPGMLLSARDYLHIDMAA----SYMVGDKLEDMQAA----VAANVGTKVLVRTGKPITPE-AENAAD--WV 192 (211)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBCGGG----CEEEESSHHHHHHH----HHTTCSEEEEESSSSCCCHH-HHHHCS--EE
T ss_pred CccCcCCCCCHHHHHHHHHHcCCCHHH----EEEEcCCHHHHHHH----HHCCCceEEEEecCCCcccc-ccCCCC--EE
Confidence 1 22 5566 55566665554 99999999999999 9999999 999999875433 334566 55
Q ss_pred EechhhHhhhc
Q 027798 207 LLQLSDFCTKL 217 (218)
Q Consensus 207 ~~~l~el~~~~ 217 (218)
+.++.||.+.+
T Consensus 193 i~~l~el~~~l 203 (211)
T 2gmw_A 193 LNSLADLPQAI 203 (211)
T ss_dssp ESCGGGHHHHH
T ss_pred eCCHHHHHHHH
Confidence 66999987765
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=127.62 Aligned_cols=119 Identities=12% Similarity=0.131 Sum_probs=93.1
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceEE
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l~ 161 (218)
..++||+.+ |+.|+ .+++|+||++...++..+++ +|+..+|+.+++++.. |+|+++..+....+ |++|+|
T Consensus 73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~ 148 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLER-NGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFL 148 (201)
T ss_dssp CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEE
T ss_pred cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHH-CCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEE
Confidence 578999999 88774 69999999999999999999 9999999999987642 66774333322222 445999
Q ss_pred EcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 162 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 162 IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|||+.+|+.+| +++|+.++++.||++..+.+ ...+ .+.+.++.||.+.|
T Consensus 149 vGD~~~Di~~a----~~aG~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~el~~~l 197 (201)
T 2w43_A 149 VSSNAFDVIGA----KNAGMRSIFVNRKNTIVDPI-GGKP--DVIVNDFKELYEWI 197 (201)
T ss_dssp EESCHHHHHHH----HHTTCEEEEECSSSCCCCTT-SCCC--SEEESSHHHHHHHH
T ss_pred EeCCHHHhHHH----HHCCCEEEEECCCCCCcccc-CCCC--CEEECCHHHHHHHH
Confidence 99999999999 99999999999987653322 2234 46677999987765
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.7e-16 Score=130.39 Aligned_cols=119 Identities=16% Similarity=0.186 Sum_probs=97.1
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC---C-ChHH----HHHHhhhcCCCC
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---G-PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~---~-pKPe----~l~~l~~~~~~~ 155 (218)
....++||+.++|+.|+ .+++|+||++...+...++. +|+. |+.+++++. . |||+ +++++++++
T Consensus 117 ~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~-~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~--- 190 (254)
T 3umc_A 117 HRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARH-AGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPP--- 190 (254)
T ss_dssp GSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHH-HTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCG---
T ss_pred hcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHH-cCCC--cceEEeecccccCCCCHHHHHHHHHHcCCCh---
Confidence 45678999999999885 58999999999999999999 9986 999988753 2 8887 555555544
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEe----CCCCCHHHH-HhhcCCCceEEechhhHhhhc
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVD----WGYNTPKER-AEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~----~G~~~~~~l-~~~~~~~~i~~~~l~el~~~~ 217 (218)
++|+||||+.+|+++| +++|+.++++. ||+...+++ ....|+ +.+.++.||.+.|
T Consensus 191 -~~~~~iGD~~~Di~~a----~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad--~v~~~l~el~~~l 250 (254)
T 3umc_A 191 -QEVMLCAAHNYDLKAA----RALGLKTAFIARPLEYGPGQSQDLAAEQDWD--LIASDLLDLHRQL 250 (254)
T ss_dssp -GGEEEEESCHHHHHHH----HHTTCEEEEECCTTTTCTTCCSSSSCSSCCS--EEESSHHHHHHHH
T ss_pred -HHEEEEcCchHhHHHH----HHCCCeEEEEecCCccCCCCCcccccCCCCc--EEECCHHHHHHHh
Confidence 4599999999999999 99999999999 888766655 233444 7777999998765
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-15 Score=122.78 Aligned_cols=107 Identities=20% Similarity=0.197 Sum_probs=78.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--ChH--H----HHHHhhhcCCCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKV--N----VLKQLQKKPEHQGL 157 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKP--e----~l~~l~~~~~~~~~ 157 (218)
.++||+.++|+.| +.+++|+||++. +...++. +|+..+|+.+++++.. .|| + +++++++++++
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~--- 165 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRR-LAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPAD--- 165 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-TTCTTTCSEECCC---------CCHHHHHHHHHTSCGGG---
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHH-cCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHH---
Confidence 3899999999987 479999999876 7888999 9999999999988654 454 4 66666665555
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
|+||||+.+|+.+| +++|+.++++.++ +.+. .++ +.+.++.|+.
T Consensus 166 -~i~vGDs~~Di~~a----~~aG~~~~~~~~~----~~~~--~ad--~v~~s~~el~ 209 (233)
T 3nas_A 166 -CAAIEDAEAGISAI----KSAGMFAVGVGQG----QPML--GAD--LVVRQTSDLT 209 (233)
T ss_dssp -EEEEECSHHHHHHH----HHTTCEEEECC-------------CS--EECSSGGGCC
T ss_pred -EEEEeCCHHHHHHH----HHcCCEEEEECCc----cccc--cCC--EEeCChHhCC
Confidence 99999999999999 9999999998643 3332 455 5556777763
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.3e-16 Score=128.16 Aligned_cols=120 Identities=13% Similarity=0.151 Sum_probs=93.0
Q ss_pred hcCCCcccHHHHHHhc--CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHhhhcCCCCCCce
Q 027798 86 GANRLYPGVSDALKLA--SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L--~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~~~~~~~e~ 159 (218)
....++||+.++|+.| +.+++|+||++...+...++. +|+..+|+.++++.. |+|+ ++++++++++ +|
T Consensus 109 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~~k-p~~~~~~~~~~~l~~~~~----~~ 182 (251)
T 2pke_A 109 HPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQ-SGLSDLFPRIEVVSE-KDPQTYARVLSEFDLPAE----RF 182 (251)
T ss_dssp CCCCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHH-HSGGGTCCCEEEESC-CSHHHHHHHHHHHTCCGG----GE
T ss_pred ccCCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCcHHhCceeeeeCC-CCHHHHHHHHHHhCcCch----hE
Confidence 4567999999999987 568999999999999999999 999999999988643 8887 5555665554 49
Q ss_pred EEEcCch-hhHHhccccccccCccEEEEeCCCCCHH---H-HHhhcCCCce-EEechhhHhhhc
Q 027798 160 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPK---E-RAEAASMPRI-QLLQLSDFCTKL 217 (218)
Q Consensus 160 l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~---~-l~~~~~~~~i-~~~~l~el~~~~ 217 (218)
+||||+. +|+.+| +++|+.+++|.||+.... + +....|+ + .+.++.||.+.|
T Consensus 183 i~iGD~~~~Di~~a----~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~i~~~~el~~~l 240 (251)
T 2pke_A 183 VMIGNSLRSDVEPV----LAIGGWGIYTPYAVTWAHEQDHGVAADEPR--LREVPDPSGWPAAV 240 (251)
T ss_dssp EEEESCCCCCCHHH----HHTTCEEEECCCC-------------CCTT--EEECSSGGGHHHHH
T ss_pred EEECCCchhhHHHH----HHCCCEEEEECCCCccccccccccccCCCC--eeeeCCHHHHHHHH
Confidence 9999999 999999 999999999999875321 1 3233444 5 667999887765
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.64 E-value=8.2e-16 Score=124.94 Aligned_cols=115 Identities=14% Similarity=0.205 Sum_probs=91.5
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.| +.+++|+||++...++..++. +|+..+|+.+++++.. |||+ ++++++++++.
T Consensus 100 ~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 178 (231)
T 3kzx_A 100 DNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHH-KNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSK 178 (231)
T ss_dssp CCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCST
T ss_pred ccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHH-CCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCccc
Confidence 4567999999999987 479999999999999999999 9999999999987643 6666 55666655540
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+|+||||+.+|+++| +++|+.++++..+.. ..++ +.+.++.||.+.|
T Consensus 179 ---~~v~vGD~~~Di~~a----~~aG~~~v~~~~~~~-------~~~~--~~~~~~~el~~~l 225 (231)
T 3kzx_A 179 ---EVFFIGDSISDIQSA----IEAGCLPIKYGSTNI-------IKDI--LSFKNFYDIRNFI 225 (231)
T ss_dssp ---TEEEEESSHHHHHHH----HHTTCEEEEECC------------CC--EEESSHHHHHHHH
T ss_pred ---CEEEEcCCHHHHHHH----HHCCCeEEEECCCCC-------CCCc--eeeCCHHHHHHHH
Confidence 499999999999999 999999999854421 2333 6677999988765
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.64 E-value=4.4e-16 Score=129.13 Aligned_cols=122 Identities=19% Similarity=0.249 Sum_probs=95.2
Q ss_pred cCCCcccHHHHHHhc-CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCCC
Q 027798 87 ANRLYPGVSDALKLA-SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQGL 157 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L-~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~~ 157 (218)
...++||+.++|+.| +.+++|+||++...+...+++ +|+..+|+.+++++.. |+|+ +++++++++ +
T Consensus 91 ~~~~~~~~~~~l~~l~g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~----~ 165 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTP----A 165 (253)
T ss_dssp SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCG----G
T ss_pred cCCCCccHHHHHHHHcCCCEEEEeCcCHHHHHHHHHH-CCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCH----H
Confidence 467999999999988 679999999999999999999 9999999999988642 7777 555555544 4
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeC------------CCCCHHH--------HHhhcCCCceEEechhhHhhhc
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDW------------GYNTPKE--------RAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~------------G~~~~~~--------l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+|+||||+.+|+.+| +++|+.++++.+ ||-++.. .......+.+.+.++.||.+++
T Consensus 166 ~~~~vGD~~~Di~~a----~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 166 EVLFVSSNGFDVGGA----KNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp GEEEEESCHHHHHHH----HHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred HEEEEeCChhhHHHH----HHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 599999999999999 999999999988 3321111 0111233446777999987765
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.64 E-value=5.2e-16 Score=131.04 Aligned_cols=113 Identities=17% Similarity=0.249 Sum_probs=86.2
Q ss_pred cCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhc--C---------CCCCCCeeEeCCC-C--ChHH----HHHHh
Q 027798 87 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA--G---------VTITPDRLYGLGT-G--PKVN----VLKQL 148 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~--g---------l~~~fd~i~~~~~-~--pKPe----~l~~l 148 (218)
...+|||+.++|+. +.+++|+||+++..++..+++ + | +..+|+.++.+.. + |+|+ +++++
T Consensus 123 ~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~-~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~l 200 (253)
T 2g80_A 123 KAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGY-VQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDI 200 (253)
T ss_dssp CBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHS-BCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHh-hcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHHc
Confidence 46799999999999 999999999999999999998 7 4 6666766665432 2 6777 67777
Q ss_pred hhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
+++|++ |+||||+..|+++| ++|||+++++.|+.... +....++ ..+.++.||
T Consensus 201 g~~p~~----~l~vgDs~~di~aA----~~aG~~~i~v~~~~~~~--~~~~~~~--~~i~~l~eL 253 (253)
T 2g80_A 201 GAKASE----VLFLSDNPLELDAA----AGVGIATGLASRPGNAP--VPDGQKY--QVYKNFETL 253 (253)
T ss_dssp TCCGGG----EEEEESCHHHHHHH----HTTTCEEEEECCTTSCC--CCSSCCS--CEESCSTTC
T ss_pred CCCccc----EEEEcCCHHHHHHH----HHcCCEEEEEcCCCCCC--cccccCC--CccCChhhC
Confidence 776666 99999999999999 99999999998842221 1111233 455577664
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.63 E-value=7.5e-16 Score=123.20 Aligned_cols=98 Identities=16% Similarity=0.086 Sum_probs=83.7
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCc-hHHHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHhhhcCCCCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQLQKKPEHQGL 157 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~-~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~~~~~~~ 157 (218)
....++||+.++|+.| |.+++|+||++ ...++..++. +|+..+|+.+++... +||+ +++++++++++
T Consensus 65 ~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~-~gl~~~f~~~~~~~~-~k~~~~~~~~~~~~~~~~~--- 139 (187)
T 2wm8_A 65 QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLEL-FDLFRYFVHREIYPG-SKITHFERLQQKTGIPFSQ--- 139 (187)
T ss_dssp CEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHH-TTCTTTEEEEEESSS-CHHHHHHHHHHHHCCCGGG---
T ss_pred cccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHH-cCcHhhcceeEEEeC-chHHHHHHHHHHcCCChHH---
Confidence 3457999999999988 57999999999 7999999999 999999999866543 7887 55556655554
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCH
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
|+||||+.+|+++| +++|+.+++|.||++..
T Consensus 140 -~~~igD~~~Di~~a----~~aG~~~i~v~~g~~~~ 170 (187)
T 2wm8_A 140 -MIFFDDERRNIVDV----SKLGVTCIHIQNGMNLQ 170 (187)
T ss_dssp -EEEEESCHHHHHHH----HTTTCEEEECSSSCCHH
T ss_pred -EEEEeCCccChHHH----HHcCCEEEEECCCCChH
Confidence 99999999999999 99999999999998743
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.1e-16 Score=128.40 Aligned_cols=117 Identities=24% Similarity=0.227 Sum_probs=88.6
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCCCCeeE-eC-----------
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLY-GL----------- 136 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~fd~i~-~~----------- 136 (218)
...++||+.++|+.| +++++|+||++. ..+...+++ +|+. |+.++ +.
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--~~~~~~~~~~~~g~~~~~~ 130 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGVF--VDMVLACAYHEAGVGPLAI 130 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCCTTCCSTTCC
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHH-cCCc--eeeEEEeecCCCCceeecc
Confidence 468999999999988 579999999998 788899999 9985 66644 42
Q ss_pred CC-C---ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE-EEEeCCCCCHHHHHhhcCCCceEE
Q 027798 137 GT-G---PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQL 207 (218)
Q Consensus 137 ~~-~---pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~-i~v~~G~~~~~~l~~~~~~~~i~~ 207 (218)
+. . |+|+ +++++++++ ++|+||||+.+|+.+| +++|+.+ ++|.||+...+. ....|+ +.+
T Consensus 131 ~~~~~~KP~~~~~~~~~~~~~i~~----~~~~~VGD~~~Di~~a----~~aG~~~~i~v~~g~~~~~~-~~~~~~--~~i 199 (218)
T 2o2x_A 131 PDHPMRKPNPGMLVEAGKRLALDL----QRSLIVGDKLADMQAG----KRAGLAQGWLVDGEAAVQPG-FAIRPL--RDS 199 (218)
T ss_dssp SSCTTSTTSCHHHHHHHHHHTCCG----GGCEEEESSHHHHHHH----HHTTCSEEEEETCCCEEETT-EEEEEE--SSH
T ss_pred cCCccCCCCHHHHHHHHHHcCCCH----HHEEEEeCCHHHHHHH----HHCCCCEeEEEecCCCCccc-ccCCCC--Eec
Confidence 22 2 5566 455555544 4599999999999999 9999999 999999875432 223455 344
Q ss_pred echhhHhhhc
Q 027798 208 LQLSDFCTKL 217 (218)
Q Consensus 208 ~~l~el~~~~ 217 (218)
.++.+|.+.+
T Consensus 200 ~~l~el~~~l 209 (218)
T 2o2x_A 200 SELGDLLAAI 209 (218)
T ss_dssp HHHHHHHHHH
T ss_pred ccHHHHHHHH
Confidence 5888877654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.61 E-value=3e-16 Score=125.05 Aligned_cols=105 Identities=19% Similarity=0.194 Sum_probs=87.3
Q ss_pred hcCCCcccHHHHHHhcCC--CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcCCCC
Q 027798 86 GANRLYPGVSDALKLASS--RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~~--~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~~~~ 155 (218)
....++||+.++|+.|+. +++|+||++...+...+++ +|+..+|+.+++++. + |+|+ ++++++.+++
T Consensus 83 ~~~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~-- 159 (200)
T 3cnh_A 83 EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRT-FGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPE-- 159 (200)
T ss_dssp HTCCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHH-HTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGG--
T ss_pred hcCccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHh-CCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHH--
Confidence 345699999999998832 8999999999999999999 999999999998753 2 7777 5555665554
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhh
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 199 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~ 199 (218)
+|+||||+.+|+.+| +++|+.++++.+|+...+++...
T Consensus 160 --~~~~vgD~~~Di~~a----~~aG~~~~~~~~~~~~~~~l~~~ 197 (200)
T 3cnh_A 160 --EAVMVDDRLQNVQAA----RAVGMHAVQCVDAAQLREELAAL 197 (200)
T ss_dssp --GEEEEESCHHHHHHH----HHTTCEEEECSCHHHHHHHHHHT
T ss_pred --HeEEeCCCHHHHHHH----HHCCCEEEEECCchhhHHHHHHh
Confidence 499999999999999 99999999999987766666543
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.60 E-value=9.5e-17 Score=120.51 Aligned_cols=103 Identities=13% Similarity=0.054 Sum_probs=81.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHHHHHHhhhcCCCCCCceEE
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVNVLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe~l~~l~~~~~~~~~e~l~ 161 (218)
.++||+.++|+.| +.+++|+||++...++..++. +|+..+|+.+++++. . |+|+++..+..+...+|++|+|
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 96 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRE-LETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVL 96 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHH-HHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-CChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 5789999999887 579999999999999999999 999999999998742 2 6676443333333334455999
Q ss_pred EcCchhhHHhccccccccCccEEEEeCCCCCHHHH
Q 027798 162 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 162 IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
|||+..|+++| +++|+.++++.+|....+.+
T Consensus 97 vgD~~~di~~a----~~~G~~~i~~~~~~~~~~~l 127 (137)
T 2pr7_A 97 VDDSILNVRGA----VEAGLVGVYYQQFDRAVVEI 127 (137)
T ss_dssp EESCHHHHHHH----HHHTCEEEECSCHHHHHHHH
T ss_pred EcCCHHHHHHH----HHCCCEEEEeCChHHHHHHH
Confidence 99999999999 99999999998875444433
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.59 E-value=3e-15 Score=117.98 Aligned_cols=113 Identities=17% Similarity=0.231 Sum_probs=92.4
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.+ +.+++|+||+...... .++. +|+..+|+.+++++.. |+|+ ++++++.+++
T Consensus 82 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~- 158 (207)
T 2go7_A 82 AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSD- 158 (207)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG-
T ss_pred ccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHH-cCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcc-
Confidence 4567899999999987 4689999999999999 9998 9999999999987643 4465 5555665554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
+|++|||+.+|+.+| +++|+.++++.+|+ . .++ +.+.++.|+.+.|+
T Consensus 159 ---~~~~iGD~~nDi~~~----~~aG~~~i~~~~~~-~-------~a~--~v~~~~~el~~~l~ 205 (207)
T 2go7_A 159 ---NTYYIGDRTLDVEFA----QNSGIQSINFLEST-Y-------EGN--HRIQALADISRIFE 205 (207)
T ss_dssp ---GEEEEESSHHHHHHH----HHHTCEEEESSCCS-C-------TTE--EECSSTTHHHHHTS
T ss_pred ---cEEEECCCHHHHHHH----HHCCCeEEEEecCC-C-------CCC--EEeCCHHHHHHHHh
Confidence 599999999999999 99999999999987 4 334 56679999987764
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.58 E-value=9.3e-15 Score=123.14 Aligned_cols=120 Identities=11% Similarity=0.064 Sum_probs=91.9
Q ss_pred hcCCCcccHHHHHHhc----CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcC-
Q 027798 86 GANRLYPGVSDALKLA----SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKP- 152 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L----~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~- 152 (218)
....++||+.++|+.| +.+++|+||++...+...++. +|+. +|+.+++++.. |||+ ++++++...
T Consensus 111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~-~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 188 (275)
T 2qlt_A 111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDI-LKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPIN 188 (275)
T ss_dssp TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHH-HTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCC
T ss_pred cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHH-cCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCcc
Confidence 4467899999999877 357999999999999999999 9987 58888887643 7777 455555500
Q ss_pred --CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 153 --EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 153 --~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
..+|++|++|||+.+|+++| +++|+.+++|.+|++ .+++....++ +.+.++.||.
T Consensus 189 ~~~~~~~~~i~~GDs~nDi~~a----~~AG~~~i~v~~~~~-~~~~~~~~ad--~v~~~~~el~ 245 (275)
T 2qlt_A 189 EQDPSKSKVVVFEDAPAGIAAG----KAAGCKIVGIATTFD-LDFLKEKGCD--IIVKNHESIR 245 (275)
T ss_dssp SSCGGGSCEEEEESSHHHHHHH----HHTTCEEEEESSSSC-HHHHTTSSCS--EEESSGGGEE
T ss_pred ccCCCcceEEEEeCCHHHHHHH----HHcCCEEEEECCCCC-HHHHhhCCCC--EEECChHHcC
Confidence 00444599999999999999 999999999999976 4445444555 5556887763
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.5e-15 Score=121.55 Aligned_cols=119 Identities=11% Similarity=0.144 Sum_probs=88.6
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----H---HHHhhhcC
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVN----V---LKQLQKKP 152 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~---l~~l~~~~ 152 (218)
....++||+.++|+.|+ .+++|+||++...+...++. +..+|+.+++++. + |+|+ + +++++++|
T Consensus 96 ~~~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~---l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~ 172 (240)
T 3smv_A 96 KNWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAK---LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEK 172 (240)
T ss_dssp GGCCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTT---TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCG
T ss_pred hcCCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHh---cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCc
Confidence 45689999999999884 69999999999998888875 5579999998853 2 6666 4 45555555
Q ss_pred CCCCCceEEEcCch-hhHHhccccccccCccEEEEe-----CCCCCHH-HHHhhcCCCceEEechhhHhhhc
Q 027798 153 EHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVD-----WGYNTPK-ERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 153 ~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~-----~G~~~~~-~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+ +|+||||+. +|+.+| +++|+.++++. |||+... ...... +.+.+.++.||.+.|
T Consensus 173 ~----~~~~vGD~~~~Di~~a----~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~--ad~v~~~~~el~~~l 234 (240)
T 3smv_A 173 K----DILHTAESLYHDHIPA----NDAGLVSAWIYRRHGKEGYGATHVPSRMPN--VDFRFNSMGEMAEAH 234 (240)
T ss_dssp G----GEEEEESCTTTTHHHH----HHHTCEEEEECTTCC-------CCCSSCCC--CSEEESSHHHHHHHH
T ss_pred h----hEEEECCCchhhhHHH----HHcCCeEEEEcCCCcccCCCCCCCCcCCCC--CCEEeCCHHHHHHHH
Confidence 4 499999996 999999 99999999997 5555432 222234 447777999998765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.56 E-value=4.2e-14 Score=113.26 Aligned_cols=111 Identities=16% Similarity=0.162 Sum_probs=83.6
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+.+ +.+++|+||+ ..+...++. +|+..+|+.+++++.. |+|+++..+....+.+|++|+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i 166 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLER-MNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI 166 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHH-TTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHH-cChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 46899999999877 4699999998 456778898 9999999999887643 566644443333334455599
Q ss_pred EEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
+|||+.+|+++| +++|+.++++. ..+++. .++ +.+.++.|+
T Consensus 167 ~iGD~~nDi~~a----~~aG~~~~~~~----~~~~~~--~a~--~v~~~~~el 207 (221)
T 2wf7_A 167 GLEDSQAGIQAI----KDSGALPIGVG----RPEDLG--DDI--VIVPDTSHY 207 (221)
T ss_dssp EEESSHHHHHHH----HHHTCEEEEES----CHHHHC--SSS--EEESSGGGC
T ss_pred EEeCCHHHHHHH----HHCCCEEEEEC----CHHHhc--ccc--chhcCHHhC
Confidence 999999999999 99999998873 344443 444 555677775
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.6e-15 Score=122.10 Aligned_cols=110 Identities=17% Similarity=0.049 Sum_probs=80.5
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--ChHH------HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVN------VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKPe------~l~~l~~~~~~~ 155 (218)
...++||+.++|+.| +.+++|+||++. .+...+++ +|+..+|+.+++++.. .||+ ++++++.+
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~---- 166 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEK-FDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP---- 166 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHH-HTCGGGCSEEC-----------CCHHHHHHHHHCSS----
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHh-cCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCC----
Confidence 457999999999987 468999999987 47899999 9999999999988654 5665 55555543
Q ss_pred CCceEEEcCchh-hHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 156 GLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 156 ~~e~l~IGDs~~-Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
| +||||+.+ |+.+| +++|+.++++.++... .++ + ..+.++.||.+.|
T Consensus 167 ~---~~vgD~~~~Di~~a----~~aG~~~i~v~~~~~~-~~~-----~--~~i~~l~el~~~l 214 (220)
T 2zg6_A 167 A---VHVGDIYELDYIGA----KRSYVDPILLDRYDFY-PDV-----R--DRVKNLREALQKI 214 (220)
T ss_dssp E---EEEESSCCCCCCCS----SSCSEEEEEBCTTSCC-TTC-----C--SCBSSHHHHHHHH
T ss_pred e---EEEcCCchHhHHHH----HHCCCeEEEECCCCCC-CCc-----c--eEECCHHHHHHHH
Confidence 3 99999998 99999 9999999999875221 111 2 3456888887655
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=9e-15 Score=117.47 Aligned_cols=121 Identities=10% Similarity=0.007 Sum_probs=89.4
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-------------C-ChHHHHHHh
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------G-PKVNVLKQL 148 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-------------~-pKPe~l~~l 148 (218)
....++||+.++|+.| +.+++|+||++...++..++. +|+..+|+.+++.+. + |||++++.+
T Consensus 72 ~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~ 150 (217)
T 3m1y_A 72 ESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDL-LHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVL 150 (217)
T ss_dssp TTCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHH
T ss_pred hcCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH-cCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHH
Confidence 3467999999999988 358999999999999999999 999999998863321 2 777744443
Q ss_pred hhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
....+.+|++|+||||+.+|+.+| +++|+.++. +..+.+. ..++.++.-.+|.++..++
T Consensus 151 ~~~~g~~~~~~i~vGDs~~Di~~a----~~aG~~~~~-----~~~~~l~-~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 151 QRLLNISKTNTLVVGDGANDLSMF----KHAHIKIAF-----NAKEVLK-QHATHCINEPDLALIKPLI 209 (217)
T ss_dssp HHHHTCCSTTEEEEECSGGGHHHH----TTCSEEEEE-----SCCHHHH-TTCSEEECSSBGGGGTTC-
T ss_pred HHHcCCCHhHEEEEeCCHHHHHHH----HHCCCeEEE-----CccHHHH-HhcceeecccCHHHHHHHh
Confidence 333333444599999999999999 999997654 2234443 4577666666777776553
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-15 Score=119.00 Aligned_cols=95 Identities=19% Similarity=0.186 Sum_probs=74.5
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCC---------------chHHHHHHHHHhcCCCCCCCeeE-e-----CCCC--
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRLY-G-----LGTG-- 139 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~---------------~~~~~~~~L~~~~gl~~~fd~i~-~-----~~~~-- 139 (218)
....++||+.++|+.| +.+++|+||+ ....++..|+. +|+. |+.|+ + .+.+
T Consensus 39 ~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~v~~s~~~~~~~~~~~ 115 (176)
T 2fpr_A 39 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQ--FDEVLICPHLPADECDCR 115 (176)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHH-TTCC--EEEEEEECCCGGGCCSSS
T ss_pred HHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHH-cCCC--eeEEEEcCCCCccccccc
Confidence 4568999999999988 4699999999 67889999999 9987 88886 4 2333
Q ss_pred -ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 140 -PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 140 -pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
|+|+ ++++++++| ++|+||||+..|+++| +++||.++++.+|-.
T Consensus 116 KP~p~~~~~~~~~~gi~~----~~~l~VGD~~~Di~~A----~~aG~~~i~v~~~~~ 164 (176)
T 2fpr_A 116 KPKVKLVERYLAEQAMDR----ANSYVIGDRATDIQLA----ENMGINGLRYDRETL 164 (176)
T ss_dssp TTSCGGGGGGC----CCG----GGCEEEESSHHHHHHH----HHHTSEEEECBTTTB
T ss_pred CCCHHHHHHHHHHcCCCH----HHEEEEcCCHHHHHHH----HHcCCeEEEEcCCcc
Confidence 5555 455555554 4599999999999999 999999999988743
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.1e-14 Score=114.07 Aligned_cols=117 Identities=9% Similarity=0.087 Sum_probs=90.2
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCC-CeeEeCCCC-------ChHH----HHHHhhhc
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLGTG-------PKVN----VLKQLQKK 151 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~f-d~i~~~~~~-------pKPe----~l~~l~~~ 151 (218)
....++||+.++|+.|+ .+++|+||++...++..+++ +|+..+| +.+++++.+ |||+ ++++++..
T Consensus 66 ~~~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~ 144 (206)
T 1rku_A 66 ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TTCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred HhcCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHH-cCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhc
Confidence 34689999999999885 58999999999999999999 9999999 566654321 6665 78888876
Q ss_pred CCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 152 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++ |+||||+.+|+.+| +++|+.++. +..+.+....++.+ .+.++.++.+.|
T Consensus 145 ~~~----~~~iGD~~~Di~~a----~~aG~~~~~-----~~~~~~~~~~~~~~-~~~~~~~l~~~l 196 (206)
T 1rku_A 145 YYR----VIAAGDSYNDTTML----SEAHAGILF-----HAPENVIREFPQFP-AVHTYEDLKREF 196 (206)
T ss_dssp TCE----EEEEECSSTTHHHH----HHSSEEEEE-----SCCHHHHHHCTTSC-EECSHHHHHHHH
T ss_pred CCE----EEEEeCChhhHHHH----HhcCccEEE-----CCcHHHHHHHhhhc-cccchHHHHHHH
Confidence 655 99999999999999 999997552 22344555555532 356888887654
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.5e-14 Score=117.46 Aligned_cols=120 Identities=12% Similarity=0.207 Sum_probs=85.9
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCC--CCCeeE---------eCCCC-------ChHHHH
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLY---------GLGTG-------PKVNVL 145 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~--~fd~i~---------~~~~~-------pKPe~l 145 (218)
...++||+.++|+.| |.+++|+||++...++..+++ +|+.. +|+.++ |.+.. +||+++
T Consensus 84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 162 (225)
T 1nnl_A 84 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 162 (225)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH-cCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence 357999999999987 579999999999999999999 99974 777653 33321 688855
Q ss_pred HHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 146 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
..+....+. ++|+||||+.+|+.+| +++|+ ++++.. ....+.....++ +.+.++.|+.+.|+
T Consensus 163 ~~~~~~~~~--~~~~~vGDs~~Di~~a----~~ag~-~i~~~~--~~~~~~~~~~~~--~~~~~~~el~~~l~ 224 (225)
T 1nnl_A 163 KLLKEKFHF--KKIIMIGDGATDMEAC----PPADA-FIGFGG--NVIRQQVKDNAK--WYITDFVELLGELE 224 (225)
T ss_dssp HHHHHHHCC--SCEEEEESSHHHHTTT----TTSSE-EEEECS--SCCCHHHHHHCS--EEESCGGGGCC---
T ss_pred HHHHHHcCC--CcEEEEeCcHHhHHHH----HhCCe-EEEecC--ccccHHHHhcCC--eeecCHHHHHHHHh
Confidence 444332221 3499999999999999 99999 766643 322222234555 66679999987663
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.49 E-value=7e-15 Score=119.94 Aligned_cols=99 Identities=15% Similarity=0.089 Sum_probs=81.2
Q ss_pred CCcccHHHHHHhcC--CCEEEEeCCchHHHHHHH------HHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcC
Q 027798 89 RLYPGVSDALKLAS--SRIYIVTSNQSRFVETLL------RELAGVTITPDRLYGLGT-G---PKVN----VLKQLQKKP 152 (218)
Q Consensus 89 ~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L------~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~ 152 (218)
.++||+.++|+.|+ .+++|+||++...+..++ +. +|+..+|+.+++++. + |+|+ ++++++++|
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRT-FKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTT-BCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhcc-CCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 57899999999885 589999999999988655 66 889899999998753 2 6666 666666655
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHH
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
++ |+||||+.+|+++| +++|+.++++.+|...++.+
T Consensus 191 ~~----~~~vGD~~~Di~~a----~~aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 191 KE----TFFIDDSEINCKVA----QELGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp GG----EEEECSCHHHHHHH----HHTTCEEECCCTTCCGGGGG
T ss_pred HH----eEEECCCHHHHHHH----HHcCCEEEEECCHHHHHHHh
Confidence 55 99999999999999 99999999999886554433
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.47 E-value=2e-13 Score=107.35 Aligned_cols=99 Identities=19% Similarity=0.229 Sum_probs=77.9
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+.+ +.+++|+||++. .++..++. +|+..+|+.+++++.. |||+++..+....+.+ +|+
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~ 156 (190)
T 2fi1_A 81 PILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGL 156 (190)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEE
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHH-cCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEE
Confidence 34999999999987 479999999875 67888999 9999999999987543 6777443333222222 499
Q ss_pred EEcCchhhHHhccccccccCccEEEEeCCCCCHH
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 194 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~ 194 (218)
+|||+.+|+.+| +++|+.++++.+|+..++
T Consensus 157 ~iGD~~~Di~~a----~~aG~~~~~~~~~~~~~~ 186 (190)
T 2fi1_A 157 VIGDRPIDIEAG----QAAGLDTHLFTSIVNLRQ 186 (190)
T ss_dssp EEESSHHHHHHH----HHTTCEEEECSCHHHHHH
T ss_pred EEcCCHHHHHHH----HHcCCeEEEECCCCChhh
Confidence 999999999999 999999999988754433
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.7e-14 Score=114.38 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=84.4
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHh-----cCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcC
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLREL-----AGVTITPDRLYGLGT-G---PKVN----VLKQLQKKP 152 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~-----~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~ 152 (218)
..++||+.++|+.|+ .+++|+||++...+...++.+ +|+..+|+.+++++. + |+|+ +++++++++
T Consensus 88 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 167 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKP 167 (211)
T ss_dssp EEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCG
T ss_pred cccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCCh
Confidence 468999999999884 699999999999988888752 388899999998753 2 7777 555566555
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHh
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 198 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~ 198 (218)
++|+||||+.+|+.+| +++|+.++++.+|...++.+.+
T Consensus 168 ----~~~~~igD~~~Di~~a----~~aG~~~~~~~~~~~~~~~l~~ 205 (211)
T 2i6x_A 168 ----EETLFIDDGPANVATA----ERLGFHTYCPDNGENWIPAITR 205 (211)
T ss_dssp ----GGEEEECSCHHHHHHH----HHTTCEEECCCTTCCCHHHHHH
T ss_pred ----HHeEEeCCCHHHHHHH----HHcCCEEEEECCHHHHHHHHHH
Confidence 4599999999999999 9999999999999877766544
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.4e-14 Score=128.67 Aligned_cols=104 Identities=21% Similarity=0.211 Sum_probs=80.9
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCC------chHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHh
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSN------QSRFVETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQL 148 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~------~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l 148 (218)
....++||+.++|+.| |++++|+||+ ........+ .|+..+||.|++++. + |+|+ +++++
T Consensus 97 ~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~---~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~l 173 (555)
T 3i28_A 97 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM---CELKMHFDFLIESCQVGMVKPEPQIYKFLLDTL 173 (555)
T ss_dssp HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH---HHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred hhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh---hhhhhheeEEEeccccCCCCCCHHHHHHHHHHc
Confidence 4568999999999988 4799999998 433333332 277889999999853 2 6666 66777
Q ss_pred hhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhc
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAA 200 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~ 200 (218)
+++|++ |+||||+.+|+++| +++||.++++.+++...+.+....
T Consensus 174 g~~p~~----~~~v~D~~~di~~a----~~aG~~~~~~~~~~~~~~~l~~~~ 217 (555)
T 3i28_A 174 KASPSE----VVFLDDIGANLKPA----RDLGMVTILVQDTDTALKELEKVT 217 (555)
T ss_dssp TCCGGG----EEEEESCHHHHHHH----HHHTCEEEECSSHHHHHHHHHHHH
T ss_pred CCChhH----EEEECCcHHHHHHH----HHcCCEEEEECCCccHHHHHHhhh
Confidence 766555 99999999999999 999999999998876666655543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.2e-15 Score=124.76 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=90.4
Q ss_pred CCCcccHHHHHHhc--CCCEEEEeCCchHHH--HHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCce
Q 027798 88 NRLYPGVSDALKLA--SSRIYIVTSNQSRFV--ETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 88 ~~l~~gv~e~L~~L--~~~l~IvTn~~~~~~--~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~ 159 (218)
..+||++.++|+.| +.++ |+||++.... ...+....++..+|+.+++++.. |+|++++.+... .+|++|
T Consensus 129 ~~~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~ 205 (263)
T 1zjj_A 129 DLTYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEEL 205 (263)
T ss_dssp TCBHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEE
T ss_pred CCCHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccE
Confidence 46899999999877 4566 9999987443 12221102355578888887642 777755554333 567779
Q ss_pred EEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 160 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 160 l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
+||||+. +|+.+| +++|+.+++|.+|+...+++......+.+.+.++.||.+.|+
T Consensus 206 ~~VGD~~~~Di~~A----~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 206 WMVGDRLDTDIAFA----KKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp EEEESCTTTHHHHH----HHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred EEECCChHHHHHHH----HHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence 9999996 999999 999999999999998877765543345577789999988764
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-13 Score=117.99 Aligned_cols=93 Identities=17% Similarity=0.087 Sum_probs=70.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHH---HHHHHHHh-------cCCCCCCCeeEeCCCC---ChHH----HHHH
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRF---VETLLREL-------AGVTITPDRLYGLGTG---PKVN----VLKQ 147 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~---~~~~L~~~-------~gl~~~fd~i~~~~~~---pKPe----~l~~ 147 (218)
..+|||+.++|+.| |++++|+||++... +...|++. +|+ +|+.+++.+.. |+|+ ++++
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~~ 264 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFWK 264 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCCCcHHHHHHHHHHHH
Confidence 34699999999987 57999999999653 23444430 377 68999886543 7776 4455
Q ss_pred hhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 148 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
++..+. +.|+||||+.+|+++| ++|||++++|+||
T Consensus 265 ~~~~~~---~~~~~vgD~~~di~~a----~~aG~~~~~v~~G 299 (301)
T 1ltq_A 265 HIAPHF---DVKLAIDDRTQVVEMW----RRIGVECWQVASG 299 (301)
T ss_dssp HTTTTC---EEEEEEECCHHHHHHH----HHTTCCEEECSCC
T ss_pred Hhcccc---ceEEEeCCcHHHHHHH----HHcCCeEEEecCC
Confidence 543321 2379999999999999 9999999999999
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.43 E-value=4.9e-15 Score=122.49 Aligned_cols=123 Identities=10% Similarity=0.053 Sum_probs=90.7
Q ss_pred CCcccHHHHHHhc--CCCEEEEeCCchHHHHHHHHHhcCCCCCCC---eeEeCCCC----ChHHHHHHhhhcCCCCCCce
Q 027798 89 RLYPGVSDALKLA--SSRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLGTG----PKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 89 ~l~~gv~e~L~~L--~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd---~i~~~~~~----pKPe~l~~l~~~~~~~~~e~ 159 (218)
.+||++.++|+.+ +.++ |+||++.......+.. +|+..+|+ .+++++.. |||+++..+....+.+|++|
T Consensus 122 ~~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 199 (259)
T 2ho4_A 122 FHYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLA-LGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEA 199 (259)
T ss_dssp CBHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEE-ECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGE
T ss_pred CCHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcc-cCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHE
Confidence 3789999998876 4688 9999987766566666 78888887 45565532 88886666555555566679
Q ss_pred EEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 160 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 160 l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+||||+. +|+.+| +++|+++++|.||.....+.......+.+.+.++.|+.+.+
T Consensus 200 ~~iGD~~~~Di~~a----~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 200 VMIGDDCRDDVDGA----QNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp EEEESCTTTTHHHH----HHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred EEECCCcHHHHHHH----HHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 9999998 999999 99999999999995443332221233446777999998765
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.6e-13 Score=119.46 Aligned_cols=124 Identities=14% Similarity=0.088 Sum_probs=90.9
Q ss_pred hhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-----------CC---ChHHHHH
Q 027798 84 WIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----------TG---PKVNVLK 146 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-----------~~---pKPe~l~ 146 (218)
+.....++||+.++|+.| |.+++|+||++...++..+++ +|+..+|+.+++.+ .. |||+++.
T Consensus 174 ~~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~-lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~ 252 (317)
T 4eze_A 174 VCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKAR-YQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLV 252 (317)
T ss_dssp HHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHH
T ss_pred HHhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHH-cCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHH
Confidence 345678999999999987 579999999999999999999 99999998776421 11 6666443
Q ss_pred HhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 147 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
.+..+.+.+|++|+||||+.+|+.+| +++|+.+++ + ..+... ..++.++...++.++.+.|+
T Consensus 253 ~~~~~lgv~~~~~i~VGDs~~Di~aa----~~AG~~va~---~-~~~~~~--~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 253 DLAARLNIATENIIACGDGANDLPML----EHAGTGIAW---K-AKPVVR--EKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHH----HHSSEEEEE---S-CCHHHH--HHCCEEESSSCGGGGGGGTC
T ss_pred HHHHHcCCCcceEEEEeCCHHHHHHH----HHCCCeEEe---C-CCHHHH--HhcCeeeCCCCHHHHHHHHH
Confidence 33332233444599999999999999 999985544 3 333322 34555677778888887764
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=5.7e-15 Score=126.69 Aligned_cols=126 Identities=13% Similarity=0.137 Sum_probs=90.9
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHH--H-HHHHHhcC-CCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCC
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFV--E-TLLRELAG-VTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~--~-~~L~~~~g-l~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~ 157 (218)
..+||++.++|+.|+ ..++|+||++.... . ..+.. +| +..+|+.+++++.. |||++++.+....+.+|+
T Consensus 155 ~~~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~ 233 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPG-TGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPA 233 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEEC-HHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGG
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCC-CcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChH
Confidence 457899999999874 24999999986543 1 23333 44 55677777776532 777755555444445566
Q ss_pred ceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHh------hcCCCceEEechhhHhhhcC
Q 027798 158 RLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAE------AASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 158 e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~------~~~~~~i~~~~l~el~~~~~ 218 (218)
+|+||||+. +|+.+| +++|+.+++|.||++..+++.. ....+.+.+.++.||.+.++
T Consensus 234 e~l~vGD~~~~Di~~a----~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 234 RTLMVGDRLETDILFG----HRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp GEEEEESCTTTHHHHH----HHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred HEEEECCCchHHHHHH----HHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 699999996 999999 9999999999999988776643 12234477779999988775
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.8e-15 Score=128.12 Aligned_cols=114 Identities=14% Similarity=0.099 Sum_probs=84.2
Q ss_pred CcccHHHHHHhcCCCEEEEeCCchHHH--H--HHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHh----hhcCC
Q 027798 90 LYPGVSDALKLASSRIYIVTSNQSRFV--E--TLLRELAGVTITPDRLYGLGTG----PKVN----VLKQL----QKKPE 153 (218)
Q Consensus 90 l~~gv~e~L~~L~~~l~IvTn~~~~~~--~--~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l----~~~~~ 153 (218)
.|+++.+.|+..+.+ +|+||++.... . .+++. .|+..+|+.+++++.. |+|+ +++++ +++|
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~- 225 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAI-GGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISK- 225 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECH-HHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCG-
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccC-ChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCc-
Confidence 456666656555778 99999987655 3 22355 6788899999988743 5555 55666 5544
Q ss_pred CCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHH----hhcCCCceEEechhhH
Q 027798 154 HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERA----EAASMPRIQLLQLSDF 213 (218)
Q Consensus 154 ~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~----~~~~~~~i~~~~l~el 213 (218)
++|+||||++ +|+.+| +++||++++|.||+.+.+++. ..+..+.+.+.++.||
T Consensus 226 ---~~~~~VGD~~~~Di~~A----~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 226 ---REILMVGDTLHTDILGG----NKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp ---GGEEEEESCTTTHHHHH----HHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred ---ceEEEECCCcHHHHHHH----HHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 4599999996 999999 999999999999998877765 3223444677788776
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=7.3e-15 Score=122.93 Aligned_cols=125 Identities=19% Similarity=0.182 Sum_probs=87.7
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHH---HHHHhcCCCCCCCeeEeCCC-C----ChHHHHHHhhhcCCCCCC
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVET---LLRELAGVTITPDRLYGLGT-G----PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~---~L~~~~gl~~~fd~i~~~~~-~----pKPe~l~~l~~~~~~~~~ 157 (218)
..+|+++.++|+.+. .++ |+||++...... .++. .++..+|+.+++.+. . |||++++.+....+.+|+
T Consensus 136 ~~~~~~~~~~l~~l~~~~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~ 213 (271)
T 1vjr_A 136 TLTYERLKKACILLRKGKFY-IATHPDINCPSKEGPVPDA-GSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKE 213 (271)
T ss_dssp TCCHHHHHHHHHHHTTTCEE-EESCCCSEECCTTSCEECH-HHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGG
T ss_pred CcCHHHHHHHHHHHHCCCeE-EEECCCccccCCCCccccc-cHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCc
Confidence 357899999988773 466 999987542211 2233 345556777666654 2 777744443333333445
Q ss_pred ceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 158 RLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 158 e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
+|+||||+. +|+++| +++|+.+++|.||+...+++......+.+.+.++.||.+.||
T Consensus 214 e~i~iGD~~~nDi~~a----~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 271 (271)
T 1vjr_A 214 RMAMVGDRLYTDVKLG----KNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAVQ 271 (271)
T ss_dssp GEEEEESCHHHHHHHH----HHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred eEEEECCCcHHHHHHH----HHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 599999995 999999 999999999999998887776543344577789999998875
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-12 Score=103.83 Aligned_cols=118 Identities=10% Similarity=0.142 Sum_probs=87.2
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC--CCCCe--eEeCCC-----C-Ch--HH----HH-HH
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT--ITPDR--LYGLGT-----G-PK--VN----VL-KQ 147 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~--~~fd~--i~~~~~-----~-pK--Pe----~l-~~ 147 (218)
..++||+.++|+.| +.+++|+||++...++..+++ +|+. .+|.. +++.+. . +| |+ .+ +.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADY-LNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-cCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 45899999999887 579999999999999999999 9984 34542 232221 1 33 32 33 33
Q ss_pred hhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 148 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++.++++ |+||||+.+|+.++ + +|+.++++.+|.+...+.....++ +.+.++.||.+.|
T Consensus 160 ~~~~~~~----~~~vGD~~~Di~~~----~-~G~~~~~v~~~~~~~~~~~~~~ad--~v~~~~~el~~~l 218 (219)
T 3kd3_A 160 KGLIDGE----VIAIGDGYTDYQLY----E-KGYATKFIAYMEHIEREKVINLSK--YVARNVAELASLI 218 (219)
T ss_dssp GGGCCSE----EEEEESSHHHHHHH----H-HTSCSEEEEECSSCCCHHHHHHCS--EEESSHHHHHHHH
T ss_pred hCCCCCC----EEEEECCHhHHHHH----h-CCCCcEEEeccCccccHHHHhhcc--eeeCCHHHHHHhh
Confidence 4665555 99999999999999 5 799999998887765444445566 6667999998765
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.2e-14 Score=115.80 Aligned_cols=101 Identities=18% Similarity=0.219 Sum_probs=79.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~~~~~ 156 (218)
..++||+.++|+.| +.+++|+||++...+...+++.+|+..+|+.+++++. + |+|+ ++++++.+++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~--- 166 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPS--- 166 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG---
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHH---
Confidence 47899999999987 4699999999988766655432467788999998753 2 6666 5566665554
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHH
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
+|+||||+.+|+.+| +++|+.++++.+|....+.+
T Consensus 167 -~~~~vgD~~~Di~~a----~~aG~~~~~~~~~~~~~~~l 201 (206)
T 2b0c_A 167 -DTVFFDDNADNIEGA----NQLGITSILVKDKTTIPDYF 201 (206)
T ss_dssp -GEEEEESCHHHHHHH----HTTTCEEEECCSTTHHHHHH
T ss_pred -HeEEeCCCHHHHHHH----HHcCCeEEEecCCchHHHHH
Confidence 499999999999999 99999999999886544444
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.36 E-value=3e-13 Score=111.39 Aligned_cols=114 Identities=15% Similarity=0.271 Sum_probs=84.7
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---------ChH----------
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---------PKV---------- 142 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---------pKP---------- 142 (218)
....++||+.++|+.| +.+++|+||++...++..++ |+..+ +.|++++. . +||
T Consensus 74 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~---~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~ 149 (236)
T 2fea_A 74 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE---GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG 149 (236)
T ss_dssp HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT---TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred cCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh---cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccC
Confidence 3468999999999988 57999999999998888876 66665 88887642 0 333
Q ss_pred ----HHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhc-CCCceEEechhhHhhhc
Q 027798 143 ----NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAA-SMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 143 ----e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~-~~~~i~~~~l~el~~~~ 217 (218)
.++++++.++++ |+||||+.+|+.+| +++|+.++ .||+ .+.+...+ ++ +.+.++.|+.+.|
T Consensus 150 ~~K~~~~~~~~~~~~~----~~~vGDs~~Di~~a----~~aG~~~~--~~~~--~~~~~~~~~~~--~~~~~~~el~~~l 215 (236)
T 2fea_A 150 CCKPSVIHELSEPNQY----IIMIGDSVTDVEAA----KLSDLCFA--RDYL--LNECREQNLNH--LPYQDFYEIRKEI 215 (236)
T ss_dssp SCHHHHHHHHCCTTCE----EEEEECCGGGHHHH----HTCSEEEE--CHHH--HHHHHHTTCCE--ECCSSHHHHHHHH
T ss_pred CcHHHHHHHHhccCCe----EEEEeCChHHHHHH----HhCCeeee--chHH--HHHHHHCCCCe--eecCCHHHHHHHH
Confidence 566777665554 99999999999999 99999885 3543 33443332 44 5566888887654
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.36 E-value=8.6e-15 Score=122.21 Aligned_cols=119 Identities=16% Similarity=0.139 Sum_probs=85.2
Q ss_pred cCCCcccHHHHHHhc--CCCEEEEeCCchHH--HHH-HHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 87 ANRLYPGVSDALKLA--SSRIYIVTSNQSRF--VET-LLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L--~~~l~IvTn~~~~~--~~~-~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
...+|||+.++|+.| +.++ |+||++... ... .++. .++..+|+.+++++.. |+|+ ++++++++++
T Consensus 124 ~~~~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 201 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGA-GSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKE 201 (264)
T ss_dssp TTCCHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECH-HHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGG
T ss_pred CCcCHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCC-cHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHH
Confidence 356899999999887 3465 999988732 111 2233 4466678888887642 6666 5555665554
Q ss_pred CCCCceEEEcCc-hhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 154 HQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 154 ~~~~e~l~IGDs-~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
+|+||||+ .+|+.+| +++|+.+++|.||+...+++......+.+.+.++.|+..
T Consensus 202 ----~~~~vGD~~~~Di~~a----~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~ 256 (264)
T 1yv9_A 202 ----QVIMVGDNYETDIQSG----IQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTF 256 (264)
T ss_dssp ----GEEEEESCTTTHHHHH----HHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCCT
T ss_pred ----HEEEECCCcHHHHHHH----HHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHhh
Confidence 49999999 5999999 999999999999998766654442234467779888753
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.2e-11 Score=100.40 Aligned_cols=92 Identities=15% Similarity=0.007 Sum_probs=69.3
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC-----------CC--C-ChHHHHHHhhhc
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-----------GT--G-PKVNVLKQLQKK 151 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~-----------~~--~-pKPe~l~~l~~~ 151 (218)
.++||+.++|+.| |.+++|+||++...++.++++ +|+..+|...+.. .. + +|++.+..+...
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARA-FGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 5799999999987 579999999999999999999 9997666443221 11 1 566544443332
Q ss_pred CC---CCCCceEEEcCchhhHHhccccccccCccEEE
Q 027798 152 PE---HQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 152 ~~---~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
.+ .+|++|+|||||.+|+.++ ++||+.++.
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~~~~----~~ag~~~~~ 203 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDVPLL----EAVTRPIAA 203 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGHHHH----HHSSEEEEE
T ss_pred cCCCcCchhheEEEeCCHhhHHHH----HhCCCeEEE
Confidence 23 3455599999999999999 999987764
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.31 E-value=2.7e-12 Score=109.27 Aligned_cols=111 Identities=20% Similarity=0.246 Sum_probs=87.9
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEc
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
...++||+.++|+.| +.+++|+||++...++..++. +|+..+|+.++. .+|..+++.++.. ++ |+|||
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~---~~K~~~~~~l~~~-~~----~~~vG 231 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAEVLP---HQKSEEVKKLQAK-EV----VAFVG 231 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCT---TCHHHHHHHHTTT-CC----EEEEE
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCceeeeecCh---HHHHHHHHHHhcC-Ce----EEEEE
Confidence 457999999999987 579999999999999999999 999988887652 1777799999876 55 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEE--echhhHhhhc
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTKL 217 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~--~~l~el~~~~ 217 (218)
|+.+|+.+| ++||+. +.||+.... ....++ +.+ .++.++.+.|
T Consensus 232 Ds~~Di~~a----~~ag~~---v~~~~~~~~--~~~~ad--~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 232 DGINDAPAL----AQADLG---IAVGSGSDV--AVESGD--IVLIRDDLRDVVAAI 276 (287)
T ss_dssp CTTTCHHHH----HHSSEE---EEECCCSCC--SSCCSS--EEESSSCTHHHHHHH
T ss_pred CCHHHHHHH----HHCCee---EEeCCCCHH--HHhhCC--EEEeCCCHHHHHHHH
Confidence 999999999 999996 445544321 122344 555 6888887654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-13 Score=115.93 Aligned_cols=114 Identities=14% Similarity=0.183 Sum_probs=90.5
Q ss_pred cCCCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEc
Q 027798 87 ANRLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
...++||+.++|+.|+ ++++|+||++...++.++++ +|+..+|+.++. ..|..++++++.++++ |+|||
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~p---~~k~~~~~~l~~~~~~----~~~VG 205 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKE-LNIQEYYSNLSP---EDKVRIIEKLKQNGNK----VLMIG 205 (263)
Confidence 3579999999999884 69999999999999999999 999999987762 1566788999887666 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+.+|+.+| ++||+ ++.||+++. .....++.++.-.++.++.+.+
T Consensus 206 D~~~D~~aa----~~Agv---~va~g~~~~--~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 206 DGVNDAAAL----ALADV---SVAMGNGVD--ISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 999999999 99995 577886543 3334566554225787776654
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.31 E-value=2.4e-14 Score=116.38 Aligned_cols=123 Identities=13% Similarity=0.110 Sum_probs=83.1
Q ss_pred cCCCcccHHHHHHhc---CCCEE---------------------------------EEeCCchHHHHHHHHHhcC-CCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIY---------------------------------IVTSNQSRFVETLLRELAG-VTIT 129 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~---------------------------------IvTn~~~~~~~~~L~~~~g-l~~~ 129 (218)
...+++|+.++|+.+ +.+++ ++||.+ ......++. +| +..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~-~~~~~~~ 162 (250)
T 2c4n_A 85 KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPA-CGALCAG 162 (250)
T ss_dssp CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBC-HHHHHHH
T ss_pred CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeec-chHHHHH
Confidence 346889998888876 45777 888876 333333333 44 4445
Q ss_pred CCeeEeCCC---C-ChHHHHHHhhhcCCCCCCceEEEcCc-hhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCc
Q 027798 130 PDRLYGLGT---G-PKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR 204 (218)
Q Consensus 130 fd~i~~~~~---~-pKPe~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~ 204 (218)
|+.+++.+. + |||++++.+....+.+|++|++|||+ .+|+++| +++|+.+++|.||+...+++......+.
T Consensus 163 ~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~----~~aG~~~~~v~~g~~~~~~~~~~~~~~~ 238 (250)
T 2c4n_A 163 IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAG----FQAGLETILVLSGVSSLDDIDSMPFRPS 238 (250)
T ss_dssp HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHH----HHTTCEEEEESSSSCCGGGGSSCSSCCS
T ss_pred HHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHH----HHcCCeEEEECCCCCChhhhhhcCCCCC
Confidence 565555553 2 88884444433333445559999999 6999999 9999999999999887666543222344
Q ss_pred eEEechhhHhh
Q 027798 205 IQLLQLSDFCT 215 (218)
Q Consensus 205 i~~~~l~el~~ 215 (218)
+.+.++.||.+
T Consensus 239 ~v~~~~~el~~ 249 (250)
T 2c4n_A 239 WIYPSVAEIDV 249 (250)
T ss_dssp EEESSGGGCCC
T ss_pred EEECCHHHhhc
Confidence 66678888754
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=3.8e-14 Score=113.66 Aligned_cols=110 Identities=16% Similarity=0.217 Sum_probs=86.6
Q ss_pred hcCCCcccHHHHHHhc----CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEE
Q 027798 86 GANRLYPGVSDALKLA----SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L----~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~ 161 (218)
....++||+.++|+.| +.+++|+||++...++..+++ +|+ |+.++++ ++++++++.|++ |+|
T Consensus 70 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~gl---f~~i~~~------~~~~~~~~~~~~----~~~ 135 (193)
T 2i7d_A 70 LDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEK-YRW---VEQHLGP------QFVERIILTRDK----TVV 135 (193)
T ss_dssp TTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHH-HHH---HHHHHCH------HHHTTEEECSCG----GGB
T ss_pred ccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHH-hCc---hhhhcCH------HHHHHcCCCccc----EEE
Confidence 3568999999999987 358999999999999999999 998 8888764 477888876666 999
Q ss_pred EcCchhh----HHhcccccc-ccCccEEEEeCCCCCHHHHHhhcCCCceEEech-hhHhhhc
Q 027798 162 VEDRLAT----LKNVIKEPE-LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL-SDFCTKL 217 (218)
Q Consensus 162 IGDs~~D----i~aA~~~~~-~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l-~el~~~~ 217 (218)
|||+..| +.+| + ++||+++++.++++.... ..+. ...+.++ +++.++|
T Consensus 136 vgDs~~dD~~~i~~A----~~~aG~~~i~~~~~~~~~~~---~~~~-~~~v~~~~~~~~~~~ 189 (193)
T 2i7d_A 136 LGDLLIDDKDTVRGQ----EETPSWEHILFTCCHNRHLV---LPPT-RRRLLSWSDNWREIL 189 (193)
T ss_dssp CCSEEEESSSCCCSS----CSSCSSEEEEECCGGGTTCC---CCTT-SCEECSTTSCHHHHH
T ss_pred ECCchhhCcHHHhhc----ccccccceEEEEeccCcccc---cccc-hHHHhhHHHHHHHHh
Confidence 9999999 9999 9 999999999987764422 1222 2346677 5555544
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.8e-12 Score=111.38 Aligned_cols=123 Identities=15% Similarity=0.132 Sum_probs=88.2
Q ss_pred hhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEe-----------CCCC---ChHHHHH
Q 027798 84 WIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-----------LGTG---PKVNVLK 146 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~-----------~~~~---pKPe~l~ 146 (218)
+.....++||+.++|+.| +.+++|+||+....++.++++ +|+..+|+..+. .+.. |||+++.
T Consensus 173 ~~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~ 251 (335)
T 3n28_A 173 VRETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQ-LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILL 251 (335)
T ss_dssp HHTTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHH
T ss_pred HHHhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHH
Confidence 344568999999999987 579999999999999999999 999888775431 1222 6777444
Q ss_pred HhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 147 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.+....+.+|++|+||||+.+|+.+| +++|+.++. ...+. . ...++.++...++.++...|
T Consensus 252 ~~~~~lgi~~~~~v~vGDs~nDi~~a----~~aG~~va~----~~~~~-~-~~~a~~v~~~~~l~~v~~~L 312 (335)
T 3n28_A 252 TLAQQYDVEIHNTVAVGDGANDLVMM----AAAGLGVAY----HAKPK-V-EAKAQTAVRFAGLGGVVCIL 312 (335)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHH----HHSSEEEEE----SCCHH-H-HTTSSEEESSSCTHHHHHHH
T ss_pred HHHHHcCCChhhEEEEeCCHHHHHHH----HHCCCeEEe----CCCHH-H-HhhCCEEEecCCHHHHHHHH
Confidence 43333334445599999999999999 999996553 23333 3 23456666666777776654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.8e-12 Score=113.24 Aligned_cols=122 Identities=15% Similarity=0.139 Sum_probs=88.1
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE-------eC----CCC---ChHHHHHH
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLY-------GL----GTG---PKVNVLKQ 147 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~-------~~----~~~---pKPe~l~~ 147 (218)
.....++||+.++|+.| |.+++|+||+....++..+++ +|+..+|+..+ ++ +.. |||+++..
T Consensus 252 ~~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~ 330 (415)
T 3p96_A 252 AGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEE-LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALRE 330 (415)
T ss_dssp HHHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHH
T ss_pred HHhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHH
Confidence 34568999999999987 579999999999999999999 99988776432 21 221 67764444
Q ss_pred hhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 148 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+....+.+|++|+||||+.+|+.+| +++|+.+++ + ..+ .+ ...++..+...++..+...+
T Consensus 331 ~~~~~gi~~~~~i~vGD~~~Di~~a----~~aG~~va~---~-~~~-~~-~~~ad~~i~~~~l~~ll~~l 390 (415)
T 3p96_A 331 FAQRAGVPMAQTVAVGDGANDIDML----AAAGLGIAF---N-AKP-AL-REVADASLSHPYLDTVLFLL 390 (415)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHH----HHSSEEEEE---S-CCH-HH-HHHCSEEECSSCTTHHHHHT
T ss_pred HHHHcCcChhhEEEEECCHHHHHHH----HHCCCeEEE---C-CCH-HH-HHhCCEEEccCCHHHHHHHh
Confidence 4333334455599999999999999 999986653 2 333 33 23466667667888777655
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=5.4e-12 Score=100.11 Aligned_cols=119 Identities=12% Similarity=0.065 Sum_probs=83.9
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC-C-----------C-C-ChHHHHHHhh
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-G-----------T-G-PKVNVLKQLQ 149 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~-~-----------~-~-pKPe~l~~l~ 149 (218)
...++||+.++|+.+ +.+++|+||++...++..++. +|+..+|+.++.. + . . +||+.+..+.
T Consensus 74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~ 152 (211)
T 1l7m_A 74 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 152 (211)
T ss_dssp TCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHH
Confidence 457889999999877 468999999999988899999 9998777554321 1 1 2 6787444433
Q ss_pred hcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEec--hhhHhhhcC
Q 027798 150 KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCTKLK 218 (218)
Q Consensus 150 ~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~--l~el~~~~~ 218 (218)
...+.++++|++|||+.+|+.+| ++||+.+ ++ + .. +.+ ...++ +.+.+ +.+|.+.++
T Consensus 153 ~~lgi~~~~~~~iGD~~~Di~~~----~~ag~~~-~~--~-~~-~~~-~~~a~--~v~~~~~~~~l~~~l~ 211 (211)
T 1l7m_A 153 KIEGINLEDTVAVGDGANDISMF----KKAGLKI-AF--C-AK-PIL-KEKAD--ICIEKRDLREILKYIK 211 (211)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHH----HHCSEEE-EE--S-CC-HHH-HTTCS--EEECSSCGGGGGGGCC
T ss_pred HHcCCCHHHEEEEecChhHHHHH----HHCCCEE-EE--C-CC-HHH-Hhhcc--eeecchhHHHHHHhhC
Confidence 33334455599999999999999 9999953 33 3 22 333 23455 44556 999988765
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=8.5e-12 Score=97.06 Aligned_cols=108 Identities=12% Similarity=0.007 Sum_probs=76.0
Q ss_pred HHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccc
Q 027798 95 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~ 174 (218)
.+.|+..+.+++|+||++...++..+++ +|+..+|+.+ .|||+++..+....+.+|++|+||||+.+|+.+|
T Consensus 40 l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~-- 111 (164)
T 3e8m_A 40 IFWAHNKGIPVGILTGEKTEIVRRRAEK-LKVDYLFQGV-----VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLL-- 111 (164)
T ss_dssp HHHHHHTTCCEEEECSSCCHHHHHHHHH-TTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHH--
T ss_pred HHHHHHCCCEEEEEeCCChHHHHHHHHH-cCCCEeeccc-----CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH--
Confidence 5566666889999999999999999999 9998777653 4899844444333334455599999999999999
Q ss_pred cccccCccEEEEeCCCCCHHHHHhhcCCCceEEec----hhhHhhhc
Q 027798 175 EPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ----LSDFCTKL 217 (218)
Q Consensus 175 ~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~----l~el~~~~ 217 (218)
+++|+.++. +.+.+ ... ..++.++.-.+ +.++++.+
T Consensus 112 --~~ag~~~~~---~~~~~-~~~-~~ad~v~~~~~~~g~~~e~~~~l 151 (164)
T 3e8m_A 112 --KRVGIAGVP---ASAPF-YIR-RLSTIFLEKRGGEGVFREFVEKV 151 (164)
T ss_dssp --TTSSEEECC---TTSCH-HHH-TTCSSCCCCCTTTTHHHHHHHHH
T ss_pred --HHCCCeEEc---CChHH-HHH-HhCcEEeccCCCCcHHHHHHHHH
Confidence 999996543 22333 332 34565555333 66666543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-11 Score=110.14 Aligned_cols=91 Identities=22% Similarity=0.178 Sum_probs=70.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCc------------hHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQ------------SRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VL 145 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~------------~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l 145 (218)
.+|||+.++|+.| |++++|+||++ ...+..+|+. +|+. |+.+++++.. |+|+ ++
T Consensus 87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~-lgl~--fd~i~~~~~~~~~KP~p~~~~~a~ 163 (416)
T 3zvl_A 87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQ 163 (416)
T ss_dssp ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSTTSTTSSHHHHHHH
T ss_pred hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHH-cCCC--EEEEEECCCCCCCCCCHHHHHHHH
Confidence 3899999999988 57999999977 2337888999 9984 9999998654 5555 44
Q ss_pred HHhhhcCCCCCCceEEEcCch-----------------hhHHhccccccccCccEEEE
Q 027798 146 KQLQKKPEHQGLRLHFVEDRL-----------------ATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~-----------------~Di~aA~~~~~~aGi~~i~v 186 (218)
++++.....+|++|+||||+. +|+.+| +++|++++..
T Consensus 164 ~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A----~~aGi~f~~p 217 (416)
T 3zvl_A 164 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFA----LNVGLPFATP 217 (416)
T ss_dssp HHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHH----HHHTCCEECH
T ss_pred HHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHH----HHcCCcccCc
Confidence 445411124566699999997 899999 9999998753
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.19 E-value=2e-12 Score=105.97 Aligned_cols=91 Identities=13% Similarity=0.047 Sum_probs=67.7
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE-eCC---CC---ChHH----HHHHhhhcCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLY-GLG---TG---PKVN----VLKQLQKKPE 153 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~-~~~---~~---pKPe----~l~~l~~~~~ 153 (218)
..++||+.++|+.| |.+++|+||++...++..++. +..+|+.++ +.+ .. |+|+ +++++++
T Consensus 87 ~~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~---l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~--- 160 (211)
T 2b82_A 87 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT---LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI--- 160 (211)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH---HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE---
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH---HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC---
Confidence 34688999999887 579999999987655555553 334566653 221 11 5555 5555543
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
|+||||+.+|+++| +++||++++|.||+++.
T Consensus 161 -----~l~VGDs~~Di~aA----~~aG~~~i~v~~g~~~~ 191 (211)
T 2b82_A 161 -----RIFYGDSDNDITAA----RDVGARGIRILRASNST 191 (211)
T ss_dssp -----EEEEESSHHHHHHH----HHTTCEEEECCCCTTCS
T ss_pred -----EEEEECCHHHHHHH----HHCCCeEEEEecCCCCc
Confidence 99999999999999 99999999999998754
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.19 E-value=5.1e-11 Score=95.62 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=64.2
Q ss_pred HHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcc
Q 027798 94 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 173 (218)
Q Consensus 94 v~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~ 173 (218)
+.+.|+..|.+++|+||+++..++.++++ +|+..+|+.+ .+||+++..+....+.+|++|+||||+.+|+.+|
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgl~~~f~~~-----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~- 126 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKS-LGIEHLFQGR-----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVI- 126 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHH-cCCHHHhcCc-----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHH-
Confidence 45556666889999999999999999999 9998888765 4899855444433334455599999999999999
Q ss_pred ccccccCccE
Q 027798 174 KEPELDGWNL 183 (218)
Q Consensus 174 ~~~~~aGi~~ 183 (218)
+++|+.+
T Consensus 127 ---~~ag~~~ 133 (189)
T 3mn1_A 127 ---RRVGLGM 133 (189)
T ss_dssp ---HHSSEEE
T ss_pred ---HHCCCeE
Confidence 9999854
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.19 E-value=2.5e-13 Score=109.23 Aligned_cols=108 Identities=18% Similarity=0.148 Sum_probs=84.3
Q ss_pred hcCCCcccHHHHHHhc----CCCEEEEeCCchHHHHHHHHHhcCCCC-CCCeeEeCCCCChHHHHHHhhhcCCCCCCceE
Q 027798 86 GANRLYPGVSDALKLA----SSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L----~~~l~IvTn~~~~~~~~~L~~~~gl~~-~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l 160 (218)
....++||+.++|+.| +.+++|+||+++..++..+++ +|+.. +|+ ..+++++++.|++ |+
T Consensus 72 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~f~----------~~~~~~l~~~~~~----~~ 136 (197)
T 1q92_A 72 FELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEK-YAWVEKYFG----------PDFLEQIVLTRDK----TV 136 (197)
T ss_dssp TTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHH-HHHHHHHHC----------GGGGGGEEECSCS----TT
T ss_pred hcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHH-hchHHHhch----------HHHHHHhccCCcc----EE
Confidence 3568999999999987 458999999999988899999 99888 886 2356667776666 99
Q ss_pred EEcCchhh----HHhcccccc-ccCccEEEEeCCCCCHHHHHhhcCCCceEEech-hhHhhh
Q 027798 161 FVEDRLAT----LKNVIKEPE-LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL-SDFCTK 216 (218)
Q Consensus 161 ~IGDs~~D----i~aA~~~~~-~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l-~el~~~ 216 (218)
||||+..| +++| + +|||++|++.++++... ..++. ...+.++ .++.++
T Consensus 137 ~vgDs~~dD~~~~~~a----~~~aG~~~i~~~~~~~~~~---~~~~~-~~~v~~~~~~l~~~ 190 (197)
T 1q92_A 137 VSADLLIDDRPDITGA----EPTPSWEHVLFTACHNQHL---QLQPP-RRRLHSWADDWKAI 190 (197)
T ss_dssp SCCSEEEESCSCCCCS----CSSCSSEEEEECCTTTTTC---CCCTT-CEEECCTTSCHHHH
T ss_pred EECcccccCCchhhhc----ccCCCceEEEecCcccccc---ccccc-chhhhhHHHHHHHH
Confidence 99999999 9999 9 99999999999887532 22332 2356677 355544
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-11 Score=103.31 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=84.6
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCc
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 165 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs 165 (218)
.++||+.++|+.| +.+++|+||++...++..+++ +|+..+|+.+++.+ |...++.+... .+ |+||||+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~~~~---k~~~~k~~~~~-~~----~~~vGD~ 214 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEE-LGLDDYFAEVLPHE---KAEKVKEVQQK-YV----TAMVGDG 214 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCGGG---HHHHHHHHHTT-SC----EEEEECT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCChhHhHhcCHHH---HHHHHHHHHhc-CC----EEEEeCC
Confidence 6899999999887 579999999999999999999 99999999887764 33334333322 24 9999999
Q ss_pred hhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 166 LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 166 ~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.+|+.+| ++||+ +|.||+++.+.+. .+++++...++.++.+.|
T Consensus 215 ~nDi~~~----~~Ag~---~va~~~~~~~~~~--~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 215 VNDAPAL----AQADV---GIAIGAGTDVAVE--TADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp TTTHHHH----HHSSE---EEECSCCSSSCCC--SSSEECSSCCTHHHHHHH
T ss_pred chhHHHH----HhCCc---eEEecCCcHHHHh--hCCEEEeCCCHHHHHHHH
Confidence 9999999 99995 7778876554332 344444446788776654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.18 E-value=8.8e-12 Score=98.16 Aligned_cols=111 Identities=13% Similarity=0.115 Sum_probs=83.1
Q ss_pred hhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC---------ChHHHHHHhhhc
Q 027798 84 WIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---------PKVNVLKQLQKK 151 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---------pKPe~l~~l~~~ 151 (218)
+.....++||+.++|+.| +.+++|+||++...++.. +. +|+..+|+.+.+.+.. .|..+++++
T Consensus 74 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--- 148 (201)
T 4ap9_A 74 TREKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KE-LGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--- 148 (201)
T ss_dssp GGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TT-TSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG---
T ss_pred HHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HH-cCchhheeeEEeeCCceECCcCCccCHHHHHHhc---
Confidence 345668999999999987 479999999999998888 88 9998877666554421 223366665
Q ss_pred CCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 152 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+|++|+||||+.+|+.+| +++|+. +++..+.. .++ +.+.++.|+.+.|
T Consensus 149 ---~~~~~i~iGD~~~Di~~~----~~ag~~-v~~~~~~~--------~ad--~v~~~~~el~~~l 196 (201)
T 4ap9_A 149 ---RDGFILAMGDGYADAKMF----ERADMG-IAVGREIP--------GAD--LLVKDLKELVDFI 196 (201)
T ss_dssp ---TTSCEEEEECTTCCHHHH----HHCSEE-EEESSCCT--------TCS--EEESSHHHHHHHH
T ss_pred ---CcCcEEEEeCCHHHHHHH----HhCCce-EEECCCCc--------ccc--EEEccHHHHHHHH
Confidence 344599999999999999 999996 55543322 444 6667888887765
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.17 E-value=3e-11 Score=93.72 Aligned_cols=84 Identities=15% Similarity=0.199 Sum_probs=64.2
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchh
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLA 167 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~ 167 (218)
.|+..++|+.| +.+++|+||++...++..+++ +|+..+|+. ..|||+++..+......+|++|+||||+.+
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~~-----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 111 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKE-LGVEEIYTG-----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVV 111 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHH-TTCCEEEEC-----C--CHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCHhhccC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 45566777766 579999999999999999999 998876653 228888544443333345555999999999
Q ss_pred hHHhccccccccCccEE
Q 027798 168 TLKNVIKEPELDGWNLY 184 (218)
Q Consensus 168 Di~aA~~~~~~aGi~~i 184 (218)
|+.+| +++|+.++
T Consensus 112 Di~~a----~~ag~~~~ 124 (162)
T 2p9j_A 112 DIEVM----KKVGFPVA 124 (162)
T ss_dssp GHHHH----HHSSEEEE
T ss_pred HHHHH----HHCCCeEE
Confidence 99999 99999865
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.8e-10 Score=90.93 Aligned_cols=104 Identities=13% Similarity=0.058 Sum_probs=76.3
Q ss_pred hhcCCCcccHHHHHHhcC--CCEEEEeCC---chH--HHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCC
Q 027798 85 IGANRLYPGVSDALKLAS--SRIYIVTSN---QSR--FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L~--~~l~IvTn~---~~~--~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~ 157 (218)
.....++||+.++|+.|+ .+++|+||+ ++. .....|.+++++..+|+.|++.+.. .+ +.
T Consensus 65 ~~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-------~l----~~--- 130 (180)
T 3bwv_A 65 FRNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-------II----LA--- 130 (180)
T ss_dssp GGSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-------GB----CC---
T ss_pred hccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-------ee----cc---
Confidence 345789999999999985 599999999 422 2244455536777888999888751 11 34
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+|||||.+|+.+ +|| +++++.|+++.. +.+...+.++.|+.+.|
T Consensus 131 -~l~ieDs~~~i~~------aaG-~~i~~~~~~~~~-------~~~~~~i~~~~el~~~l 175 (180)
T 3bwv_A 131 -DYLIDDNPKQLEI------FEG-KSIMFTASHNVY-------EHRFERVSGWRDVKNYF 175 (180)
T ss_dssp -SEEEESCHHHHHH------CSS-EEEEECCGGGTT-------CCSSEEECSHHHHHHHH
T ss_pred -cEEecCCcchHHH------hCC-CeEEeCCCcccC-------CCCceecCCHHHHHHHH
Confidence 9999999999853 479 999999887532 23456777999987654
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.12 E-value=4.8e-10 Score=88.90 Aligned_cols=106 Identities=17% Similarity=0.165 Sum_probs=74.1
Q ss_pred HHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcc
Q 027798 94 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 173 (218)
Q Consensus 94 v~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~ 173 (218)
+.+.|+..+.+++|+||++...++.++++ +|+. ++... .|||+++..+....+.++++|+||||+.+|+.++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgi~-----~~~~~-~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~- 118 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARK-LKIP-----VLHGI-DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCF- 118 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHH-HTCC-----EEESC-SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHH-cCCe-----eEeCC-CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHH-
Confidence 35666667899999999999999999999 9987 33332 4899855554444444555599999999999999
Q ss_pred ccccccCccEEEEeCCCCCHHHHHhhcCCCceEEec------hhhHhhhc
Q 027798 174 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ------LSDFCTKL 217 (218)
Q Consensus 174 ~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~------l~el~~~~ 217 (218)
+++|+.+ .++...+... ..++ +.+.+ +.++.+.|
T Consensus 119 ---~~ag~~v---~~~~~~~~~~--~~ad--~v~~~~~~~g~~~~l~~~l 158 (176)
T 3mmz_A 119 ---ALVGWPV---AVASAHDVVR--GAAR--AVTTVPGGDGAIREIASWI 158 (176)
T ss_dssp ---HHSSEEE---ECTTCCHHHH--HHSS--EECSSCTTTTHHHHHHHHH
T ss_pred ---HHCCCeE---ECCChhHHHH--HhCC--EEecCCCCCcHHHHHHHHH
Confidence 9999653 3444444322 2344 44445 66665543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.9e-10 Score=92.55 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=62.5
Q ss_pred HHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccc
Q 027798 95 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~ 174 (218)
.+.|+..+.+++|+||++...+...++. +|+..+|+.+ .|||+++..+....+.+|++|+||||+.+|+.++
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~-lgl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~-- 126 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQ-LGITHYYKGQ-----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLI-- 126 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHH-HTCCEEECSC-----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH--
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHH-cCCccceeCC-----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH--
Confidence 4455556789999999999999999999 9998777654 4889854444333334455599999999999999
Q ss_pred cccccCccE
Q 027798 175 EPELDGWNL 183 (218)
Q Consensus 175 ~~~~aGi~~ 183 (218)
+++|+.+
T Consensus 127 --~~ag~~~ 133 (191)
T 3n1u_A 127 --QQVGLGV 133 (191)
T ss_dssp --HHSSEEE
T ss_pred --HHCCCEE
Confidence 9999976
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.11 E-value=9.5e-11 Score=96.20 Aligned_cols=80 Identities=15% Similarity=0.180 Sum_probs=63.9
Q ss_pred HHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccc
Q 027798 95 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~ 174 (218)
.+.|+..|++++|+||++...++.++++ +|+..+|+.+ .|||+++..+....+.+|++|+||||+.+|+.++
T Consensus 85 L~~L~~~G~~l~I~T~~~~~~~~~~l~~-lgi~~~f~~~-----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~-- 156 (211)
T 3ij5_A 85 IRCLITSDIDVAIITGRRAKLLEDRANT-LGITHLYQGQ-----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVM-- 156 (211)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCCEEECSC-----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH--
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCchhhccc-----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHH--
Confidence 4566666889999999999999999999 9998877754 4899855444333334455599999999999999
Q ss_pred cccccCccEE
Q 027798 175 EPELDGWNLY 184 (218)
Q Consensus 175 ~~~~aGi~~i 184 (218)
++||+.++
T Consensus 157 --~~ag~~~a 164 (211)
T 3ij5_A 157 --AQVGLSVA 164 (211)
T ss_dssp --TTSSEEEE
T ss_pred --HHCCCEEE
Confidence 99998654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.07 E-value=2e-10 Score=93.09 Aligned_cols=80 Identities=20% Similarity=0.222 Sum_probs=62.9
Q ss_pred HHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccc
Q 027798 95 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~ 174 (218)
.+.|+..|.+++|+||++...++.++++ +|+..+|+.+ .|||+++..+....+.++++|+||||+.+|+.++
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~-lgi~~~~~~~-----k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~-- 132 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKA-LGISLIYQGQ-----DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVM-- 132 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHH-TTCCEEECSC-----SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHH--
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHH-cCCcEEeeCC-----CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH--
Confidence 4555566889999999999999999999 9998766532 4899855554444444555699999999999999
Q ss_pred cccccCccEE
Q 027798 175 EPELDGWNLY 184 (218)
Q Consensus 175 ~~~~aGi~~i 184 (218)
+++|+.++
T Consensus 133 --~~ag~~va 140 (195)
T 3n07_A 133 --EKVALRVC 140 (195)
T ss_dssp --TTSSEEEE
T ss_pred --HHCCCEEE
Confidence 99998643
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.04 E-value=4.1e-10 Score=95.23 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=75.9
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCc---hHHHHHHHHHhcCCC--CCCCeeEeCCCCChHHHHHHh-hhcCCCCCCc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQ---SRFVETLLRELAGVT--ITPDRLYGLGTGPKVNVLKQL-QKKPEHQGLR 158 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~---~~~~~~~L~~~~gl~--~~fd~i~~~~~~pKPe~l~~l-~~~~~~~~~e 158 (218)
..++||+.++|+.| |.+++|+||++ +..+...|+. +|+. .+|+.+++.+...||+....+ ......
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~-~Gl~~v~~~~vi~~~~~~~K~~~~~~~~~~~~~~---- 174 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLER-VGAPQATKEHILLQDPKEKGKEKRRELVSQTHDI---- 174 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHH-HTCSSCSTTTEEEECTTCCSSHHHHHHHHHHEEE----
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHH-cCCCcCCCceEEECCCCCCCcHHHHHHHHhCCCc----
Confidence 57999999999987 57999999999 6677888898 9998 788888887644445432222 122333
Q ss_pred eEEEcCchhhHHhcccccc-------c---------cCccEEEEeCCCCCHHH
Q 027798 159 LHFVEDRLATLKNVIKEPE-------L---------DGWNLYLVDWGYNTPKE 195 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~-------~---------aGi~~i~v~~G~~~~~~ 195 (218)
|+||||+.+|+.+| + + +|++++.+.++.....+
T Consensus 175 ~l~VGDs~~Di~aA----~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w~ 223 (258)
T 2i33_A 175 VLFFGDNLSDFTGF----DGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWE 223 (258)
T ss_dssp EEEEESSGGGSTTC----SSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHHH
T ss_pred eEEeCCCHHHhccc----ccCCHHHHHHHHHHHHHHhcCceEECCCCCcchhh
Confidence 99999999999999 5 3 79999999888554433
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=8.4e-12 Score=102.94 Aligned_cols=74 Identities=12% Similarity=0.114 Sum_probs=51.6
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|||+++..+....+.++++|++|||+. +|+.+| +++|+.+++|.+|...+.+.......+.+.+.++.|+.+.|
T Consensus 191 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a----~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l 265 (271)
T 2x4d_A 191 PSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGA----QRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLL 265 (271)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHH----HHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHH----HHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHH
Confidence 888844443333333455599999998 999999 99999999999995444332221223446777999987765
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=2.9e-10 Score=90.89 Aligned_cols=80 Identities=18% Similarity=0.175 Sum_probs=61.8
Q ss_pred HHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccc
Q 027798 95 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~ 174 (218)
.+.|+..|.+++|+||++...++..+++ +|+..+|+. ..|||++++.+....+.+|++|+||||+.+|+.+|
T Consensus 62 l~~L~~~g~~v~ivT~~~~~~~~~~l~~-lgl~~~~~~-----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a-- 133 (188)
T 2r8e_A 62 IRCALTSDIEVAIITGRKAKLVEDRCAT-LGITHLYQG-----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVM-- 133 (188)
T ss_dssp HHHHHTTTCEEEEECSSCCHHHHHHHHH-HTCCEEECS-----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHH--
T ss_pred HHHHHHCCCeEEEEeCCChHHHHHHHHH-cCCceeecC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH--
Confidence 4555555789999999999999999999 998766542 13899855544333334455599999999999999
Q ss_pred cccccCccEE
Q 027798 175 EPELDGWNLY 184 (218)
Q Consensus 175 ~~~~aGi~~i 184 (218)
+++|+.++
T Consensus 134 --~~ag~~~~ 141 (188)
T 2r8e_A 134 --EKVGLSVA 141 (188)
T ss_dssp --TTSSEEEE
T ss_pred --HHCCCEEE
Confidence 99999764
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.00 E-value=6.1e-12 Score=105.01 Aligned_cols=120 Identities=13% Similarity=0.116 Sum_probs=73.4
Q ss_pred CCcccHHHHHHhcC-CCEEEEeCCchHHHH---HHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCC
Q 027798 89 RLYPGVSDALKLAS-SRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 89 ~l~~gv~e~L~~L~-~~l~IvTn~~~~~~~---~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~ 156 (218)
..|+++.+.+..+. ....++||....... ..... .++..+|+.+++.+.. |||. +++.++.++
T Consensus 126 ~~~~~~~~~~~~l~~~~~~i~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~---- 200 (266)
T 3pdw_A 126 ITYEKFAVGCLAIRNGARFISTNGDIAIPTERGLLPGN-GSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDV---- 200 (266)
T ss_dssp CCHHHHHHHHHHHHTTCEEEESCCCCEEEETTEEEECH-HHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCG----
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCceeECCCceEecc-hHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCh----
Confidence 46777777776663 346677876642110 00001 1122344545554432 6776 555555544
Q ss_pred CceEEEcCc-hhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 157 LRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 157 ~e~l~IGDs-~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++++||||+ .+|+.+| +++|+.+++|.||++..+++......+.+.+.++.||.+.+
T Consensus 201 ~~~~~iGD~~~~Di~~~----~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~ 258 (266)
T 3pdw_A 201 SETLMVGDNYATDIMAG----INAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYI 258 (266)
T ss_dssp GGEEEEESCTTTHHHHH----HHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHH
T ss_pred hhEEEECCCcHHHHHHH----HHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHh
Confidence 459999999 7999999 99999999999999887776554323447777999998754
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=1e-10 Score=95.04 Aligned_cols=88 Identities=9% Similarity=-0.012 Sum_probs=76.2
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--ChHH----HHHHhhhcCCCCCCce
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVN----VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKPe----~l~~l~~~~~~~~~e~ 159 (218)
+.++||+.++|+.+. .+++|+||+++..++.+++. +++..+|+.+++++.. .| + .++.++.+++. |
T Consensus 67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~-ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~----~ 140 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADL-LDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSK----V 140 (195)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGG----E
T ss_pred EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCcccEEEEEEcccceecC-CceeeeHhHhCCChhH----E
Confidence 468999999999885 69999999999999999999 9999999999988765 44 3 67777766555 9
Q ss_pred EEEcCchhhHHhccccccccCccEEE
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
++|||+..++.++ .++||.+..
T Consensus 141 vivDDs~~~~~~~----~~ngi~i~~ 162 (195)
T 2hhl_A 141 IIVDNSPASYIFH----PENAVPVQS 162 (195)
T ss_dssp EEEESCGGGGTTC----GGGEEECCC
T ss_pred EEEECCHHHhhhC----ccCccEEee
Confidence 9999999999999 999998743
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=9.8e-10 Score=87.12 Aligned_cols=85 Identities=11% Similarity=0.092 Sum_probs=64.5
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchh
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLA 167 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~ 167 (218)
.+...++|+.| +.+++|+||++...+...+++ +|+..+|+. ..|||++++.+......+|++|+||||+.+
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~-lgl~~~~~~-----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~ 110 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIAD-LGIKLFFLG-----KLEKETACFDLMKQAGVTAEQTAYIGDDSV 110 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCEEEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHH-cCCceeecC-----CCCcHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 34556666665 679999999999999999999 999876632 138998554443333344555999999999
Q ss_pred hHHhccccccccCccEEE
Q 027798 168 TLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 168 Di~aA~~~~~~aGi~~i~ 185 (218)
|+.++ +++|+.++.
T Consensus 111 Di~~~----~~ag~~~~~ 124 (180)
T 1k1e_A 111 DLPAF----AACGTSFAV 124 (180)
T ss_dssp GHHHH----HHSSEEEEC
T ss_pred HHHHH----HHcCCeEEe
Confidence 99999 999997653
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.8e-10 Score=92.47 Aligned_cols=90 Identities=9% Similarity=0.040 Sum_probs=76.3
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--ChH---HHHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKV---NVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKP---e~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+.+. .+++|+||+++.+++.+++. ++...+|+.+++++.. .|. ..++.++.+++. |+
T Consensus 54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~-ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~----~v 128 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRR----VL 128 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGG----EE
T ss_pred EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHH-HCCCCcEEEEEeccCceecCCcEeccHHHhCCCcce----EE
Confidence 468999999999885 69999999999999999999 9999999999988765 331 166777765555 99
Q ss_pred EEcCchhhHHhccccccccCccEEEEeC
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLVDW 188 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v~~ 188 (218)
+|||+..++.++ .++||.+ ..|
T Consensus 129 ivdDs~~~~~~~----~~ngi~i--~~~ 150 (181)
T 2ght_A 129 ILDNSPASYVFH----PDNAVPV--ASW 150 (181)
T ss_dssp EECSCGGGGTTC----TTSBCCC--CCC
T ss_pred EEeCCHHHhccC----cCCEeEe--ccc
Confidence 999999999999 9999985 455
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.6e-10 Score=95.29 Aligned_cols=117 Identities=16% Similarity=0.163 Sum_probs=75.2
Q ss_pred CcccHHHHHHhcC-CCEEEEeCCchHHHH---HHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCCC
Q 027798 90 LYPGVSDALKLAS-SRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQGL 157 (218)
Q Consensus 90 l~~gv~e~L~~L~-~~l~IvTn~~~~~~~---~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~~ 157 (218)
.|+++.+.+..+. ....++||....... ..... .++..+|+.+++.+.. |+|+ ++++++++ |+
T Consensus 126 ~~~~~~~~~~~l~~~~~~i~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~----~~ 200 (264)
T 3epr_A 126 TYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGA-GSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIP----RN 200 (264)
T ss_dssp CHHHHHHHHHHHHTTCEEEESCCCSEEEETTEEEECH-HHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHTSC----GG
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCccccCCCceecCc-cHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhCcC----cc
Confidence 4666666666552 345677776531100 00000 1122345555555432 7776 55555554 45
Q ss_pred ceEEEcCc-hhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 158 RLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 158 e~l~IGDs-~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
+|+||||+ .+|+.+| +++|+++++|.||+++.+++......|.+.+.++.||.+
T Consensus 201 ~~~~vGD~~~~Di~~a----~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~~ 255 (264)
T 3epr_A 201 QAVMVGDNYLTDIMAG----INNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTF 255 (264)
T ss_dssp GEEEEESCTTTHHHHH----HHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCCS
T ss_pred cEEEECCCcHHHHHHH----HHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHhc
Confidence 59999999 6999999 999999999999999888776552334477779998864
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.83 E-value=2.7e-09 Score=88.75 Aligned_cols=71 Identities=20% Similarity=0.145 Sum_probs=55.2
Q ss_pred ChHH----HHHHhhhcCCCCCCceEEEcCc-hhhHHhccccccccCccEEEEeCCCCCHHHHH----hhcCCCceEEech
Q 027798 140 PKVN----VLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERA----EAASMPRIQLLQL 210 (218)
Q Consensus 140 pKPe----~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~----~~~~~~~i~~~~l 210 (218)
|||+ ++++++.+ +++|+||||+ .+|+.+| +++|+++++|.||+...+++. .....+.+.+.++
T Consensus 188 p~~~~~~~~~~~~~~~----~~~~~~vGD~~~~Di~~~----~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~ 259 (268)
T 3qgm_A 188 PSEVIMREALDILGLD----AKDVAVVGDQIDVDVAAG----KAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSL 259 (268)
T ss_dssp TSHHHHHHHHHHHTCC----GGGEEEEESCTTTHHHHH----HHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSH
T ss_pred CCHHHHHHHHHHhCCC----chhEEEECCCchHHHHHH----HHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCH
Confidence 7777 55555554 4559999999 5999999 999999999999998877665 3323344777799
Q ss_pred hhHhhhcC
Q 027798 211 SDFCTKLK 218 (218)
Q Consensus 211 ~el~~~~~ 218 (218)
.||.+.|+
T Consensus 260 ~el~~~l~ 267 (268)
T 3qgm_A 260 KDMVEALE 267 (268)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHHh
Confidence 99998874
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.78 E-value=3.8e-09 Score=89.19 Aligned_cols=108 Identities=15% Similarity=0.056 Sum_probs=76.3
Q ss_pred CCcccHHHHHHhc----CCCEEEEeCC---------------------chHHHHHHHHHhcCCCCCCCee----------
Q 027798 89 RLYPGVSDALKLA----SSRIYIVTSN---------------------QSRFVETLLRELAGVTITPDRL---------- 133 (218)
Q Consensus 89 ~l~~gv~e~L~~L----~~~l~IvTn~---------------------~~~~~~~~L~~~~gl~~~fd~i---------- 133 (218)
.+++++.++|+.+ +.++++.|++ ....+...++. +|+..+|..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEE-YGVSVNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHH-HTEEEEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHH-cCCCEEEEEccccccCCCCc
Confidence 5788999998877 6788999988 66788888998 9988777654
Q ss_pred EeCC---CC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceE
Q 027798 134 YGLG---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQ 206 (218)
Q Consensus 134 ~~~~---~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~ 206 (218)
++.+ .+ +||+++..+....+.++++|+||||+.+|+.++ +++|+ +|.+|...++.. . .+++++.
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~----~~ag~---~~~~~~~~~~~~-~-~a~~v~~ 268 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRML----QTVGN---GYLLKNATQEAK-N-LHNLITD 268 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH----TTSSE---EEECTTCCHHHH-H-HCCCBCS
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHH----HhCCc---EEEECCccHHHH-H-hCCEEcC
Confidence 3333 22 888854444333344455599999999999999 99994 455676655433 3 3454443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.74 E-value=7.4e-09 Score=82.03 Aligned_cols=77 Identities=9% Similarity=0.116 Sum_probs=57.9
Q ss_pred HHHHHhcCCCEEEEeCCchHHHHHHHH--HhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhc
Q 027798 95 SDALKLASSRIYIVTSNQSRFVETLLR--ELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 95 ~e~L~~L~~~l~IvTn~~~~~~~~~L~--~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
.+.|+..+++++|+||+ ..++..++ . +|+. + +.+. .+||+.+..+....+.+|++|+||||+.+|+.++
T Consensus 45 L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~-lgi~-~---~~g~--~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~ 115 (168)
T 3ewi_A 45 ISLLKKSGIEVRLISER--ACSKQTLSALK-LDCK-T---EVSV--SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECL 115 (168)
T ss_dssp HHHHHHTTCEEEEECSS--CCCHHHHHTTC-CCCC-E---ECSC--SCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHH
T ss_pred HHHHHHCCCEEEEEeCc--HHHHHHHHHhC-CCcE-E---EECC--CChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHH
Confidence 45666678899999999 67788899 5 5653 2 2232 2899866665555555666699999999999999
Q ss_pred cccccccCccEE
Q 027798 173 IKEPELDGWNLY 184 (218)
Q Consensus 173 ~~~~~~aGi~~i 184 (218)
+++|+.++
T Consensus 116 ----~~ag~~~a 123 (168)
T 3ewi_A 116 ----KRVGLSAV 123 (168)
T ss_dssp ----HHSSEEEE
T ss_pred ----HHCCCEEE
Confidence 99998743
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.65 E-value=4.3e-09 Score=89.23 Aligned_cols=99 Identities=15% Similarity=0.203 Sum_probs=75.1
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCch----HHHHHHHHHhcCCCCCCC-eeEeCCCC-ChHHHHHHhhhc-CCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQS----RFVETLLRELAGVTITPD-RLYGLGTG-PKVNVLKQLQKK-PEHQG 156 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~----~~~~~~L~~~~gl~~~fd-~i~~~~~~-pKPe~l~~l~~~-~~~~~ 156 (218)
...++||+.++|+.| |.+++|+||++. +.+...|++ +|+..+++ .++..... .|+...+.+... ...
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~Gy~i-- 175 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKR-LGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEI-- 175 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHH-HTCSCCSGGGEEEESSCSCCHHHHHHHHHTTEEE--
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHH-cCcCcccccceeccCCCCChHHHHHHHHhcCCCE--
Confidence 467999999999977 579999999965 588899999 99987773 55544333 787777766554 556
Q ss_pred CceEEEcCchhhHHhccc----cccccCccEEEEeCCC
Q 027798 157 LRLHFVEDRLATLKNVIK----EPELDGWNLYLVDWGY 190 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~----~~~~aGi~~i~v~~G~ 190 (218)
++||||..+|+.++-. .+|++++..+.+.||.
T Consensus 176 --v~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~ 211 (262)
T 3ocu_A 176 --VLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGK 211 (262)
T ss_dssp --EEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTT
T ss_pred --EEEECCChHHhccccccCCHHHHHHHHHHHHHHhCC
Confidence 9999999999998310 0177777777777774
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.1e-08 Score=86.64 Aligned_cols=100 Identities=16% Similarity=0.159 Sum_probs=74.5
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCch----HHHHHHHHHhcCCCCCCC-eeEeC-CCCChHHHHHHhhh-cCCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQS----RFVETLLRELAGVTITPD-RLYGL-GTGPKVNVLKQLQK-KPEHQG 156 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~----~~~~~~L~~~~gl~~~fd-~i~~~-~~~pKPe~l~~l~~-~~~~~~ 156 (218)
...++||+.++|+.| |.+++|+||++. +.+...|++ +|+..+++ .++.. +...|-...+.+.. ....
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy~i-- 175 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKR-LGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGYDI-- 175 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHH-HTCCCCSTTTEEEESSCSSSHHHHHHHHTTTCEE--
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHH-cCcCccccceeEecCCCCChHHHHHHHHhcCCCE--
Confidence 467999999999977 579999999965 588899999 99988775 44433 32266666666654 4556
Q ss_pred CceEEEcCchhhHHhccc----cccccCccEEEEeCCCC
Q 027798 157 LRLHFVEDRLATLKNVIK----EPELDGWNLYLVDWGYN 191 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~----~~~~aGi~~i~v~~G~~ 191 (218)
++||||+.+|+.++-. .+|++++..+.+.||..
T Consensus 176 --v~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~ 212 (260)
T 3pct_A 176 --VLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKK 212 (260)
T ss_dssp --EEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTT
T ss_pred --EEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCC
Confidence 9999999999998210 01778887777777753
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.21 E-value=2e-06 Score=81.28 Aligned_cols=111 Identities=18% Similarity=0.167 Sum_probs=82.8
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.++.|++.++|+.| |+++.++|+.+...++.+.+. +|+. .+++.-.. .|.++++.++.. +. ++|||
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~----~~~~~~~P~~K~~~v~~l~~~-~~----v~~vG 525 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKKLQAK-EV----VAFVG 525 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCTTCHHHHHHHHTTT-CC----EEEEE
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCC----EEEEeCCHHhHHHHHHHHhhC-Ce----EEEEe
Confidence 36889999999877 679999999999999999999 9985 34443333 788899998765 44 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+.||+.+. +.|| +++..|.++.. ....++.++.-.++..+.+.+
T Consensus 526 Dg~ND~~al----~~A~---vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~i 570 (645)
T 3j08_A 526 DGINDAPAL----AQAD---LGIAVGSGSDV--AVESGDIVLIRDDLRDVVAAI 570 (645)
T ss_dssp CSSSCHHHH----HHSS---EEEEECCCSCC--SSCCSSSEESSCCTTHHHHHH
T ss_pred CCHhHHHHH----HhCC---EEEEeCCCcHH--HHHhCCEEEecCCHHHHHHHH
Confidence 999999999 9999 56666644432 233455444335666665543
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=2.7e-06 Score=78.58 Aligned_cols=91 Identities=13% Similarity=0.214 Sum_probs=68.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcC-------------CCCCCCeeEeCCCCCh-----------
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAG-------------VTITPDRLYGLGTGPK----------- 141 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~g-------------l~~~fd~i~~~~~~pK----------- 141 (218)
..-|.+..+|+.| | ++.++||++..+++.+++.++| +.++||.|+.....|.
T Consensus 246 ~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~V 324 (555)
T 2jc9_A 246 VKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQV 324 (555)
T ss_dssp CCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEE
T ss_pred CCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEe
Confidence 3446777777766 6 9999999999999999998447 4579999665432211
Q ss_pred ---------------------------HHHHHHhhhcCCCCCCceEEEcCch-hhHHhcccccc-ccCccEEEEeC
Q 027798 142 ---------------------------VNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPE-LDGWNLYLVDW 188 (218)
Q Consensus 142 ---------------------------Pe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~-~aGi~~i~v~~ 188 (218)
-.+++.++.+.. +++||||.. .||..| + .+|+.+++|-.
T Consensus 325 d~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~----eVLYVGDhIftDIl~~----kk~~GWrTiLViP 392 (555)
T 2jc9_A 325 DTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGK----DILYIGDHIFGDILKS----KKRQGWRTFLVIP 392 (555)
T ss_dssp ETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGG----GEEEEESCCCCCCHHH----HHHHCCEEEEECT
T ss_pred ecCCCccccccccccccCCceeccCCHHHHHHHhCCCCC----eEEEECCEehHhHHhH----HhhcCeEEEEEEe
Confidence 125666666544 499999997 599999 7 89999999964
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=8.3e-07 Score=78.14 Aligned_cols=58 Identities=21% Similarity=0.232 Sum_probs=45.7
Q ss_pred CCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++++++||||+. +||.+| +++||++++|.+|+...++. .....+.+.+.++.|+.+.|
T Consensus 289 ~~~~~~~VGD~~~~Di~~A----~~aG~~ti~V~~G~~~~~~~-~~~~~pd~vi~~l~el~~~i 347 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGA----QNYGWNSCLVKTGVYNEGDD-LKECKPTLIVNDVFDAVTKT 347 (352)
T ss_dssp TSSEEEEEESCTTTHHHHH----HHHTCEEEECSSSSCCTTCC-CTTCCCSEECSSHHHHHHHH
T ss_pred CcceEEEEecCcHHHHHHH----HHcCCEEEEEccCCCCcccc-cccCCCCEEECCHHHHHHHH
Confidence 567899999999 599999 99999999999998765542 11233446777999998765
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.14 E-value=3.6e-06 Score=68.72 Aligned_cols=76 Identities=13% Similarity=0.109 Sum_probs=53.5
Q ss_pred EEEEe-CCchHHHHHHHHHhcCCCCCCCeeEeCCC-------C-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccc
Q 027798 105 IYIVT-SNQSRFVETLLRELAGVTITPDRLYGLGT-------G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 105 l~IvT-n~~~~~~~~~L~~~~gl~~~fd~i~~~~~-------~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~ 175 (218)
++++| +++.+.++.+++. ++ .+|+.+ +... + ||+.+++.+......+++++++|||+.+|+.++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~--- 185 (231)
T 1wr8_A 113 LVIMRETINVETVREIINE-LN--LNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAF--- 185 (231)
T ss_dssp EEECTTTSCHHHHHHHHHH-TT--CSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHH---
T ss_pred EEEECCCCCHHHHHHHHHh-cC--CcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH---
Confidence 47777 7788888888888 65 567766 3321 2 788855544333334455599999999999999
Q ss_pred ccccCccEEEEeCC
Q 027798 176 PELDGWNLYLVDWG 189 (218)
Q Consensus 176 ~~~aGi~~i~v~~G 189 (218)
+.+|+. +++.++
T Consensus 186 -~~ag~~-v~~~~~ 197 (231)
T 1wr8_A 186 -KVVGYK-VAVAQA 197 (231)
T ss_dssp -HHSSEE-EECTTS
T ss_pred -HHcCCe-EEecCC
Confidence 999986 445443
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.13 E-value=9.6e-06 Score=67.44 Aligned_cols=95 Identities=15% Similarity=0.073 Sum_probs=56.9
Q ss_pred ccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcC--CCCCCCeeEeCCC-------C-ChHHHHHHhhhcCCCCCCc
Q 027798 92 PGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGT-------G-PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 92 ~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~g--l~~~fd~i~~~~~-------~-pKPe~l~~l~~~~~~~~~e 158 (218)
.++.++++.+. .++.++++ .+..+.+.+. +. +...++.+.+... + +|+.+++.+....+.++++
T Consensus 139 ~~~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~ 215 (279)
T 4dw8_A 139 RETNDFLTDITLPVAKCLIVGD--AGKLIPVESE-LCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREE 215 (279)
T ss_dssp EECSCHHHHSCSCCSCEEEESC--HHHHHHHHHH-HHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGG
T ss_pred ccHHHHHHhhcCCceEEEEeCC--HHHHHHHHHH-HHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHH
Confidence 34444444442 36655543 2333334333 22 3345666655421 1 7888555554444445556
Q ss_pred eEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHH
Q 027798 159 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
+++|||+.+|+.++ +.|| ++|.+|.+.++.+
T Consensus 216 ~i~~GD~~NDi~m~----~~ag---~~vam~na~~~~k 246 (279)
T 4dw8_A 216 VIAIGDGYNDLSMI----KFAG---MGVAMGNAQEPVK 246 (279)
T ss_dssp EEEEECSGGGHHHH----HHSS---EEEECTTSCHHHH
T ss_pred EEEECCChhhHHHH----HHcC---cEEEcCCCcHHHH
Confidence 99999999999999 9999 5677887766544
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.00 E-value=1e-05 Score=67.46 Aligned_cols=81 Identities=9% Similarity=0.089 Sum_probs=54.1
Q ss_pred CEEEEeCCchHHHHHHHHHhcC--CCCCCCeeEeCC-------CC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcc
Q 027798 104 RIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 173 (218)
Q Consensus 104 ~l~IvTn~~~~~~~~~L~~~~g--l~~~fd~i~~~~-------~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~ 173 (218)
+++++|++.. .+.+++. ++ +..+|+.+.+.. .+ +|+++++.+....+.++++|++|||+.+|+.++
T Consensus 148 ki~i~~~~~~--~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~- 223 (271)
T 1rlm_A 148 KFSLNLPDEQ--IPLVIDK-LHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEML- 223 (271)
T ss_dssp EEEEECCGGG--HHHHHHH-HHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-
T ss_pred EEEEEcCHHH--HHHHHHH-HHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHH-
Confidence 7788887653 4555555 44 566777776652 12 888855555444444555699999999999999
Q ss_pred ccccccCccEEEEeCCCCCHH
Q 027798 174 KEPELDGWNLYLVDWGYNTPK 194 (218)
Q Consensus 174 ~~~~~aGi~~i~v~~G~~~~~ 194 (218)
+.+|+. +..|...++
T Consensus 224 ---~~ag~~---va~~na~~~ 238 (271)
T 1rlm_A 224 ---KMARYS---FAMGNAAEN 238 (271)
T ss_dssp ---HHCSEE---EECTTCCHH
T ss_pred ---HHcCCe---EEeCCccHH
Confidence 999983 335555443
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.99 E-value=1.5e-05 Score=65.94 Aligned_cols=66 Identities=9% Similarity=-0.030 Sum_probs=43.4
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhh--Hhhh
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD--FCTK 216 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~e--l~~~ 216 (218)
+||.+++.+....+.++++|++|||+.+|+.++ +.+|+ +|.+|...++ +. ..++ +.+.+..+ +.+.
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~----~~ag~---~v~~~n~~~~-~~-~~a~--~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISML----RHAAI---GVAMGQAKED-VK-AAAD--YVTAPIDEDGISKA 254 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH----HHSSE---EEECTTSCHH-HH-HHSS--EECCCGGGTHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH----HHcCc---eEEecCccHH-HH-hhCC--EEeccCchhhHHHH
Confidence 888855554433344555599999999999999 99998 3456765543 33 3445 44456666 5443
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.95 E-value=1.6e-05 Score=65.66 Aligned_cols=81 Identities=7% Similarity=-0.014 Sum_probs=53.8
Q ss_pred CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC---------CC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcc
Q 027798 104 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 173 (218)
Q Consensus 104 ~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~---------~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~ 173 (218)
++.+ + ++......+++. ++. .|+.+.+.. .+ +|+.+++.+....+.+++++++|||+.+|+.++
T Consensus 159 ki~~-~-~~~~~~~~~~~~-l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~- 232 (274)
T 3fzq_A 159 KICL-W-SNEKVFDEVKDI-LQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMF- 232 (274)
T ss_dssp EEEE-E-CCHHHHHHHHHH-HGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHH-
T ss_pred EEEE-E-cCHHHHHHHHHH-hhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHH-
Confidence 4444 4 666777777777 653 255555443 11 788755444433344555599999999999999
Q ss_pred ccccccCccEEEEeCCCCCHHHH
Q 027798 174 KEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 174 ~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
+.|| ++|.+|...++.+
T Consensus 233 ---~~ag---~~vam~na~~~~k 249 (274)
T 3fzq_A 233 ---QASD---VTIAMKNSHQQLK 249 (274)
T ss_dssp ---HTCS---EEEEETTSCHHHH
T ss_pred ---HhcC---ceEEecCccHHHH
Confidence 9999 5677887766543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=97.92 E-value=2.3e-05 Score=65.74 Aligned_cols=83 Identities=7% Similarity=-0.041 Sum_probs=52.8
Q ss_pred CCEEEE-eCCc-hHHHHHHHHHhcCCCCCCCeeEeCCCC--------ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhc
Q 027798 103 SRIYIV-TSNQ-SRFVETLLRELAGVTITPDRLYGLGTG--------PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 103 ~~l~Iv-Tn~~-~~~~~~~L~~~~gl~~~fd~i~~~~~~--------pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
.++.++ ++.. ....+.+.+. ++ ..+..+.+.... +|+.+++.+....+.+++++++|||+.+|+.++
T Consensus 167 ~ki~i~~~~~~~~~~~~~l~~~-~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml 243 (283)
T 3dao_A 167 IKFTVFHPDKCEELCTPVFIPA-WN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEML 243 (283)
T ss_dssp CEEEEECSSCHHHHHTTTHHHH-HT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH
T ss_pred eEEEEEcChHHHHHHHHHHHHH-hc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 377777 3333 3334455555 54 345555554321 688866666555555666699999999999999
Q ss_pred cccccccCccEEEEeCCCCCHHH
Q 027798 173 IKEPELDGWNLYLVDWGYNTPKE 195 (218)
Q Consensus 173 ~~~~~~aGi~~i~v~~G~~~~~~ 195 (218)
+.+|+ +|..|.+.++.
T Consensus 244 ----~~ag~---~vam~na~~~~ 259 (283)
T 3dao_A 244 ----QNAGI---SYAVSNARQEV 259 (283)
T ss_dssp ----HHSSE---EEEETTSCHHH
T ss_pred ----HhCCC---EEEcCCCCHHH
Confidence 99994 44556555543
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=97.92 E-value=9e-05 Score=62.74 Aligned_cols=95 Identities=15% Similarity=0.131 Sum_probs=65.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-----C------------C-ChHH--
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----T------------G-PKVN-- 143 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-----~------------~-pKPe-- 143 (218)
..++.||+.++++.| +.+++|+|+.....++.+++. +|+......|++.. . . .|+.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~-~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHH-TTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHH-cCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 467999999999887 579999999999999999999 99865444444321 0 0 2333
Q ss_pred ----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 144 ----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 144 ----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
....+... ...++||||+.+|+-|+ +...-.-+++..||
T Consensus 218 ~k~~~~~~~~~~----~~~v~~vGDGiNDa~m~----k~l~~advgiaiGf 260 (297)
T 4fe3_A 218 LKNTDYFSQLKD----NSNIILLGDSQGDLRMA----DGVANVEHILKIGY 260 (297)
T ss_dssp HTCHHHHHHTTT----CCEEEEEESSGGGGGTT----TTCSCCSEEEEEEE
T ss_pred HHHHHHHHhhcc----CCEEEEEeCcHHHHHHH----hCccccCeEEEEEe
Confidence 22223222 33499999999999998 64433334455554
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.87 E-value=2e-05 Score=75.42 Aligned_cols=110 Identities=18% Similarity=0.160 Sum_probs=80.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.++.|++.++++.| |+++.++|+.+...+..+.+. +|+. .+++.-.. .|.++++.++.. +. ++|||
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~----~~~~~~~P~~K~~~v~~l~~~-~~----v~~vG 603 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKKLQAK-EV----VAFVG 603 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCTTCHHHHHHHHTTT-CC----EEEEE
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCc----EEEccCCHHHHHHHHHHHhcC-Ce----EEEEE
Confidence 36889999998877 679999999999999999999 9985 44444333 788899998765 44 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
|+.||+.+- +.|| +++..|.++.. ....+|.++.-.++..+.+.
T Consensus 604 Dg~ND~~al----~~A~---vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~ 647 (723)
T 3j09_A 604 DGINDAPAL----AQAD---LGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA 647 (723)
T ss_dssp CSSTTHHHH----HHSS---EEEECCCCSCC--SSCCSSEECSSCCTTHHHHH
T ss_pred CChhhHHHH----hhCC---EEEEeCCCcHH--HHHhCCEEEeCCCHHHHHHH
Confidence 999999999 9999 45666644332 22344433322466665544
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.83 E-value=3.8e-05 Score=64.10 Aligned_cols=98 Identities=16% Similarity=0.116 Sum_probs=60.6
Q ss_pred CCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-------C-ChHHHHHHhhhcCCCCCC
Q 027798 89 RLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------G-PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 89 ~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-------~-pKPe~l~~l~~~~~~~~~ 157 (218)
.+++++.++++.+. .++. +++.. +....+++.+.+....+..+.+... + +|+.+++.+....+.+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~ki~-~~~~~-~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~ 219 (290)
T 3dnp_A 142 QFVESLSDLLMDEPVSAPVIE-VYTEH-DIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMD 219 (290)
T ss_dssp EECSCHHHHHHHSCCCCSEEE-EECCG-GGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGG
T ss_pred cccCCHHHHHhcCCCCceEEE-EeCCH-HHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHH
Confidence 35678888888764 3564 44433 3334444431122334555554321 1 688866666555555666
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHH
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKE 195 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~ 195 (218)
+|++|||+.+|+.++ +.||+ +|..|...++.
T Consensus 220 ~~i~~GD~~NDi~m~----~~ag~---~vam~na~~~~ 250 (290)
T 3dnp_A 220 DVVAIGHQYDDLPMI----ELAGL---GVAMGNAVPEI 250 (290)
T ss_dssp GEEEEECSGGGHHHH----HHSSE---EEECTTSCHHH
T ss_pred HEEEECCchhhHHHH----HhcCC---EEEecCCcHHH
Confidence 699999999999999 99996 45566665543
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00012 Score=59.83 Aligned_cols=104 Identities=12% Similarity=0.023 Sum_probs=69.8
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC---------C---CeeE-------------------
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT---------P---DRLY------------------- 134 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~---------f---d~i~------------------- 134 (218)
.+-|.+.++|++| |.+++|+|+.+...+...++. +|+..+ + ..++
T Consensus 22 ~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~ 100 (227)
T 1l6r_A 22 LISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIF-LGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 100 (227)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHH-hCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHh
Confidence 3556677777766 578999999999988888888 887541 1 1111
Q ss_pred ---------------------------------------eC-------CCC-ChHHHHHHhhhcCCCCCCceEEEcCchh
Q 027798 135 ---------------------------------------GL-------GTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLA 167 (218)
Q Consensus 135 ---------------------------------------~~-------~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~ 167 (218)
++ ..+ +|+.+++.+....+.+++++++|||+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~n 180 (227)
T 1l6r_A 101 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 180 (227)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred cCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHH
Confidence 00 011 7888666665555556667999999999
Q ss_pred hHHhccccccccCccEEEEeCCCCCHHHHHhhcCC
Q 027798 168 TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASM 202 (218)
Q Consensus 168 Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~ 202 (218)
|+.++ +.+|+. +++ |...+ +++. .++
T Consensus 181 D~~m~----~~ag~~-va~--~n~~~-~~k~-~a~ 206 (227)
T 1l6r_A 181 DMPMF----QLPVRK-ACP--ANATD-NIKA-VSD 206 (227)
T ss_dssp GHHHH----TSSSEE-EEC--TTSCH-HHHH-HCS
T ss_pred hHHHH----HHcCce-EEe--cCchH-HHHH-hCC
Confidence 99999 999984 444 44444 3433 344
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.80 E-value=3e-05 Score=65.02 Aligned_cols=51 Identities=10% Similarity=-0.026 Sum_probs=39.3
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHH
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERA 197 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~ 197 (218)
+|+.+++.+....+.+++++++|||+.+|+.++ +.|| ++|..|.+.++.+.
T Consensus 209 ~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml----~~ag---~~vAm~Na~~~vk~ 259 (285)
T 3pgv_A 209 SKGHALEAVAKMLGYTLSDCIAFGDGMNDAEML----SMAG---KGCIMANAHQRLKD 259 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH----HHSS---EEEECTTSCHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHH----HhcC---CEEEccCCCHHHHH
Confidence 688877666555556666799999999999999 9999 46677777665443
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=97.79 E-value=4.1e-05 Score=64.85 Aligned_cols=82 Identities=11% Similarity=-0.025 Sum_probs=52.0
Q ss_pred CEEEEeCCchHHHHHHHHHhcC--CCC-CCCeeEeCCCC--------ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhc
Q 027798 104 RIYIVTSNQSRFVETLLRELAG--VTI-TPDRLYGLGTG--------PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 104 ~l~IvTn~~~~~~~~~L~~~~g--l~~-~fd~i~~~~~~--------pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
++.+.+ .. ...+.+++. +. +.. .|+.+.+.... +|+.+++.+....+.+++++++|||+.+|+.++
T Consensus 184 ki~~~~-~~-~~~~~~~~~-l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~ 260 (304)
T 3l7y_A 184 KLTLQV-KE-EESAQIMKA-IADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEML 260 (304)
T ss_dssp EEEEEC-CG-GGHHHHHHH-HHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH
T ss_pred EEEEEc-CH-HHHHHHHHH-HHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHH
Confidence 444544 32 334455554 32 444 46655554321 677766666555555666699999999999999
Q ss_pred cccccccCccEEEEeCCCCCHHH
Q 027798 173 IKEPELDGWNLYLVDWGYNTPKE 195 (218)
Q Consensus 173 ~~~~~~aGi~~i~v~~G~~~~~~ 195 (218)
+.||+ +|.+|...++.
T Consensus 261 ----~~ag~---~vam~na~~~~ 276 (304)
T 3l7y_A 261 ----KLAKY---SYAMANAPKNV 276 (304)
T ss_dssp ----HHCTE---EEECTTSCHHH
T ss_pred ----HhcCC---eEEcCCcCHHH
Confidence 99994 56667666553
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.68 E-value=9.9e-05 Score=72.89 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=79.6
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCe---------------------------eEeCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDR---------------------------LYGLGT 138 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~---------------------------i~~~~~ 138 (218)
++.|++.++++.| |+++.++|+.....+..+.+. +|+....+. +++.-.
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~-lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~ 681 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 681 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence 6789999999877 679999999999999999999 999754321 333222
Q ss_pred C-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 139 G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 139 ~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
. .|-.+++.++...+. +.||||+.||+.+- ++|++ .+++ |-++.. ....++.++.-.++..+.+.+
T Consensus 682 P~~K~~~v~~l~~~g~~----v~~~GDG~ND~~al----k~Adv-giam--g~g~~~--ak~aAd~vl~~~~~~~i~~~i 748 (995)
T 3ar4_A 682 PSHKSKIVEYLQSYDEI----TAMTGDGVNDAPAL----KKAEI-GIAM--GSGTAV--AKTASEMVLADDNFSTIVAAV 748 (995)
T ss_dssp SSHHHHHHHHHHTTTCC----EEEEECSGGGHHHH----HHSTE-EEEE--TTSCHH--HHHTCSEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCE----EEEEcCCchhHHHH----HHCCe-EEEe--CCCCHH--HHHhCCEEECCCCHHHHHHHH
Confidence 2 455688888765444 99999999999999 99998 3334 333332 223455333223566665543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.64 E-value=8.7e-05 Score=71.15 Aligned_cols=110 Identities=11% Similarity=0.096 Sum_probs=79.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.++-|++.++|+.| |+++.++|+.+...++.+.+. +|+.. +++.-.. .|.++++.++.+.+. +.|||
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~-lgi~~----v~a~~~P~~K~~~v~~l~~~g~~----V~~vG 623 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGT-LGIKK----VVAEIMPEDKSRIVSELKDKGLI----VAMAG 623 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH-HTCCC----EECSCCHHHHHHHHHHHHHHSCC----EEEEE
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCE----EEEecCHHHHHHHHHHHHhcCCE----EEEEE
Confidence 35778999998877 679999999999999999999 99864 3433222 556688888876666 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
|+.||+.+- +.||+ ++.-|.++... ...++.++.-.++..+.+
T Consensus 624 DG~ND~paL----~~Adv---GIAmg~g~d~a--~~~AD~vl~~~~~~~i~~ 666 (736)
T 3rfu_A 624 DGVNDAPAL----AKADI---GIAMGTGTDVA--IESAGVTLLHGDLRGIAK 666 (736)
T ss_dssp CSSTTHHHH----HHSSE---EEEESSSCSHH--HHHCSEEECSCCSTTHHH
T ss_pred CChHhHHHH----HhCCE---EEEeCCccHHH--HHhCCEEEccCCHHHHHH
Confidence 999999999 99995 44444444332 234554443345555544
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.63 E-value=2.1e-05 Score=65.41 Aligned_cols=79 Identities=11% Similarity=0.005 Sum_probs=47.2
Q ss_pred eCCchHHHHHHHHHhcC--CCCCCCeeEeCCCC--------ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccc
Q 027798 109 TSNQSRFVETLLRELAG--VTITPDRLYGLGTG--------PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 178 (218)
Q Consensus 109 Tn~~~~~~~~~L~~~~g--l~~~fd~i~~~~~~--------pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~ 178 (218)
...+....+..++. +. +...+..+.+.... +|+.+++.+....+.+++++++|||+.+|++++ +.
T Consensus 157 ~~~~~~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~----~~ 231 (279)
T 3mpo_A 157 FVDYPQVIEQVKAN-MPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMI----KY 231 (279)
T ss_dssp EECCHHHHHHHHHH-CCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHH----HH
T ss_pred EcCCHHHHHHHHHH-HHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHH----Hh
Confidence 33455666666666 43 22234444443321 589866666555555666699999999999999 99
Q ss_pred cCccEEEEeCCCCCHHH
Q 027798 179 DGWNLYLVDWGYNTPKE 195 (218)
Q Consensus 179 aGi~~i~v~~G~~~~~~ 195 (218)
||+ +|.+|.+.++.
T Consensus 232 ag~---~vam~na~~~~ 245 (279)
T 3mpo_A 232 AGL---GVAMGNAIDEV 245 (279)
T ss_dssp STE---ECBC---CCHH
T ss_pred cCc---eeeccCCCHHH
Confidence 994 56777665543
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00015 Score=60.33 Aligned_cols=55 Identities=22% Similarity=0.100 Sum_probs=38.3
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMP 203 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~ 203 (218)
+|+.+++.+....+.++++|++|||+.+|+.++ +.+|+ ++.+|...++ ++.. ++.
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~----~~ag~---~v~~~n~~~~-~~~~-a~~ 244 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMF----EEAGL---RVAMENAIEK-VKEA-SDI 244 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHH----TTCSE---EEECTTSCHH-HHHH-CSE
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHH----HHcCC---EEEecCCCHH-HHhh-CCE
Confidence 788855555444444555699999999999999 99998 4567765543 4333 453
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00016 Score=65.84 Aligned_cols=90 Identities=19% Similarity=0.230 Sum_probs=65.8
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhc--------CCCCCCCeeEeCCCCC-------------------
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELA--------GVTITPDRLYGLGTGP------------------- 140 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~--------gl~~~fd~i~~~~~~p------------------- 140 (218)
-|.+...|+.| |.++.++||++-.+++..++..+ .+.++||.|++....|
T Consensus 188 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l 267 (470)
T 4g63_A 188 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTM 267 (470)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCCE
T ss_pred CHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCcc
Confidence 46777777776 56899999999999999998756 4678999998754211
Q ss_pred -------hHH---------HHHHhhhcCCCCCCceEEEcCchh-hHHhccccccccCccEEEEe
Q 027798 141 -------KVN---------VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 141 -------KPe---------~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~~~~~~aGi~~i~v~ 187 (218)
+|. ..+.++. ...+++||||+.. ||..+ + +..|+.+++|-
T Consensus 268 ~~~~~~~~~~vY~gGn~~~l~~llg~----~g~~VLY~GDhi~~Di~~~-k--k~~gWrT~~Ii 324 (470)
T 4g63_A 268 TNVHGPIVPGVYQGGNAKKFTEDLGV----GGDEILYIGDHIYGDILRL-K--KDCNWRTALVV 324 (470)
T ss_dssp EECCSSCCSEEEEECCHHHHHHHTTC----CGGGEEEEESCCCSCHHHH-H--HSCCCEEEEEC
T ss_pred cccccccCCceeecCcHHHHHHHhCC----CCCeEEEECCchHHHHHhh-h--hccCCeEEEEh
Confidence 010 3334443 3445999999985 98877 1 46799999996
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.40 E-value=4.7e-05 Score=62.05 Aligned_cols=89 Identities=12% Similarity=0.034 Sum_probs=69.6
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCC-CCCCeeEeCCCC-ChHH----HHHHhhhcCCCCCCce
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVT-ITPDRLYGLGTG-PKVN----VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~-~~fd~i~~~~~~-pKPe----~l~~l~~~~~~~~~e~ 159 (218)
+...||+.++|+.+. ..++|.|++.+.+++.+++. ++.. .+|+.++..+.. .++. .+..++.++ ++|
T Consensus 58 v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~-LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl----~~v 132 (204)
T 3qle_A 58 TAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEK-LDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDL----SKV 132 (204)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-TSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCG----GGE
T ss_pred EEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCeEEEEEEecceeEECCeeeecHHHhCCCh----HHE
Confidence 467899999999995 49999999999999999999 9987 589988776543 2222 455555544 449
Q ss_pred EEEcCchhhHHhccccccccCccEEE
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
++|+|++...... ..+||.+..
T Consensus 133 IiIDDsp~~~~~~----p~N~I~I~~ 154 (204)
T 3qle_A 133 IIIDTDPNSYKLQ----PENAIPMEP 154 (204)
T ss_dssp EEEESCTTTTTTC----GGGEEECCC
T ss_pred EEEECCHHHHhhC----ccCceEeee
Confidence 9999999988877 777876643
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00024 Score=63.06 Aligned_cols=113 Identities=14% Similarity=0.176 Sum_probs=75.0
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHhHh------------------hhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHH
Q 027798 58 WSENREALIELSGKVRDEWMDTDFT------------------TWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFV 116 (218)
Q Consensus 58 ~g~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~ 116 (218)
.|++.+++........+........ .+....++|||+.++++.| |.+++|||++....+
T Consensus 172 ~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v 251 (385)
T 4gxt_A 172 KNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIV 251 (385)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHH
T ss_pred cCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHH
Confidence 4678888777776665543211100 0111234799999999987 679999999999999
Q ss_pred HHHHHHhcCCCCC--CCeeEeCC-----CC----------------ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhc
Q 027798 117 ETLLRELAGVTIT--PDRLYGLG-----TG----------------PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 117 ~~~L~~~~gl~~~--fd~i~~~~-----~~----------------pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
+.+.+. +|+..- .+.|+|.. ++ .|+.+++++... +.....++++|||.+|+.+-
T Consensus 252 ~~ia~~-lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML 328 (385)
T 4gxt_A 252 RAFATD-TNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAML 328 (385)
T ss_dssp HHHHHC-TTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHH
T ss_pred HHHHHH-hCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHH
Confidence 999998 876422 24455421 11 367788776432 22233489999999999997
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00042 Score=57.01 Aligned_cols=48 Identities=15% Similarity=0.043 Sum_probs=36.9
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHH
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 194 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~ 194 (218)
+|+.+++.+....+.+++++++|||+.+|+.++ +.||+ +|..|.+.++
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~----~~ag~---~vam~na~~~ 241 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPML----KAAGI---GVAMGNASEK 241 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH----HHSSE---EEECTTSCHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHH----HhCCC---eEEeCCCcHH
Confidence 788866666555556666799999999999999 99995 4666766554
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0015 Score=54.63 Aligned_cols=45 Identities=22% Similarity=0.068 Sum_probs=35.1
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
+|..+++.+....+.++++|++|||+.+|+.++ +.+|+ ++++.++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~----~~ag~-~va~~~~ 260 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSML----EAAGK-GVAMGNA 260 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHH----HHSSE-EEECTTC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH----HHcCc-EEEEcCC
Confidence 788766665555555666699999999999999 99999 6677544
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00082 Score=56.25 Aligned_cols=55 Identities=15% Similarity=0.033 Sum_probs=37.4
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMP 203 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~ 203 (218)
+|+.+++.+....+.+++++++|||+.+|+.++ +.+|+ ++ ..|...+ ++.. .++.
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~----~~ag~-~v--a~~n~~~-~~~~-~a~~ 252 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMI----EYAGV-GV--AVDNAIP-SVKE-VANF 252 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH----HHSSE-EE--ECTTSCH-HHHH-HCSE
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHH----HHCCc-EE--EecCCcH-HHHh-hCCE
Confidence 788866665444444555699999999999999 99997 34 4454444 3433 3453
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0035 Score=61.50 Aligned_cols=114 Identities=13% Similarity=0.029 Sum_probs=77.1
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC-C------------------------eeEeCCCC-
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP-D------------------------RLYGLGTG- 139 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f-d------------------------~i~~~~~~- 139 (218)
++-|++.++++.| |+++.++|+.....+..+-+. +||.... + .|++.-..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~-lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQ-LGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ 613 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHH-HTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHH-cCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence 5778999998877 689999999999999999999 9996321 0 12332221
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
.|-.+++.+....+. +.|+||+.||.-|= ++|++ .|++ |-++.. ....++.++.-.++..+.+.
T Consensus 614 ~K~~iV~~Lq~~g~~----Vam~GDGvNDapaL----k~Adv-GIAm--g~gtd~--ak~aADiVl~~~~~~~I~~a 677 (920)
T 1mhs_A 614 HKYNVVEILQQRGYL----VAMTGDGVNDAPSL----KKADT-GIAV--EGSSDA--ARSAADIVFLAPGLGAIIDA 677 (920)
T ss_dssp HHHHHHHHHHTTTCC----CEECCCCGGGHHHH----HHSSE-EEEE--TTSCHH--HHHSSSEEESSCCSHHHHHH
T ss_pred HHHHHHHHHHhCCCe----EEEEcCCcccHHHH----HhCCc-Cccc--ccccHH--HHHhcCeEEcCCCHHHHHHH
Confidence 455588888765444 99999999999999 99997 3444 333432 22345533333355555443
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0044 Score=52.47 Aligned_cols=47 Identities=13% Similarity=0.034 Sum_probs=35.6
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
+|+.+++.+....+.+++++++|||+.+|+.++ +.+|+. ++ .|.+.+
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~----~~ag~~-va--~~na~~ 270 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAML----SNFKYS-FA--VANATD 270 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH----HSCSEE-EE--CTTCCH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH----HHcCCe-EE--EcCCcH
Confidence 788877776555555666799999999999999 999983 44 444444
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0013 Score=53.91 Aligned_cols=55 Identities=13% Similarity=0.088 Sum_probs=36.5
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMP 203 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~ 203 (218)
.|..+++.+....+.++++|++|||+.+|+.++ +.||+.+ ..|...+ +++. .++.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml----~~ag~~v---am~na~~-~~k~-~A~~ 237 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEML----SFVGTGV---AMGNAHE-EVKR-VADF 237 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHH----HHSSEEE---EETTCCH-HHHH-TCSE
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHH----HhCCcEE---EeCCCcH-HHHH-hCCE
Confidence 787755554443344555599999999999999 9999843 3464444 4443 3553
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0044 Score=61.41 Aligned_cols=85 Identities=11% Similarity=0.160 Sum_probs=63.7
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC------------------------C----------
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP------------------------D---------- 131 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f------------------------d---------- 131 (218)
++-|++.++++.| |+++.++|+.....+..+.+. +|+...- .
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 5679999998877 679999999999999999999 9986320 0
Q ss_pred ---------------eeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCcc
Q 027798 132 ---------------RLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 132 ---------------~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
.+++.-.. .|-.+++.++...+. +.||||+.||+.|= +.|++-
T Consensus 678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~----V~~iGDG~ND~paL----k~AdvG 736 (1028)
T 2zxe_A 678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAI----VAVTGDGVNDSPAL----KKADIG 736 (1028)
T ss_dssp CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCC----EEEEECSGGGHHHH----HHSSEE
T ss_pred CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCE----EEEEcCCcchHHHH----HhCCce
Confidence 12332221 233477777665445 99999999999999 999973
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.00079 Score=56.27 Aligned_cols=53 Identities=11% Similarity=-0.065 Sum_probs=35.0
Q ss_pred ChHHHHHHhhhcCC-CCCCc--eEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHH
Q 027798 140 PKVNVLKQLQKKPE-HQGLR--LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERA 197 (218)
Q Consensus 140 pKPe~l~~l~~~~~-~~~~e--~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~ 197 (218)
+|+.+++.+....+ .++++ +++|||+.+|+.+. +.+|+ ++++.++....+++.
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~----~~ag~-~va~~n~~~~~~~~~ 244 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLL----EVMDY-AVIVKGLNREGVHLH 244 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHH----HTSSE-EEECCCCC-------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHH----HhCCc-eEEecCCCccchhhc
Confidence 78885555544333 34566 99999999999999 99998 577777664344443
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0028 Score=51.94 Aligned_cols=51 Identities=16% Similarity=0.020 Sum_probs=37.3
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHh
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 198 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~ 198 (218)
+|+.+++.+....+.+++++++|||+.+|+.+. +.+|+ +++ .|...+ +++.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~----~~~g~-~va--~~na~~-~~k~ 212 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLF----ETSAR-GVI--VRNAQP-ELLH 212 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH----TSSSE-EEE--CTTCCH-HHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHH----hccCc-EEE--EcCCcH-HHHH
Confidence 888876666655555666799999999999999 99887 344 455544 4444
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0013 Score=54.13 Aligned_cols=66 Identities=15% Similarity=-0.012 Sum_probs=44.2
Q ss_pred chHHHHHHHHHhcCCCCCCCeeEeCCC------CChHHHHHHhhhcCCCCC--CceEEEcCchhhHHhccccccccCccE
Q 027798 112 QSRFVETLLRELAGVTITPDRLYGLGT------GPKVNVLKQLQKKPEHQG--LRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 112 ~~~~~~~~L~~~~gl~~~fd~i~~~~~------~pKPe~l~~l~~~~~~~~--~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
....+...+.. .+ |+.+.+... .+|+.+++.+......++ +++++|||+.+|+.++ +.+|+.
T Consensus 147 ~~~~~~~~l~~-~~----~~~~~s~~~~ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~----~~ag~~- 216 (259)
T 3zx4_A 147 EVEAVLEALEA-VG----LEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLF----RAVDLA- 216 (259)
T ss_dssp THHHHHHHHHH-TT----CEEEECSSSEEEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHH----HTSSEE-
T ss_pred HHHHHHHHHHH-CC----cEEEecCceEEEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHH----HhCCCe-
Confidence 44555566665 44 344443311 277887777665555555 6799999999999999 999974
Q ss_pred EEEe
Q 027798 184 YLVD 187 (218)
Q Consensus 184 i~v~ 187 (218)
+++.
T Consensus 217 va~~ 220 (259)
T 3zx4_A 217 VYVG 220 (259)
T ss_dssp EECS
T ss_pred EEeC
Confidence 4444
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.00094 Score=57.34 Aligned_cols=38 Identities=11% Similarity=0.262 Sum_probs=30.7
Q ss_pred CCCcccHHHHHHhc--CCCEEEEeCCchHHHHHHHHHhcCC
Q 027798 88 NRLYPGVSDALKLA--SSRIYIVTSNQSRFVETLLRELAGV 126 (218)
Q Consensus 88 ~~l~~gv~e~L~~L--~~~l~IvTn~~~~~~~~~L~~~~gl 126 (218)
..+++++.++|+.+ +.+++|+|++....+...++. +++
T Consensus 102 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~-~~~ 141 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASM-IGV 141 (332)
T ss_dssp CCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTC
T ss_pred CCCHHHHHHHHHHHHcCCcEEEEECCceEEEcccchh-hhh
Confidence 46789999988866 568899999988888777777 666
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.011 Score=58.54 Aligned_cols=84 Identities=12% Similarity=0.157 Sum_probs=61.4
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC-----------------------------------
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP----------------------------------- 130 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f----------------------------------- 130 (218)
++-|++.++++.+ |+++.++|+.+...+..+.+. +|+...-
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 682 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAAS-VGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD 682 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence 5778999998877 679999999999999999999 9984210
Q ss_pred --------------CeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCc
Q 027798 131 --------------DRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 131 --------------d~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi 181 (218)
..+++.... .|-.+.+.+....+. +.|+||+.||+.+= +.||+
T Consensus 683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~----V~a~GDG~ND~~mL----k~A~v 740 (1034)
T 3ixz_A 683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAI----VAVTGDGVNDSPAL----KKADI 740 (1034)
T ss_pred CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCE----EEEECCcHHhHHHH----HHCCe
Confidence 012222111 233366666654444 99999999999999 99996
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0021 Score=56.81 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=59.0
Q ss_pred cCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCC-CCC-eeEeCCCCCh--HHHHHHh-hhcCCCCCCce
Q 027798 87 ANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTI-TPD-RLYGLGTGPK--VNVLKQL-QKKPEHQGLRL 159 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~-~fd-~i~~~~~~pK--Pe~l~~l-~~~~~~~~~e~ 159 (218)
.+.+.||+.++|+.+. ..++|.|++.+.+++.+++. ++... +|+ .+++.+..+. -..|..+ +.++ +++
T Consensus 73 ~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~-LDp~~~~f~~ri~sr~~~g~~~~KdL~~L~~~dl----~~v 147 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDT----SMV 147 (372)
T ss_dssp EEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HCTTSCSSSSCEECTTTSSCSSCCCGGGTCSSCC----TTE
T ss_pred EEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHH-hccCCceeeeEEEEecCCCCcceecHHHhcCCCC----ceE
Confidence 3567899999999984 59999999999999999999 99887 787 6787654321 1134444 5444 449
Q ss_pred EEEcCchhhH
Q 027798 160 HFVEDRLATL 169 (218)
Q Consensus 160 l~IGDs~~Di 169 (218)
++|+|++.-.
T Consensus 148 iiiDd~~~~~ 157 (372)
T 3ef0_A 148 VVIDDRGDVW 157 (372)
T ss_dssp EEEESCSGGG
T ss_pred EEEeCCHHHc
Confidence 9999998644
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.007 Score=59.12 Aligned_cols=114 Identities=14% Similarity=0.095 Sum_probs=75.8
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC-C--Ce-----------------------eEeCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT-P--DR-----------------------LYGLGTG 139 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~-f--d~-----------------------i~~~~~~ 139 (218)
++-|++.++++.| |+++.++|+.....+..+-+. +|+... + +. |++.-..
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~-lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHT-TTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHH-hCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 5778999998876 679999999999999999999 998531 0 01 1222111
Q ss_pred -ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 140 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 140 -pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
.|-.+++.++...+. +.|+||+.||.-+= ++|++- +.-|-++ +.....++.++.-.++..+.+.
T Consensus 567 ~~K~~iV~~lq~~g~~----Vam~GDGvNDapaL----k~AdvG---IAmg~gt--d~ak~aADivl~~~~~~~I~~a 631 (885)
T 3b8c_A 567 EHKYEIVKKLQERKHI----VGMTGDGVNDAPAL----KKADIG---IAVADAT--DAARGASDIVLTEPGLSVIISA 631 (885)
T ss_dssp HHHHHHHHHHHHTTCC----CCBCCCSSTTHHHH----HHSSSC---CCCSSSH--HHHGGGCSSCCSSCSHHHHTHH
T ss_pred HHHHHHHHHHHHCCCe----EEEEcCCchhHHHH----HhCCEe---EEeCCcc--HHHHHhcceeeccCchhHHHHH
Confidence 244488888765444 99999999999998 888873 2223222 2233345655544456666543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0022 Score=52.59 Aligned_cols=50 Identities=16% Similarity=-0.035 Sum_probs=34.1
Q ss_pred ChHHHHHHhhhcCCC-CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHH
Q 027798 140 PKVNVLKQLQKKPEH-QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 140 pKPe~l~~l~~~~~~-~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
.|..+++.+...... +++++++|||+.+|+.+. +.+|+. |.+|++..+++
T Consensus 179 sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml----~~ag~~---va~gna~~~~~ 229 (249)
T 2zos_A 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMF----EVVDKV---FIVGSLKHKKA 229 (249)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHH----TTSSEE---EEESSCCCTTE
T ss_pred ChHHHHHHHHHHhccCCCceEEEECCCcccHHHH----HhCCcE---EEeCCCCcccc
Confidence 888855555433222 455699999999999999 999973 44555543333
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.0097 Score=51.55 Aligned_cols=78 Identities=12% Similarity=0.207 Sum_probs=50.3
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHhHh---------hhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhc-
Q 027798 58 WSENREALIELSGKVRDEWMDTDFT---------TWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELA- 124 (218)
Q Consensus 58 ~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~- 124 (218)
.|++.+++.....++.+........ .......+||++.++++.| |.+++|||.++...++.+-.. .
T Consensus 103 aGmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~-~~ 181 (327)
T 4as2_A 103 SGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAAD-PR 181 (327)
T ss_dssp TTSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTC-GG
T ss_pred cCCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhh-cc
Confidence 4778877776666654421100000 0011235899999999987 679999999999999988876 3
Q ss_pred -CCCCCCCeeEeC
Q 027798 125 -GVTITPDRLYGL 136 (218)
Q Consensus 125 -gl~~~fd~i~~~ 136 (218)
|..-.-+.|+|+
T Consensus 182 ~~ygIp~e~ViG~ 194 (327)
T 4as2_A 182 YGYNAKPENVIGV 194 (327)
T ss_dssp GSCCCCGGGEEEE
T ss_pred cccCCCHHHeEee
Confidence 233344666664
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=92.96 E-value=0.17 Score=44.12 Aligned_cols=83 Identities=22% Similarity=0.218 Sum_probs=56.4
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCch---HHHHHHH-HHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQS---RFVETLL-RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~---~~~~~~L-~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+.| ++++.++||++. +.....| +. +|+....+.|+++... +..+.. +.+.++
T Consensus 28 ~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~-lgi~~~~~~i~ts~~~-----~~~~~~----~~~~v~ 97 (352)
T 3kc2_A 28 KKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSK-LDVDVSPLQIIQSHTP-----YKSLVN----KYSRIL 97 (352)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHH-HTSCCCGGGEECTTGG-----GGGGTT----TCSEEE
T ss_pred CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHh-cCCCCChhhEeehHHH-----HHHHHh----cCCEEE
Confidence 46889999998876 679999999862 3333444 47 8998888888887541 111111 123488
Q ss_pred EEcCchhhHHhccccccccCccEEE
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
+||-. .-.+.. +++|++.+.
T Consensus 98 viG~~-~l~~~l----~~~G~~~v~ 117 (352)
T 3kc2_A 98 AVGTP-SVRGVA----EGYGFQDVV 117 (352)
T ss_dssp EESST-THHHHH----HHHTCSEEE
T ss_pred EECCH-HHHHHH----HhCCCeEec
Confidence 88865 445556 788998875
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=92.96 E-value=0.063 Score=48.34 Aligned_cols=75 Identities=15% Similarity=0.165 Sum_probs=55.8
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCC-CCCe-eEeCCCC-C-hHHHHHHh-hhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTI-TPDR-LYGLGTG-P-KVNVLKQL-QKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~-~fd~-i~~~~~~-p-KPe~l~~l-~~~~~~~~~e~l 160 (218)
+...||+.++|+.+. +.++|.|.+.+.++..+++. ++... +|.. +++.+.. . .-.-|..+ +.+. +.++
T Consensus 82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~-LDp~~~~f~~Rl~sRd~cg~~~~KdL~~ll~rdl----~~vv 156 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDT----SMVV 156 (442)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-HCTTSTTTTTCEECTTTSSCSSCCCGGGTCSSCC----TTEE
T ss_pred EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-hccCCccccceEEEecCCCCceeeehHHhcCCCc----ceEE
Confidence 457799999999995 49999999999999999999 88876 7876 7766532 1 11123332 4443 4499
Q ss_pred EEcCchh
Q 027798 161 FVEDRLA 167 (218)
Q Consensus 161 ~IGDs~~ 167 (218)
+|+|++.
T Consensus 157 IIDd~p~ 163 (442)
T 3ef1_A 157 VIDDRGD 163 (442)
T ss_dssp EEESCSG
T ss_pred EEECCHH
Confidence 9999985
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=92.76 E-value=0.079 Score=45.70 Aligned_cols=90 Identities=14% Similarity=0.114 Sum_probs=62.0
Q ss_pred CcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCe----eEeCCCC------ChH----HHHHHh-hhcC
Q 027798 90 LYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDR----LYGLGTG------PKV----NVLKQL-QKKP 152 (218)
Q Consensus 90 l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~----i~~~~~~------pKP----e~l~~l-~~~~ 152 (218)
..||+.++|+.+. ..++|.|++...+++.+++. ++....+++ +..+... ..+ .-|..+ ..-|
T Consensus 165 ~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~-Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p 243 (320)
T 3shq_A 165 MRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRL-LGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYK 243 (320)
T ss_dssp BCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHH-TTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCT
T ss_pred eCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccC
Confidence 5699999999984 59999999999999999999 887765432 2222110 001 144444 0012
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEE
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
+.+++++++|+|++.-.... ..+|+.+.
T Consensus 244 ~rdl~~tIiIDdsp~~~~~~----p~NgI~I~ 271 (320)
T 3shq_A 244 QYNSSNTIMFDDIRRNFLMN----PKSGLKIR 271 (320)
T ss_dssp TCCGGGEEEEESCGGGGTTS----GGGEEECC
T ss_pred CCChhHEEEEeCChHHhccC----cCceEEeC
Confidence 23455699999999988887 77787653
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=92.20 E-value=0.65 Score=38.74 Aligned_cols=78 Identities=9% Similarity=0.046 Sum_probs=56.5
Q ss_pred CEEEEeCCchHHHHHHHHHhcCCCCCCCe--eEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCc
Q 027798 104 RIYIVTSNQSRFVETLLRELAGVTITPDR--LYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 104 ~l~IvTn~~~~~~~~~L~~~~gl~~~fd~--i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi 181 (218)
.-++||+.+--..-..+=- +||..+|.. ||++....|..+++++..+.+ +...-++|||+.--=+|| +..++
T Consensus 178 vNVLVTs~qLVPaLaK~LL-ygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eEe~AA----k~~n~ 251 (274)
T 3geb_A 178 VNVLVTTTQLIPALAKVLL-YGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEEEQGA----KKHNM 251 (274)
T ss_dssp EEEEEESSCHHHHHHHHHH-TTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHHHHHH----HHTTC
T ss_pred eEEEEecCchHHHHHHHHH-hhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHHHHHH----HHcCC
Confidence 5578887776544444443 899998855 888865588885555544432 234478999999999999 99999
Q ss_pred cEEEEe
Q 027798 182 NLYLVD 187 (218)
Q Consensus 182 ~~i~v~ 187 (218)
+++-+.
T Consensus 252 PFwrI~ 257 (274)
T 3geb_A 252 PFWRIS 257 (274)
T ss_dssp CEEECC
T ss_pred CeEEee
Confidence 998775
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=88.86 E-value=0.31 Score=39.84 Aligned_cols=40 Identities=15% Similarity=-0.036 Sum_probs=33.7
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcC----chhhHHhccccccccCccEEEE
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGD----s~~Di~aA~~~~~~aGi~~i~v 186 (218)
.|..+++.+ .+.++++++.||| +.||+.+- +.+|...++|
T Consensus 197 sKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml----~~~~~~g~av 240 (262)
T 2fue_A 197 DKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIF----ADPRTVGHSV 240 (262)
T ss_dssp STTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHH----HSTTSEEEEC
T ss_pred CHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHH----hcCccCcEEe
Confidence 677788887 4567778999999 99999999 9999877777
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=83.65 E-value=1.3 Score=36.22 Aligned_cols=49 Identities=27% Similarity=0.497 Sum_probs=39.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeC---CchHHHHHHHHHhcCCC-CCCCeeEeCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTS---NQSRFVETLLRELAGVT-ITPDRLYGLG 137 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn---~~~~~~~~~L~~~~gl~-~~fd~i~~~~ 137 (218)
..++|++.+.|+.+ +++++++|| ++...+...++. +|+. ..++.++++.
T Consensus 29 ~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~-lg~~~~~~~~ii~~~ 84 (284)
T 2hx1_A 29 NGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHK-LGLFSITADKIISSG 84 (284)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-TTCTTCCGGGEEEHH
T ss_pred CeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHH-CCcCCCCHhhEEcHH
Confidence 35678999998876 679999998 566778888898 9998 7778777653
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=83.07 E-value=1.7 Score=35.07 Aligned_cols=81 Identities=15% Similarity=0.322 Sum_probs=49.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchH---HHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEE
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 162 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~---~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~I 162 (218)
.++|++.++|+.+ +.+++++||++.. .....|+. +|+....+.++++.. .-...+++.. ....+.+|
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~-lg~~~~~~~i~~~~~-~~~~~l~~~~-----~~~~v~vi 89 (263)
T 1zjj_A 17 RAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLK-MGIDVSSSIIITSGL-ATRLYMSKHL-----DPGKIFVI 89 (263)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHT-TTCCCCGGGEEEHHH-HHHHHHHHHS-----CCCCEEEE
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEEecHH-HHHHHHHHhC-----CCCEEEEE
Confidence 3568999998876 6799999998763 33444555 788766666766532 1111233221 12348899
Q ss_pred cCchhhHHhccccccccCc
Q 027798 163 EDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 163 GDs~~Di~aA~~~~~~aGi 181 (218)
|+. .....+ +..|+
T Consensus 90 G~~-~l~~~l----~~~G~ 103 (263)
T 1zjj_A 90 GGE-GLVKEM----QALGW 103 (263)
T ss_dssp SCH-HHHHHH----HHHTS
T ss_pred cCH-HHHHHH----HHcCC
Confidence 985 344444 55565
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=82.05 E-value=1.4 Score=35.45 Aligned_cols=47 Identities=19% Similarity=0.285 Sum_probs=37.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeC---CchHHHHHHHHHhcCCCCCCCeeEeC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGL 136 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn---~~~~~~~~~L~~~~gl~~~fd~i~~~ 136 (218)
.+.|++.++|+++ |++++++|| .+...+...++. +|+....+.++++
T Consensus 24 ~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~-lg~~~~~~~ii~~ 76 (268)
T 3qgm_A 24 TPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRS-FGLEVGEDEILVA 76 (268)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHH-TTCCCCGGGEEEH
T ss_pred EeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHH-CCCCCCHHHeeCH
Confidence 4678899999877 679999999 567777888888 9998777777764
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=81.00 E-value=0.32 Score=39.21 Aligned_cols=41 Identities=15% Similarity=-0.014 Sum_probs=30.3
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcC----chhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGD----s~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|..+++.+ .+.++++++.||| +.||+.+- +.+|.-.++|.
T Consensus 188 ~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml----~~a~~ag~av~ 232 (246)
T 2amy_A 188 DKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIF----TDPRTMGYSVT 232 (246)
T ss_dssp SGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHH----HCTTEEEEECS
T ss_pred chHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHH----HhCCcceEEee
Confidence 677777777 3556777999999 99999999 98887566654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 218 | |||
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.88 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.88 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.87 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.86 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.83 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.81 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.8 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.79 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.77 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.72 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.71 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.71 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.7 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.7 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.69 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.69 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.56 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.55 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.53 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.52 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.48 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.44 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.4 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.39 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.29 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.16 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.14 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.03 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.0 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.95 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.92 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.82 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.19 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.98 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.97 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 97.82 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 97.71 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.53 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.47 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.15 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 96.73 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 96.71 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 96.12 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.46 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 94.71 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 94.31 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 93.82 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 93.74 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 93.2 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 93.17 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 93.08 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 91.95 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 91.79 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 91.37 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 90.03 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 86.05 |
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.88 E-value=3e-22 Score=160.07 Aligned_cols=169 Identities=13% Similarity=0.143 Sum_probs=124.8
Q ss_pred CCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc--CCCEEEEeCCchHH
Q 027798 38 LTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA--SSRIYIVTSNQSRF 115 (218)
Q Consensus 38 ~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L--~~~l~IvTn~~~~~ 115 (218)
.+.+++....+.......... ++.+........+...+ .........++||+.++|+.+ +.+++|+||++...
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~ 112 (210)
T d2ah5a1 38 PDAKTIRGFMGPPLESSFATC-LSKDQISEAVQIYRSYY----KAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTST 112 (210)
T ss_dssp CCHHHHHHTSSSCHHHHHHTT-SCGGGHHHHHHHHHHHH----HHTGGGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHH
T ss_pred CCHHHHHHhhhcchhhhcccc-ccchhhHHHHHHHHHHH----HhhhhhcccchhHHHHHHhhhhcccchhhcccccchh
Confidence 444554433333333333322 33344444444444433 233345678999999999988 45999999999999
Q ss_pred HHHHHHHhcCCCCCCCeeEeCCCC--ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH
Q 027798 116 VETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 116 ~~~~L~~~~gl~~~fd~i~~~~~~--pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
++..+++ +|+..+||.|++++.. |||+++.....+.+.+|++|+||||+.+|+.+| +++|+++++|.||++..
T Consensus 113 ~~~~l~~-~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa----~~aGi~~i~v~~g~~~~ 187 (210)
T d2ah5a1 113 AQDMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGA----RETGIQKLAITWGFGEQ 187 (210)
T ss_dssp HHHHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHH----HHHTCEEEEESSSSSCH
T ss_pred hhHHHHh-hcccccccccccccccccccccccchhhhhhhcccccceeecCCHHHHHHH----HHcCCeEEEEcCCCCCH
Confidence 9999999 9999999999987654 899844444444445556699999999999999 99999999999999999
Q ss_pred HHHHhhcCCCceEEechhhHhhhcC
Q 027798 194 KERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 194 ~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
+++...+|+ +.+.++.||.+.|.
T Consensus 188 ~~l~~~~pd--~vi~~l~el~~~le 210 (210)
T d2ah5a1 188 ADLLNYQPD--YIAHKPLEVLAYFQ 210 (210)
T ss_dssp HHHHTTCCS--EEESSTTHHHHHTC
T ss_pred HHHHhCCCC--EEECCHHHHHHHhC
Confidence 988887777 55679999998764
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.88 E-value=7.4e-23 Score=163.93 Aligned_cols=162 Identities=14% Similarity=0.199 Sum_probs=127.2
Q ss_pred CCCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhcC--CCEEEEeCCchH
Q 027798 37 GLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLAS--SRIYIVTSNQSR 114 (218)
Q Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~ 114 (218)
..+.+++...|.......+.+.+.+..........+.+. +..+.....+|||+.++|+.|+ ++++|+||++..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~ 109 (207)
T d2hdoa1 35 PFSPAQAQKTFPMAAEQAMTELGIAASEFDHFQAQYEDV-----MASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRN 109 (207)
T ss_dssp CCCHHHHHHHTTSCHHHHHHHTTCCGGGHHHHHHHHHHH-----HTTCGGGCEECTTHHHHHHHSCTTSEEEEECSSCHH
T ss_pred CCCHHHHHHHhcchhhhhhhccccchhhHHHHHHHhhhh-----hcccccccccccchhhhhhhhccccccccccccccc
Confidence 467888888888877777888777665544444444333 2333456789999999999994 599999999999
Q ss_pred HHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEE
Q 027798 115 FVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 115 ~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
.+...|++ +|+..+|+.+++++.. |+|+ ++++++++| ++|+|||||.+|+++| +++||++++|
T Consensus 110 ~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~----~~~l~VgDs~~Di~~a----~~aG~~~i~v 180 (207)
T d2hdoa1 110 ELESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP----QNALFIGDSVSDEQTA----QAANVDFGLA 180 (207)
T ss_dssp HHHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG----GGEEEEESSHHHHHHH----HHHTCEEEEE
T ss_pred cccccccc-ccccccccccccccccccchhhhhhhcccccceeeec----cceeEecCCHHHHHHH----HHcCCeEEEE
Confidence 99999999 9999999999988643 5566 555555554 4599999999999999 9999999999
Q ss_pred eCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 187 DWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 187 ~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
.||+.+..+.. +++ ..+.++.||.++
T Consensus 181 ~~g~~~~~~~~--~~~--~~i~~l~dll~l 206 (207)
T d2hdoa1 181 VWGMDPNADHQ--KVA--HRFQKPLDILEL 206 (207)
T ss_dssp GGGCCTTGGGS--CCS--EEESSGGGGGGG
T ss_pred ecCCCChhHhh--hcC--cEeCCHHHHHhh
Confidence 99999876543 344 556799998764
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.87 E-value=8.2e-22 Score=159.77 Aligned_cols=160 Identities=12% Similarity=0.013 Sum_probs=118.8
Q ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhh-hhcCCCcccHHHHHHhc---C-CCEEEEeCCchHHHHHHHHHhcC
Q 027798 51 KPVIMEEWSENREALIELSGKVRDEWMDTDFTTW-IGANRLYPGVSDALKLA---S-SRIYIVTSNQSRFVETLLRELAG 125 (218)
Q Consensus 51 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~gv~e~L~~L---~-~~l~IvTn~~~~~~~~~L~~~~g 125 (218)
....++..+.+.....+.+....+.|.....+.. .....+|||+.++|+.| + .+++|+||+++..+...|+. +|
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~-~g 130 (228)
T d2hcfa1 52 IYEVLSNVGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PG 130 (228)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TT
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhh-hc
Confidence 3445566667655554555555544433222221 23457899999999988 2 48999999999999999999 99
Q ss_pred CCCCCCeeEeCCCC----ChHHH-HHHhhh--cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHh
Q 027798 126 VTITPDRLYGLGTG----PKVNV-LKQLQK--KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 198 (218)
Q Consensus 126 l~~~fd~i~~~~~~----pKPe~-l~~l~~--~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~ 198 (218)
|..+||.++++++. |+|+. +..+.. ....+|++|+||||+.+|+++| +++||++|+|.||+.+++++..
T Consensus 131 l~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA----~~aG~~~i~v~~g~~~~~~l~~ 206 (228)
T d2hcfa1 131 IDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCA----RELDARSIAVATGNFTMEELAR 206 (228)
T ss_dssp CSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHH----HTTTCEEEEECCSSSCHHHHHT
T ss_pred ccccccccccccccccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHH----HHcCCEEEEEcCCCCCHHHHhh
Confidence 99999999988754 55662 222211 1234566699999999999999 9999999999999999998887
Q ss_pred hcCCCceEEechhhHhhhc
Q 027798 199 AASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 199 ~~~~~~i~~~~l~el~~~~ 217 (218)
.+|+ +.+.|+.||.++|
T Consensus 207 ~~ad--~vi~~~~el~~~l 223 (228)
T d2hcfa1 207 HKPG--TLFKNFAETDEVL 223 (228)
T ss_dssp TCCS--EEESCSCCHHHHH
T ss_pred CCCC--EEECCHHHHHHHH
Confidence 7777 5566999988776
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.86 E-value=9.1e-22 Score=157.79 Aligned_cols=127 Identities=19% Similarity=0.227 Sum_probs=105.7
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~ 157 (218)
.....+|||+.++|+.| +.+++|+||+++..++..|++ +||..+|+.+++++.. |||++...+....+.+|+
T Consensus 91 ~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~ 169 (224)
T d2hsza1 91 CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPK 169 (224)
T ss_dssp TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGG
T ss_pred ccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHh-cCchhhccccccccccccccccchhhHHHHHHhhhhhh
Confidence 34567999999999987 579999999999999999999 9999999999988643 777744333333334455
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
+|+||||+.+|+++| +++|+++|+|.||+++..++...+|+ +.+.++.||.+++.
T Consensus 170 ~~~~igD~~~Di~~A----~~aG~~~i~v~~g~~~~~~l~~~~~d--~~v~~l~dL~~iie 224 (224)
T d2hsza1 170 QILFVGDSQNDIFAA----HSAGCAVVGLTYGYNYNIPIAQSKPD--WIFDDFADILKITQ 224 (224)
T ss_dssp GEEEEESSHHHHHHH----HHHTCEEEEESSSCSTTCCGGGGCCS--EEESSGGGGGGGTC
T ss_pred ccchhcCcHHHHHHH----HHcCCeEEEEeCCCCCcchhhhcCCC--EEECCHHHHHHhhC
Confidence 599999999999999 99999999999999988777777777 66669999998863
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.83 E-value=8.9e-21 Score=156.20 Aligned_cols=123 Identities=15% Similarity=0.082 Sum_probs=98.6
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC-CeeEeCCCC----ChHH----HHHHhhhcC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLGTG----PKVN----VLKQLQKKP 152 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f-d~i~~~~~~----pKPe----~l~~l~~~~ 152 (218)
.....++||+.++|+.| +.+++|+||+++..++..|++ +|+..+| |.++++++. |+|+ +++++++.|
T Consensus 95 ~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~-~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p 173 (257)
T d1swva_ 95 PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYP 173 (257)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCS
T ss_pred hccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHH-HhhcccccccccccccccccccChHHHHHHHHHhCCCC
Confidence 45568999999999988 479999999999999999999 9999987 888887654 4454 666777643
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCC----HHH-------------------HHhhcCCCceEEec
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT----PKE-------------------RAEAASMPRIQLLQ 209 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~----~~~-------------------l~~~~~~~~i~~~~ 209 (218)
+++|+||||+.+|+++| ++|||.+|+|.||++. .++ +...+|+ +.+.+
T Consensus 174 ---~~~~v~VgDs~~Di~aA----~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad--~vi~~ 244 (257)
T d1swva_ 174 ---MNHMIKVGDTVSDMKEG----RNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH--FTIET 244 (257)
T ss_dssp ---GGGEEEEESSHHHHHHH----HHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS--EEESS
T ss_pred ---cceEEEEeCChhhHHHH----HHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCC--EEECC
Confidence 24499999999999999 9999999999999752 222 3334566 66669
Q ss_pred hhhHhhhc
Q 027798 210 LSDFCTKL 217 (218)
Q Consensus 210 l~el~~~~ 217 (218)
+.||.++|
T Consensus 245 l~eL~~ii 252 (257)
T d1swva_ 245 MQELESVM 252 (257)
T ss_dssp GGGHHHHH
T ss_pred HHHHHHHH
Confidence 99998876
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.81 E-value=1.8e-19 Score=144.81 Aligned_cols=164 Identities=16% Similarity=0.133 Sum_probs=117.4
Q ss_pred CCCHHHHHHhHH-----HhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhcCCCEEEEeCC
Q 027798 37 GLTVEGILENWL-----KIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSN 111 (218)
Q Consensus 37 ~~s~~~i~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L~~~l~IvTn~ 111 (218)
..+.+++...+. .....+....+.... ...++.+...+ ...+.....++||+.++|+.|+.+.+|+||+
T Consensus 34 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~g~~~~L~~l~~~~~i~t~~ 107 (222)
T d2fdra1 34 PISVEEMGERFAGMTWKNILLQVESEASIPLS--ASLLDKSEKLL----DMRLERDVKIIDGVKFALSRLTTPRCICSNS 107 (222)
T ss_dssp CCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCC--THHHHHHHHHH----HHHHHHHCCBCTTHHHHHHHCCSCEEEEESS
T ss_pred CCCHHHHHHHHhhhcccccccccccccccccc--ccchhHHHHHH----HHHhhhccchhhhHHHHhhhccccceeeeec
Confidence 466677766553 344444555554321 11222222222 1222345789999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCCCCCeeEe-CC---CC---ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccC
Q 027798 112 QSRFVETLLRELAGVTITPDRLYG-LG---TG---PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 112 ~~~~~~~~L~~~~gl~~~fd~i~~-~~---~~---pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aG 180 (218)
....+...|++ +|+..+|+.+++ .+ .. |+|+ ++++++++|++ |+||||+..|+++| +++|
T Consensus 108 ~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~----~l~vgDs~~dv~aA----~~aG 178 (222)
T d2fdra1 108 SSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR----VVVVEDSVHGIHGA----RAAG 178 (222)
T ss_dssp CHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG----EEEEESSHHHHHHH----HHTT
T ss_pred chhhhhhhhcc-cccccccceeecccccccccccccCHHHHHHHHHhhCCCCce----EEEEcCCHHHHHHH----HHcC
Confidence 99999999999 999999997654 33 12 4555 66667765555 99999999999999 9999
Q ss_pred ccEEEEeCCCCCH----HHHHhhcCCCceEEechhhHhhhc
Q 027798 181 WNLYLVDWGYNTP----KERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 181 i~~i~v~~G~~~~----~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|++|+|.||+.+. +.+...+|+ +.+.++.||.++|
T Consensus 179 ~~~i~v~~~~~~~~~~~~~l~~~~ad--~vi~~l~eL~~ll 217 (222)
T d2fdra1 179 MRVIGFTGASHTYPSHADRLTDAGAE--TVISRMQDLPAVI 217 (222)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHTCS--EEESCGGGHHHHH
T ss_pred CEEEEEccCCCCCcchHHHHHhCCCC--EEECCHHHHHHHH
Confidence 9999999998642 345566776 6666999987765
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=2.1e-19 Score=143.98 Aligned_cols=117 Identities=15% Similarity=0.153 Sum_probs=96.9
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.| +++++|+||+++..++..+++ +|+.++|+.+++++.. |+|+ ++++++++|++
T Consensus 85 ~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~ 163 (218)
T d1te2a_ 85 ETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLT 163 (218)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGG
T ss_pred ccccccchHHHHHHHhhhcccccccccccccccccccccc-ccccccccccccccccccchhhHHHHHHHHHHcCCCchh
Confidence 4457899999999988 479999999999999999999 9999999999998754 5555 66777766655
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
|+||||+..|+.+| +++|+++|+|.+++...+. ....++ +.+.++.||.
T Consensus 164 ----~l~igD~~~di~aA----~~~G~~~i~v~~~~~~~~~-~~~~a~--~~i~~l~el~ 212 (218)
T d1te2a_ 164 ----CVALEDSVNGMIAS----KAARMRSIVVPAPEAQNDP-RFVLAN--VKLSSLTELT 212 (218)
T ss_dssp ----EEEEESSHHHHHHH----HHTTCEEEECCCTTTTTCG-GGGGSS--EECSCGGGCC
T ss_pred ----cEEEeeCHHHHHHH----HHcCCEEEEECCCCCccch-hhcCCC--EEECChhhCC
Confidence 99999999999999 9999999999888765433 334555 6667998873
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.79 E-value=2.6e-19 Score=142.39 Aligned_cols=114 Identities=18% Similarity=0.214 Sum_probs=90.5
Q ss_pred hhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcC
Q 027798 84 WIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKP 152 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~ 152 (218)
+.....+|||+.++|+.| +.+++|+||++.. +..+|++ +|+..||+.|+|++.. |+|+ +++.++++|
T Consensus 77 ~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~-~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p 154 (204)
T d2go7a1 77 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNS 154 (204)
T ss_dssp CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCG
T ss_pred hcccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhh-cccccccccccccccccccchhHHHHHHHHHHhCCCC
Confidence 345678999999999988 5799999998875 5578999 9999999999998643 5555 566666655
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++ |+||||+.+|+++| +++||++|++.+|... ++ ..+.++.++.+++
T Consensus 155 ~~----~l~VgD~~~Di~~A----~~~G~~~i~v~~~~~~--------~~--~~~~~~~dl~~l~ 201 (204)
T d2go7a1 155 DN----TYYIGDRTLDVEFA----QNSGIQSINFLESTYE--------GN--HRIQALADISRIF 201 (204)
T ss_dssp GG----EEEEESSHHHHHHH----HHHTCEEEESSCCSCT--------TE--EECSSTTHHHHHT
T ss_pred ce----EEEEeCCHHHHHHH----HHcCCeEEEEcCCCCC--------cC--eecCCHHHHHHHh
Confidence 54 99999999999999 9999999999888432 22 4455777776654
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.77 E-value=3e-18 Score=138.79 Aligned_cols=120 Identities=18% Similarity=0.189 Sum_probs=98.7
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcCCCC
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~~~~ 155 (218)
....+|||+.++|+.|+ ++++|+||++...+...+++ +|+.++||.|++++. + |+|+ ++++++++|++
T Consensus 97 ~~~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~- 174 (230)
T d1x42a1 97 RYGELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEE- 174 (230)
T ss_dssp HHCCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGG-
T ss_pred hhCcccccHHHHHHHhhccCceeeeeccccccchhhhcc-cccccccccccccccccccchhhHHHHHHHhhhcccccc-
Confidence 45689999999999884 59999999999999999999 999999999999853 3 5565 77777776665
Q ss_pred CCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 156 GLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 156 ~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
|+||||+. +|+++| +++|++++++.++....+. ..+++ +.+.|+.||.+.|+
T Consensus 175 ---~l~vgD~~~~Di~~A----~~~G~~~v~v~~~~~~~~~--~~~~d--~~i~~l~el~~~l~ 227 (230)
T d1x42a1 175 ---AVYVGDNPVKDCGGS----KNLGMTSILLDRKGEKREF--WDKCD--FIVSDLREVIKIVD 227 (230)
T ss_dssp ---EEEEESCTTTTHHHH----HTTTCEEEEECTTSCCGGG--GGGSS--EEESSTTHHHHHHH
T ss_pred ---cceeecCcHhHHHHH----HHcCCEEEEECCCCCCccc--ccCCC--EEECCHHHHHHHHH
Confidence 99999985 799999 9999999999988665432 23455 66779999887763
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.72 E-value=9e-18 Score=136.78 Aligned_cols=122 Identities=13% Similarity=0.076 Sum_probs=94.9
Q ss_pred hcCCCcccHHHHHHhc--CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 86 GANRLYPGVSDALKLA--SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L--~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
....++||+.++|+.| +++++|+||++...+...+++ +|+..+||.+++++.. |+|+ ++++++++|++
T Consensus 106 ~~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~- 183 (247)
T d2gfha1 106 QHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGD- 183 (247)
T ss_dssp HTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGG-
T ss_pred ccCccCccHHHHHHHhhcccceEEeecccchhhhhhhhh-ccccccccccccccccccchhhhhhHHHHHHHhhcCHHh-
Confidence 4568999999999988 469999999999999999999 9999999999988643 5555 66666665555
Q ss_pred CCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 156 GLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 156 ~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
|+||||+. +|+.+| +++||+++.+..+.+......... |.+.+.++.||.++|+
T Consensus 184 ---~l~iGD~~~~Di~~A----~~~G~~~~~~~~~~~~~~~~~~~~--p~~~i~~l~eL~~ll~ 238 (247)
T d2gfha1 184 ---CVMVGDTLETDIQGG----LNAGLKATVWINKSGRVPLTSSPM--PHYMVSSVLELPALLQ 238 (247)
T ss_dssp ---EEEEESCTTTHHHHH----HHTTCSEEEEECTTCCCCSSCCCC--CSEEESSGGGHHHHHH
T ss_pred ---cceeccChHhHHHHH----HHcCCeEEEEECCCCCCcccccCC--CCEEECCHHHHHHHHH
Confidence 99999996 799999 999999765544434332222333 4477779999988763
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=4.9e-17 Score=130.74 Aligned_cols=118 Identities=13% Similarity=0.099 Sum_probs=91.7
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC-CC-C---ChHH----HHHHhhhcCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-GT-G---PKVN----VLKQLQKKPE 153 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~-~~-~---pKPe----~l~~l~~~~~ 153 (218)
....+|||+.++|..| +++++|+||+++...+..++. .|+..+|+...+. +. . |+|+ ++++++++|+
T Consensus 124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~ 202 (253)
T d1zs9a1 124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN 202 (253)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHH-cCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcC
Confidence 4467999999999988 579999999999999999999 9999998865432 32 2 6666 7777777666
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
+ |+||||+.+|+.+| +++||++++|.++.+.........++ ..+.||.||.
T Consensus 203 ~----~l~vgD~~~dv~aA----~~aG~~ti~v~r~g~~~~~~~~~~~~--~~i~sl~EL~ 253 (253)
T d1zs9a1 203 N----ILFLTDVTREASAA----EEADVHVAVVVRPGNAGLTDDEKTYY--SLITSFSELY 253 (253)
T ss_dssp G----EEEEESCHHHHHHH----HHTTCEEEEECCTTCCCCCHHHHHHS--CEESSGGGCB
T ss_pred c----EEEEeCCHHHHHHH----HHcCCEEEEEeCCCCCCCchhhcCCC--cEECChHHhC
Confidence 5 99999999999999 99999999998754443322334444 3455888873
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.71 E-value=1.1e-17 Score=133.55 Aligned_cols=119 Identities=13% Similarity=0.131 Sum_probs=97.7
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--ChH--H----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKV--N----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKP--e----~l~~l~~~~~~ 154 (218)
....++|++.++|+.+ +.+++|+||+.....+..+++ .++..+||.+++++.. .|| + ++++++++|++
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~-~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e 168 (220)
T d1zrna_ 90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA 168 (220)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred ccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhh-ccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCce
Confidence 4567999999999877 469999999999999999999 9999999999998643 455 4 77778776666
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
|+||||+..|+++| +++||++++|.++....+++ ...| .+.+.|+.||.++
T Consensus 169 ----~l~VgD~~~Di~~A----~~aG~~~v~v~r~~~~~~~~-~~~~--d~~i~~l~el~~l 219 (220)
T d1zrna_ 169 ----ILFVASNAWDATGA----RYFGFPTCWINRTGNVFEEM-GQTP--DWEVTSLRAVVEL 219 (220)
T ss_dssp ----EEEEESCHHHHHHH----HHHTCCEEEECTTCCCCCSS-SCCC--SEEESSHHHHHTT
T ss_pred ----EEEEecChHhHHHH----HHcCCEEEEEcCCCCCcccc-cCCC--CEEECCHHHHHhh
Confidence 99999999999999 99999999998765544332 2344 4777899999875
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.70 E-value=2.4e-17 Score=128.14 Aligned_cols=100 Identities=14% Similarity=0.052 Sum_probs=83.0
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchH-HHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHhhhcCCCCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSR-FVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQLQKKPEHQGL 157 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~-~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~~~~~~~ 157 (218)
....+|||+.++|+.| |++++|+||+++. ..+..++. +++..+|+.+.+... |||+ ++++++++|++
T Consensus 43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~-~~~~~~~~~~~~~~k-p~~~~~~~~~~~~~~~~~~--- 117 (164)
T d1u7pa_ 43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLEL-FDLGKYFIQREIYPG-SKVTHFERLHHKTGVPFSQ--- 117 (164)
T ss_dssp CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHH-TTCGGGCSEEEESSS-CHHHHHHHHHHHHCCCGGG---
T ss_pred cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhc-ccccccceeeecccC-CChHHHHHHHHHhCCChHH---
Confidence 4468999999999988 5799999988764 56777898 999999998877654 7887 66666665555
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHH
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
|+||||+..|+++| +++||++|+|.||++ .+++
T Consensus 118 -~l~igD~~~di~aA----~~aG~~~i~v~~G~~-~~~~ 150 (164)
T d1u7pa_ 118 -MVFFDDENRNIIDV----GRLGVTCIHIRDGMS-LQTL 150 (164)
T ss_dssp -EEEEESCHHHHHHH----HTTTCEEEECSSCCC-HHHH
T ss_pred -EEEEcCCHHHHHHH----HHcCCEEEEECCCCC-hHHH
Confidence 99999999999999 999999999999985 4444
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.70 E-value=5e-17 Score=128.02 Aligned_cols=139 Identities=17% Similarity=0.215 Sum_probs=95.3
Q ss_pred CCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchH
Q 027798 38 LTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSR 114 (218)
Q Consensus 38 ~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~ 114 (218)
.+.+++...++......++......+.+ ...+++.+ ........+|||+.++|+.| +.+++|+||++..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~ 107 (187)
T d2fi1a1 36 QDHDSVYQALKVSTPFAIETFAPNLENF---LEKYKENE-----ARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQ 107 (187)
T ss_dssp CCHHHHHHHHHHCHHHHHHHHCTTCTTH---HHHHHHHH-----HHHTTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTH
T ss_pred ccHHHHHhhhhccchhhhhhhhHHHHHH---HHHHHHHH-----HHHhhcCcccchhHHHHHHHHhhhccccccccCccc
Confidence 4566766666655555555543322222 22222222 11234678999999999876 5799999999887
Q ss_pred HHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 115 FVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 115 ~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
.. ..|++ +++..+||.+++++.. |+|++......+. ++++|+||||+..|+++| +++|++++++++++
T Consensus 108 ~~-~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~--~~~~~l~vgDs~~Di~aA----~~aG~~~i~v~~~~ 179 (187)
T d2fi1a1 108 VL-EILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKY--QISSGLVIGDRPIDIEAG----QAAGLDTHLFTSIV 179 (187)
T ss_dssp HH-HHHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHT--TCSSEEEEESSHHHHHHH----HHTTCEEEECSCHH
T ss_pred hh-hhhhh-hccccccccccccccccccCCCHHHHHHHHHHc--CCCCeEEEeCCHHHHHHH----HHcCCEEEEECCCC
Confidence 66 47899 9999999999998754 4455333332221 233499999999999999 99999999998765
Q ss_pred CC
Q 027798 191 NT 192 (218)
Q Consensus 191 ~~ 192 (218)
..
T Consensus 180 ~~ 181 (187)
T d2fi1a1 180 NL 181 (187)
T ss_dssp HH
T ss_pred Ch
Confidence 43
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.69 E-value=5.4e-18 Score=135.90 Aligned_cols=122 Identities=16% Similarity=0.130 Sum_probs=86.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC
Q 027798 60 ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~ 136 (218)
++.+.+........+.|.+.. . ......++||+.++|+.| +.+++++||+.. ....++. +|+..+|+.++++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~-~~l~~~f~~i~~~ 138 (221)
T d1o08a_ 64 VSAEEFKELAKRKNDNYVKMI-Q-DVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLER-MNLTGYFDAIADP 138 (221)
T ss_dssp CCHHHHHHHHHHHHHHHHHHT-T-TCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-TTCGGGCSEECCT
T ss_pred chhhhhhhHHHHHHhhccccc-c-ccccccccCCceeccccccccccceEEEeecch--hhHHHHh-hcccccccccccc
Confidence 345555555554444443211 1 112457999999999988 468999998754 5788999 9999999999988
Q ss_pred CCC----ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 137 GTG----PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 137 ~~~----pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
+.. |+|+++.......+.+|++|+||||+.+|+++| +++||++|+|.+++
T Consensus 139 ~~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A----~~aG~~~i~v~~~~ 192 (221)
T d1o08a_ 139 AEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAI----KDSGALPIGVGRPE 192 (221)
T ss_dssp TTSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHH----HHHTCEEEEESCHH
T ss_pred ccccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHH----HHcCCEEEEECChh
Confidence 643 556644333333334455599999999999999 99999999998753
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.69 E-value=4.9e-17 Score=131.61 Aligned_cols=124 Identities=18% Similarity=0.230 Sum_probs=97.5
Q ss_pred hcCCCcccHHHHHHhcC-CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCC
Q 027798 86 GANRLYPGVSDALKLAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~-~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~ 156 (218)
....++|++.++|+.|+ ..++++||++...+...+++ +|+..+||.|++++.. |.|+ ++++++++|++
T Consensus 90 ~~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~-~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e-- 166 (245)
T d1qq5a_ 90 NRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAE-- 166 (245)
T ss_dssp GSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGG--
T ss_pred cccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhh-cccccccccccccccccccCccHHHHHHHHHHhCCChhh--
Confidence 34689999999999985 59999999999999999999 9999999999998643 5555 77778876666
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeCCCCC------------HHH----H----HhhcCCCceEEechhhHhhh
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT------------PKE----R----AEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~------------~~~----l----~~~~~~~~i~~~~l~el~~~ 216 (218)
|+||||+.+|+.+| +++||++|+|..+-.. +.. + ......|.+.+.++.||.++
T Consensus 167 --~l~VgD~~~di~~A----~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~l 240 (245)
T d1qq5a_ 167 --VLFVSSNGFDVGGA----KNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRL 240 (245)
T ss_dssp --EEEEESCHHHHHHH----HHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHH
T ss_pred --EEEEeCCHHHHHHH----HHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHH
Confidence 99999999999999 9999999999753210 000 0 01122355777899999987
Q ss_pred cC
Q 027798 217 LK 218 (218)
Q Consensus 217 ~~ 218 (218)
++
T Consensus 241 v~ 242 (245)
T d1qq5a_ 241 VR 242 (245)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.56 E-value=2.1e-15 Score=132.22 Aligned_cols=122 Identities=14% Similarity=0.003 Sum_probs=94.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCe--eEeCCC------------C---ChHHHHHHh
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDR--LYGLGT------------G---PKVNVLKQL 148 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~--i~~~~~------------~---pKPe~l~~l 148 (218)
.|+||+.++|+.| |++++|+||+++..++.++++ +||.++|+. +++.++ . |.|+++...
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~-lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 4678999999987 579999999999999999999 999999975 343211 1 556633332
Q ss_pred h----h----------cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH---HHHHhhcCCCceEEechh
Q 027798 149 Q----K----------KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP---KERAEAASMPRIQLLQLS 211 (218)
Q Consensus 149 ~----~----------~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~---~~l~~~~~~~~i~~~~l~ 211 (218)
. . ....+|++|+||||+.+|+.+| |+||+++|+|.||++.. +++...+++ +.+.++.
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aa----k~Ag~~~Igv~~G~~g~~~~~el~~~~AD--~ii~~~~ 367 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSA----QKIGATFIGTLTGLKGKDAAGELEAHHAD--YVINHLG 367 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHH----HHHTCEEEEESCBTTBGGGHHHHHHTTCS--EEESSGG
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHH----HHCCCCEEEEecCCCCcccHHHHHhCCCC--EEECCHH
Confidence 1 1 1234567799999999999999 99999999999998754 356666777 5556999
Q ss_pred hHhhhc
Q 027798 212 DFCTKL 217 (218)
Q Consensus 212 el~~~~ 217 (218)
||.++|
T Consensus 368 el~~il 373 (380)
T d1qyia_ 368 ELRGVL 373 (380)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 998775
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.55 E-value=4e-16 Score=124.31 Aligned_cols=107 Identities=21% Similarity=0.148 Sum_probs=86.2
Q ss_pred hhhcCCCcccHHHHHHhc---CCCEEEEeCCc----hHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHh
Q 027798 84 WIGANRLYPGVSDALKLA---SSRIYIVTSNQ----SRFVETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQL 148 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~----~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l 148 (218)
+.....++||+.++|..| +.+++|+||+. .......+.. +|+..|||.+++++. + |+|+ +++++
T Consensus 92 ~~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~-~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~ 170 (222)
T d1cr6a1 92 AMAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMM-CELSQHFDFLIESCQVGMIKPEPQIYNFLLDTL 170 (222)
T ss_dssp HHHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHH-HHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHH
T ss_pred HHhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHh-cChHhhhceeeehhhccCCCCChHHHHHHHHHh
Confidence 345568999999999988 46999999853 3455666777 899999999999863 2 6666 66666
Q ss_pred hhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhh
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 199 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~ 199 (218)
+++|++ |+||||+..|+++| +++||++|+|.+|....+++...
T Consensus 171 ~v~p~~----~l~IgD~~~Di~~A----~~aG~~ti~V~~~~~~~~el~~~ 213 (222)
T d1cr6a1 171 KAKPNE----VVFLDDFGSNLKPA----RDMGMVTILVHNTASALRELEKV 213 (222)
T ss_dssp TSCTTS----EEEEESSSTTTHHH----HHHTCEEEECCSSSHHHHHHHHH
T ss_pred CCCcce----EEEEECCHHHHHHH----HHcCCEEEEECCcchHHHHHHHh
Confidence 666655 99999999999999 99999999999887767776654
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=7e-16 Score=121.91 Aligned_cols=107 Identities=21% Similarity=0.141 Sum_probs=82.8
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchH----HHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhh
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSR----FVETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQLQ 149 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~----~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~ 149 (218)
.....++||+.++|+.| +.+++|+||.... ........ .++..+||.|++++. + |+|+ +++.++
T Consensus 95 ~~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~-~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~ 173 (225)
T d1zd3a1 95 ISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-CELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLK 173 (225)
T ss_dssp HHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-HHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred hhcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhh-cChHhhccEEEeccccccchhHHHHHHHHhhhcc
Confidence 34567999999999987 4699999987654 33344445 688899999999853 3 6666 666666
Q ss_pred hcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhc
Q 027798 150 KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAA 200 (218)
Q Consensus 150 ~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~ 200 (218)
++|++ |+||||+..|+++| +++||++|+|.++....+++....
T Consensus 174 ~~p~e----~l~VgD~~~Di~~A----~~~G~~ti~v~~~~~~~~~l~~~~ 216 (225)
T d1zd3a1 174 ASPSE----VVFLDDIGANLKPA----RDLGMVTILVQDTDTALKELEKVT 216 (225)
T ss_dssp CCGGG----EEEEESCHHHHHHH----HHTTCEEEECSSHHHHHHHHHHHH
T ss_pred cCccc----eeEEecCHHHHHHH----HHcCCEEEEECCcchhHHHHHHcc
Confidence 65555 99999999999999 999999999988766566665543
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=2.3e-14 Score=112.90 Aligned_cols=120 Identities=20% Similarity=0.194 Sum_probs=83.5
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCCCCeeEeCC----------
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG---------- 137 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~fd~i~~~~---------- 137 (218)
+...++||+.++|+.| +.+++|+||++. ......+.. .|+. ..+..+|..
T Consensus 24 ~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~cp~~p~~~~~~~~ 101 (182)
T d2gmwa1 24 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVD-LDGIYYCPHHPQGSVEEFR 101 (182)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCC-CSEEEEECCBTTCSSGGGB
T ss_pred HHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhh-hccc-ccceeeccccccccccccc
Confidence 4568999999999987 579999999974 223333443 4442 222223321
Q ss_pred --C---CChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE-EEEeCCCCCHHHHHhhcCCCceEE
Q 027798 138 --T---GPKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQL 207 (218)
Q Consensus 138 --~---~pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~-i~v~~G~~~~~~l~~~~~~~~i~~ 207 (218)
. .|+|+ ++++++.++++ ++||||+.+|+++| ++||+.+ ++|.+|+...+.. ..+++ +.+
T Consensus 102 ~~~~~rKP~p~m~~~~~~~~~i~~~~----s~mVGDs~~Di~aA----~~Ag~~~~~lv~~g~~~~~~~-~~~ad--~v~ 170 (182)
T d2gmwa1 102 QVCDCRKPHPGMLLSARDYLHIDMAA----SYMVGDKLEDMQAA----VAANVGTKVLVRTGKPITPEA-ENAAD--WVL 170 (182)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBCGGG----CEEEESSHHHHHHH----HHTTCSEEEEESSSSCCCHHH-HHHCS--EEE
T ss_pred ccccccCCccccccchhhhccccccc----ccccCCCHHHHHHH----HHhCCCcEEEECCCCCCCccc-ccCCC--EEE
Confidence 1 15555 56666665555 99999999999999 9999964 7889898765544 44677 556
Q ss_pred echhhHhhhcC
Q 027798 208 LQLSDFCTKLK 218 (218)
Q Consensus 208 ~~l~el~~~~~ 218 (218)
.++.|+.+.||
T Consensus 171 ~~l~dl~~~ik 181 (182)
T d2gmwa1 171 NSLADLPQAIK 181 (182)
T ss_dssp SCGGGHHHHHH
T ss_pred CCHHHHHHHhc
Confidence 69999998874
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.48 E-value=8.5e-15 Score=118.57 Aligned_cols=97 Identities=25% Similarity=0.195 Sum_probs=69.7
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCCCCeeEeCC----------
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG---------- 137 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~fd~i~~~~---------- 137 (218)
+...+|||+.++|+.| |++++|+||++. +.+...|.. .|+ +++.++...
T Consensus 45 ~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~-~g~--~~~~~~~~~~~~~~~~~~~ 121 (209)
T d2o2xa1 45 AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGV--FVDMVLACAYHEAGVGPLA 121 (209)
T ss_dssp GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTC--CCSEEEEECCCTTCCSTTC
T ss_pred HHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhh-ccc--ccceEEEeccccccccccc
Confidence 3468999999999988 679999999762 233344444 454 455554321
Q ss_pred ---CC-ChHH------HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH
Q 027798 138 ---TG-PKVN------VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 138 ---~~-pKPe------~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
.. .||+ +++++++++++ |+||||+.+|+++| ++|||+++++.+|++..
T Consensus 122 ~~~~~~rKP~p~ml~~a~~~~~i~~~~----~~~VGD~~~Di~aA----~~AGi~~i~v~~g~~~~ 179 (209)
T d2o2xa1 122 IPDHPMRKPNPGMLVEAGKRLALDLQR----SLIVGDKLADMQAG----KRAGLAQGWLVDGEAAV 179 (209)
T ss_dssp CSSCTTSTTSCHHHHHHHHHHTCCGGG----CEEEESSHHHHHHH----HHTTCSEEEEETCCCEE
T ss_pred ccccccccccchhhhHhHHHhCCCccc----eEEeCCCHHHHHHH----HHCCCcEEEEeCCCCcc
Confidence 11 2554 55666665554 99999999999999 99999999999998643
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=2.1e-14 Score=111.67 Aligned_cols=99 Identities=17% Similarity=0.207 Sum_probs=67.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCc---------------hHHHHHHHHHhcCCCCCCCeeE-e----CCC-C--
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQ---------------SRFVETLLRELAGVTITPDRLY-G----LGT-G-- 139 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~---------------~~~~~~~L~~~~gl~~~fd~i~-~----~~~-~-- 139 (218)
+...+|||+.++|+.| +.+++|+||++ .......+.. .|+. ++.|+ | .+. .
T Consensus 27 ~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~ 103 (161)
T d2fpwa1 27 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQ--FDEVLICPHLPADECDCR 103 (161)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHH-TTCC--EEEEEEECCCGGGCCSSS
T ss_pred HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccc-cccc--cceeeecccccccccccc
Confidence 4568999999999988 57999999986 2334556666 6663 33332 2 222 1
Q ss_pred -ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 140 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 140 -pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
|+|+++.++..+...+|++|+||||+..|+++| ++|||+++++..+..
T Consensus 104 KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA----~~aG~~~i~i~~~~~ 152 (161)
T d2fpwa1 104 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLA----ENMGINGLRYDRETL 152 (161)
T ss_dssp TTSSGGGGGGC----CCGGGCEEEESSHHHHHHH----HHHTSEEEECBTTTB
T ss_pred ccccHHHHHHHHhcCCChhcEEEECCCHHHHHHH----HHcCCeEEEECCCCC
Confidence 445533333333334445599999999999999 999999999976643
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.40 E-value=1.5e-13 Score=108.81 Aligned_cols=113 Identities=16% Similarity=0.229 Sum_probs=81.7
Q ss_pred cCCCcccHHHHHHhcCCCEEEEeCCchHHHHHH-----------HHHhcCCCCCCCeeEeCCCC---ChHH----HHHHh
Q 027798 87 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETL-----------LRELAGVTITPDRLYGLGTG---PKVN----VLKQL 148 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~-----------L~~~~gl~~~fd~i~~~~~~---pKPe----~l~~l 148 (218)
...+++++.+++..+ ..+++.|+......... ++. +||..+|+.|++++.. |.|+ +++++
T Consensus 95 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~~l 172 (225)
T d2g80a1 95 KAPVYADAIDFIKRK-KRVFIYSSGSVKAQKLLFGYVQDPNAPAHDS-LDLNSYIDGYFDINTSGKKTETQSYANILRDI 172 (225)
T ss_dssp CBCCCHHHHHHHHHC-SCEEEECSSCHHHHHHHHHSBCCTTCTTSCC-BCCGGGCCEEECHHHHCCTTCHHHHHHHHHHH
T ss_pred cccchhhHHHHHhhH-HhhhhhhhccchhhhhhhhhhhhhHHHHHHh-cCCccccceeeeccccCCCCChhHhHHHHHhc
Confidence 456889999988754 46788888887655444 344 6888999999988643 4455 77778
Q ss_pred hhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
+++|++ |+||||+..|+.+| +++||++++|....+.+ .....+. ..+.++.||
T Consensus 173 g~~p~e----~l~VgD~~~Dv~~A----~~aG~~ti~v~r~g~~~--~~~~~~~--~~i~~~~eL 225 (225)
T d2g80a1 173 GAKASE----VLFLSDNPLELDAA----AGVGIATGLASRPGNAP--VPDGQKY--QVYKNFETL 225 (225)
T ss_dssp TCCGGG----EEEEESCHHHHHHH----HTTTCEEEEECCTTSCC--CCSSCCS--CEESCSTTC
T ss_pred ccCchh----ceeecCCHHHHHHH----HHcCCEEEEEeCCCCCC--CcccCCC--CccCChhhC
Confidence 876666 99999999999999 99999999997643321 1122333 345577765
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.39 E-value=5.9e-15 Score=113.70 Aligned_cols=93 Identities=18% Similarity=0.231 Sum_probs=76.7
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhc-CCCCCCCeeEeCCC-C---ChHH----HHHHhhhcCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELA-GVTITPDRLYGLGT-G---PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~-gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~~~~ 155 (218)
..+++|+.+++..+ +.+++|+||++.......+.. + |+..+|+.+++++. + |+|+ +++.++++|++
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~-~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~- 160 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEE-YPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD- 160 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGG-CHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG-
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHH-cccchhhccceeecccccccccchHHHHHHHHhcCCCCCe-
Confidence 46889999998876 579999999988877777776 5 78899999998753 3 6666 66666765555
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
|+||||+.+|+++| +++||++|+|..+
T Consensus 161 ---~l~vgDs~~di~~A----~~aG~~ti~v~~~ 187 (197)
T d2b0ca1 161 ---TVFFDDNADNIEGA----NQLGITSILVKDK 187 (197)
T ss_dssp ---EEEEESCHHHHHHH----HTTTCEEEECCST
T ss_pred ---EEEEeCCHHHHHHH----HHcCCEEEEECCC
Confidence 99999999999999 9999999999754
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.29 E-value=5.3e-13 Score=106.66 Aligned_cols=119 Identities=12% Similarity=0.195 Sum_probs=82.2
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCe---eEeCC------------C-C-ChHH-
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDR---LYGLG------------T-G-PKVN- 143 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~---i~~~~------------~-~-pKPe- 143 (218)
....+++||+.++|+.| +.+++|+||+.+..++.+|++ +|+..+|-. .+..+ . . +||+
T Consensus 71 ~~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~-l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 149 (226)
T d2feaa1 71 LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC 149 (226)
T ss_dssp HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTT-TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred HhccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHH-cCCccceeeeeEEEeCCcceeccccccccccccCCHHH
Confidence 35578999999999987 579999999999999999999 998766521 11110 0 0 3444
Q ss_pred ---HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 144 ---VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 144 ---~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++.++..+++ |+|||||.+|+.+| ++||+. +++.+ . .+..... ..+...+.|+.|+.+.|
T Consensus 150 ~~~~~~~~~~~~~~----~i~iGDs~~Dl~~a----~~A~~~-~a~~~--~-~~~~~~~-~~~~~~~~d~~~i~~~l 213 (226)
T d2feaa1 150 KPSVIHELSEPNQY----IIMIGDSVTDVEAA----KLSDLC-FARDY--L-LNECREQ-NLNHLPYQDFYEIRKEI 213 (226)
T ss_dssp HHHHHHHHCCTTCE----EEEEECCGGGHHHH----HTCSEE-EECHH--H-HHHHHHT-TCCEECCSSHHHHHHHH
T ss_pred HHHHHHHhcCCCce----EEEEeCchhhHHHH----HHCCEE-EEecc--h-HHHHHHc-CCCeeecCCHHHHHHHH
Confidence 66666665555 99999999999999 999973 33322 2 2233232 22345566888776544
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.16 E-value=1.2e-11 Score=101.22 Aligned_cols=71 Identities=23% Similarity=0.308 Sum_probs=59.7
Q ss_pred ChHH----HHHHhhhcCCCCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 140 PKVN----VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 140 pKPe----~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
|+|. ++++++++|++ |+||||+. +||.+| +++||++|+|.||+.+++++......|.+.+.++.||.
T Consensus 186 P~p~~~~~a~~~l~~~~~~----~lmVGD~~~~DI~ga----~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~ 257 (261)
T d1vjra_ 186 PNPLVVDVISEKFGVPKER----MAMVGDRLYTDVKLG----KNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELA 257 (261)
T ss_dssp TSTHHHHHHHHHHTCCGGG----EEEEESCHHHHHHHH----HHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHH
T ss_pred CcHHHHHHHHhhhccCchh----cceecCChhHHHHHH----HHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHH
Confidence 5555 77777776665 99999996 699999 99999999999999998887766655668888999999
Q ss_pred hhcC
Q 027798 215 TKLK 218 (218)
Q Consensus 215 ~~~~ 218 (218)
+.|+
T Consensus 258 ~~l~ 261 (261)
T d1vjra_ 258 KAVQ 261 (261)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9886
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.14 E-value=5.1e-13 Score=109.54 Aligned_cols=105 Identities=14% Similarity=0.099 Sum_probs=70.0
Q ss_pred CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCCCceEEEcCch-hhHHhc
Q 027798 102 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQGLRLHFVEDRL-ATLKNV 172 (218)
Q Consensus 102 ~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA 172 (218)
.....++|+.........+.. ..+..+|+.+.+++.. |+|+ ++++++.+|++ |+||||++ +||++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e----~v~IGD~~~~DI~~a 210 (250)
T d2c4na1 136 NGARFIATNPDTHGRGFYPAC-GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEE----TVIVGDNLRTDILAG 210 (250)
T ss_dssp TTCEEEESCCCSBSSTTCBCH-HHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGG----EEEEESCTTTHHHHH
T ss_pred ccccccccccccccCceeecC-cchHHHHHHhhcccchhcccchhhhHhhhhhhhcCCchh----eEEecCChHHHHHHH
Confidence 346677777664221111110 0122234444444422 6666 56666665555 99999997 599999
Q ss_pred cccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 173 IKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 173 ~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
+++||++++|.||+.+++++...+..|.+.+.++.||..
T Consensus 211 ----~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~~ 249 (250)
T d2c4na1 211 ----FQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEIDV 249 (250)
T ss_dssp ----HHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCCC
T ss_pred ----HHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhCc
Confidence 999999999999999998887766556788889999753
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.03 E-value=7.1e-11 Score=96.58 Aligned_cols=66 Identities=21% Similarity=0.298 Sum_probs=54.2
Q ss_pred ChHH----HHHHhhhcCCCCCCceEEEcCchh-hHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 140 PKVN----VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 140 pKPe----~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
|.|+ ++++++++|++ |+||||+.. ||++| +++||++|+|.+|+.+++++......|.+.+.++.||
T Consensus 181 P~p~~~~~al~~l~i~~~~----~~mIGDs~~~DI~gA----~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 181 PEAVIMNKALDRLGVKRHE----AIMVGDNYLTDITAG----IKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp TSHHHHHHHHHHHTSCGGG----EEEEESCTTTTHHHH----HHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred CCcccceehhhhccccccc----eEEEcCChHHHHHHH----HHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 6666 67777765555 999999975 99999 9999999999999988887766665566888899886
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.00 E-value=8.5e-11 Score=88.16 Aligned_cols=95 Identities=14% Similarity=0.070 Sum_probs=64.4
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHH---HHHHHHHhcC------CCCCCCeeEeCCCC---ChHH----HHHH
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRF---VETLLRELAG------VTITPDRLYGLGTG---PKVN----VLKQ 147 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~---~~~~L~~~~g------l~~~fd~i~~~~~~---pKPe----~l~~ 147 (218)
...++||+.++|+.| |.+++++||++... +...|+. .+ ...+++..+..... +++. ++..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~ 112 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM-TRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWK 112 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH-HHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHH-HhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHH
Confidence 457999999999988 67999999987432 1222221 11 23445555554433 3333 5555
Q ss_pred hhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 148 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
+...+.+ .++||||+..|+++| +++|++|+.|.||
T Consensus 113 ~~~~~~~---i~~~igD~~~dv~a~----~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 113 HIAPHFD---VKLAIDDRTQVVEMW----RRIGVECWQVASG 147 (149)
T ss_dssp HTTTTCE---EEEEEECCHHHHHHH----HHTTCCEEECSCC
T ss_pred hccCCCc---eEEEEcCCHHHHHHH----HHCCCcEEEeCCC
Confidence 5443222 267889999999999 9999999999998
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.95 E-value=1.3e-10 Score=94.74 Aligned_cols=66 Identities=18% Similarity=0.299 Sum_probs=53.9
Q ss_pred ChHH----HHHHhhhcCCCCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 140 PKVN----VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 140 pKPe----~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
|+|+ ++++++++|++ |+||||+. +||++| ++|||++++|.+|+..++++......|.+.+.++.||
T Consensus 181 P~~~~~~~~~~~~gi~~~~----~l~IGD~~~~DI~~a----~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 181 PKAIIMERAIAHLGVEKEQ----VIMVGDNYETDIQSG----IQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp TSHHHHHHHHHHHCSCGGG----EEEEESCTTTHHHHH----HHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred cchhHHHHHHHHhCCCccc----eEEecCChHHHHHHH----HHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence 6776 66666665554 99999997 599999 9999999999999988777766666666888899986
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=3.4e-09 Score=84.68 Aligned_cols=114 Identities=11% Similarity=0.251 Sum_probs=77.0
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEe-------------CCCC-------ChHH
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-------------LGTG-------PKVN 143 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~-------------~~~~-------pKPe 143 (218)
...++||+.++|+.| |.+++|+|++....++.+++. +|+..+ .+++ .... .|.+
T Consensus 80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~-lgi~~~--~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~ 156 (217)
T d1nnla_ 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPAT--NVFANRLKFYFNGEYAGFDETQPTAESGGKGK 156 (217)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGG--GEEEECEEECTTSCEEEECTTSGGGSTTHHHH
T ss_pred ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHH-hCCccc--ceeeeeeeeeehhccccceeeeeeeccchHHH
Confidence 457999999999987 579999999999999999999 998742 1221 1111 2334
Q ss_pred HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
+++.+.. +.++++|+||||+.+|+.++ +.||+. + .+|.+.........++ +.+.++.||.
T Consensus 157 ~v~~~~~--~~~~~~~~~vGDs~~Di~~~----~~ag~~-v--a~~~~~~~~~~~~~ad--~~i~~f~ell 216 (217)
T d1nnla_ 157 VIKLLKE--KFHFKKIIMIGDGATDMEAC----PPADAF-I--GFGGNVIRQQVKDNAK--WYITDFVELL 216 (217)
T ss_dssp HHHHHHH--HHCCSCEEEEESSHHHHTTT----TTSSEE-E--EECSSCCCHHHHHHCS--EEESCGGGGC
T ss_pred HHHHHHh--ccCccccEEEEeCHhhHHHH----HhCCce-E--EECCCHHHHHHHHhCC--CEeCCHHHhc
Confidence 6665532 23445599999999999999 999974 3 3343322222223455 4455777763
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.82 E-value=4e-09 Score=81.49 Aligned_cols=122 Identities=12% Similarity=0.049 Sum_probs=86.9
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--------------ChHHHHHHh
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--------------PKVNVLKQL 148 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--------------pKPe~l~~l 148 (218)
....+++|+.+.++.+ +..++++|++....+....++ .++..++...+..+.. +++..+..+
T Consensus 72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (210)
T d1j97a_ 72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI 150 (210)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhc-cchhhhhhhhhccccccccccccccccccccccchhhhH
Confidence 4568999999999887 569999999999999999998 8887776655433221 344433333
Q ss_pred hhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
......+++++++|||+.+|+.++ +.||+. |++ + + .+.+. ..+++++.-.|+.++.+.||
T Consensus 151 ~~~~~~~~~~~i~iGDs~nDi~m~----~~ag~~-va~--n-a-~~~lk-~~Ad~vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 151 AKIEGINLEDTVAVGDGANDISMF----KKAGLK-IAF--C-A-KPILK-EKADICIEKRDLREILKYIK 210 (210)
T ss_dssp HHHHTCCGGGEEEEESSGGGHHHH----HHCSEE-EEE--S-C-CHHHH-TTCSEEECSSCGGGGGGGCC
T ss_pred HHHhcccccceEEecCCcChHHHH----HHCCCC-EEE--C-C-CHHHH-HhCCEEEcCCCHHHHHHHhC
Confidence 333334445599999999999999 999985 334 2 2 33443 35676666558889998886
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.19 E-value=1.7e-06 Score=68.29 Aligned_cols=88 Identities=23% Similarity=0.199 Sum_probs=61.9
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCch------------HHHHHHHHHhcCCCCCCCeeEeCC-CC---ChHHHHHHhhh
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLG-TG---PKVNVLKQLQK 150 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~------------~~~~~~L~~~~gl~~~fd~i~~~~-~~---pKPe~l~~l~~ 150 (218)
++|+|.+.|+.| +..++|+||.+. ...+.+++. +++. ++..+|.. .. |+|.++..+..
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~-l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHH-cCCC--ccEEEecCccccCCCccHHHHHHHH
Confidence 579999999988 579999999753 234556666 6653 34444433 22 55556666544
Q ss_pred cC----CCCCCceEEEcCc-----------------hhhHHhccccccccCccEE
Q 027798 151 KP----EHQGLRLHFVEDR-----------------LATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 151 ~~----~~~~~e~l~IGDs-----------------~~Di~aA~~~~~~aGi~~i 184 (218)
+. ..+.++++||||. -.|++.| +++|++++
T Consensus 128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA----~N~gikF~ 178 (195)
T d1yj5a1 128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFA----LNVGLPFA 178 (195)
T ss_dssp TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHH----HHHTCCEE
T ss_pred HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHH----HHCCCccc
Confidence 43 3566789999995 3899999 99999864
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.98 E-value=3.1e-05 Score=64.36 Aligned_cols=87 Identities=15% Similarity=0.215 Sum_probs=60.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC-----CCC-------------ChHH-H
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-----GTG-------------PKVN-V 144 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~-----~~~-------------pKPe-~ 144 (218)
...+.||+.++++.| +++++|+|++-...++.++++ +|+...=-.|++. +.+ .|-+ +
T Consensus 133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~-lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~ 211 (291)
T d2bdua1 133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 211 (291)
T ss_dssp CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHH-TTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-cCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence 467999999999988 579999999999999999999 8875311135542 111 2223 2
Q ss_pred H---HHhhhcCCCCCCceEEEcCchhhHHhccccccccC
Q 027798 145 L---KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 145 l---~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aG 180 (218)
+ ..+... .+...+++|||+.+|+.+| +.+.
T Consensus 212 ~~~~~~~~~~--~~~~~vI~iGDs~~Dl~Ma----~g~~ 244 (291)
T d2bdua1 212 LKNTDYFSQL--KDNSNIILLGDSQGDLRMA----DGVA 244 (291)
T ss_dssp HTTHHHHHHT--TTCCEEEEEESSSGGGGTT----TTCS
T ss_pred hhhHHHHhcc--CCcCcEEEEeCCHhHHHHH----hCCc
Confidence 1 222221 1334599999999999999 6543
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.97 E-value=9.8e-06 Score=60.01 Aligned_cols=111 Identities=19% Similarity=0.181 Sum_probs=76.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
.+-|++.+.++.| |+++.|+|+.....++.+-+. +|| +.+++.-.. .|...++.+... +. +.||||
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~-lgI----~~v~~~~~p~~k~~~v~~~q~~-~~----v~~vGD 90 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNL----DLVIAEVLPHQKSEEVKKLQAK-EV----VAFVGD 90 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTC----SEEECSCCHHHHHHHHHHHTTT-SC----EEEEEC
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhh-hhh----hhhccccchhHHHHHHHHHHcC-CE----EEEEeC
Confidence 5788998888876 679999999999999999999 998 445555432 555677776543 33 899999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
..+|..+- +.|++- +.+.. ++ +.....++.++.-.++..+.+.||
T Consensus 91 g~nD~~aL----~~Advg-ia~~~--~~--~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 91 GINDAPAL----AQADLG-IAVGS--GS--DVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp SSSSHHHH----HHSSEE-EEECC--C----------SEEESSCCTHHHHHHHC
T ss_pred CCCcHHHH----HhCCee-eecCc--cC--HHHHHhCCEEEECCCHHHHHHHhC
Confidence 99999998 899863 33332 22 233445664444457888877664
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=97.82 E-value=2.9e-05 Score=61.53 Aligned_cols=94 Identities=12% Similarity=0.015 Sum_probs=66.1
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchH---HHHHHH-HHhcCCC--CCCCeeEeCCCC---ChHHHHHHhhhcC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSR---FVETLL-RELAGVT--ITPDRLYGLGTG---PKVNVLKQLQKKP 152 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~---~~~~~L-~~~~gl~--~~fd~i~~~~~~---pKPe~l~~l~~~~ 152 (218)
.....+.||+.++|+.+ |.+++.|||.... .+...| +. +|+. ..-+.++..+.. .|-..++. .
T Consensus 82 ~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~-lG~p~~~~~~vll~~~~~~K~~rr~~Ik~----y 156 (209)
T d2b82a1 82 DEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADN-FHIPATNMNPVIFAGDKPGQNTKSQWLQD----K 156 (209)
T ss_dssp GGGCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHH-TTCCTTTBCCCEECCCCTTCCCSHHHHHH----T
T ss_pred ccccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHH-cCCCcccccceEeeCCCCCchHHHHHHHH----c
Confidence 34456889999999977 6899999998753 333444 55 7773 333444544322 44445555 4
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
.. .+|+||...|+.+| +.+|+++|-+....+
T Consensus 157 ~I----~l~~GD~l~Df~aA----~eagi~~iRi~r~~~ 187 (209)
T d2b82a1 157 NI----RIFYGDSDNDITAA----RDVGARGIRILRASN 187 (209)
T ss_dssp TE----EEEEESSHHHHHHH----HHTTCEEEECCCCTT
T ss_pred Ce----EEEecCCHHHHhHH----HHcCCCceEeeccCC
Confidence 45 89999999999999 999999998854433
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.71 E-value=8.4e-05 Score=56.12 Aligned_cols=117 Identities=9% Similarity=0.084 Sum_probs=78.9
Q ss_pred hcCCCcccHHHHHHhc--CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-CC-------ChHH----HHHHhhhc
Q 027798 86 GANRLYPGVSDALKLA--SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TG-------PKVN----VLKQLQKK 151 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L--~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-~~-------pKPe----~l~~l~~~ 151 (218)
.....+++....+..+ +.+.+++|.+........... +++..++....... .. +++. .++.++..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 144 (206)
T d1rkua_ 66 ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TTCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred hhccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHH-hCCchhhcceeeeecccccccccccchhhHHHHHHHhccc
Confidence 3456788888777655 458899999999999999888 88765543322211 11 2222 77777876
Q ss_pred CCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 152 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++ +++|||+.+|+.+. +.||+-+ ++ + . .+++....++ ++...|.+|+.+.|
T Consensus 145 ~~e----viaiGDg~NDi~Ml----~~Ag~gI-Am--n-a-~~~v~~~~~~-~~~~~~~~d~~~~~ 196 (206)
T d1rkua_ 145 YYR----VIAAGDSYNDTTML----SEAHAGI-LF--H-A-PENVIREFPQ-FPAVHTYEDLKREF 196 (206)
T ss_dssp TCE----EEEEECSSTTHHHH----HHSSEEE-EE--S-C-CHHHHHHCTT-SCEECSHHHHHHHH
T ss_pred ccc----eEEecCCccCHHHH----HhCCccE-EE--C-C-CHHHHHhCCC-ceeecCHHHHHHHH
Confidence 666 99999999999999 9999843 33 3 2 3444443444 33456888887643
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.53 E-value=5.2e-05 Score=66.54 Aligned_cols=88 Identities=19% Similarity=0.229 Sum_probs=65.7
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhc--------CCCCCCCeeEeCCCCChHH----------------
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELA--------GVTITPDRLYGLGTGPKVN---------------- 143 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~--------gl~~~fd~i~~~~~~pKPe---------------- 143 (218)
=|.+..+|+.| |.++.++||++-.+++..++..+ .+.++||.|+.... ||.
T Consensus 187 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~--KP~FF~~~~~~~~v~~~~g 264 (458)
T d2bdea1 187 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLAN--KPRFFYDNLRFLSVNPENG 264 (458)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCC--HHHHHHSCCCEEEECTTTC
T ss_pred ChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCC--CCCccCCCCcceEEeCCCC
Confidence 36677777776 56999999999999999998766 56789999986532 221
Q ss_pred ---------------------HHHHhhhcCCCCCCceEEEcCchh-hHHhccccccccCccEEEEe
Q 027798 144 ---------------------VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 144 ---------------------~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~~~~~~aGi~~i~v~ 187 (218)
..+.++. .+.+++||||+.. ||..+ + +..|+.+++|-
T Consensus 265 ~l~~~~~~~~~~vY~gGn~~~l~~llg~----~g~~VLY~GDhi~~Di~~~-k--k~~gWrT~~Ii 323 (458)
T d2bdea1 265 TMTNVHGPIVPGVYQGGNAKKFTEDLGV----GGDEILYIGDHIYGDILRL-K--KDCNWRTALVV 323 (458)
T ss_dssp CEEECCSCCCSEEEEECCHHHHHHHTTC----CGGGEEEEESSCCSCHHHH-H--HHHCSEEEEEC
T ss_pred ccccCCccccCCccccCCHHHHHHHhCC----CCCcEEEECCccchhhhhh-h--hhcCCceEEeh
Confidence 3344444 3345999999985 98877 1 46799999996
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.47 E-value=0.00026 Score=53.85 Aligned_cols=115 Identities=15% Similarity=0.125 Sum_probs=77.1
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCe---------------------------eEeCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDR---------------------------LYGLGT 138 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~---------------------------i~~~~~ 138 (218)
+|.|++.++++.| |+++.++|+-+...+..+-+. +||...-.. +++.-.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~-~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHH-cCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 5778998888876 689999999999999999999 998533221 233222
Q ss_pred C-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 139 G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 139 ~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
. .|-.+++.++..... +.|+||..+|..+= +.|.+ .|++ |.++ +.....++.++.-.++..+.+.|
T Consensus 99 p~~K~~lv~~l~~~g~~----Va~vGDG~nD~~AL----~~Adv-GIa~--~~gt--~~a~~aAdivl~~~~l~~v~~~I 165 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEI----TAMTGDGVNDAPAL----KKAEI-GIAM--GSGT--AVAKTASEMVLADDNFSTIVAAV 165 (168)
T ss_dssp HHHHHHHHHHHHHTTCC----EEEEECSGGGHHHH----HHSSE-EEEE--TTSC--HHHHHTCSEEETTCCTHHHHHHH
T ss_pred hhHHHHHHHHHHhcccc----eeEEecCCCCHHHH----HhCCE-EEEe--cccc--HHHHHhCCEEEccCCHHHHHHHH
Confidence 1 233377777766566 99999999999998 89885 3333 3333 23333455333333576666554
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.15 E-value=0.00078 Score=51.50 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=55.9
Q ss_pred HHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccc
Q 027798 96 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 96 e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~ 175 (218)
..|+..+..++++|......+....+. +++.. ++.... +|...++.+..+...++++++||||..+|+.+-
T Consensus 42 ~~l~~~gi~~~iis~~~~~~v~~~~~~-l~~~~----~~~~~~-~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l--- 112 (177)
T d1k1ea_ 42 KMLMDADIQVAVLSGRDSPILRRRIAD-LGIKL----FFLGKL-EKETACFDLMKQAGVTAEQTAYIGDDSVDLPAF--- 112 (177)
T ss_dssp HHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCE----EEESCS-CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH---
T ss_pred HHHhhhcEEEEEecCCchhHHHHHHhh-hcccc----cccccc-cHHHHHHHHHHHhcCCcceeEEecCCccHHHHH---
Confidence 456667889999999999999888888 77643 232222 566644444333344555599999999999999
Q ss_pred ccccCcc
Q 027798 176 PELDGWN 182 (218)
Q Consensus 176 ~~~aGi~ 182 (218)
+.+|+.
T Consensus 113 -~~~g~s 118 (177)
T d1k1ea_ 113 -AACGTS 118 (177)
T ss_dssp -HHSSEE
T ss_pred -hhCCeE
Confidence 999974
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.73 E-value=0.00066 Score=51.88 Aligned_cols=73 Identities=11% Similarity=0.054 Sum_probs=46.4
Q ss_pred chHHHHHHHHHhcCCCCCCCeeEeC---C---CC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEE
Q 027798 112 QSRFVETLLRELAGVTITPDRLYGL---G---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 112 ~~~~~~~~L~~~~gl~~~fd~i~~~---~---~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
..+.++.++++ ++....+ ..+. + .+ +|+.+++.+....+.+++++++|||+.+|+.+. +.+|+ +|
T Consensus 120 ~~~~~~~~~~~-~~~~~~~--~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml----~~ag~-~v 191 (230)
T d1wr8a_ 120 NVETVREIINE-LNLNLVA--VDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAF----KVVGY-KV 191 (230)
T ss_dssp CHHHHHHHHHH-TTCSCEE--EECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHH----HHSSE-EE
T ss_pred cHHHHHHHHHH-hccceEE--eeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHH----HHCCe-EE
Confidence 45567777887 6543211 1111 1 12 888866665555555666699999999999999 99996 34
Q ss_pred EEeCCCCCHH
Q 027798 185 LVDWGYNTPK 194 (218)
Q Consensus 185 ~v~~G~~~~~ 194 (218)
++ |..+++
T Consensus 192 av--~na~~~ 199 (230)
T d1wr8a_ 192 AV--AQAPKI 199 (230)
T ss_dssp EC--TTSCHH
T ss_pred EE--CCCCHH
Confidence 44 444443
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.71 E-value=0.00089 Score=51.79 Aligned_cols=65 Identities=9% Similarity=-0.087 Sum_probs=42.6
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
.|..+++.+....+.+++++++|||+.+|+.+. +.+|. +|+| +...+ .++. .++++..-.+..-+
T Consensus 151 ~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~----~~a~~-~vav--~na~~-~~k~-~ad~v~~~~~~~gi 215 (225)
T d1l6ra_ 151 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMF----QLPVR-KACP--ANATD-NIKA-VSDFVSDYSYGEEI 215 (225)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHH----TSSSE-EEEC--TTSCH-HHHH-HCSEECSCCTTHHH
T ss_pred chHHHHHHHhhhhccchhheeeecCCcchHHHH----HHCCe-EEEE--CCCcH-HHHH-hCCEEECCCCcCHH
Confidence 677777776666666777799999999999999 99996 4444 33344 3433 35544433333333
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.12 E-value=0.0034 Score=47.74 Aligned_cols=108 Identities=16% Similarity=0.064 Sum_probs=68.3
Q ss_pred hhcCCCcccHHHHHHhcC---C-CEEEEeCCchH------HHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCC
Q 027798 85 IGANRLYPGVSDALKLAS---S-RIYIVTSNQSR------FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEH 154 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L~---~-~l~IvTn~~~~------~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~ 154 (218)
....+|+||+.++|+.|. . .+.|+|+.+.. ....=|++ .......+.++.+.+ |- .. ..
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~-~~~~~~~~~~~~t~~--K~------~~--~~ 138 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEK-YFGPDFLEQIVLTRD--KT------VV--SA 138 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHH-HHCGGGGGGEEECSC--ST------TS--CC
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHH-hcCCCCccEEEEccc--cc------ee--cC
Confidence 356789999999999873 3 57788886532 12233555 322223333333322 21 11 12
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
-++|+|++..+.++ .++|+++|.....|+... ..+..+..+.+..|..+
T Consensus 139 ----d~lIDD~p~n~~~~----~~~g~~~il~~~~~N~~~----~~~~~~~Rv~~W~e~~~ 187 (195)
T d1q92a_ 139 ----DLLIDDRPDITGAE----PTPSWEHVLFTACHNQHL----QLQPPRRRLHSWADDWK 187 (195)
T ss_dssp ----SEEEESCSCCCCSC----SSCSSEEEEECCTTTTTC----CCCTTCEEECCTTSCHH
T ss_pred ----eEEecCcHHHHHHH----hcCCCeEEEECCCcccCC----CCCCCceeeCCHHHHHH
Confidence 38999999999999 999999999998887531 12334566667777544
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.46 E-value=0.039 Score=44.18 Aligned_cols=45 Identities=13% Similarity=0.310 Sum_probs=38.2
Q ss_pred CCCcccHHHHHHhcCC--CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC
Q 027798 88 NRLYPGVSDALKLASS--RIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 136 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~~--~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~ 136 (218)
..+-||+.++|+.++. +.+|+|++-+++++++.++ .|+ +++ +++.
T Consensus 80 ~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~-~gf--p~e-~~~T 126 (308)
T d1y8aa1 80 AKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASM-IGV--RGE-LHGT 126 (308)
T ss_dssp CCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTC--CSE-EEEE
T ss_pred eeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhh-cCC--Cce-eecc
Confidence 5789999999999974 8899999999999999999 888 344 5554
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.71 E-value=0.005 Score=46.81 Aligned_cols=87 Identities=10% Similarity=-0.006 Sum_probs=63.3
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--ChHH---HHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVN---VLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKPe---~l~~l~~~~~~~~~e~l 160 (218)
+..-||+.++|+.+. ..++|.|.+++++++.+++. +.-...|...+..+.. .+.. -+..++.. .+.++
T Consensus 54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~-ldp~~~~~~~~~r~~c~~~~~~~~KdL~~l~~~----l~~vv 128 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGNYVKDLSRLGRD----LRRVL 128 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCSSCCEEEEECGGGSEEETTEEECCGGGSCSC----GGGEE
T ss_pred EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHH-hccCCceeEEEEeeeeeecCCcccccHhhcCCC----HHHeE
Confidence 346899999999984 69999999999999999999 8877777777665543 2222 33334433 34499
Q ss_pred EEcCchhhHHhccccccccCccE
Q 027798 161 FVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
+|+|++.-...- -..|+.+
T Consensus 129 ivDd~~~~~~~~----~~N~I~I 147 (181)
T d1ta0a_ 129 ILDNSPASYVFH----PDNAVPV 147 (181)
T ss_dssp EECSCGGGGTTC----GGGBCCC
T ss_pred EEcCChhhhhcC----ccCeeEe
Confidence 999999866554 4566654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.31 E-value=0.031 Score=42.40 Aligned_cols=64 Identities=16% Similarity=0.065 Sum_probs=40.0
Q ss_pred ChHHHHHHhhhcC-CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 140 PKVNVLKQLQKKP-EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 140 pKPe~l~~l~~~~-~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
.|-.+++.+.... ...++++++|||+.+|+.+- +.+|. ++++..+ +.+ + .-.+.++.|..++||
T Consensus 179 ~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml----~~a~~-~va~~Na--~~~-~-------~~~~~~i~~~~~~i~ 243 (243)
T d1wzca1 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMF----EVVDK-VFIVGSL--KHK-K-------AQNVSSIIDVLEVIK 243 (243)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHH----TTSSE-EEEESSC--CCT-T-------CEEESCHHHHHHHHT
T ss_pred ccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHH----HcCCc-EEEeCCC--ChH-H-------HhhhhHHHHHHHhhC
Confidence 6666444432222 23445599999999999999 99995 5556543 211 1 123557888887775
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=93.82 E-value=0.017 Score=45.16 Aligned_cols=45 Identities=4% Similarity=-0.134 Sum_probs=33.6
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
.|-.+++.+....+.+++++++|||+.+|+.+- +.+|. +++|..+
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml----~~a~~-svav~na 230 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISML----RHAAI-GVAMGQA 230 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH----HHSSE-EEECTTS
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHH----HhCCe-EEEeCCC
Confidence 676666666554455556699999999999999 99998 5666543
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=93.74 E-value=0.062 Score=41.89 Aligned_cols=45 Identities=22% Similarity=0.068 Sum_probs=33.5
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
.|-.+++.+....+.+++++++|||+.||+.+. +.+|. +|++..+
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml----~~a~~-svam~na 257 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSML----EAAGK-GVAMGNA 257 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHH----HHSSE-EEECTTC
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHH----HhCCe-EEEeCCC
Confidence 566666666555555666699999999999999 99995 4566554
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=93.20 E-value=0.16 Score=39.06 Aligned_cols=45 Identities=13% Similarity=0.028 Sum_probs=34.1
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
.|..+++.+....+.+++++++|||+.+|+.+- +.+|. ++++..+
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml----~~a~~-~va~~na 251 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAML----SNFKY-SFAVANA 251 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH----HSCSE-EEECTTC
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHH----HhCCc-EEEeCCC
Confidence 677766666655566666799999999999999 99996 4555443
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=93.17 E-value=0.03 Score=41.99 Aligned_cols=29 Identities=10% Similarity=-0.047 Sum_probs=23.7
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeC
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 188 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~ 188 (218)
+++++++|||+.+|+.+- +.+|. +|+|..
T Consensus 202 ~~~~~iafGD~~NDl~Ml----~~a~~-~vaV~n 230 (232)
T d1xvia_ 202 KRPTTLGLGDGPNDAPLL----EVMDY-AVIVKG 230 (232)
T ss_dssp SCCEEEEEESSGGGHHHH----HTSSE-EEECCC
T ss_pred ChhcEEEEcCCHhHHHHH----HhCCe-EEEEeC
Confidence 444499999999999999 99997 666653
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=93.08 E-value=0.024 Score=44.15 Aligned_cols=44 Identities=11% Similarity=0.134 Sum_probs=30.5
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 188 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~ 188 (218)
.|-.+++.+....+.+++++++|||+.+|+.+- +.+|.. +++..
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml----~~ag~~-vam~N 233 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEML----KMARYS-FAMGN 233 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH----HHCSEE-EECTT
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHH----HhCCeE-EEeCC
Confidence 466655554444444555599999999999999 888874 33543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=91.95 E-value=0.061 Score=41.19 Aligned_cols=43 Identities=16% Similarity=0.025 Sum_probs=33.1
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.+....+.+++++++|||+.+|+.+- +.+|. ++++.
T Consensus 162 ~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml----~~~~~-~vav~ 204 (244)
T d1s2oa1 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLF----ETSAR-GVIVR 204 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH----TSSSE-EEECT
T ss_pred chhHHHHHHHHhccCChhhEEEEcCCCCCHHHH----hhCCc-EEEeC
Confidence 566677777666666667799999999999999 89885 44554
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=91.79 E-value=0.048 Score=42.56 Aligned_cols=44 Identities=16% Similarity=0.098 Sum_probs=31.8
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 188 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~ 188 (218)
.|-.+++.+......+++++++|||+.+|+.+- +.+|. ++++..
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml----~~~~~-sva~~n 233 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMF----EEAGL-RVAMEN 233 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHH----TTCSE-EEECTT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHH----HhCCc-EEEeCC
Confidence 677766555444445555699999999999999 99996 445543
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=91.37 E-value=0.052 Score=42.08 Aligned_cols=43 Identities=19% Similarity=0.101 Sum_probs=30.5
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.+......+++++++|||+.+|+.+- +.+|. ++++.
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml----~~~~~-~~am~ 239 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMI----EYAGV-GVAVD 239 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH----HHSSE-EEECT
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHH----HhCCc-EEEeC
Confidence 566655555444444555599999999999999 99995 44554
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=90.03 E-value=0.19 Score=37.11 Aligned_cols=60 Identities=10% Similarity=0.097 Sum_probs=38.9
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.|-.+++.+... .+ +++|||+.+|+.+= +.+|. +++|.-|-. ...+. +.+.+..|..++|
T Consensus 159 ~Kg~al~~l~~~-~~----~i~~GDs~ND~~Mf----~~~~~-~~av~~g~~------~~~A~--~~~~~~~ev~~~l 218 (229)
T d1u02a_ 159 NKGSAIRSVRGE-RP----AIIAGDDATDEAAF----EANDD-ALTIKVGEG------ETHAK--FHVADYIEMRKIL 218 (229)
T ss_dssp CHHHHHHHHHTT-SC----EEEEESSHHHHHHH----HTTTT-SEEEEESSS------CCCCS--EEESSHHHHHHHH
T ss_pred CHHHHHHHHhcc-cc----ceeecCCCChHHHH----hccCC-eEEEEeCCC------CccCe--EEcCCHHHHHHHH
Confidence 677788888642 33 99999999999998 77764 445554522 12333 5555666655544
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.05 E-value=0.27 Score=36.34 Aligned_cols=41 Identities=15% Similarity=-0.010 Sum_probs=33.6
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCch----hhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRL----ATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~----~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.|.. .+++++++|||+. ||+++= +.+|..+++|.
T Consensus 185 sKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml----~~a~~~~~av~ 229 (244)
T d2fuea1 185 DKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIF----ADPRTVGHSVV 229 (244)
T ss_dssp STTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHH----HSTTSEEEECS
T ss_pred cHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHH----HcCCCcEEEcC
Confidence 66678888753 3667899999985 999999 99998888876
|