Citrus Sinensis ID: 027821
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 218 | ||||||
| 255541628 | 268 | conserved hypothetical protein [Ricinus | 1.0 | 0.813 | 0.889 | 1e-106 | |
| 358249046 | 268 | uncharacterized protein LOC100810003 [Gl | 1.0 | 0.813 | 0.844 | 1e-106 | |
| 224127704 | 268 | predicted protein [Populus trichocarpa] | 1.0 | 0.813 | 0.866 | 1e-104 | |
| 388500274 | 268 | unknown [Lotus japonicus] | 1.0 | 0.813 | 0.839 | 1e-100 | |
| 449441454 | 268 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.813 | 0.862 | 2e-99 | |
| 357507383 | 268 | hypothetical protein MTR_7g077870 [Medic | 1.0 | 0.813 | 0.811 | 2e-98 | |
| 297824659 | 268 | hypothetical protein ARALYDRAFT_904052 [ | 1.0 | 0.813 | 0.821 | 1e-97 | |
| 225454274 | 268 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.813 | 0.848 | 4e-97 | |
| 18406942 | 268 | uncharacterized protein [Arabidopsis tha | 1.0 | 0.813 | 0.816 | 4e-96 | |
| 147782417 | 275 | hypothetical protein VITISV_002394 [Viti | 1.0 | 0.792 | 0.817 | 9e-94 |
| >gi|255541628|ref|XP_002511878.1| conserved hypothetical protein [Ricinus communis] gi|223549058|gb|EEF50547.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/218 (88%), Positives = 212/218 (97%)
Query: 1 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
M I+RPVVETGYENLLLVRLLLE+RMPSIRKSSV+EGLTVEGILENWSK+KPVIME+W E
Sbjct: 51 MFIVRPVVETGYENLLLVRLLLEMRMPSIRKSSVAEGLTVEGILENWSKLKPVIMEEWGE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
+RD+L+ LFGK+RDEWMDKDL TWI ANRFYPG+PDALKFASSRIYIVTTKQSRFADALL
Sbjct: 111 DRDSLIHLFGKIRDEWMDKDLATWIAANRFYPGVPDALKFASSRIYIVTTKQSRFADALL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180
RELAG+TIPP++IYGLGTGPKV+VLKQLQ+KPE QG+TLHFVEDRLATLKNVIKEPELDG
Sbjct: 171 RELAGLTIPPEKIYGLGTGPKVKVLKQLQEKPEYQGLTLHFVEDRLATLKNVIKEPELDG 230
Query: 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
WNLYLGDWGYNTQKEREEAASIPRI+LLQLSDFS+KLK
Sbjct: 231 WNLYLGDWGYNTQKEREEAASIPRIRLLQLSDFSKKLK 268
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358249046|ref|NP_001239728.1| uncharacterized protein LOC100810003 [Glycine max] gi|255647823|gb|ACU24371.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/218 (84%), Positives = 205/218 (94%)
Query: 1 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
MH +RPVVETGYEN+LLVRLLLE R P+IRKSSV+EGLTVEGILENWSK+KP+IME+W E
Sbjct: 51 MHTVRPVVETGYENVLLVRLLLESRTPTIRKSSVAEGLTVEGILENWSKLKPIIMEEWDE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
RD L+DLFGKVRDEW+++D TWIGANR YPG+ DALKFASSR+YIVTTKQSRFADALL
Sbjct: 111 KRDDLIDLFGKVRDEWLEQDFATWIGANRLYPGVSDALKFASSRVYIVTTKQSRFADALL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180
RELAGVTIPP+RIYGLGTGPKVEVLKQLQKKPE QG+TLHFVEDRLATLKNVIKEPELD
Sbjct: 171 RELAGVTIPPERIYGLGTGPKVEVLKQLQKKPEHQGLTLHFVEDRLATLKNVIKEPELDQ 230
Query: 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
WNLYLG+WGYNTQKEREEAA+IPRI +L+LS+FS+KLK
Sbjct: 231 WNLYLGNWGYNTQKEREEAAAIPRIHVLELSNFSKKLK 268
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127704|ref|XP_002320140.1| predicted protein [Populus trichocarpa] gi|222860913|gb|EEE98455.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/218 (86%), Positives = 209/218 (95%)
Query: 1 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
MHI+RPVVETGYENLLLVRLLLE+R+PSIRKSSV+EGLTV+GIL+NWSKIKPVIME+W+E
Sbjct: 51 MHIVRPVVETGYENLLLVRLLLEMRIPSIRKSSVAEGLTVDGILDNWSKIKPVIMEEWAE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
NRDAL++LFGKVRDEWMD DL TWIGANRFYPG+PDALKFASS IYIVTTKQSRFADALL
Sbjct: 111 NRDALIELFGKVRDEWMDNDLATWIGANRFYPGVPDALKFASSSIYIVTTKQSRFADALL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180
+ELAG+ IPP+RIYGLGTGPKVEVLKQLQ+KPE QG+ LHFVEDRLATLKNVIK+PELDG
Sbjct: 171 QELAGLKIPPERIYGLGTGPKVEVLKQLQRKPEHQGLKLHFVEDRLATLKNVIKDPELDG 230
Query: 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
WNLYLGDWGYNT +ER EAASIPRI LLQL+DFS+KLK
Sbjct: 231 WNLYLGDWGYNTHQERGEAASIPRITLLQLTDFSKKLK 268
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500274|gb|AFK38203.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/218 (83%), Positives = 205/218 (94%)
Query: 1 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
MH +RPVVETGYENLLLVRLLLE R PSIRKSSV+EGLTV+GILE WSK+KPVIME+W E
Sbjct: 51 MHAVRPVVETGYENLLLVRLLLETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
NRDAL+DLFGKVRDEW++++ TWIGANR YPG+ DALKFASSR+YIVTTKQSRFADA+L
Sbjct: 111 NRDALIDLFGKVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTKQSRFADAIL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180
RELAGVTIPP+RIYGLG+GPKVEVLKQLQKKPE QG TLHFVEDRLATLKNVIKEPELD
Sbjct: 171 RELAGVTIPPERIYGLGSGPKVEVLKQLQKKPEHQGPTLHFVEDRLATLKNVIKEPELDQ 230
Query: 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
WNLYLG+WGYNT+KE+EEAA+I RIQ+L+LSDFS+KLK
Sbjct: 231 WNLYLGNWGYNTRKEKEEAAAISRIQVLELSDFSKKLK 268
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441454|ref|XP_004138497.1| PREDICTED: uncharacterized protein LOC101221288 [Cucumis sativus] gi|449529778|ref|XP_004171875.1| PREDICTED: uncharacterized LOC101221288 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/218 (86%), Positives = 204/218 (93%)
Query: 1 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
M+ +RPVVETGYENLLLVRLLLE+R+PSIRKSSV+EGLTV GILENWSK+KPVIME+W E
Sbjct: 51 MYTVRPVVETGYENLLLVRLLLEMRLPSIRKSSVAEGLTVHGILENWSKLKPVIMEEWGE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
NRDAL+DLFGKVRD+W+D+DL TWIGANRFYPG+ DALKFASSRIYIVTTKQ RFADALL
Sbjct: 111 NRDALIDLFGKVRDQWIDEDLATWIGANRFYPGVSDALKFASSRIYIVTTKQGRFADALL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180
RELAGVTIPP+RIYGLGTGPKVEVLK LQK PE QG+ LHFVEDRLATLKNVIKE ELDG
Sbjct: 171 RELAGVTIPPERIYGLGTGPKVEVLKMLQKMPEHQGLKLHFVEDRLATLKNVIKESELDG 230
Query: 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
WN+YL DWGYNTQKEREEAA+I RIQLLQLSDFS KLK
Sbjct: 231 WNIYLVDWGYNTQKEREEAAAIKRIQLLQLSDFSTKLK 268
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507383|ref|XP_003623980.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|217073782|gb|ACJ85251.1| unknown [Medicago truncatula] gi|355498995|gb|AES80198.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|388518891|gb|AFK47507.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/218 (81%), Positives = 203/218 (93%)
Query: 1 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
MH +RPVVETGYENLLLVRLLLE R PSIRKSSV+EGL VEGILE+WS +KP+IME+W E
Sbjct: 51 MHTVRPVVETGYENLLLVRLLLETRTPSIRKSSVAEGLAVEGILESWSTLKPIIMEEWGE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
NR+AL+DLFGKVRDEW+++D WIGANR YPG+ DALKFASS+++IVTTKQSRFADALL
Sbjct: 111 NREALIDLFGKVRDEWLEQDFAAWIGANRIYPGVSDALKFASSKVFIVTTKQSRFADALL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180
RELAGVTIP +RIYGLGTGPKVE+LKQLQK+PE QG+TLHFVEDRLATLKNVIKEPELD
Sbjct: 171 RELAGVTIPSERIYGLGTGPKVEILKQLQKRPEHQGLTLHFVEDRLATLKNVIKEPELDK 230
Query: 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
WNLYLG+WGYNT +E+EEAA+IPRI++LQLSDFS+KLK
Sbjct: 231 WNLYLGNWGYNTAQEKEEAAAIPRIRVLQLSDFSKKLK 268
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297824659|ref|XP_002880212.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] gi|297326051|gb|EFH56471.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/218 (82%), Positives = 204/218 (93%)
Query: 1 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
MHI+RPVVETGYENLLLVRLLLE R+PSIRKSSV+EGLTV+GILE+W+KIKPVIME W E
Sbjct: 51 MHIVRPVVETGYENLLLVRLLLETRIPSIRKSSVAEGLTVDGILESWAKIKPVIMEAWDE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
++DAL+DLFGKVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTKQ RFA+ALL
Sbjct: 111 DKDALIDLFGKVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180
RE+AGV IP +RIYGLG+GPKVEVLK +Q KPE QG+TLHFVEDRLATLKNVIKEPELD
Sbjct: 171 REIAGVIIPSERIYGLGSGPKVEVLKLIQDKPEHQGLTLHFVEDRLATLKNVIKEPELDK 230
Query: 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
WNLYLG+WGYNT+KER EAASIPRIQ+++LS FS KLK
Sbjct: 231 WNLYLGNWGYNTEKERAEAASIPRIQVIELSTFSNKLK 268
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454274|ref|XP_002275801.1| PREDICTED: uncharacterized protein LOC100260183 [Vitis vinifera] gi|297745313|emb|CBI40393.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 359 bits (922), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 185/218 (84%), Positives = 202/218 (92%)
Query: 1 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
M I+RPVVETGYENLLLVRLLLE+R+PSIRKSSV EGLT+EGILENWSK+KPVIME+W E
Sbjct: 51 MFIIRPVVETGYENLLLVRLLLEMRLPSIRKSSVVEGLTIEGILENWSKLKPVIMEEWDE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
R+ LVDLFGKVRDEWM+ DL TWI ANRFYPG+ DALKFASS++YIVTTKQ RFA+ALL
Sbjct: 111 KREPLVDLFGKVRDEWMEDDLATWIDANRFYPGVADALKFASSKVYIVTTKQGRFAEALL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180
RELAGVTIP +RIYGLGTGPKVEVLKQLQK+ E QG+TLHFVEDRLATLKNVIKEPELDG
Sbjct: 171 RELAGVTIPSERIYGLGTGPKVEVLKQLQKQSEHQGLTLHFVEDRLATLKNVIKEPELDG 230
Query: 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
WNLYLG WGYNTQKEREEAA I RIQLL+LSDFS+KLK
Sbjct: 231 WNLYLGKWGYNTQKEREEAAGISRIQLLELSDFSKKLK 268
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18406942|ref|NP_566060.1| uncharacterized protein [Arabidopsis thaliana] gi|30690184|ref|NP_850443.1| uncharacterized protein [Arabidopsis thaliana] gi|3702346|gb|AAC62903.1| expressed protein [Arabidopsis thaliana] gi|15292713|gb|AAK92725.1| unknown protein [Arabidopsis thaliana] gi|20197209|gb|AAM14973.1| expressed protein [Arabidopsis thaliana] gi|21280859|gb|AAM45106.1| unknown protein [Arabidopsis thaliana] gi|222423162|dbj|BAH19560.1| AT2G45990 [Arabidopsis thaliana] gi|330255533|gb|AEC10627.1| uncharacterized protein [Arabidopsis thaliana] gi|330255534|gb|AEC10628.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 178/218 (81%), Positives = 201/218 (92%)
Query: 1 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
MHI+RPVVETGYENLLLVRLLLE ++PSIRKSSV+EGLTV+GILE+W+K KPVIME W E
Sbjct: 51 MHIVRPVVETGYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
+RDALVDLFGKVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTKQ RFA+ALL
Sbjct: 111 DRDALVDLFGKVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180
RE+AGV IP +RIYGLG+GPKVEVLK LQ KPE QG+TLHFVEDRLATLKNVIKEPELD
Sbjct: 171 REIAGVIIPSERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDK 230
Query: 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
W+LYLG WGYNT+KER EAA IPRIQ+++LS FS KLK
Sbjct: 231 WSLYLGTWGYNTEKERAEAAGIPRIQVIELSTFSNKLK 268
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147782417|emb|CAN70694.1| hypothetical protein VITISV_002394 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 348 bits (893), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 184/225 (81%), Positives = 201/225 (89%), Gaps = 7/225 (3%)
Query: 1 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
M I+RPVVETGYENLLLVRLLLE+R+PSIRKSSV EGLT+EGILENWSK+KPVIME+W E
Sbjct: 51 MFIIRPVVETGYENLLLVRLLLEMRLPSIRKSSVVEGLTIEGILENWSKLKPVIMEEWDE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
R+ LVDLFGKVRDEWM+ DL TWI ANRFYPG+ DALKFASS++YIVTTKQ RFA+ALL
Sbjct: 111 KREPLVDLFGKVRDEWMEDDLATWIDANRFYPGVADALKFASSKVYIVTTKQGRFAEALL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTL-------HFVEDRLATLKNVI 173
RELAGVTIP +RIYGLGTGPKVEVLKQLQK+ E QG+TL FVEDRLATLKNVI
Sbjct: 171 RELAGVTIPSERIYGLGTGPKVEVLKQLQKQSEHQGLTLPLYPILSSFVEDRLATLKNVI 230
Query: 174 KEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
KEPELDGWNLYLG WGYNTQKEREEAA I RIQLL+LSDFS+KLK
Sbjct: 231 KEPELDGWNLYLGKWGYNTQKEREEAAGISRIQLLELSDFSKKLK 275
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 218 | ||||||
| TAIR|locus:2050730 | 268 | AT2G45990 "AT2G45990" [Arabido | 1.0 | 0.813 | 0.779 | 1.9e-90 |
| TAIR|locus:2050730 AT2G45990 "AT2G45990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
Identities = 170/218 (77%), Positives = 193/218 (88%)
Query: 1 MHILRPVVETGYENXXXXXXXXEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE 60
MHI+RPVVETGYEN E ++PSIRKSSV+EGLTV+GILE+W+K KPVIME W E
Sbjct: 51 MHIVRPVVETGYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDE 110
Query: 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALL 120
+RDALVDLFGKVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTKQ RFA+ALL
Sbjct: 111 DRDALVDLFGKVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALL 170
Query: 121 RELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180
RE+AGV IP +RIYGLG+GPKVEVLK LQ KPE QG+TLHFVEDRLATLKNVIKEPELD
Sbjct: 171 REIAGVIIPSERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDK 230
Query: 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218
W+LYLG WGYNT+KER EAA IPRIQ+++LS FS KLK
Sbjct: 231 WSLYLGTWGYNTEKERAEAAGIPRIQVIELSTFSNKLK 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 218 210 0.00080 112 3 11 22 0.39 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 593 (63 KB)
Total size of DFA: 174 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.39u 0.09s 17.48t Elapsed: 00:00:01
Total cpu time: 17.39u 0.09s 17.48t Elapsed: 00:00:01
Start: Sat May 11 11:01:48 2013 End: Sat May 11 11:01:49 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 218 | |||
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 0.004 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 36.7 bits (85), Expect = 0.004
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 88 NRFYPGIPDALKFASS---RIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPK 141
+R +PG+ + L S ++ IVT K R D LL+ L G+ D I G P
Sbjct: 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL-GLADYFDVIVGGDDVPP 143
|
Length = 220 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 218 | |||
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.95 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.94 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.94 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.93 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.93 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.93 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.92 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.92 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.91 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.91 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.9 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.89 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.88 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.86 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.86 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.85 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.84 | |
| PLN02940 | 382 | riboflavin kinase | 99.84 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.84 | |
| PLN02811 | 220 | hydrolase | 99.84 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.84 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.83 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.83 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.82 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.82 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.82 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.8 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.79 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.79 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.79 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.79 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.79 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.78 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.76 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.75 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.74 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.73 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.73 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.72 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.72 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.72 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.71 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.7 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.7 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.66 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.65 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.63 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.63 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.63 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.62 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.62 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.62 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.61 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.61 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.6 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.57 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.53 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.53 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.51 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.5 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.49 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.49 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.49 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.48 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.48 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.43 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.41 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.4 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.39 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.38 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.37 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.34 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.3 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.23 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.22 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.21 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.21 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.21 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.2 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.19 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.19 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.18 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.16 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.16 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.08 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.06 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.03 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 99.01 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.01 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 98.98 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.96 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.91 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.89 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 98.84 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.76 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.75 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 98.7 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 98.68 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.6 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 98.6 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.54 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.54 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.53 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 98.5 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.46 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.45 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 98.42 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.37 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.37 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.23 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.15 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.13 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.01 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 98.0 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.0 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.98 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.97 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.9 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 97.73 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.7 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.67 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.65 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 97.59 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 97.58 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 97.55 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.42 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.4 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.39 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 97.35 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.34 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 97.3 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.21 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.09 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.05 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.04 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.98 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 96.95 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 96.9 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 96.69 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 96.56 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 96.46 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.25 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.24 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.18 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 96.12 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.04 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 95.95 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 95.9 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 95.89 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 95.81 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.81 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 95.8 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 95.78 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.76 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.75 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 95.6 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 95.56 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 95.4 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 95.26 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 94.72 | |
| PLN02887 | 580 | hydrolase family protein | 94.44 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 94.33 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 94.14 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 93.61 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 93.55 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 93.53 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 93.51 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 93.47 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 93.36 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 93.32 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 93.31 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 93.22 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 92.81 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 92.36 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 92.21 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 92.16 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 91.76 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 91.15 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 90.79 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 90.58 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 90.49 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 90.26 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 90.22 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 90.06 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 89.79 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 89.67 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 88.12 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 87.54 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 87.47 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 87.2 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 87.12 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 87.09 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 86.21 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 85.85 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 82.86 | |
| KOG0323 | 635 | consensus TFIIF-interacting CTD phosphatases, incl | 81.72 |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=198.48 Aligned_cols=169 Identities=25% Similarity=0.325 Sum_probs=136.0
Q ss_pred hHHHHHhhhc--cHHHHHHhcCCC-HHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCCh
Q 027821 40 VEGILENWSK--IKPVIMEDWSEN-RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQS 113 (218)
Q Consensus 40 ~~~~~~~~~G--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~ 113 (218)
..+.+..++| ....+.+..+.. .+...+..+.++++|.+...+.. ...+|||+.++|. ++|++++|||||++
T Consensus 39 ~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~ 116 (220)
T COG0546 39 DEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGIVTNKPE 116 (220)
T ss_pred CHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEEEeCCcH
Confidence 4555678888 444444433321 12112456666666655442221 3689999999999 89999999999999
Q ss_pred HHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 114 RFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 114 ~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
..++.+|++ +|+.+||+.++|.+ .||+|+++..++.+.+.++++++|||||.+|+++| ++ ||+++|+|+||
T Consensus 117 ~~~~~~l~~-~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA-~~---Ag~~~v~v~~g 191 (220)
T COG0546 117 RELDILLKA-LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAA-KA---AGVPAVGVTWG 191 (220)
T ss_pred HHHHHHHHH-hCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHH-HH---cCCCEEEEECC
Confidence 999999999 99999999999954 67999999999999988877999999999999999 99 99999999999
Q ss_pred CCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 190 YNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 190 ~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|++.+.+....++ ++++++.||...+
T Consensus 192 ~~~~~~l~~~~~d--~vi~~~~el~~~l 217 (220)
T COG0546 192 YNSREELAQAGAD--VVIDSLAELLALL 217 (220)
T ss_pred CCCCcchhhcCCC--EEECCHHHHHHHH
Confidence 9877778777777 9999999998775
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=184.83 Aligned_cols=165 Identities=15% Similarity=0.079 Sum_probs=134.0
Q ss_pred ChHHHHHhhhc-cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChH
Q 027821 39 TVEGILENWSK-IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSR 114 (218)
Q Consensus 39 ~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~ 114 (218)
+.++ +....| ........+ .++..+.....|+..+.+.. .....+|||+.++|+ ++|++++|+||+.+.
T Consensus 38 ~~~~-~~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~ 110 (214)
T PRK13288 38 KRED-VLPFIGPSLHDTFSKI--DESKVEEMITTYREFNHEHH----DELVTEYETVYETLKTLKKQGYKLGIVTTKMRD 110 (214)
T ss_pred CHHH-HHHHhCcCHHHHHHhc--CHHHHHHHHHHHHHHHHHhh----hhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 3444 445556 322223322 34445566666777664433 455789999999999 789999999999999
Q ss_pred HHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCC
Q 027821 115 FADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 115 ~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
.+...|++ +|+..||+.|+|++ .||+|+++.+++.+.+.++.+++||||+.+|+++| ++ +|+++|+|.||+
T Consensus 111 ~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa-~~---aG~~~i~v~~g~ 185 (214)
T PRK13288 111 TVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAG-KN---AGTKTAGVAWTI 185 (214)
T ss_pred HHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHH-HH---CCCeEEEEcCCC
Confidence 99999999 99999999999986 57999999999999998899999999999999999 99 999999999999
Q ss_pred CCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 191 NTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 191 ~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+.+++.++.++ ++++++.|+...+
T Consensus 186 ~~~~~l~~~~~~--~~i~~~~~l~~~i 210 (214)
T PRK13288 186 KGREYLEQYKPD--FMLDKMSDLLAIV 210 (214)
T ss_pred CCHHHHhhcCcC--EEECCHHHHHHHH
Confidence 888877766555 9999999998764
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-25 Score=188.99 Aligned_cols=146 Identities=11% Similarity=0.016 Sum_probs=123.9
Q ss_pred CHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC-ceEEcC
Q 027821 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGL 136 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F-d~I~g~ 136 (218)
+.+.+.+....|+++|.+.. .....+|||+.++|+ ++|++++|+||+.++.++.+|++ +|+..+| |.|+|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~ 149 (253)
T TIGR01422 75 TEADIEAIYEAFEPLQLAKL----AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTT 149 (253)
T ss_pred CHHHHHHHHHHHHHHHHHHH----HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEcc
Confidence 34445566666776664433 456789999999999 78999999999999999999999 9999986 999888
Q ss_pred C----CCChHHHHHHHHhcCCCC-CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC-------------------
Q 027821 137 G----TGPKVEVLKQLQKKPELQ-GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT------------------- 192 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~-~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~------------------- 192 (218)
+ .||+|+++..++++.++. +.+|+|||||++|+++| ++ |||.+|+|.||+++
T Consensus 150 ~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA-~~---aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~ 225 (253)
T TIGR01422 150 DDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEG-RN---AGMWTVGLILSSNELGLSEEEYRALDPAELEAR 225 (253)
T ss_pred ccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHH-HH---CCCeEEEEecCCcccCCCHHHHHhCCHHHHHHH
Confidence 6 579999999999999874 88999999999999999 99 99999999999873
Q ss_pred ----HHHHHhccCCCCeEEcChhHHHhhc
Q 027821 193 ----QKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 193 ----~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+++..++|+ ++++++.|+...+
T Consensus 226 ~~~~~~~l~~~~~~--~v~~~~~el~~~~ 252 (253)
T TIGR01422 226 RAEATARLKAAGAH--YVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHhcCCC--EehhcHHHHHHhh
Confidence 3567767666 9999999998765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-25 Score=181.16 Aligned_cols=183 Identities=16% Similarity=0.146 Sum_probs=141.1
Q ss_pred HHHHHHHHHhhcCccccccccCCCCChHHHHHhhhc-cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCC
Q 027821 14 NLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSK-IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYP 92 (218)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 92 (218)
+....+++.++....-|. +.. ..+.+..+.| ....+.+.++.+....... ++..+ .. ....++||
T Consensus 13 ~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~-~~-----~~~~~~~~ 78 (205)
T TIGR01454 13 FAVMREAFAIAYREVVGD----GPA-PFEEYRRHLGRYFPDIMRIMGLPLEMEEPF---VRESY-RL-----AGEVEVFP 78 (205)
T ss_pred HHHHHHHHHHHHHHhcCC----CCC-CHHHHHHHhCccHHHHHHHcCCCHHHHHHH---HHHHH-Hh-----hcccccCC
Confidence 456667777666554331 123 3445667777 4444444555543211111 12222 11 34578999
Q ss_pred ChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCC
Q 027821 93 GIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDR 165 (218)
Q Consensus 93 Gv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs 165 (218)
|+.++|+ ++|++++|+||+....++..+++ +|+..+|+.+++++ .||+|+++..++++.++++.+|+||||+
T Consensus 79 g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~ 157 (205)
T TIGR01454 79 GVPELLAELRADGVGTAIATGKSGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDA 157 (205)
T ss_pred CHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCC
Confidence 9999999 78999999999999999999999 99999999999875 5799999999999999899999999999
Q ss_pred hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 166 LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 166 ~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+|+++| ++ +|+++|+|.||+++.+++....++ ++++++.++...+
T Consensus 158 ~~Di~aA-~~---~Gi~~i~~~~g~~~~~~l~~~~~~--~~~~~~~~l~~~~ 203 (205)
T TIGR01454 158 VTDLASA-RA---AGTATVAALWGEGDAGELLAARPD--FLLRKPQSLLALC 203 (205)
T ss_pred HHHHHHH-HH---cCCeEEEEEecCCChhhhhhcCCC--eeeCCHHHHHHHh
Confidence 9999999 99 999999999999999888777666 9999999998754
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-25 Score=181.49 Aligned_cols=145 Identities=16% Similarity=0.207 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-
Q 027821 62 RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG- 137 (218)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d- 137 (218)
.+...+..+.+.++|.+.. .....+|||+.++|+ ++|++++|+||+.+..++.++++ +|+..+|+.++|++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~ 136 (213)
T TIGR01449 62 AQRVAELRKLFDRHYEEVA----GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLEL-LGLAKYFSVLIGGDS 136 (213)
T ss_pred hHHHHHHHHHHHHHHHHhc----cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCcHhhCcEEEecCC
Confidence 3445566667777775443 455789999999999 78999999999999999999999 99999999999886
Q ss_pred ---CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 138 ---TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 138 ---~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
.||+|+++.+++++.++++.+|+|||||.+|+++| ++ +|+++|+|.||+++.+.+....++ ++++++.||.
T Consensus 137 ~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa-~~---aG~~~i~v~~g~~~~~~l~~~~a~--~~i~~~~~l~ 210 (213)
T TIGR01449 137 LAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAA-RA---AGCPSVLLTYGYRYGEAIDLLPPD--VLYDSLNELP 210 (213)
T ss_pred CCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHH-HH---CCCeEEEEccCCCCCcchhhcCCC--eEeCCHHHHH
Confidence 57999999999999999999999999999999999 99 999999999999877777666656 9999999998
Q ss_pred hhc
Q 027821 215 RKL 217 (218)
Q Consensus 215 ~~~ 217 (218)
.++
T Consensus 211 ~~~ 213 (213)
T TIGR01449 211 PLL 213 (213)
T ss_pred hhC
Confidence 764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=185.57 Aligned_cols=164 Identities=11% Similarity=0.003 Sum_probs=127.2
Q ss_pred ChHHHHHhhhc--cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCCh
Q 027821 39 TVEGILENWSK--IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQS 113 (218)
Q Consensus 39 ~~~~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~ 113 (218)
+.+.+.+.+.| ....+...+....+...+....++++|.+.. .....+|||+.++|+ ++|++++|+||+++
T Consensus 60 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~----~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~ 135 (248)
T PLN02770 60 TEEFFVENIAGKHNEDIALGLFPDDLERGLKFTDDKEALFRKLA----SEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPR 135 (248)
T ss_pred CHHHHHHHcCCCCHHHHHHHHcCcchhhHHHHHHHHHHHHHHHH----HhcCCcCccHHHHHHHHHHcCCeEEEEeCCCH
Confidence 34445566667 3333333322122222233445555554432 345789999999999 78999999999999
Q ss_pred HHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 114 RFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 114 ~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
..++..|++ +|+..||+.|++++ .||+|+++.+++++.++++.+|+||||+..|+++| ++ ||+++|+|.||
T Consensus 136 ~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA-~~---aGi~~i~v~~g 210 (248)
T PLN02770 136 ENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAG-VA---AGMPVVGLTTR 210 (248)
T ss_pred HHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHH-HH---CCCEEEEEeCC
Confidence 999999999 99999999998886 57999999999999998999999999999999999 99 99999999999
Q ss_pred CCCHHHHHhccCCCCeEEcChhHHH
Q 027821 190 YNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 190 ~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+ +.+.+..+.++ ++++++.|+.
T Consensus 211 ~-~~~~l~~~~a~--~vi~~~~e~~ 232 (248)
T PLN02770 211 N-PESLLMEAKPT--FLIKDYEDPK 232 (248)
T ss_pred C-CHHHHhhcCCC--EEeccchhhH
Confidence 6 55566655555 9999999843
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=182.36 Aligned_cols=166 Identities=14% Similarity=0.097 Sum_probs=132.3
Q ss_pred HHHHHhhhc-cHHHHHH-hcC-CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChH
Q 027821 41 EGILENWSK-IKPVIME-DWS-ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSR 114 (218)
Q Consensus 41 ~~~~~~~~G-~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~ 114 (218)
.+.++.+.| ....+.+ ..+ .+....++....+++.|.+.. .....+|||+.++|+ ++|++++|+||+...
T Consensus 48 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~ 123 (229)
T PRK13226 48 LAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEALI----GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEY 123 (229)
T ss_pred HHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhh----hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHH
Confidence 345566666 2233222 222 333444566677777775543 445789999999999 789999999999999
Q ss_pred HHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCC
Q 027821 115 FADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 115 ~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
.+..++++ +|+..+|+.+++++ .||+|+++.+++.+.++++.+|+||||+.+|+++| ++ +|+++|+|.||+
T Consensus 124 ~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA-~~---aG~~~i~v~~g~ 198 (229)
T PRK13226 124 LARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAA-RA---AGMPSVAALWGY 198 (229)
T ss_pred HHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHH-HH---CCCcEEEEeecC
Confidence 99999999 99999999998876 57999999999999999999999999999999999 99 999999999999
Q ss_pred CCH-HHHHhccCCCCeEEcChhHHHhhc
Q 027821 191 NTQ-KEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 191 ~~~-~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
... +.+....++ ++++++.||...|
T Consensus 199 ~~~~~~~~~~~~~--~~i~~~~el~~~~ 224 (229)
T PRK13226 199 RLHDDDPLAWQAD--VLVEQPQLLWNPA 224 (229)
T ss_pred CCCCcChhhcCCC--eeeCCHHHHHHHh
Confidence 743 345455555 9999999998754
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-24 Score=184.92 Aligned_cols=165 Identities=18% Similarity=0.198 Sum_probs=136.8
Q ss_pred HHHHHhhhc-cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHH
Q 027821 41 EGILENWSK-IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFA 116 (218)
Q Consensus 41 ~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~ 116 (218)
.+.+..+.| ....+.+.++.+.+..++..+.+++++.+. ....++|||+.++|+ ++|++++|+||+.+..+
T Consensus 98 ~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~ 172 (273)
T PRK13225 98 ERDYAQLRQWSSRTIVRRAGLSPWQQARLLQRVQRQLGDC-----LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNI 172 (273)
T ss_pred HHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHHHHhh-----cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 344566666 344444455665555566666777665332 455789999999999 78999999999999999
Q ss_pred HHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHH
Q 027821 117 DALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKE 195 (218)
Q Consensus 117 ~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~ 195 (218)
+.+|++ +|+..+|+.|++.+ ..+||+++..++.+.++++++|+||||+..|+++| ++ ||+.+|+|.||+.+.++
T Consensus 173 ~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA-~~---AG~~~I~v~~g~~~~~~ 247 (273)
T PRK13225 173 EAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAA-RQ---VGLIAVAVTWGFNDRQS 247 (273)
T ss_pred HHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHH-HH---CCCeEEEEecCCCCHHH
Confidence 999999 99999999998876 45889999999988888899999999999999999 99 99999999999999888
Q ss_pred HHhccCCCCeEEcChhHHHhhc
Q 027821 196 REEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 196 l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+....++ ++++++.||+.++
T Consensus 248 l~~~~ad--~~i~~~~eL~~~~ 267 (273)
T PRK13225 248 LVAACPD--WLLETPSDLLQAV 267 (273)
T ss_pred HHHCCCC--EEECCHHHHHHHH
Confidence 8777666 9999999998865
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=174.08 Aligned_cols=169 Identities=15% Similarity=0.113 Sum_probs=134.3
Q ss_pred ChHHHHHhhhc--cHHHHH---HhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcC
Q 027821 39 TVEGILENWSK--IKPVIM---EDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTT 110 (218)
Q Consensus 39 ~~~~~~~~~~G--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTn 110 (218)
+.++..+.+.| ....+. ...+.+.+..++..+.|.+.|.+... .....++||+.++|+ ++|++++|+||
T Consensus 35 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~G~~~~L~~L~~~g~~~~ivT~ 111 (220)
T TIGR03351 35 TPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAEAYD---DGPPVALPGAEEAFRSLRSSGIKVALTTG 111 (220)
T ss_pred CHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhc---ccCCccCCCHHHHHHHHHHCCCEEEEEeC
Confidence 45555554667 222222 22355545556666777777654320 124589999999999 78999999999
Q ss_pred CChHHHHHHHHHhcCCC--CCCceEEcCC----CCChHHHHHHHHhcCCCC-CCcEEEEcCChhhHHHhhccCccCCceE
Q 027821 111 KQSRFADALLRELAGVT--IPPDRIYGLG----TGPKVEVLKQLQKKPELQ-GMTLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 111 k~~~~~~~iL~~~~gl~--~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~-~~e~l~IGDs~~Di~aA~k~~~~AGv~~ 183 (218)
+.++.++.+|++ +|+. .+|+.++|++ .||+|+++..++.+.++. +.+|+||||+..|+++| ++ +||.+
T Consensus 112 ~~~~~~~~~l~~-~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa-~~---aG~~~ 186 (220)
T TIGR03351 112 FDRDTAERLLEK-LGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAG-IN---AGAGA 186 (220)
T ss_pred CchHHHHHHHHH-hhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHH-HH---CCCCe
Confidence 999999999999 9999 9999999886 479999999999999876 68999999999999999 99 99999
Q ss_pred -EEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 184 -YLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 184 -i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|+|.||+.+.+.+....++ ++++++.|+..-+
T Consensus 187 ~i~~~~g~~~~~~~~~~~~~--~~i~~~~~l~~~~ 219 (220)
T TIGR03351 187 VVGVLTGAHDAEELSRHPHT--HVLDSVADLPALL 219 (220)
T ss_pred EEEEecCCCcHHHHhhcCCc--eeecCHHHHHHhh
Confidence 9999999888888766555 9999999987643
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=180.42 Aligned_cols=145 Identities=11% Similarity=0.015 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC-ceEEcCC
Q 027821 62 RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGLG 137 (218)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F-d~I~g~d 137 (218)
.+...+..+.|+++|.+.. .....+|||+.++|+ ++|++++|+||+.+..+..+|++ +|+..+| |.|+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~ 152 (267)
T PRK13478 78 EADVDALYAAFEPLQIAKL----ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTD 152 (267)
T ss_pred HHHHHHHHHHHHHHHHHHH----hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCC
Confidence 3444556666766664433 456789999999999 78999999999999999999999 9998875 8898876
Q ss_pred ----CCChHHHHHHHHhcCCCC-CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC--------------------
Q 027821 138 ----TGPKVEVLKQLQKKPELQ-GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT-------------------- 192 (218)
Q Consensus 138 ----~kpkPe~l~~l~~~~~~~-~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~-------------------- 192 (218)
.||+|+++..++.+.++. +.+|+|||||.+|+++| ++ ||+++|+|.||++.
T Consensus 153 ~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA-~~---aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 228 (267)
T PRK13478 153 DVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEG-LN---AGMWTVGVILSGNELGLSEEEYQALSAAELAARR 228 (267)
T ss_pred cCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHH-HH---CCCEEEEEccCcccccCCHHHHHhcCHHHHHHHH
Confidence 579999999999999875 68999999999999999 99 99999999999873
Q ss_pred ---HHHHHhccCCCCeEEcChhHHHhhc
Q 027821 193 ---QKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 193 ---~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+.+..++++ ++++++.||...+
T Consensus 229 ~~~~~~l~~~~a~--~vi~~~~~l~~~l 254 (267)
T PRK13478 229 ERARARLRAAGAH--YVIDTIADLPAVI 254 (267)
T ss_pred HHHHHHHHHcCCC--eehhhHHHHHHHH
Confidence 3567677666 9999999998754
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-23 Score=178.68 Aligned_cols=166 Identities=13% Similarity=0.068 Sum_probs=130.5
Q ss_pred CChHHHHHhhhc--cHHHHHHhcC--CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcC
Q 027821 38 LTVEGILENWSK--IKPVIMEDWS--ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTT 110 (218)
Q Consensus 38 ~~~~~~~~~~~G--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTn 110 (218)
++.++.++.++| ....+...++ .+.+...++...+++.|.... .....+|||+.++|+ ++|++++|+||
T Consensus 58 ~~~~e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn 133 (260)
T PLN03243 58 PPPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKEDLYEYMQ----GGLYRLRPGSREFVQALKKHEIPIAVAST 133 (260)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH----ccCcccCCCHHHHHHHHHHCCCEEEEEeC
Confidence 345667777888 3333333332 233344455555555553222 234679999999999 78999999999
Q ss_pred CChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 111 KQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 111 k~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
+++..++.+|++ +|+..||+.|++++ .||+|+++..++.+.++++.+|+|||||..|+++| ++ |||++|+|
T Consensus 134 ~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA-~~---aG~~~i~v 208 (260)
T PLN03243 134 RPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAA-HD---GCMKCVAV 208 (260)
T ss_pred cCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHH-HH---cCCEEEEE
Confidence 999999999999 99999999999886 57999999999999999999999999999999999 99 99999999
Q ss_pred ecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 187 DWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 187 ~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
. |+.+...+. .++ ++++++.|+..|.
T Consensus 209 ~-g~~~~~~l~--~ad--~vi~~~~el~~~~ 234 (260)
T PLN03243 209 A-GKHPVYELS--AGD--LVVRRLDDLSVVD 234 (260)
T ss_pred e-cCCchhhhc--cCC--EEeCCHHHHHHHH
Confidence 5 777666543 334 9999999998764
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=176.00 Aligned_cols=146 Identities=19% Similarity=0.237 Sum_probs=125.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
.+++..++..+.|.+.|.+. .....+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.|+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~i~~~ 150 (272)
T PRK13223 77 VDDELAEQALALFMEAYADS-----HELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQ-MKIGRYFRWIIGG 150 (272)
T ss_pred CCHHHHHHHHHHHHHHHHhc-----CcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHH-cCcHhhCeEEEec
Confidence 44455566667777766432 234679999999999 78999999999999999999999 9999999999988
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ .||+|++++.++.+.++++.+|+||||+.+|+++| ++ +|+++++|.||+.+.+.+....++ ++++++.+
T Consensus 151 d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA-~~---aGi~~i~v~~G~~~~~~l~~~~~~--~vi~~l~e 224 (272)
T PRK13223 151 DTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAA-KA---AGVQCVALSYGYNHGRPIAEESPA--LVIDDLRA 224 (272)
T ss_pred CCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHH-HH---CCCeEEEEecCCCCchhhhhcCCC--EEECCHHH
Confidence 6 47999999999999999999999999999999999 99 999999999999888777666555 99999999
Q ss_pred HHhhc
Q 027821 213 FSRKL 217 (218)
Q Consensus 213 l~~~~ 217 (218)
|...+
T Consensus 225 l~~~~ 229 (272)
T PRK13223 225 LLPGC 229 (272)
T ss_pred HHHHH
Confidence 98653
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-22 Score=180.28 Aligned_cols=164 Identities=12% Similarity=0.039 Sum_probs=132.2
Q ss_pred CChHHHHHhhhc--cHHHHHHhc--CCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcC
Q 027821 38 LTVEGILENWSK--IKPVIMEDW--SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTT 110 (218)
Q Consensus 38 ~~~~~~~~~~~G--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTn 110 (218)
.+.++.+..+.| ....+.... ..++...+++.+.+++.|.+.. .....+|||+.++|+ ++|++++|+||
T Consensus 165 ~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~~~----~~~~~l~pGa~ElL~~Lk~~GiklaIaSn 240 (381)
T PLN02575 165 PPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQALQ----GGIYRLRTGSQEFVNVLMNYKIPMALVST 240 (381)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHh----ccCCCcCcCHHHHHHHHHHCCCeEEEEeC
Confidence 346666778888 333333332 2244555666777777775443 445689999999999 88999999999
Q ss_pred CChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 111 KQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 111 k~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
+++..++.+|++ +||..|||.|++++ .||+|+++..++.++++.+.+|+||||+..|++|| ++ |||++|+|
T Consensus 241 ~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAA-k~---AGm~~IgV 315 (381)
T PLN02575 241 RPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAA-HD---ARMKCVAV 315 (381)
T ss_pred CCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHH-HH---cCCEEEEE
Confidence 999999999999 99999999999986 47999999999999999999999999999999999 99 99999999
Q ss_pred ecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 187 DWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 187 ~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
.||+ ...++ ..++ ++++++.||..
T Consensus 316 ~~~~-~~~~l--~~Ad--~iI~s~~EL~~ 339 (381)
T PLN02575 316 ASKH-PIYEL--GAAD--LVVRRLDELSI 339 (381)
T ss_pred CCCC-ChhHh--cCCC--EEECCHHHHHH
Confidence 9875 33333 2345 99999999854
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-22 Score=165.16 Aligned_cols=147 Identities=20% Similarity=0.288 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
.+.+..++....+.++|.+.. .....++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.+++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~ 142 (226)
T PRK13222 68 PDEELLEKLRELFDRHYAENV----AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEA-LGIADYFSVVIGG 142 (226)
T ss_pred ccHHHHHHHHHHHHHHHHHhc----cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCccCccEEEcC
Confidence 445556666777777775443 445789999999999 78999999999999999999999 9999999999987
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ .||+|++++.++.+.+.++.+|+||||+.+|+++| ++ +|+++|+|.||+.+..++... .|+++++++.|
T Consensus 143 ~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a-~~---~g~~~i~v~~g~~~~~~~~~~--~~~~~i~~~~~ 216 (226)
T PRK13222 143 DSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAA-RA---AGCPSVGVTYGYNYGEPIALS--EPDVVIDHFAE 216 (226)
T ss_pred CCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHH-HH---CCCcEEEECcCCCCccchhhc--CCCEEECCHHH
Confidence 5 57999999999999999999999999999999999 99 999999999999876666544 45599999999
Q ss_pred HHhhc
Q 027821 213 FSRKL 217 (218)
Q Consensus 213 l~~~~ 217 (218)
|...+
T Consensus 217 l~~~l 221 (226)
T PRK13222 217 LLPLL 221 (226)
T ss_pred HHHHH
Confidence 98875
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=164.40 Aligned_cols=138 Identities=14% Similarity=0.136 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CC
Q 027821 67 DLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TG 139 (218)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~k 139 (218)
+..+++.+.+.+.. .....+|||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.+++++ .|
T Consensus 74 ~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~K 148 (222)
T PRK10826 74 EVVQRIIARVISLI----EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSK 148 (222)
T ss_pred HHHHHHHHHHHHHH----hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCC
Confidence 44445555553332 445789999999999 78999999999999999999999 99999999999886 57
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
|+|++++.++...++++++|+||||+.+|+++| ++ ||+++|+|.++....+.. ...++ +++.++.||..|
T Consensus 149 p~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA-~~---aG~~~i~v~~~~~~~~~~-~~~~~--~~~~~~~dl~~~ 218 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAA-KA---ARMRSIVVPAPEQQNDPR-WALAD--VKLESLTELTAA 218 (222)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHH-HH---cCCEEEEecCCccCchhh-hhhhh--eeccCHHHHhhh
Confidence 999999999999999999999999999999999 99 999999999887654432 22345 899999999876
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=157.65 Aligned_cols=119 Identities=18% Similarity=0.099 Sum_probs=102.4
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
.....+|||+.++|+ ++|++++|+||+....+...++. .|+. +|+.+++++ .||+|+++..++...++.+.
T Consensus 79 ~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~-~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~ 156 (218)
T PRK11587 79 TEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKA-AGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQ 156 (218)
T ss_pred hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHh-cCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcc
Confidence 445789999999999 78999999999999888889998 9984 678888765 57999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+|+|||||..|+++| ++ ||+++|+|.||.... .... |+++++++.||.
T Consensus 157 ~~l~igDs~~di~aA-~~---aG~~~i~v~~~~~~~---~~~~--~~~~~~~~~el~ 204 (218)
T PRK11587 157 ECVVVEDAPAGVLSG-LA---AGCHVIAVNAPADTP---RLDE--VDLVLHSLEQLT 204 (218)
T ss_pred cEEEEecchhhhHHH-HH---CCCEEEEECCCCchh---hhcc--CCEEecchhhee
Confidence 999999999999999 99 999999999986432 2233 449999999874
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-21 Score=160.01 Aligned_cols=123 Identities=21% Similarity=0.230 Sum_probs=106.9
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
....++||+.++|+ ++|++++|+||+....+...+++ +|+..|||.|++++ .||+|+++..++++.++++.+
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 169 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEE 169 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhh
Confidence 34689999999999 78999999999999999999999 99999999998875 579999999999999999999
Q ss_pred EEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
++|||||. +|+++| ++ +|+++|+|.+|.....+.. ....|+++++++.||+
T Consensus 170 ~~~igDs~~~di~~A-~~---aG~~~i~~~~~~~~~~~~~-~~~~~~~~i~~~~el~ 221 (221)
T TIGR02253 170 AVMVGDRLDKDIKGA-KN---LGMKTVWINQGKSSKMEDD-VYPYPDYEISSLRELL 221 (221)
T ss_pred EEEECCChHHHHHHH-HH---CCCEEEEECCCCCcccccc-cccCCCeeeCcHHhhC
Confidence 99999998 899999 99 9999999999986543322 1234559999999874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=156.88 Aligned_cols=165 Identities=11% Similarity=0.071 Sum_probs=121.2
Q ss_pred CChHHHHHhhhc-----cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHHhCCCcEEEEcCCC
Q 027821 38 LTVEGILENWSK-----IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQ 112 (218)
Q Consensus 38 ~~~~~~~~~~~G-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~~~g~~laIvTnk~ 112 (218)
++.++....+.| ....+...++.+.. .+++...|++.+.+.. .....++||+.++|+..+++++|+||++
T Consensus 37 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~gv~~~L~~L~~~~~ivTn~~ 111 (221)
T PRK10563 37 LSLEEVFKRFKGVKLYEIIDIISKEHGVTLA-KAELEPVYRAEVARLF----DSELEPIAGANALLESITVPMCVVSNGP 111 (221)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHHHH----HccCCcCCCHHHHHHHcCCCEEEEeCCc
Confidence 345566677766 22333344454321 1233344555443322 3457899999999996679999999999
Q ss_pred hHHHHHHHHHhcCCCCCCc-eEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 113 SRFADALLRELAGVTIPPD-RIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 113 ~~~~~~iL~~~~gl~~~Fd-~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+..++..|++ +|+..+|+ .|++++ .||+|+++..++.+.++++.+|+||||+..|+++| ++ ||+++|++.
T Consensus 112 ~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA-~~---aG~~~i~~~ 186 (221)
T PRK10563 112 VSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSG-IA---AGMEVFYFC 186 (221)
T ss_pred HHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHH-HH---CCCEEEEEC
Confidence 9999999999 99999996 676663 57999999999999999999999999999999999 99 999999997
Q ss_pred cCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 188 WGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 188 ~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
++.+... .. ..++ .+++++.||.+-
T Consensus 187 ~~~~~~~-~~-~~~~--~~~~~~~~l~~~ 211 (221)
T PRK10563 187 ADPHNKP-ID-HPLV--TTFTDLAQLPEL 211 (221)
T ss_pred CCCCCcc-hh-hhhh--HHHHHHHHHHHH
Confidence 6654432 21 2223 568888887753
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.8e-21 Score=158.66 Aligned_cols=124 Identities=16% Similarity=0.138 Sum_probs=105.6
Q ss_pred cccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCC-CC
Q 027821 85 IGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQ-GM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~-~~ 157 (218)
.....+|||+.++|+ ++|++++|+||+....++..|++ +|+..+||.|++++ .||+|+++..++.+.++. ++
T Consensus 91 ~~~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 169 (224)
T PRK09449 91 AEICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169 (224)
T ss_pred hhcCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence 334679999999999 77899999999999999999999 99999999998876 579999999999999864 47
Q ss_pred cEEEEcCCh-hhHHHhhccCccCCceEEEEecC-CCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 158 TLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWG-YNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 158 e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G-~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
+|+||||+. +|+++| ++ +|+++|++.++ ..+. ... .|+++++++.||...+|
T Consensus 170 ~~~~vgD~~~~Di~~A-~~---aG~~~i~~~~~~~~~~---~~~--~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 170 RVLMVGDNLHSDILGG-IN---AGIDTCWLNAHGREQP---EGI--APTYQVSSLSELEQLLC 223 (224)
T ss_pred cEEEEcCCcHHHHHHH-HH---CCCcEEEECCCCCCCC---CCC--CCeEEECCHHHHHHHHh
Confidence 899999998 699999 99 99999999854 3221 222 45599999999988765
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.7e-20 Score=166.72 Aligned_cols=135 Identities=12% Similarity=0.087 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHH-HhcCCCCCCceEEcCC----C
Q 027821 67 DLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLR-ELAGVTIPPDRIYGLG----T 138 (218)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~-~~~gl~~~Fd~I~g~d----~ 138 (218)
+..+.+++.+.+. .....++||+.++|+ ++|++++|+||+.+..++..|+ + +|+..+||.|++++ .
T Consensus 76 ~~~~~~~~~~~~~-----~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~-~gl~~~Fd~ii~~d~v~~~ 149 (382)
T PLN02940 76 EFNSEITPLLSEQ-----WCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCH-QGWKESFSVIVGGDEVEKG 149 (382)
T ss_pred HHHHHHHHHHHHH-----HccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc-cChHhhCCEEEehhhcCCC
Confidence 3444555555332 234679999999999 8999999999999999999987 7 89999999999886 5
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 139 GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 139 kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
||+|+++..+++..++++.+|+|||||..|+++| ++ ||+++|+|.||+.+.. ... .|+++++++.|+..
T Consensus 150 KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA-~~---aGi~~I~v~~g~~~~~--~~~--~ad~~i~sl~el~~ 218 (382)
T PLN02940 150 KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAG-KA---AGMEVIAVPSIPKQTH--LYS--SADEVINSLLDLQP 218 (382)
T ss_pred CCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHH-HH---cCCEEEEECCCCcchh--hcc--CccEEeCCHhHcCH
Confidence 7999999999999999999999999999999999 99 9999999999976543 223 34599999999753
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.7e-20 Score=170.10 Aligned_cols=120 Identities=17% Similarity=0.269 Sum_probs=106.3
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---CCChHHHHHHHHhcCCCCCCcEE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG---TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d---~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++|||+.++|+ ++|++++|+||+.++.++.+|++ +|+..||+.+++++ .+|||+++..++.+. ++.+|+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v 404 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNKY--DIKEAA 404 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHhc--CcceEE
Confidence 4689999999999 78999999999999999999999 99999999999886 359999998888775 467899
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||+.+|+++| ++ ||+.+|+|.||+...+++ .. |+++++++.|+..++
T Consensus 405 ~VGDs~~Di~aA-k~---AG~~~I~v~~~~~~~~~~--~~--~d~~i~~l~el~~~l 453 (459)
T PRK06698 405 VVGDRLSDINAA-KD---NGLIAIGCNFDFAQEDEL--AQ--ADIVIDDLLELKGIL 453 (459)
T ss_pred EEeCCHHHHHHH-HH---CCCeEEEEeCCCCccccc--CC--CCEEeCCHHHHHHHH
Confidence 999999999999 99 999999999998765543 23 459999999998765
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-20 Score=155.84 Aligned_cols=120 Identities=15% Similarity=0.130 Sum_probs=100.7
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHH-HHHHHhcCCCCCCceEEcCC------CCChHHHHHHHHhcCC--
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFAD-ALLRELAGVTIPPDRIYGLG------TGPKVEVLKQLQKKPE-- 153 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~-~iL~~~~gl~~~Fd~I~g~d------~kpkPe~l~~l~~~~~-- 153 (218)
....+|||+.++|+ ++|++++|+||+.+.... ..+++ .++..+|+.+++++ .||+|+++..++.+.+
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~-~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~ 153 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRH-GELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDG 153 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHccc-HHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCC
Confidence 34679999999999 889999999999886554 34555 68889999998776 4799999999988885
Q ss_pred -CCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 154 -LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 154 -~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+++.+|+||||+..|+++| ++ +|+++|+|.||+.+...+ .. |+++++++.|+.
T Consensus 154 ~~~~~~~v~IgDs~~di~aA-~~---aG~~~i~v~~~~~~~~~~--~~--~d~vi~~~~e~~ 207 (220)
T PLN02811 154 PVDPGKVLVFEDAPSGVEAA-KN---AGMSVVMVPDPRLDKSYC--KG--ADQVLSSLLDFK 207 (220)
T ss_pred CCCccceEEEeccHhhHHHH-HH---CCCeEEEEeCCCCcHhhh--hc--hhhHhcCHhhCC
Confidence 7899999999999999999 99 999999999998765433 23 449999998864
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.4e-21 Score=155.53 Aligned_cols=124 Identities=14% Similarity=0.032 Sum_probs=100.7
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChH--------HHHHHHHHhcCCCCCCceEE-cCC----CCChHHHHHHHHh
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSR--------FADALLRELAGVTIPPDRIY-GLG----TGPKVEVLKQLQK 150 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~--------~~~~iL~~~~gl~~~Fd~I~-g~d----~kpkPe~l~~l~~ 150 (218)
...+||||.++|+ ++|++++|+||++.. .+...+++ +|+..+|..+. +++ .||+|+++.++++
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence 4578999999999 789999999998752 23445777 88877654433 332 6899999999999
Q ss_pred cCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCH------HHHHhccCCCCeEEcChhHHHhhc
Q 027821 151 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ------KEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~------~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+++.++.+|+||||+..|+++| ++ +|+++|+|.||++.. +.+... .|+++++++.||..++
T Consensus 105 ~l~~~p~~~i~IGD~~~Di~aA-~~---aGi~~i~v~~g~~~~~~~~~~~~l~~~--~~~~~~~~~~el~~~l 171 (173)
T PRK06769 105 KHGLDLTQCAVIGDRWTDIVAA-AK---VNATTILVRTGAGYDALHTYRDKWAHI--EPNYIAENFEDAVNWI 171 (173)
T ss_pred HcCCCHHHeEEEcCCHHHHHHH-HH---CCCeEEEEecCCCchhhhhhhcccccC--CCcchhhCHHHHHHHH
Confidence 9998899999999999999999 99 999999999998663 223333 4559999999999875
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-20 Score=153.65 Aligned_cols=120 Identities=18% Similarity=0.275 Sum_probs=105.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcC-CCCCCc
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKP-ELQGMT 158 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~-~~~~~e 158 (218)
..+++||+.++|+ ++ ++++|+||+....++.+|++ +|+..+||.|++++ .||+|+++..++... ++++.+
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 4679999999999 55 99999999999999999999 99999999998875 579999999999988 889999
Q ss_pred EEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
|+||||+. +|+++| ++ +||++|+++||..+. ... ..|+++++++.||...
T Consensus 173 ~v~igD~~~~di~~A-~~---~G~~~i~~~~~~~~~--~~~--~~~~~~~~~~~el~~~ 223 (224)
T TIGR02254 173 VLMIGDSLTADIKGG-QN---AGLDTCWMNPDMHPN--PDD--IIPTYEIRSLEELYEI 223 (224)
T ss_pred eEEECCCcHHHHHHH-HH---CCCcEEEECCCCCCC--CCC--CCCceEECCHHHHHhh
Confidence 99999998 799999 99 999999999987653 122 3566999999999864
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-20 Score=150.22 Aligned_cols=119 Identities=24% Similarity=0.236 Sum_probs=98.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEEcC------------
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL------------ 136 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~g~------------ 136 (218)
...+|||+.++|+ ++|++++|+||++. .....++.+ +++. |+.++.+
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~~ 100 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFRQ 100 (176)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCcccccccC
Confidence 4678999999999 89999999999985 455677888 7877 7776431
Q ss_pred C---CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceE-EEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G---TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL-YLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d---~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~-i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ +||+|+++..++++.++++.+|+||||+.+|+++| ++ ||+++ ++|.||+...... .+. |+++++++.|
T Consensus 101 ~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA-~~---aG~~~~i~v~~g~~~~~~~-~~~--ad~~i~~~~e 173 (176)
T TIGR00213 101 VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAG-VA---AKVKTNVLVRTGKPITPEA-ENI--ADWVLNSLAD 173 (176)
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHH-HH---CCCcEEEEEecCCcccccc-ccc--CCEEeccHHH
Confidence 1 58999999999999999999999999999999999 99 99998 8999998653322 233 4599999999
Q ss_pred HHh
Q 027821 213 FSR 215 (218)
Q Consensus 213 l~~ 215 (218)
|.+
T Consensus 174 l~~ 176 (176)
T TIGR00213 174 LPQ 176 (176)
T ss_pred hhC
Confidence 864
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=148.75 Aligned_cols=158 Identities=14% Similarity=0.098 Sum_probs=113.7
Q ss_pred CCChHHHHHhhhc-cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH--hCCCcEEEEcCCCh
Q 027821 37 GLTVEGILENWSK-IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTTKQS 113 (218)
Q Consensus 37 ~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~--~~g~~laIvTnk~~ 113 (218)
|++.+++...+.+ ....+...++.+.+...+....|++. .+.....+|||+.++|+ +++++++++||++.
T Consensus 28 g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~ 100 (197)
T PHA02597 28 NIPTDHILKMIQDERFRDPGELFGCDQELAKKLIEKYNNS-------DFIRYLSAYDDALDVINKLKEDYDFVAVTALGD 100 (197)
T ss_pred CCCHHHHHHHHhHhhhcCHHHHhcccHHHHHHHhhhhhHH-------HHHHhccCCCCHHHHHHHHHhcCCEEEEeCCcc
Confidence 4555554433333 22223334444444444444444421 11345679999999999 44568899999887
Q ss_pred HHHHHHHHHhcCCCC----CCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC--CceEEEE
Q 027821 114 RFADALLRELAGVTI----PPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD--GWNLYLG 186 (218)
Q Consensus 114 ~~~~~iL~~~~gl~~----~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A--Gv~~i~V 186 (218)
......+++ +++.. +|+.+++++ .+|||+++..++.+.+ +.+++|||||..|+++| ++ | ||++|+|
T Consensus 101 ~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA-~~---a~~Gi~~i~~ 173 (197)
T PHA02597 101 SIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAA-HE---ALSQLPVIHM 173 (197)
T ss_pred chhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHH-HH---HHcCCcEEEe
Confidence 776667777 88865 567777765 6799999999999887 67899999999999999 99 9 9999999
Q ss_pred ecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 187 DWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 187 ~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+||+. ...+.|++.+++++|+.
T Consensus 174 ~~~~~------~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 174 LRGER------DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cchhh------ccccchhhhhccHHHHh
Confidence 99964 34556679999999986
|
2 hypothetical protein; Provisional |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=152.53 Aligned_cols=123 Identities=11% Similarity=0.048 Sum_probs=103.3
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
....+|||+.++|+ ++|++++|+||++++.++..+++ +|+..+|+.|++++ .||+|+++..++++.++++.+
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 44689999999999 78999999999999999999999 99999999998876 579999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCce-EEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWN-LYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~-~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
|+|||||..|+++| ++ +||+ +++|.++.+...+... ... ..++++.+++..
T Consensus 169 ~l~igDs~~di~aA-~~---aG~~~~~~v~~~~~~~~~~~~-~~~--~~~~~~~~~~~~ 220 (224)
T PRK14988 169 TLFIDDSEPILDAA-AQ---FGIRYCLGVTNPDSGIAEKQY-QRH--PSLNDYRRLIPS 220 (224)
T ss_pred EEEEcCCHHHHHHH-HH---cCCeEEEEEeCCCCCccchhc-cCC--CcHHHHHHHhhh
Confidence 99999999999999 99 9997 6889988765443221 122 336666666544
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=157.78 Aligned_cols=119 Identities=13% Similarity=0.159 Sum_probs=101.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC---CCCceEEcCC---CCChHHHHHHHHhcCCCCCCc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT---IPPDRIYGLG---TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~---~~Fd~I~g~d---~kpkPe~l~~l~~~~~~~~~e 158 (218)
.+++||+.++|+ ++|++++|+||+....+..++++ ++.. .+|+.+.+.+ .||+|+++..++...++++.+
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~-~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT-LLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 589999999999 78999999999999999999998 6433 3445553333 579999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
|+||||+.+|+++| ++ +|+++|+|.||+++.+++ .. ++++++++.|+..
T Consensus 222 ~l~IGDs~~Di~aA-~~---aG~~~i~v~~g~~~~~~l--~~--ad~vi~~~~~l~~ 270 (286)
T PLN02779 222 CVVVEDSVIGLQAA-KA---AGMRCIVTKSSYTADEDF--SG--ADAVFDCLGDVPL 270 (286)
T ss_pred EEEEeCCHHhHHHH-HH---cCCEEEEEccCCcccccc--CC--CcEEECChhhcch
Confidence 99999999999999 99 999999999999887665 23 4499999998864
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=142.03 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=87.2
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
....++||+ ++|+ +++++++|+||+.+..++..|++ +|+..|||.|+|++ .||+|+++..+..+++.++.+|
T Consensus 85 ~~~~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 162 (188)
T PRK10725 85 DSVEPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQC 162 (188)
T ss_pred ccCCCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHe
Confidence 345789974 7887 66699999999999999999999 99999999999886 5799999999999999889999
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+||||+.+|+++| ++ +|+++|+|.
T Consensus 163 l~igDs~~di~aA-~~---aG~~~i~~~ 186 (188)
T PRK10725 163 VVFEDADFGIQAA-RA---AGMDAVDVR 186 (188)
T ss_pred EEEeccHhhHHHH-HH---CCCEEEeec
Confidence 9999999999999 99 999999984
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.2e-19 Score=143.41 Aligned_cols=123 Identities=23% Similarity=0.208 Sum_probs=100.8
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEEcC-----C----CC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL-----G----TG 139 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~g~-----d----~k 139 (218)
...+|||+.++|+ ++|++++|+||++. +.+..++++ +|+ +|+.++.+ + .|
T Consensus 27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~K 103 (181)
T PRK08942 27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCRK 103 (181)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCCC
Confidence 4579999999999 78999999999973 455667888 887 47776532 1 57
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|+|+++..++...++++++|+||||+.+|+.+| ++ +|+.+|+|.||+.... +....+.++++++++.++.+++
T Consensus 104 P~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A-~~---aG~~~i~v~~g~~~~~-~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 104 PKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAA-AA---AGVTPVLVRTGKGVTT-LAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred CCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHH-HH---CCCeEEEEcCCCCchh-hhcccCCCceeecCHHHHHHHH
Confidence 999999999999998999999999999999999 99 9999999999986543 3333331259999999998875
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=140.99 Aligned_cols=118 Identities=17% Similarity=0.148 Sum_probs=97.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc
Q 027821 59 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG 135 (218)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g 135 (218)
+.+++.+......+.+.|.+... .....++||+.++|+ ++|++++|+||+ ..++.+|++ +|+..+|+.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~ 134 (185)
T TIGR02009 61 GLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVD 134 (185)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeee
Confidence 35555555555556555533210 134689999999999 789999999998 668999999 999999999988
Q ss_pred CC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 136 LG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 136 ~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
++ .||+|+++.+++++.+.++.+++||||+..|+++| ++ +|+++|+|
T Consensus 135 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA-~~---~G~~~i~v 185 (185)
T TIGR02009 135 ADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAA-RA---AGMFAVAV 185 (185)
T ss_pred hhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHH-HH---CCCeEeeC
Confidence 75 57999999999999998899999999999999999 99 99999986
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-18 Score=171.61 Aligned_cols=118 Identities=15% Similarity=0.163 Sum_probs=108.4
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC-CCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT-IPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~-~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
.+|||+.++|+ ++|++++|+||+.+..++..|++ +|+. .+||.|++++ .||+|+++..+++++++++.+|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v 239 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence 58999999999 88999999999999999999999 9996 7999999886 57999999999999999999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
||||+..|+++| ++ +||++|+|.||+ +.+++..++++ ++++++.|+.
T Consensus 240 ~IgDs~~Di~AA-~~---aGm~~I~v~~~~-~~~~L~~~~a~--~vi~~l~el~ 286 (1057)
T PLN02919 240 VIEDALAGVQAA-RA---AGMRCIAVTTTL-SEEILKDAGPS--LIRKDIGNIS 286 (1057)
T ss_pred EEcCCHHHHHHH-HH---cCCEEEEECCCC-CHHHHhhCCCC--EEECChHHCC
Confidence 999999999999 99 999999999997 56777777666 9999999874
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=140.42 Aligned_cols=118 Identities=16% Similarity=0.175 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
+++...+..+.+.++|.+.. .. .....++||+.++|+ ++|++++|+||+.. ....|++ +|+..+|+.+++++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~ 135 (185)
T TIGR01990 61 SEEEKEELAERKNDYYVELL-KE-LTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK-LGLIDYFDAIVDPA 135 (185)
T ss_pred CHHHHHHHHHHHHHHHHHHH-Hh-cCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh-cCcHhhCcEEEehh
Confidence 44445555555555554321 01 123579999999999 78999999999754 4678999 99999999998875
Q ss_pred ----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 138 ----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 138 ----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.||+|+++..++++.++++.+|+||||+.+|+++| ++ +||++|+|+
T Consensus 136 ~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA-~~---aG~~~i~v~ 185 (185)
T TIGR01990 136 EIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAI-KA---AGMFAVGVG 185 (185)
T ss_pred hcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHH-HH---cCCEEEecC
Confidence 57999999999999998999999999999999999 99 999999984
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-18 Score=146.54 Aligned_cols=121 Identities=12% Similarity=0.073 Sum_probs=99.3
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
....+|||+.++|+ +.+++++|+||++.+ +++ +|+..|||.|++++ .||+|+++..++.+.++++.+|
T Consensus 110 ~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 183 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PEL-FGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEI 183 (238)
T ss_pred hcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHH-CCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHE
Confidence 34689999999999 667999999998865 488 99999999998876 5799999999999999899999
Q ss_pred EEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 160 HFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 160 l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
+||||+ ..|+.+| ++ +|+++|+|..+.............|++.+.++.||..-
T Consensus 184 ~~VGD~~~~Di~~A-~~---aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~ 237 (238)
T PRK10748 184 LHVGDDLTTDVAGA-IR---CGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSL 237 (238)
T ss_pred EEEcCCcHHHHHHH-HH---CCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhh
Confidence 999999 5999999 99 99999999775433111111112466899999998764
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-18 Score=144.90 Aligned_cols=124 Identities=16% Similarity=0.172 Sum_probs=104.8
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
.....++||+.++|+ ++|++++++||+++..++.+|+. +|+.+||+.+++++ .||+|+++....+++++++.
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~ 160 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPE 160 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChH
Confidence 556789999999999 78899999999999999999999 99999999987765 68999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCC--HHHHHhccCCCCeEEcChhHHHh
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT--QKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~--~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
+|+.|+||.++++|| ++ |||.+|++.-+... ...+.....+ ....++.++..
T Consensus 161 ~CvviEDs~~Gi~Aa-~a---AGm~vv~v~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ 214 (221)
T COG0637 161 ECVVVEDSPAGIQAA-KA---AGMRVVGVPAGHDRPHLDPLDAHGAD--TVLLDLAELPA 214 (221)
T ss_pred HeEEEecchhHHHHH-HH---CCCEEEEecCCCCccccchhhhhhcc--hhhccHHHHHH
Confidence 999999999999999 99 99999999765442 2333333334 56666666654
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.1e-18 Score=138.04 Aligned_cols=97 Identities=18% Similarity=0.207 Sum_probs=90.6
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+ ++|++++|+||++...++..+++ +|+..+||.|++++ .||+|+++..++.+.++++.+|+
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 468999999999 67999999999999999999999 99999999999886 57999999999999999999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
||||+.+|+++| ++ +|+++|+|..+
T Consensus 170 ~vgD~~~Di~~A-~~---~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNPWDLGGA-KK---FGFKTAWVNRP 194 (198)
T ss_pred EEeCCHHHHHHH-HH---CCCcEEEecCC
Confidence 999999999999 99 99999999754
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-18 Score=139.80 Aligned_cols=107 Identities=16% Similarity=0.128 Sum_probs=91.4
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCC-ChHHHHHHHHHhcCCC---------CCCceEEcCC--CCCh--HHHHHH
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTK-QSRFADALLRELAGVT---------IPPDRIYGLG--TGPK--VEVLKQ 147 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk-~~~~~~~iL~~~~gl~---------~~Fd~I~g~d--~kpk--Pe~l~~ 147 (218)
.....+||||.++|+ ++|++++|+||+ ....++.+|+. +|+. .+|+.+++++ .++| |++++.
T Consensus 41 ~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~ 119 (174)
T TIGR01685 41 GTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQK 119 (174)
T ss_pred CCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHH
Confidence 445789999999999 899999999998 88999999999 9999 9999999886 2334 445666
Q ss_pred HHhcC--CCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHH
Q 027821 148 LQKKP--ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKER 196 (218)
Q Consensus 148 l~~~~--~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l 196 (218)
+.... ++++.+|+||||++.|+++| ++ +|+++++|.||+.-.+.+
T Consensus 120 ~~~~~~~gl~p~e~l~VgDs~~di~aA-~~---aGi~~i~v~~g~~~~~~~ 166 (174)
T TIGR01685 120 VNKVDPSVLKPAQILFFDDRTDNVREV-WG---YGVTSCYCPSGMDKGTFK 166 (174)
T ss_pred hhhcccCCCCHHHeEEEcChhHhHHHH-HH---hCCEEEEcCCCccHHHHH
Confidence 76665 57889999999999999999 99 999999999998655543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-17 Score=136.96 Aligned_cols=105 Identities=11% Similarity=0.145 Sum_probs=93.0
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
.++||+.++|+ ++|++++|+||++.......+.++.++..+||.|++++ .||+|++++.++++.++++.+|+|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 58999999999 78999999999998887777765248899999998875 689999999999999999999999
Q ss_pred EcCChhhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 162 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
|||+..|+++| ++ +|++++++.++..-.+.++
T Consensus 164 vgD~~~di~aA-~~---aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 164 FDDNADNIEAA-NA---LGITSILVTDKQTIPDYFA 195 (199)
T ss_pred eCCCHHHHHHH-HH---cCCEEEEecCCccHHHHHH
Confidence 99999999999 99 9999999988766665554
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.7e-18 Score=139.46 Aligned_cols=106 Identities=13% Similarity=0.088 Sum_probs=90.1
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHH--HHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRF--ADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~--~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
...+|||+.++|+ ++|++++|+||+.... ....+.+ .++..+||.|++++ .||+|+++..++.+.++++.
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4679999999999 7899999999987643 4444556 78999999998775 58999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
+|+||||+..|+++| ++ +||++|+|.++....+.|.
T Consensus 171 ~~l~i~D~~~di~aA-~~---aG~~~i~v~~~~~~~~~l~ 206 (211)
T TIGR02247 171 ECVFLDDLGSNLKPA-AA---LGITTIKVSDEEQAIHDLE 206 (211)
T ss_pred HeEEEcCCHHHHHHH-HH---cCCEEEEECCHHHHHHHHH
Confidence 999999999999999 99 9999999987655555444
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-17 Score=130.33 Aligned_cols=96 Identities=19% Similarity=0.249 Sum_probs=89.5
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
...+++||+.++|+ ++|++++|+||.+.+.++..+++ +|+..+|+.+++++ .||+|++++.++++.++++.+
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 34689999999999 69999999999999999999999 99999999998775 579999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
|+||||+..|+++| ++ +|+++|+|
T Consensus 153 ~~~vgD~~~d~~~A-~~---~G~~~i~v 176 (176)
T PF13419_consen 153 ILFVGDSPSDVEAA-KE---AGIKTIWV 176 (176)
T ss_dssp EEEEESSHHHHHHH-HH---TTSEEEEE
T ss_pred EEEEeCCHHHHHHH-HH---cCCeEEeC
Confidence 99999999999999 99 99999986
|
... |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.4e-17 Score=134.17 Aligned_cols=95 Identities=17% Similarity=0.173 Sum_probs=86.5
Q ss_pred cCCCCCChHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---C-----CChHHHHHHHHhcCCCCCCc
Q 027821 87 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG---T-----GPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 87 ~~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d---~-----kpkPe~l~~l~~~~~~~~~e 158 (218)
..+++||+.++|+....+++|+||+++..+...|++ +|+..+||.|++++ . ||+|++++.++++.++++.+
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 467999999999933368999999999999999999 99999999998875 2 89999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
|+||||+..|+++| ++ +|+++|+|
T Consensus 161 ~l~vgD~~~di~aA-~~---~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAA-KA---LGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHH-HH---cCCEEeeC
Confidence 99999999999999 99 99999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-17 Score=135.38 Aligned_cols=109 Identities=15% Similarity=0.238 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---
Q 027821 64 ALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--- 137 (218)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--- 137 (218)
.+.+..+.+.+++... ....+|||+.++|+ ++|++++|+||+... +...|++ +|+..+||.|++++
T Consensus 86 ~~~~~~~~~~~~~~~~------~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~ 157 (203)
T TIGR02252 86 SFEKIFEELYSYFATP------EPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVG 157 (203)
T ss_pred hHHHHHHHHHHHhcCC------CcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccC
Confidence 3444555555544221 23479999999999 689999999999875 5788999 99999999998875
Q ss_pred -CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEE
Q 027821 138 -TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 138 -~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i 184 (218)
.||+|+++..++.+.++++.+|+||||+. +|+++| ++ +|+++|
T Consensus 158 ~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A-~~---aG~~~i 202 (203)
T TIGR02252 158 AEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGA-RA---AGWRAL 202 (203)
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHH-HH---cCCeee
Confidence 57999999999999999999999999997 899999 99 999987
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.9e-17 Score=130.38 Aligned_cols=93 Identities=22% Similarity=0.251 Sum_probs=85.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
.+++||+.++|+ ++|++++|+||+.... ..++.+ +|+..+|+.|++++ .||+|+++..++++.++++.+|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 689999999999 7899999999999988 888888 99999999988764 57999999999999998999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEE
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
||||+..|+++| ++ +|+++|+|
T Consensus 162 ~vgD~~~di~aA-~~---~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAA-KA---AGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHH-HH---cCCEEEeC
Confidence 999999999999 99 99999975
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.8e-17 Score=132.55 Aligned_cols=101 Identities=20% Similarity=0.197 Sum_probs=87.7
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCC---------------hHHHHHHHHHhcCCCCCCceE-Ec----CC----
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRI-YG----LG---- 137 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~---------------~~~~~~iL~~~~gl~~~Fd~I-~g----~d---- 137 (218)
....++||||.++|+ ++|++++|+||++ ...+..+|++ +|+. |+.+ +| ++
T Consensus 25 ~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~ 101 (161)
T TIGR01261 25 LEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDC 101 (161)
T ss_pred HHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCC
Confidence 345689999999999 7899999999983 5678999999 9997 7654 55 33
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT 192 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~ 192 (218)
+||+|+++..+..++++++++++||||+..|+++| ++ +|+++++|.+|--.
T Consensus 102 ~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A-~~---aGi~~i~~~~~~~~ 152 (161)
T TIGR01261 102 RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLA-EN---LGIRGIQYDEEELN 152 (161)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHH-HH---CCCeEEEEChhhcC
Confidence 68999999999999988999999999999999999 99 99999999887543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.6e-17 Score=137.55 Aligned_cols=110 Identities=9% Similarity=-0.049 Sum_probs=90.1
Q ss_pred HHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCC----ChHHHHHHHHHhcCCCCCCceEEcCC--CCCh
Q 027821 71 KVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTK----QSRFADALLRELAGVTIPPDRIYGLG--TGPK 141 (218)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk----~~~~~~~iL~~~~gl~~~Fd~I~g~d--~kpk 141 (218)
.+++.|.+.. .....+++++.++|+ ++|++++||||+ .+..++.++++ +|+..+|+.|++++ .++|
T Consensus 100 ~~w~~~~~~~----~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~K 174 (237)
T TIGR01672 100 VFWEKVNNGW----DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQ 174 (237)
T ss_pred HHHHHHHHhc----ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCC
Confidence 3566664443 556788999999999 899999999998 77789999999 99999999999987 3356
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
|+... ++.++++ ++||||+.+|+.+| ++ ||+++|+|.||+++..
T Consensus 175 p~~~~-~l~~~~i----~i~vGDs~~DI~aA-k~---AGi~~I~V~~g~~s~~ 218 (237)
T TIGR01672 175 YTKTQ-WIQDKNI----RIHYGDSDNDITAA-KE---AGARGIRILRASNSTY 218 (237)
T ss_pred CCHHH-HHHhCCC----eEEEeCCHHHHHHH-HH---CCCCEEEEEecCCCCC
Confidence 66553 4445553 58999999999999 99 9999999999998764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-16 Score=133.17 Aligned_cols=117 Identities=14% Similarity=0.136 Sum_probs=96.7
Q ss_pred HHHHHH-HHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhc---CCCCCCceEEcCC-
Q 027821 66 VDLFGK-VRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELA---GVTIPPDRIYGLG- 137 (218)
Q Consensus 66 ~~~~~~-~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~---gl~~~Fd~I~g~d- 137 (218)
.++... |++.|.+ . .....+|||+.++|+ ++|++++|+||++....+.++++ . ++..+|+.++...
T Consensus 76 k~lqg~iw~~~Y~~-~----~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~ 149 (220)
T TIGR01691 76 KTLQGLIWRQGYES-G----ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTV 149 (220)
T ss_pred HHHHHHHHHHHHhc-C----CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCc
Confidence 444444 6666633 3 455689999999999 88999999999999998888888 6 5667777665432
Q ss_pred -CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC
Q 027821 138 -TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT 192 (218)
Q Consensus 138 -~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~ 192 (218)
.||+|+++.+++++.++++.+|+||||+..|+++| ++ |||++++|.++.+.
T Consensus 150 g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA-~~---AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 150 GLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAA-RK---AGLHTGQLVRPGND 201 (220)
T ss_pred ccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHH-HH---cCCEEEEEECCCCC
Confidence 68999999999999999999999999999999999 99 99999999887533
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.2e-16 Score=124.93 Aligned_cols=97 Identities=24% Similarity=0.213 Sum_probs=81.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCC--CceEEc-CC----CCChH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIP--PDRIYG-LG----TGPKV 142 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~--Fd~I~g-~d----~kpkP 142 (218)
.++|||+.++|+ ++|++++|+||+++ ..+..+|++ +|+... |..+.+ ++ .||+|
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCCH
Confidence 478999999999 89999999999984 567888999 998732 221211 22 58999
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 143 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 143 e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
++++.++.+.++++.+|+||||+..|+++| ++ +||++|++.-|
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A-~~---~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAA-RN---AGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHH-HH---CCCCEEEecCC
Confidence 999999999999999999999999999999 99 99999998654
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.7e-16 Score=126.51 Aligned_cols=85 Identities=16% Similarity=0.115 Sum_probs=77.7
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---CCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG---TGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d---~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
.+.+++.++|+ ++|++++|+||+++..++.+|++ +|+..+|+.+++++ .||+|+++..+++..++++.+|+||
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence 45666799999 78999999999999999999999 99999999998876 4799999999999998889999999
Q ss_pred cCChhhHHHhhcc
Q 027821 163 EDRLATLKNVIKE 175 (218)
Q Consensus 163 GDs~~Di~aA~k~ 175 (218)
||+.+|+++| ++
T Consensus 185 GD~~~Di~aA-~~ 196 (197)
T TIGR01548 185 GDTVDDIITG-RK 196 (197)
T ss_pred eCCHHHHHHH-Hh
Confidence 9999999999 76
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.6e-16 Score=124.59 Aligned_cols=100 Identities=19% Similarity=0.243 Sum_probs=87.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCC-hHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQ-SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~-~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+|||+.++|+ ++|++++|+||++ ...+..++++ +|+..++ ...||+|+++..++++.++++.+++|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 479999999999 7899999999999 6778888888 8876432 2368999999999999998899999999
Q ss_pred CCh-hhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 164 DRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 164 Ds~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
|+. .|+++| ++ +|+++|+|.||+++.+.+.
T Consensus 116 Ds~~~Di~aA-~~---aGi~~i~v~~g~~~~~~~~ 146 (170)
T TIGR01668 116 DRLFTDVMGG-NR---NGSYTILVEPLVHPDQWFI 146 (170)
T ss_pred CcchHHHHHH-HH---cCCeEEEEccCcCCccccc
Confidence 998 699999 99 9999999999998876543
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.2e-15 Score=128.51 Aligned_cols=108 Identities=12% Similarity=0.008 Sum_probs=86.1
Q ss_pred HHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCC----ChHHHHHHHHHhcCC--CCCCceEEcCCC--C
Q 027821 71 KVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTK----QSRFADALLRELAGV--TIPPDRIYGLGT--G 139 (218)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk----~~~~~~~iL~~~~gl--~~~Fd~I~g~d~--k 139 (218)
.|++.|.+.. .....|+||+.++|+ ++|+++++|||+ ....++.++++ +|+ .++|+.+++.+. |
T Consensus 100 ~fw~~y~~~~----~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K 174 (237)
T PRK11009 100 KFWEKMNNGW----DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQ 174 (237)
T ss_pred HHHHHHHhcc----cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCC
Confidence 4566664443 556889999999999 899999999995 46688888998 999 899999998873 4
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
+++. . .+.++++ ++||||+.+|+.+| ++ ||+++|+|.||+++.-
T Consensus 175 ~~K~--~-~l~~~~i----~I~IGDs~~Di~aA-~~---AGi~~I~v~~G~~~~~ 218 (237)
T PRK11009 175 YTKT--Q-WLKKKNI----RIFYGDSDNDITAA-RE---AGARGIRILRAANSTY 218 (237)
T ss_pred CCHH--H-HHHhcCC----eEEEcCCHHHHHHH-HH---cCCcEEEEecCCCCCC
Confidence 4433 2 2234442 58999999999999 99 9999999999998653
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.6e-15 Score=122.38 Aligned_cols=120 Identities=23% Similarity=0.355 Sum_probs=94.2
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC--CCCce---------EEcCC-------CCChHHHHH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT--IPPDR---------IYGLG-------TGPKVEVLK 146 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~--~~Fd~---------I~g~d-------~kpkPe~l~ 146 (218)
.+++||+.++|+ ++|++++|+||+.+..++.++++ +|+. .+|+. +.|.+ .++||++++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 468999999999 88999999999999999999999 9997 35642 22221 247999999
Q ss_pred HHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 147 QLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
++....+ ..+++||||+.+|+.+| ++ +|+.++.+ ||.....+.....++ ++++++.||..++
T Consensus 162 ~~~~~~~--~~~~i~iGDs~~Di~aa-~~---~~~~~~~~-~~~~~~~~~~~~~~~--~~i~~~~el~~~~ 223 (224)
T PLN02954 162 HIKKKHG--YKTMVMIGDGATDLEAR-KP---GGADLFIG-YGGVQVREAVAAKAD--WFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHcC--CCceEEEeCCHHHHHhh-hc---CCCCEEEe-cCCCccCHHHHhcCC--EEECCHHHHHHhh
Confidence 8888765 35789999999999999 98 88877654 564433333344555 9999999998765
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-15 Score=117.18 Aligned_cols=95 Identities=28% Similarity=0.324 Sum_probs=82.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCC--------hHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcC-CCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQ--------SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKP-ELQ 155 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~--------~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~-~~~ 155 (218)
..+|||+.++|+ ++|++++|+||+. .+.+...+++ +|+..++..+.+...||+|+++..++.+. +++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVLYACPHCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCChHHHHHHHHHcCCCC
Confidence 578999999999 8999999999999 8889999999 99974333322312689999999999999 589
Q ss_pred CCcEEEEcC-ChhhHHHhhccCccCCceEEEEe
Q 027821 156 GMTLHFVED-RLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 156 ~~e~l~IGD-s~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+.+++|||| +..|+.+| ++ +|+++|+|.
T Consensus 103 ~~~~v~IGD~~~~Di~~A-~~---~Gi~~i~~~ 131 (132)
T TIGR01662 103 PEESVYVGDQDLTDLQAA-KR---AGLAFILVA 131 (132)
T ss_pred hhheEEEcCCCcccHHHH-HH---CCCeEEEee
Confidence 999999999 79999999 99 999999884
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.2e-15 Score=124.70 Aligned_cols=123 Identities=20% Similarity=0.182 Sum_probs=104.1
Q ss_pred cCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 87 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 87 ~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..+++|++.++|+ ...++++|+||.........|++ +||.++||.|+.++ .||.|++++.+++..++++++|+
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 3679999999999 33388999999999999999999 99999999998876 57999999999999999999999
Q ss_pred EEcCChhhH-HHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDRLATL-KNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs~~Di-~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||+..+. .+| ++ +||++|.+..+.... ......|++.+.++.++...+
T Consensus 176 ~VgD~~~~di~gA-~~---~G~~~vwi~~~~~~~---~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 176 FVGDSLENDILGA-RA---LGMKTVWINRGGKPL---PDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred EECCChhhhhHHH-Hh---cCcEEEEECCCCCCC---CCCccCCceEEcCHHHHHHHH
Confidence 999998777 999 99 999999887665433 112235669999999998765
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.6e-16 Score=133.85 Aligned_cols=98 Identities=16% Similarity=0.077 Sum_probs=88.0
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC-CCceEEcCC-----------CCChHHHHHHHHhcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLG-----------TGPKVEVLKQLQKKP 152 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~-~Fd~I~g~d-----------~kpkPe~l~~l~~~~ 152 (218)
..++||+.++|+ ++|++++|+||++....+.++++ +|+.. +|+.++|.+ .||+|+++..++.+.
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 468999999999 88999999999999999999999 99996 999998865 368899998888776
Q ss_pred CC-CCCcEEEEcCChhhHHHhhccCccCCceEEEEecCC
Q 027821 153 EL-QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 153 ~~-~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
.. .+.+|+||||+.+|+++| ++ +||++|+|.||-
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a-~~---~Gi~~i~v~~g~ 299 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMW-RR---IGLECWQVAPGD 299 (300)
T ss_pred hccCceEEEEEcCcHHHHHHH-HH---hCCeEEEecCCC
Confidence 55 458899999999999999 99 999999999983
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.4e-16 Score=138.55 Aligned_cols=119 Identities=15% Similarity=0.131 Sum_probs=96.6
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHH-HHHHHHhcCCCCCCceEEc---CC----CCChHHHHHHHHhcCCCCCC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFA-DALLRELAGVTIPPDRIYG---LG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~-~~iL~~~~gl~~~Fd~I~g---~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
..|+|+.++|+ ++|. ++|+||++.... ...+.. .|+..+|+.+.+ .+ .||+|+++..++...+.+++
T Consensus 143 ~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~ 220 (279)
T TIGR01452 143 FSYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPA 220 (279)
T ss_pred CCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChh
Confidence 35899999999 4676 899999997543 223445 677778877643 33 47999999999999988999
Q ss_pred cEEEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhc------cCCCCeEEcChhHH
Q 027821 158 TLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA------ASIPRIQLLQLSDF 213 (218)
Q Consensus 158 e~l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a------~~~p~~~~~~~~~l 213 (218)
+++||||+ .+||++| ++ +|+++|+|.||+++.++++.+ ...|+++++++.||
T Consensus 221 ~~lmIGD~~~tDI~~A-~~---aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 221 RTLMVGDRLETDILFG-HR---CGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hEEEECCChHHHHHHH-HH---cCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999999 4999999 99 999999999999999888643 24577999999875
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.1e-16 Score=136.22 Aligned_cols=123 Identities=10% Similarity=0.009 Sum_probs=103.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-------CCChHHHHHHHHhcCCCCCCcE
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-------TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-------~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
.|+++.++++ +.+.+++|+||+++......+.. +|+..+|+.+.+.. .||+|+++..++.+.+.++.++
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 199 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEA 199 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhE
Confidence 4778888888 67889999999999888888888 89999999876542 4799999999999988899999
Q ss_pred EEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+||||+. +|+.+| ++ +|+++++|.||.....+.+.....|+++++++.|+..++
T Consensus 200 ~~vGD~~~~Di~~a-~~---~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 200 VMIGDDCRDDVGGA-QD---CGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred EEECCCcHHHHHHH-HH---cCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 9999996 999999 99 999999999997655544333445669999999998764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=114.40 Aligned_cols=88 Identities=23% Similarity=0.295 Sum_probs=80.3
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG---TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d---~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
.....+||+.++|+ ++|++++|+||+.+..+...+++ + +..+|+.|++++ .||+|+++.+++.+.++++ +|
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~ 137 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EV 137 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CE
Confidence 34567899999999 78999999999999999999999 7 999999998876 5799999999999999888 99
Q ss_pred EEEcCChhhHHHhhccCccCC
Q 027821 160 HFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AG 180 (218)
+||||+..|+++| ++ +|
T Consensus 138 l~iGDs~~Di~aa-~~---aG 154 (154)
T TIGR01549 138 LHVGDNLNDIEGA-RN---AG 154 (154)
T ss_pred EEEeCCHHHHHHH-HH---cc
Confidence 9999999999999 88 76
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.6e-15 Score=119.20 Aligned_cols=88 Identities=24% Similarity=0.311 Sum_probs=75.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChH------------HHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHh
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSR------------FADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQK 150 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~------------~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~ 150 (218)
+|||+.++|+ ++|++++|+||++.. .++.+|++ +|+.. +.+++++ +||+|++++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHHH
Confidence 7999999999 899999999999873 57889999 99953 4454443 5799999999999
Q ss_pred cCC--CCCCcEEEEcCCh--------hhHHHhhccCccCCceEE
Q 027821 151 KPE--LQGMTLHFVEDRL--------ATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 151 ~~~--~~~~e~l~IGDs~--------~Di~aA~k~~~~AGv~~i 184 (218)
+.+ +++.+++||||+. .|+++| ++ +|++++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA-~~---aGi~~~ 159 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFA-KN---LGLEFK 159 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHH-HH---CCCCcC
Confidence 887 7889999999996 699999 99 999886
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.53 E-value=1e-14 Score=117.41 Aligned_cols=83 Identities=18% Similarity=0.196 Sum_probs=76.6
Q ss_pred cCCCCCChHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 87 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 87 ~~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
...++||+.++|+ +++|+||++...++..+++ +|+..+||.|++++ .||+|+++..++.+.++++.+|+||
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 3569999999996 5999999999999999999 99999999998886 5799999999999999999999999
Q ss_pred cCChhhHHHhhcc
Q 027821 163 EDRLATLKNVIKE 175 (218)
Q Consensus 163 GDs~~Di~aA~k~ 175 (218)
||+..|+.+| ++
T Consensus 163 gD~~~Di~~A-~~ 174 (175)
T TIGR01493 163 AAHQWDLIGA-RK 174 (175)
T ss_pred ecChhhHHHH-hc
Confidence 9999999999 75
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.2e-14 Score=124.81 Aligned_cols=98 Identities=15% Similarity=0.188 Sum_probs=84.1
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCC---------------ChHHHHHHHHHhcCCCCCCceE-EcC----C----
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTK---------------QSRFADALLRELAGVTIPPDRI-YGL----G---- 137 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk---------------~~~~~~~iL~~~~gl~~~Fd~I-~g~----d---- 137 (218)
.....+|||+.++|+ ++|++++|+||+ ....+..+++. +|+. |+.+ ++. +
T Consensus 26 ~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~~ 102 (354)
T PRK05446 26 LDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCSC 102 (354)
T ss_pred cccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCCC
Confidence 556789999999999 789999999996 35678888999 9984 7665 442 2
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
+||+|+++..+..+.++++.+++||||+.+|+++| ++ +||++|+|+-.
T Consensus 103 rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aA-k~---aGi~~I~v~~~ 150 (354)
T PRK05446 103 RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLA-EN---MGIKGIRYARE 150 (354)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHH-HH---CCCeEEEEECC
Confidence 68999999998888888899999999999999999 99 99999999443
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.7e-14 Score=100.64 Aligned_cols=72 Identities=19% Similarity=0.188 Sum_probs=66.4
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 213 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l 213 (218)
+||+|.++..++..+++++.+++||||+ ..||++| ++ +|+.+|+|.+|..+.+.+......|+++++++.|+
T Consensus 3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a-~~---~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAA-KA---AGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHH-HH---TTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHH-HH---cCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 5899999999999999899999999999 9999999 99 99999999999999888876667788999999885
|
... |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-13 Score=115.09 Aligned_cols=118 Identities=16% Similarity=0.154 Sum_probs=92.4
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceE------------EcCC--CCChHHHHHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRI------------YGLG--TGPKVEVLKQLQ 149 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I------------~g~d--~kpkPe~l~~l~ 149 (218)
..+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+.. .+.. .+|||++++.++
T Consensus 83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 161 (219)
T TIGR00338 83 NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILL 161 (219)
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHH
Confidence 3579999999999 78999999999999999999999 9999888532 1111 347999999999
Q ss_pred hcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc--ChhHHHhhc
Q 027821 150 KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKL 217 (218)
Q Consensus 150 ~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~--~~~~l~~~~ 217 (218)
.+.++++.+|+||||+.+|+.+| ++ +|+.+ + |+ ..+.+.. .++ +++. ++.++...|
T Consensus 162 ~~~~~~~~~~i~iGDs~~Di~aa-~~---ag~~i-~--~~--~~~~~~~-~a~--~~i~~~~~~~~~~~~ 219 (219)
T TIGR00338 162 RKEGISPENTVAVGDGANDLSMI-KA---AGLGI-A--FN--AKPKLQQ-KAD--ICINKKDLTDILPLL 219 (219)
T ss_pred HHcCCCHHHEEEEECCHHHHHHH-Hh---CCCeE-E--eC--CCHHHHH-hch--hccCCCCHHHHHhhC
Confidence 99988899999999999999999 99 99974 2 33 2233433 335 7766 567776543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.8e-14 Score=113.20 Aligned_cols=91 Identities=13% Similarity=-0.029 Sum_probs=78.0
Q ss_pred cCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCC-CCceEEcCC--CCChHHHHHHHHhcCCCCCCcEEE
Q 027821 87 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLG--TGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 87 ~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~-~Fd~I~g~d--~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
...++||+.++|+ +++++++|+||+.++.++.+|++ +|+.. +|+.|++++ ...||. +.+.+...+.++.+|+|
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEE
Confidence 3578999999999 77899999999999999999999 99965 569998886 335565 76666777778999999
Q ss_pred EcCChhhHHHhhccCccCCceE
Q 027821 162 VEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~ 183 (218)
|||++.|+++| ++ +|+.+
T Consensus 121 i~Ds~~~~~aa-~~---ngI~i 138 (148)
T smart00577 121 IDDSPDSWPFH-PE---NLIPI 138 (148)
T ss_pred EECCHHHhhcC-cc---CEEEe
Confidence 99999999999 98 88765
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.5e-14 Score=110.14 Aligned_cols=83 Identities=20% Similarity=0.110 Sum_probs=77.5
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCC-ChHHHHHHHHHhcC-------CCCCCceEEcCCCCChHHHHHHHHhcCC--CC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTK-QSRFADALLRELAG-------VTIPPDRIYGLGTGPKVEVLKQLQKKPE--LQ 155 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk-~~~~~~~iL~~~~g-------l~~~Fd~I~g~d~kpkPe~l~~l~~~~~--~~ 155 (218)
++|||+.++|+ ++|++++|+||+ ..+.+..++++ ++ +.++|+.+++++.+|||+++..++.+.+ ++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 48999999999 789999999999 88999999999 89 8999999999877899999999999999 99
Q ss_pred CCcEEEEcCChhhHHHh
Q 027821 156 GMTLHFVEDRLATLKNV 172 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA 172 (218)
+.+|+||||+..|+++.
T Consensus 108 p~~~l~igDs~~n~~~~ 124 (128)
T TIGR01681 108 PKSILFVDDRPDNNEEV 124 (128)
T ss_pred cceEEEECCCHhHHHHH
Confidence 99999999999999877
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-14 Score=127.21 Aligned_cols=112 Identities=18% Similarity=0.154 Sum_probs=93.2
Q ss_pred CCcEEEEcCCChHH-HHHHHHHhcCCCCCCceEEcCC-------CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHh
Q 027821 102 SSRIYIVTTKQSRF-ADALLRELAGVTIPPDRIYGLG-------TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNV 172 (218)
Q Consensus 102 g~~laIvTnk~~~~-~~~iL~~~~gl~~~Fd~I~g~d-------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA 172 (218)
+--++|+||++... ....+.. .|+..+|+.+.+.+ .||+|+++..++...++++.+++||||+. +||++|
T Consensus 186 ~g~~~i~tn~d~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A 264 (311)
T PLN02645 186 PGCLFIATNRDAVTHLTDAQEW-AGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG 264 (311)
T ss_pred CCCEEEEeCCCCCCCCCCCCCc-cchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH
Confidence 34699999999754 3455566 78888999886653 27999999999998888999999999997 999999
Q ss_pred hccCccCCceEEEEecCCCCHHHHHhc--cCCCCeEEcChhHHHhhcC
Q 027821 173 IKEPELDGWNLYLGDWGYNTQKEREEA--ASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 173 ~k~~~~AGv~~i~V~~G~~~~~~l~~a--~~~p~~~~~~~~~l~~~~~ 218 (218)
++ +|+++|+|.||+++.+++... ...|+++++++.+|..+++
T Consensus 265 -~~---aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 265 -QN---GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred -HH---cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 99 999999999999998887552 2456799999999988753
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-13 Score=113.87 Aligned_cols=115 Identities=14% Similarity=0.097 Sum_probs=83.1
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEE---------cCC-CC--ChHHHHHHHHh
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY---------GLG-TG--PKVEVLKQLQK 150 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~---------g~d-~k--pkPe~l~~l~~ 150 (218)
....+|||+.++|+ ++ ++++|+||+....++.++++ +|+..+|+..+ +.+ .+ +|+..+..+..
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 34678999999999 55 99999999999999999999 99998886532 222 12 23334444443
Q ss_pred cCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCe-EEcChhHHHhhc
Q 027821 151 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRI-QLLQLSDFSRKL 217 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~-~~~~~~~l~~~~ 217 (218)
...+|+||||+.+|+.+| ++ +|+. |.|+.. .. .....++ + +++++.||...+
T Consensus 143 ----~~~~~v~iGDs~~D~~~~-~a---a~~~---v~~~~~-~~-~~~~~~~--~~~~~~~~el~~~l 195 (205)
T PRK13582 143 ----LGYRVIAAGDSYNDTTML-GE---ADAG---ILFRPP-AN-VIAEFPQ--FPAVHTYDELLAAI 195 (205)
T ss_pred ----hCCeEEEEeCCHHHHHHH-Hh---CCCC---EEECCC-HH-HHHhCCc--ccccCCHHHHHHHH
Confidence 345789999999999999 99 8873 445542 22 3333333 5 899999998765
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.4e-13 Score=113.18 Aligned_cols=122 Identities=12% Similarity=0.074 Sum_probs=100.1
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcC-CCCCCceEEcC-C-----CCChHHHHHHHHhcCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAG-VTIPPDRIYGL-G-----TGPKVEVLKQLQKKPEL 154 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~g-l~~~Fd~I~g~-d-----~kpkPe~l~~l~~~~~~ 154 (218)
.....++||+.++++ ..|++++++||+.+...+.-+++ ++ +...|+.++.. + .||+|+++..+...++.
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~ 166 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGV 166 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCC
Confidence 456789999999999 89999999999999999999988 76 77778776543 2 46999999888888887
Q ss_pred CC-CcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 155 QG-MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 155 ~~-~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
.+ +.|++++|++.+++|| ++ |||++|+|.. .....+....++ +++++++++..
T Consensus 167 ~~~~k~lVfeds~~Gv~aa-~a---agm~vi~v~~--~~~~~~~~~~~~--~~~~~~~~~~~ 220 (222)
T KOG2914|consen 167 PPPSKCLVFEDSPVGVQAA-KA---AGMQVVGVAT--PDLSNLFSAGAT--LILESLEDFKP 220 (222)
T ss_pred CCccceEEECCCHHHHHHH-Hh---cCCeEEEecC--CCcchhhhhccc--eecccccccCc
Confidence 77 9999999999999999 99 9999999976 222333344445 88988887654
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.4e-13 Score=99.80 Aligned_cols=95 Identities=23% Similarity=0.209 Sum_probs=85.5
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----C----------------CChHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----T----------------GPKVE 143 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~----------------kpkPe 143 (218)
...++||+.++|+ ++|++++|+||+.+..++..++. +|+..+|+.+++.+ . +|+++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 3589999999999 78999999999999999999999 99999999888765 2 78899
Q ss_pred HHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 144 VLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
.+..+....+....++++|||+.+|+++| ++ +|+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~-~~---~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMA-KA---AGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHH-HH---cCCceeeC
Confidence 99888888877778999999999999999 98 89998875
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-12 Score=109.78 Aligned_cols=120 Identities=15% Similarity=0.107 Sum_probs=84.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC--CC--ceEEcCC----CCChHHHH----------
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI--PP--DRIYGLG----TGPKVEVL---------- 145 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~--~F--d~I~g~d----~kpkPe~l---------- 145 (218)
...++||+.++|+ ++|++++|+||+....++.+|++ + +.. .+ +..++.+ .+|+|+..
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 4679999999999 89999999999999999999999 7 643 22 2233333 34555431
Q ss_pred HHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 146 KQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
..++...+.++.+|+||||+.+|+.+| ++ ||+.++ . + ...........|.+.+++..|+...|
T Consensus 150 ~~~l~~~~~~~~~~i~iGDs~~Di~aa-~~---Ag~~~a--~-~--~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 150 PSLIRKLSDTNDFHIVIGDSITDLEAA-KQ---ADKVFA--R-D--FLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred HHHHHHhccCCCCEEEEeCCHHHHHHH-HH---CCccee--H-H--HHHHHHHHcCCCccccCCHHHHHHHH
Confidence 234444444667889999999999999 99 999333 1 2 11111112445668899999997765
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.3e-12 Score=108.83 Aligned_cols=72 Identities=13% Similarity=0.173 Sum_probs=63.7
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 213 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l 213 (218)
.||+|++++.+++..++++.+++||||+. +|+.+| ++ +|+++++|.||+...+++......|+++++++.|+
T Consensus 177 gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a-~~---~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 177 GKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAG-ID---AGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred CCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHH-HH---cCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 36888999999999988999999999996 899999 99 99999999999998888766555677999999875
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-12 Score=104.67 Aligned_cols=100 Identities=10% Similarity=0.040 Sum_probs=82.6
Q ss_pred HHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhc
Q 027821 95 PDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k 174 (218)
.+.|+++|++++|+||++...+..++++ +|+..+|+. .+|||+++.+++.+.++++.+|+||||+.+|+.++ +
T Consensus 37 i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~-~ 109 (154)
T TIGR01670 37 IRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVM-E 109 (154)
T ss_pred HHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH-H
Confidence 4444488999999999999999999999 999988763 37999999999999988899999999999999999 9
Q ss_pred cCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 175 EPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 175 ~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
+ +|+. +++.++. +.+.. .++ +++.++.
T Consensus 110 ~---ag~~-~~v~~~~---~~~~~-~a~--~i~~~~~ 136 (154)
T TIGR01670 110 K---VGLS-VAVADAH---PLLIP-RAD--YVTRIAG 136 (154)
T ss_pred H---CCCe-EecCCcC---HHHHH-hCC--EEecCCC
Confidence 9 9996 7776664 23332 334 8887764
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-12 Score=107.17 Aligned_cols=97 Identities=12% Similarity=0.031 Sum_probs=80.7
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--C------------CChHHHHHHH
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--T------------GPKVEVLKQL 148 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--~------------kpkPe~l~~l 148 (218)
...+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.++..+ . .+|++.+.++
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 34579999999999 78999999999999999999999 99998887654332 1 1344678888
Q ss_pred HhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 149 QKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.++.++++.+++||||+.+|+.+| ++ ||+.++...
T Consensus 156 ~~~~~~~~~~~i~iGDs~~D~~~a-~~---ag~~~a~~~ 190 (201)
T TIGR01491 156 KRELNPSLTETVAVGDSKNDLPMF-EV---ADISISLGD 190 (201)
T ss_pred HHHhCCCHHHEEEEcCCHhHHHHH-Hh---cCCeEEECC
Confidence 888887888999999999999999 99 999776543
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.5e-12 Score=104.61 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=83.3
Q ss_pred HHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCc
Q 027821 98 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 177 (218)
Q Consensus 98 L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~ 177 (218)
|+++|++++|+||++...+..++++ +|+..+|+ | .++||+.+.+++++.++++.+++||||+.+|+.+| ++
T Consensus 60 L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g--~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a-~~-- 130 (183)
T PRK09484 60 LLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---G--QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVM-EK-- 130 (183)
T ss_pred HHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---C--CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH-HH--
Confidence 3488999999999999999999999 99988876 2 34789999999999999999999999999999999 99
Q ss_pred cCCceEEEEecCCCCHHHHHhccCCCCeEEc------ChhHHHhh
Q 027821 178 LDGWNLYLGDWGYNTQKEREEAASIPRIQLL------QLSDFSRK 216 (218)
Q Consensus 178 ~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~------~~~~l~~~ 216 (218)
+|+.+ +|. +..++....++ +++. .+.|+.+.
T Consensus 131 -aG~~~-~v~----~~~~~~~~~a~--~v~~~~~g~g~~~el~~~ 167 (183)
T PRK09484 131 -VGLSV-AVA----DAHPLLLPRAD--YVTRIAGGRGAVREVCDL 167 (183)
T ss_pred -CCCeE-ecC----ChhHHHHHhCC--EEecCCCCCCHHHHHHHH
Confidence 99984 453 33344444555 8886 56776543
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.34 E-value=2e-12 Score=105.09 Aligned_cols=96 Identities=20% Similarity=0.231 Sum_probs=79.2
Q ss_pred HHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 96 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 96 e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
..|+++|++++|+||++...++..+++ +|+..+|+.+ ||||++++.+++..++++.+++||||+.+|+.++ +.
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~-~~ 116 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMM-KR 116 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHH-HH
Confidence 444489999999999999999999999 9999888854 7999999999999998899999999999999999 99
Q ss_pred CccCCceEEEEecCCCCHHHHHhccCCCCeEEc
Q 027821 176 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLL 208 (218)
Q Consensus 176 ~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~ 208 (218)
+|+.++-. +..+.++.+ ++ ++..
T Consensus 117 ---ag~~~am~----nA~~~lk~~-A~--~I~~ 139 (169)
T TIGR02726 117 ---VGLAVAVG----DAVADVKEA-AA--YVTT 139 (169)
T ss_pred ---CCCeEECc----CchHHHHHh-CC--EEcC
Confidence 99766533 223455443 34 6654
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.8e-12 Score=100.43 Aligned_cols=88 Identities=15% Similarity=0.157 Sum_probs=75.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC------------------------CCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG------------------------TGP 140 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d------------------------~kp 140 (218)
.+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.|+|++ ..+
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 579999999999 78999999999999999999999 99999999999742 126
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceE
Q 027821 141 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 141 kPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~ 183 (218)
|+++++++.... +.+++||||+.+|+.+| ++ |++-+
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa-~~---~d~~~ 185 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPA-KL---SDVVF 185 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhchH-hc---CCccc
Confidence 889998887763 45679999999999999 88 76543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.7e-11 Score=112.95 Aligned_cols=85 Identities=25% Similarity=0.373 Sum_probs=75.0
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCCh------------HHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHh
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQS------------RFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQK 150 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~------------~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~ 150 (218)
+||||.++|+ +.|++++|+||+.. ..+..+|++ +|+. |+.++|.+ +||+|+++..++.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 6999999999 89999999999988 568899999 9985 89888765 6899999998888
Q ss_pred cCC----CCCCcEEEEcCChhhHHHhhccCccCCc
Q 027821 151 KPE----LQGMTLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 151 ~~~----~~~~e~l~IGDs~~Di~aA~k~~~~AGv 181 (218)
+++ ++..+++||||+..|+++| ++ +|-
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g-~~---ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANG-KA---AGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHH-Hh---cCC
Confidence 773 6788999999999999998 87 664
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.4e-11 Score=96.03 Aligned_cols=118 Identities=23% Similarity=0.231 Sum_probs=91.6
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEE-cC--------CCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIY-GL--------GTG 139 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~-g~--------d~k 139 (218)
...+.||+.++|. +.|++++||||++. +.....|+. .|. -||.|+ |. ++|
T Consensus 29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRK 105 (181)
T COG0241 29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRK 105 (181)
T ss_pred HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccC
Confidence 3568999999999 89999999999654 446667777 676 477775 32 179
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
|+|.++..+++++.++..+.+||||+..|+++| .+ +|++.+.+..|......-. ...+ ++++++.++.
T Consensus 106 P~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a-~n---~gi~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~ 173 (181)
T COG0241 106 PKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAA-EN---AGIKGVLVLTGIGVTTDGA-GRAK--WVFDSLAEFA 173 (181)
T ss_pred CChHHHHHHHHHhCCCccceEEecCcHHHHHHH-HH---CCCCceEEEcCcccccccc-cccc--cccccHHHHH
Confidence 999999999999999999999999999999999 99 9999888877654432211 1223 6677777765
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.2e-11 Score=105.49 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=86.5
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc-------eEE-----cC--CCCChHHHHHHH
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPD-------RIY-----GL--GTGPKVEVLKQL 148 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd-------~I~-----g~--d~kpkPe~l~~l 148 (218)
...+++||+.++|+ +.|++++|+|+....+++.++++ +|+...+. ..+ |. +.++||+.++++
T Consensus 178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l 256 (322)
T PRK11133 178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL 256 (322)
T ss_pred HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence 44679999999999 89999999999999999999999 99975442 111 11 156999999999
Q ss_pred HhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc
Q 027821 149 QKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL 208 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~ 208 (218)
.++.++++.+|++|||+.+|+.++ ++ ||+.++ | ... +.+++ .++ +.++
T Consensus 257 a~~lgi~~~qtIaVGDg~NDl~m~-~~---AGlgiA---~-nAk-p~Vk~-~Ad--~~i~ 304 (322)
T PRK11133 257 AQEYEIPLAQTVAIGDGANDLPMI-KA---AGLGIA---Y-HAK-PKVNE-QAQ--VTIR 304 (322)
T ss_pred HHHcCCChhhEEEEECCHHHHHHH-HH---CCCeEE---e-CCC-HHHHh-hCC--EEec
Confidence 999999999999999999999999 99 998544 4 233 34433 345 5555
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=4e-11 Score=102.98 Aligned_cols=73 Identities=15% Similarity=0.121 Sum_probs=66.0
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
.||+|+++..++...+.++.+|+||||+. +|+.+| ++ +|+++++|.||..+.++++.....|+++++++.||.
T Consensus 173 gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A-~~---~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 173 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAG-FQ---AGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHH-HH---cCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 57999999999998888999999999996 899999 99 999999999999999888765566779999999983
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.8e-11 Score=113.21 Aligned_cols=110 Identities=19% Similarity=0.227 Sum_probs=88.4
Q ss_pred CCCCCChHHHHH---hCC-CcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g-~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..++||+.++|+ ++| ++++|+||+++..++.++++ +|++.+|..+ ...+|++.++++.... .+++|||
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~---~p~~K~~~v~~l~~~~----~~v~~vG 454 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAEL---LPEDKLAIVKELQEEG----GVVAMVG 454 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccC---CHHHHHHHHHHHHHcC----CEEEEEE
Confidence 689999999999 789 99999999999999999999 9998888754 2246788888887643 3779999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc--ChhHHHhh
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRK 216 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~--~~~~l~~~ 216 (218)
|+.+|+.++ ++ || ++|.||.++. .....+| +++. ++..+...
T Consensus 455 Dg~nD~~al-~~---A~---vgia~g~~~~--~~~~~Ad--~vi~~~~~~~l~~~ 498 (556)
T TIGR01525 455 DGINDAPAL-AA---AD---VGIAMGAGSD--VAIEAAD--IVLLNDDLSSLPTA 498 (556)
T ss_pred CChhHHHHH-hh---CC---EeEEeCCCCH--HHHHhCC--EEEeCCCHHHHHHH
Confidence 999999999 99 98 7899995443 3334456 7777 67766554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.8e-12 Score=107.76 Aligned_cols=93 Identities=11% Similarity=0.006 Sum_probs=79.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceE--EcCC----CCChHHHHHHHHhcCCCC-CCcE
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRI--YGLG----TGPKVEVLKQLQKKPELQ-GMTL 159 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I--~g~d----~kpkPe~l~~l~~~~~~~-~~e~ 159 (218)
-|+|+.++|+ ++|+++ |+||++.......+.+ +|...+|..+ +|.+ .||+|++++.++.+.+.. ..++
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 216 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRM 216 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3789999998 679997 9999999988888888 9998888866 5654 579999999999888643 5689
Q ss_pred EEEcCC-hhhHHHhhccCccCCceEEEEec
Q 027821 160 HFVEDR-LATLKNVIKEPELDGWNLYLGDW 188 (218)
Q Consensus 160 l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~ 188 (218)
+||||+ .+|+.+| ++ +|+++++|.+
T Consensus 217 ~~vGD~~~~Di~~a-~~---~G~~~i~v~t 242 (242)
T TIGR01459 217 LMVGDSFYTDILGA-NR---LGIDTALVLT 242 (242)
T ss_pred EEECCCcHHHHHHH-HH---CCCeEEEEeC
Confidence 999999 6999999 99 9999999963
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-10 Score=97.34 Aligned_cols=121 Identities=13% Similarity=0.122 Sum_probs=80.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC---ceEEcCC----CCChHHHH----------HH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP---DRIYGLG----TGPKVEVL----------KQ 147 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F---d~I~g~d----~kpkPe~l----------~~ 147 (218)
..++||+.++|+ ++|++++|+|++....++.++++ ++...+| +.+++.+ .+|+|+.. ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 579999999999 78999999999999999999999 7654444 2344333 34544332 12
Q ss_pred HHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 148 LQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
+..+....+.+++||||+.+|+.+| ++ ||+ +.+ -++ .....+. ...|..-+++..|+..+|+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a-~~---Ad~--~~a-r~~-l~~~~~~-~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAA-KQ---SDL--CFA-RDY-LLNECEE-LGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHH-Hh---CCe--eEe-hHH-HHHHHHH-cCCCccCcCCHHHHHHHHH
Confidence 2222222456789999999999999 99 887 222 221 1111222 2235566899999887763
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.7e-11 Score=111.04 Aligned_cols=113 Identities=16% Similarity=0.212 Sum_probs=90.7
Q ss_pred cCCCCCChHHHHH---hCCC-cEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 87 ANRFYPGIPDALK---FASS-RIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~-~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
...++||+.++|+ ++|+ +++|+||+++..++.++++ +|++.+|..+. ..+|++.++++..+. .+++||
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l~~~~----~~v~~v 431 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKELREKY----GPVAMV 431 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHHHhcC----CEEEEE
Confidence 4679999999999 8999 9999999999999999999 99998876432 336778888887654 467999
Q ss_pred cCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHhhc
Q 027821 163 EDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 217 (218)
Q Consensus 163 GDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~~~ 217 (218)
||+.+|+.++ ++ || +++.||+...+. ....+| +++ +++.++.+.+
T Consensus 432 GDg~nD~~al-~~---A~---vgia~g~~~~~~-~~~~ad--~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 432 GDGINDAPAL-AA---AD---VGIAMGASGSDV-AIETAD--VVLLNDDLSRLPQAI 478 (536)
T ss_pred eCCHHHHHHH-Hh---CC---EEEEeCCCccHH-HHHhCC--EEEECCCHHHHHHHH
Confidence 9999999999 99 98 489999643233 333556 777 8999887643
|
. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.5e-11 Score=102.35 Aligned_cols=98 Identities=16% Similarity=0.229 Sum_probs=86.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
.....+|+.++|+ ++|..++|+||-+.+ .+.++.. +|+..|||.|+.+. .||+|.+++.+++..++++++|
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 3467889999999 889999999999876 5588888 99999999987664 6899999999999999999999
Q ss_pred EEEcCChh-hHHHhhccCccCCceEEEEecCC
Q 027821 160 HFVEDRLA-TLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 160 l~IGDs~~-Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
++|||+.. |+++| ++ +||.++.|.-.-
T Consensus 189 vhIgD~l~nD~~gA-~~---~G~~ailv~~~~ 216 (237)
T KOG3085|consen 189 VHIGDLLENDYEGA-RN---LGWHAILVDNSI 216 (237)
T ss_pred EEecCccccccHhH-HH---cCCEEEEEcccc
Confidence 99999875 59999 99 999999997443
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.8e-11 Score=105.33 Aligned_cols=85 Identities=20% Similarity=0.178 Sum_probs=76.6
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHH---hcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRE---LAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~---~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
.+|||+.++|+ ++|++++||||++++.+..+|++ .+++.++|+.+.++ .+|||+.+..++++.++.+.+++||
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-~~pk~~~i~~~~~~l~i~~~~~vfi 109 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-WGPKSESLRKIAKKLNLGTDSFLFI 109 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-cCchHHHHHHHHHHhCCCcCcEEEE
Confidence 57999999999 89999999999999999999985 13677889988666 4799999999999999999999999
Q ss_pred cCChhhHHHhhcc
Q 027821 163 EDRLATLKNVIKE 175 (218)
Q Consensus 163 GDs~~Di~aA~k~ 175 (218)
||++.|+.++ ++
T Consensus 110 dD~~~d~~~~-~~ 121 (320)
T TIGR01686 110 DDNPAERANV-KI 121 (320)
T ss_pred CCCHHHHHHH-HH
Confidence 9999999999 87
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.3e-10 Score=94.04 Aligned_cols=112 Identities=13% Similarity=0.148 Sum_probs=87.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce-EE
Q 027821 59 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR-IY 134 (218)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~-I~ 134 (218)
|.+.+++....+++.+.+. ...++||+.++|+ ++|++++|+|++....++.++++ +|++.+|.. +.
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~ 135 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLE 135 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceE
Confidence 6777776655555443321 2368999999999 78999999999999999999999 999988755 22
Q ss_pred c-CC-------------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 135 G-LG-------------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 135 g-~d-------------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
. .+ .++|++.++.+..+.+++..++++||||.+|+.++ +. +|..++
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~-~~---a~~~~~ 195 (202)
T TIGR01490 136 ESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLL-SL---VGHPYV 195 (202)
T ss_pred EcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHH-Hh---CCCcEE
Confidence 1 11 13567778888887777778899999999999999 99 997664
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.2e-10 Score=93.97 Aligned_cols=85 Identities=21% Similarity=0.322 Sum_probs=74.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCC--CChHHHHHHHHhcCCCCCCcEEEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--GPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~--kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
..++||+.++|+ ++|++++|+|+.+...+..+.+. +|| ++.++.++. ||.|+++.++.+.++.++.+++||
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi---~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGI---FDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTS---CSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccc-ccc---ccccccccccccccchhHHHHHHHHhcCCCEEEEE
Confidence 578999999999 88999999999999999999999 999 454444444 899998888888887777899999
Q ss_pred cCChhhHHHhhccCccCC
Q 027821 163 EDRLATLKNVIKEPELDG 180 (218)
Q Consensus 163 GDs~~Di~aA~k~~~~AG 180 (218)
||+.+|+.|+ ++ ||
T Consensus 202 GDg~nD~~al-~~---Ag 215 (215)
T PF00702_consen 202 GDGVNDAPAL-KA---AG 215 (215)
T ss_dssp ESSGGHHHHH-HH---SS
T ss_pred ccCHHHHHHH-Hh---Cc
Confidence 9999999999 88 76
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.4e-08 Score=88.43 Aligned_cols=85 Identities=14% Similarity=0.141 Sum_probs=68.1
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc------CC----CCChH---------HH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG------LG----TGPKV---------EV 144 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g------~d----~kpkP---------e~ 144 (218)
...+.||+.++|+ ++|++++|+|+.....++.+|++ +|+...+..|++ .+ .+|.| .+
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 4679999999999 89999999999999999999999 999878888843 32 22334 33
Q ss_pred HHHHHhcCC--CCCCcEEEEcCChhhHHHh
Q 027821 145 LKQLQKKPE--LQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 145 l~~l~~~~~--~~~~e~l~IGDs~~Di~aA 172 (218)
++......+ .++.+|++|||+.+|+.||
T Consensus 198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma 227 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMA 227 (277)
T ss_pred HHHHHHHhCccCCcceEEEECcChhhhhHh
Confidence 444444444 4678899999999999999
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.3e-09 Score=89.50 Aligned_cols=114 Identities=12% Similarity=0.122 Sum_probs=80.5
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc--eEE-------cCC--CC-ChHHHHHHHHhcCC
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIY-------GLG--TG-PKVEVLKQLQKKPE 153 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd--~I~-------g~d--~k-pkPe~l~~l~~~~~ 153 (218)
.+++||+.++|+ +++.+++||||+....++.++++ +|++.+|. ..+ |.. .+ +|...++.+. +.+
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~-~~~ 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK-SLY 144 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHH-hhC
Confidence 578999999999 44469999999999999999999 99998886 222 211 23 3444555553 333
Q ss_pred CCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 154 LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
.++++|||+.+|+.++ +. ||+.++.. ..+...+.++-- -++.+.+|+..-
T Consensus 145 ---~~~v~vGDs~nDl~ml-~~---Ag~~ia~~----ak~~~~~~~~~~--~~~~~~~~~~~~ 194 (203)
T TIGR02137 145 ---YRVIAAGDSYNDTTML-SE---AHAGILFH----APENVIREFPQF--PAVHTYEDLKRE 194 (203)
T ss_pred ---CCEEEEeCCHHHHHHH-Hh---CCCCEEec----CCHHHHHhCCCC--CcccCHHHHHHH
Confidence 3679999999999999 99 99876643 233333433323 346777777653
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.01 E-value=2e-09 Score=102.44 Aligned_cols=108 Identities=19% Similarity=0.236 Sum_probs=85.4
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.+++||+.++|+ ++|++++|+||+++..++.++++ +|++ +++.. ..+|++.++++..+ ..+++|||
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~~----~~~v~~VG 473 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQEK----GRVVAMVG 473 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHHc----CCEEEEEe
Confidence 579999999999 78999999999999999999999 9996 33322 34778888887764 35679999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHhh
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRK 216 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~~ 216 (218)
|+.+|+.++ ++ ||+ ++.||+++. .....+| +++ +++.++...
T Consensus 474 Dg~nD~~al-~~---A~v---gia~g~g~~--~a~~~Ad--vvl~~~~l~~l~~~ 517 (562)
T TIGR01511 474 DGINDAPAL-AQ---ADV---GIAIGAGTD--VAIEAAD--VVLMRNDLNDVATA 517 (562)
T ss_pred CCCccHHHH-hh---CCE---EEEeCCcCH--HHHhhCC--EEEeCCCHHHHHHH
Confidence 999999999 99 885 788887653 3334456 777 477777654
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.3e-09 Score=97.63 Aligned_cols=96 Identities=20% Similarity=0.222 Sum_probs=79.0
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhc-C-------CCCCCceEEcCCCCC----------------
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELA-G-------VTIPPDRIYGLGTGP---------------- 140 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~-g-------l~~~Fd~I~g~d~kp---------------- 140 (218)
+.++||+.++|+ ++|++++|+||++.++++.+|++ + | +.+|||.|++...||
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVET 261 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCC
Confidence 567999999999 88999999999999999999999 6 7 899999999876444
Q ss_pred ---hHH---------H-----HHHHHhcCCCCCCcEEEEcCCh-hhHHHhhc-cCccCCceEEEEec
Q 027821 141 ---KVE---------V-----LKQLQKKPELQGMTLHFVEDRL-ATLKNVIK-EPELDGWNLYLGDW 188 (218)
Q Consensus 141 ---kPe---------~-----l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k-~~~~AGv~~i~V~~ 188 (218)
++. + +..+.+..+....+++||||+. .|+.+| + . +||++++|.-
T Consensus 262 g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~-kk~---~Gw~TvlI~p 324 (343)
T TIGR02244 262 GSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRS-KKK---RGWRTAAIIP 324 (343)
T ss_pred CcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhh-HHh---cCcEEEEEch
Confidence 111 1 1455555566788999999965 699999 6 8 9999999953
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.1e-09 Score=86.69 Aligned_cols=96 Identities=19% Similarity=0.202 Sum_probs=81.7
Q ss_pred CCCCCChHHHHH-hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--C--------CChHHHHHHHHhcCCCC-
Q 027821 88 NRFYPGIPDALK-FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--T--------GPKVEVLKQLQKKPELQ- 155 (218)
Q Consensus 88 ~~l~pGv~e~L~-~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--~--------kpkPe~l~~l~~~~~~~- 155 (218)
.+|=+-.+++|- -...+..+-||..+..+..+|++ +||.+.|+.|++.+ . ||.++.++.+....+++
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 455566778877 22223899999999999999999 99999999998775 2 58889999999999887
Q ss_pred CCcEEEEcCChhhHHHhhccCccCCceEEEEec
Q 027821 156 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDW 188 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~ 188 (218)
+.+++|++||...|++| ++ -|++++.|.-
T Consensus 178 p~~t~FfDDS~~NI~~a-k~---vGl~tvlv~~ 206 (244)
T KOG3109|consen 178 PRNTYFFDDSERNIQTA-KE---VGLKTVLVGR 206 (244)
T ss_pred cCceEEEcCchhhHHHH-Hh---ccceeEEEEe
Confidence 89999999999999999 99 9999998853
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.8e-09 Score=85.43 Aligned_cols=87 Identities=17% Similarity=0.157 Sum_probs=71.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC--------------C--CCChHHHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL--------------G--TGPKVEVLKQ 147 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~--------------d--~kpkPe~l~~ 147 (218)
...++||+.++|+ ++|++++|+|++....++.++++ +|+..+|...+.. . ...|+..+++
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~ 149 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKE 149 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHH
Confidence 3568999999999 89999999999999999999999 9998777543221 1 2256778888
Q ss_pred HHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 148 LQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
+....+++..+++||||+.+|+.++ +.
T Consensus 150 ~~~~~~~~~~~~~~iGDs~~D~~~~-~~ 176 (177)
T TIGR01488 150 LLEESKITLKKIIAVGDSVNDLPML-KL 176 (177)
T ss_pred HHHHhCCCHHHEEEEeCCHHHHHHH-hc
Confidence 8877777778899999999999999 65
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.5e-09 Score=104.92 Aligned_cols=113 Identities=20% Similarity=0.198 Sum_probs=91.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVED 164 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
..++||+.++|+ +.|++++++|++++..++.++++ +|+..+|..+ ...+|.+.++++..+ ..+++||||
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~~---~p~~K~~~i~~l~~~----~~~v~~vGD 720 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAGV---LPDGKAEAIKRLQSQ----GRQVAMVGD 720 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeCC---CHHHHHHHHHHHhhc----CCEEEEEeC
Confidence 578999999999 88999999999999999999999 9997654422 123577777777654 456799999
Q ss_pred ChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 165 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 165 s~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+.+|+.++ ++ ||+ +|.||.++...++.+ |+.+..+++.+|...+
T Consensus 721 g~nD~~al-~~---Agv---gia~g~g~~~a~~~a--d~vl~~~~~~~i~~~i 764 (834)
T PRK10671 721 GINDAPAL-AQ---ADV---GIAMGGGSDVAIETA--AITLMRHSLMGVADAL 764 (834)
T ss_pred CHHHHHHH-Hh---CCe---eEEecCCCHHHHHhC--CEEEecCCHHHHHHHH
Confidence 99999999 99 998 888998887777665 5448888999888765
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.6e-08 Score=94.51 Aligned_cols=108 Identities=13% Similarity=0.105 Sum_probs=79.8
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCC--hHHHHHHHHhcCCCCCCc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGP--KVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kp--kPe~l~~l~~~~~~~~~e 158 (218)
.+++||+.++|+ ++|++++|+||+++..++.++++ +|+ ||.++|++ .+| |++.+. +..+ ..+
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~---~~l~--~~~ 141 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALV---EAFG--ERG 141 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHH---HHhC--ccC
Confidence 457799999999 89999999999999999999999 998 89999886 233 444443 3332 234
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
+.|+|||.+|+.++ +. +| ..++|+-+..-... .+....|..++.+.
T Consensus 142 ~~yvGDS~~Dlp~~-~~---A~-~av~Vn~~~~l~~~-a~~~~~~~~~~~~~ 187 (479)
T PRK08238 142 FDYAGNSAADLPVW-AA---AR-RAIVVGASPGVARA-ARALGPVERVFPPR 187 (479)
T ss_pred eeEecCCHHHHHHH-Hh---CC-CeEEECCCHHHHHH-HHHcCCcceecCCC
Confidence 68999999999999 98 88 88888655432222 22344555555443
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.3e-08 Score=81.85 Aligned_cols=87 Identities=18% Similarity=0.218 Sum_probs=74.1
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCCh-
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRL- 166 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~- 166 (218)
=|.+.+-+. .+|+++.|+||+.+..+....++ +|+. +|+.+ .||-+..+++++.+.++++++|+||||..
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~----fi~~A-~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~ 121 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVP----FIYRA-KKPFGRAFRRALKEMNLPPEEVVMVGDQLF 121 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCc----eeecc-cCccHHHHHHHHHHcCCChhHEEEEcchhh
Confidence 344555555 89999999999999999999999 8864 34433 47999999999999999999999999996
Q ss_pred hhHHHhhccCccCCceEEEEe
Q 027821 167 ATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 167 ~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+|+.+| +. +|+.||.|-
T Consensus 122 TDVlgg-nr---~G~~tIlV~ 138 (175)
T COG2179 122 TDVLGG-NR---AGMRTILVE 138 (175)
T ss_pred hhhhcc-cc---cCcEEEEEE
Confidence 799999 88 999999994
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.76 E-value=1e-08 Score=82.56 Aligned_cols=94 Identities=9% Similarity=-0.094 Sum_probs=74.9
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCC-CCceEEcCCC--CChHHHHHHHHhcCCCCCCcEEEE
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLGT--GPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~-~Fd~I~g~d~--kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
+..-||+.++|+ .+.+.++|.|++.+.+++.++++ ++... +|+.+++.+. ..++. +.+.+...+.+..+++||
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIII 118 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEE
Confidence 457799999999 55699999999999999999999 99875 8999888761 12222 433334445567889999
Q ss_pred cCChhhHHHhhccCccCCceEEEEe
Q 027821 163 EDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 163 GDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
||++.++.++ ++ +|+.+..-.
T Consensus 119 DD~~~~~~~~-~~---NgI~i~~f~ 139 (162)
T TIGR02251 119 DNSPYSYSLQ-PD---NAIPIKSWF 139 (162)
T ss_pred eCChhhhccC-cc---CEeecCCCC
Confidence 9999999999 88 999877654
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.75 E-value=2e-08 Score=85.47 Aligned_cols=87 Identities=17% Similarity=0.323 Sum_probs=70.3
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHH--HHHHHhcCCCC-CCceEEcCCCCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFAD--ALLRELAGVTI-PPDRIYGLGTGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~--~iL~~~~gl~~-~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
....+|||+.++|+ ++|++++|+||++++... ..|++ +|+.. +|+.|++++.-. .+.+..+..+.+..+.++
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~~-~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEIA-VQMILESKKRFDIRNGII 98 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHHH-HHHHHhhhhhccCCCceE
Confidence 34679999999999 789999999999988766 78999 99998 999999987211 246666666665566788
Q ss_pred EEEcCChhhHHHhhcc
Q 027821 160 HFVEDRLATLKNVIKE 175 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~ 175 (218)
++|||+..|++.. ..
T Consensus 99 ~~vGd~~~d~~~~-~~ 113 (242)
T TIGR01459 99 YLLGHLENDIINL-MQ 113 (242)
T ss_pred EEeCCcccchhhh-cC
Confidence 9999999999876 55
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=98.70 E-value=7.6e-08 Score=78.27 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=73.0
Q ss_pred ccccCCCCCChHHHHH---hCCCcEEEEc-CCChHHHHHHHHHhcCCC----------CCCceEEcCCCCChHHHHHHHH
Q 027821 84 WIGANRFYPGIPDALK---FASSRIYIVT-TKQSRFADALLRELAGVT----------IPPDRIYGLGTGPKVEVLKQLQ 149 (218)
Q Consensus 84 ~~~~~~l~pGv~e~L~---~~g~~laIvT-nk~~~~~~~iL~~~~gl~----------~~Fd~I~g~d~kpkPe~l~~l~ 149 (218)
..+...+||+|+++|+ .+|+++|||| +...+.++.+|+. +++. ++|+..--. .+.|-..+.++.
T Consensus 40 ~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~-~gsK~~Hf~~i~ 117 (169)
T PF12689_consen 40 RGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIY-PGSKTTHFRRIH 117 (169)
T ss_dssp T--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEES-SS-HHHHHHHHH
T ss_pred CCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhhee-cCchHHHHHHHH
Confidence 3556789999999999 8999999999 5667899999999 9999 888875221 247888899999
Q ss_pred hcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC
Q 027821 150 KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT 192 (218)
Q Consensus 150 ~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~ 192 (218)
++.+++..+++|++|....++.. +. -||.|+.|.-|..-
T Consensus 118 ~~tgI~y~eMlFFDDe~~N~~~v-~~---lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 118 RKTGIPYEEMLFFDDESRNIEVV-SK---LGVTCVLVPDGLTW 156 (169)
T ss_dssp HHH---GGGEEEEES-HHHHHHH-HT---TT-EEEE-SSS--H
T ss_pred HhcCCChhHEEEecCchhcceee-Ee---cCcEEEEeCCCCCH
Confidence 99999999999999999999999 88 99999999887643
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.7e-07 Score=81.52 Aligned_cols=76 Identities=20% Similarity=0.253 Sum_probs=68.1
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
.||.|.+++.+++..+.+..+++||||+. +||.+| ++ +||.++.|.+|.++.+++......|+++++++.|+..+
T Consensus 189 GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a-~~---~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~ 264 (269)
T COG0647 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGA-KA---AGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITA 264 (269)
T ss_pred CCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHH-HH---cCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhh
Confidence 57999999999999988888999999995 799999 99 99999999999998888776667788999999998876
Q ss_pred c
Q 027821 217 L 217 (218)
Q Consensus 217 ~ 217 (218)
+
T Consensus 265 ~ 265 (269)
T COG0647 265 L 265 (269)
T ss_pred h
Confidence 5
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.9e-07 Score=93.31 Aligned_cols=115 Identities=17% Similarity=0.222 Sum_probs=85.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC-----------------------C-CCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-----------------------G-TGP 140 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~-----------------------d-~kp 140 (218)
.+++||+.++++ ++|+++.++|+.+...+..+.++ +|+..+++.++++ . ...
T Consensus 527 Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred CcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 478999999999 89999999999999999999999 9998777654332 1 112
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHhhc
Q 027821 141 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 217 (218)
Q Consensus 141 kPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~~~ 217 (218)
|-.+++.+... ...+.||||+.+|+.|. ++ |+ ||+.||.+. .+.....+| +++ +++..+...+
T Consensus 606 K~~iv~~lq~~----g~~v~mvGDGvND~pAl-~~---Ad---VGia~g~~g-~~va~~aaD--ivl~dd~~~~i~~~i 670 (884)
T TIGR01522 606 KMKIVKALQKR----GDVVAMTGDGVNDAPAL-KL---AD---IGVAMGQTG-TDVAKEAAD--MILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHHHC----CCEEEEECCCcccHHHH-Hh---CC---eeEecCCCc-CHHHHHhcC--EEEcCCCHHHHHHHH
Confidence 33344444433 34568999999999999 99 88 588888643 334444557 888 5688877643
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.1e-06 Score=73.39 Aligned_cols=113 Identities=10% Similarity=0.003 Sum_probs=77.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHH-H---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEE
Q 027821 59 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL-K---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY 134 (218)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L-~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~ 134 (218)
|.+.+++++..+.|++.|.+. ..+|||+.++| + ++|++++||||+++..++.++++ +|+.. .+.++
T Consensus 73 g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~-l~~~~-~~~~i 142 (211)
T PRK11590 73 GHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFD-TPWLP-RVNLI 142 (211)
T ss_pred CCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-ccccc-cCceE
Confidence 566667777778887777332 46799999999 4 57999999999999999999999 99743 33444
Q ss_pred cCC-----C----CC--h-HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 135 GLG-----T----GP--K-VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 135 g~d-----~----kp--k-Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
|.+ + ++ . .+-..++.+-++.+...+.+-|||.+|+..- .. +|- .++|
T Consensus 143 ~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL-~~---a~~-~~~v 201 (211)
T PRK11590 143 ASQMQRRYGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLL-YF---CQH-RWRV 201 (211)
T ss_pred EEEEEEEEccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHH-Hh---CCC-CEEE
Confidence 443 1 11 1 2223333333222445668999999999999 77 774 3445
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.9e-07 Score=90.34 Aligned_cols=110 Identities=18% Similarity=0.187 Sum_probs=85.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVED 164 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
.+++||+.++++ ++|++++++|+.+...++.+.++ +|+..+++ .....|++.++++... ..+.||||
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~----~~p~~K~~~v~~l~~~-----~~v~mvGD 636 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG----LLPEDKVKAVTELNQH-----APLAMVGD 636 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC----CCHHHHHHHHHHHhcC-----CCEEEEEC
Confidence 489999999999 78999999999999999999999 99974332 1122578888877642 35789999
Q ss_pred ChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 165 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 165 s~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
+.+|+.+. +. |+ +++.+|.++....+.+ |....-+++..|...
T Consensus 637 giNDapAl-~~---A~---vgia~g~~~~~a~~~a--divl~~~~l~~l~~~ 679 (741)
T PRK11033 637 GINDAPAM-KA---AS---IGIAMGSGTDVALETA--DAALTHNRLRGLAQM 679 (741)
T ss_pred CHHhHHHH-Hh---CC---eeEEecCCCHHHHHhC--CEEEecCCHHHHHHH
Confidence 99999999 88 88 7888898776555544 533555777777643
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.2e-07 Score=78.58 Aligned_cols=110 Identities=11% Similarity=0.072 Sum_probs=75.4
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCC-----hHHHHHHHHHhcCCCC---CCceE-EcCCCCChHHHHHHHHhcCCCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQ-----SRFADALLRELAGVTI---PPDRI-YGLGTGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~-----~~~~~~iL~~~~gl~~---~Fd~I-~g~d~kpkPe~l~~l~~~~~~~~~ 157 (218)
.++++.++++ ..+..+.|+|+.+ .+..+.++++ +++.. +++.+ +......|+..++.+++.++++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~ 216 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMK 216 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 4667777766 4566677888754 3445566666 66542 11212 111123689999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
++++|||+.+|+.++ +. ||+ +|.+|... ++++. .++ +++.+..
T Consensus 217 e~i~~GD~~NDi~m~-~~---ag~---~vamgna~-~~lk~-~Ad--~v~~~n~ 259 (272)
T PRK10530 217 NVVAFGDNFNDISML-EA---AGL---GVAMGNAD-DAVKA-RAD--LVIGDNT 259 (272)
T ss_pred HeEEeCCChhhHHHH-Hh---cCc---eEEecCch-HHHHH-hCC--EEEecCC
Confidence 999999999999999 99 895 66778654 45543 456 8876633
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2e-07 Score=74.96 Aligned_cols=88 Identities=23% Similarity=0.283 Sum_probs=63.5
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCC---h-----------HHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHH
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQ---S-----------RFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQL 148 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~---~-----------~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l 148 (218)
..|+|.+.|+ +.|++++|+||.. + +.++.+++. +|+. +..+++.. +||+|.|+..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 4568999999 8999999999972 2 456777887 7765 34334432 89999999999
Q ss_pred HhcCCC----CCCcEEEEcCC-----------hhhHHHhhccCccCCceEE
Q 027821 149 QKKPEL----QGMTLHFVEDR-----------LATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 149 ~~~~~~----~~~e~l~IGDs-----------~~Di~aA~k~~~~AGv~~i 184 (218)
...... +..+++||||+ ..|.+-| .| .|+++.
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA-~N---~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFA-LN---CGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHH-HH---HT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHH-HH---cCCccc
Confidence 888753 77889999996 7889999 99 888754
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.7e-07 Score=83.32 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=56.6
Q ss_pred CCChHHHHHHHHhcC--------C-----CCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCC
Q 027821 138 TGPKVEVLKQLQKKP--------E-----LQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIP 203 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~--------~-----~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p 203 (218)
.||+|.+++.++... + .++++++||||++ +||..| ++ +||.++.|.+|-.+.++. .....|
T Consensus 232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga-~~---~G~~silV~tG~~~~~~~-~~~~~p 306 (321)
T TIGR01456 232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGA-QN---YGWFSCLVKTGVYNGGDD-LKECKP 306 (321)
T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhH-Hh---CCceEEEecccccCCCCC-CCCCCC
Confidence 578888886544333 2 1346899999998 999999 99 999999999994443332 123346
Q ss_pred CeEEcChhHHHhhc
Q 027821 204 RIQLLQLSDFSRKL 217 (218)
Q Consensus 204 ~~~~~~~~~l~~~~ 217 (218)
+++++++.|+.+++
T Consensus 307 ~~vv~~l~e~~~~i 320 (321)
T TIGR01456 307 TLIVNDVFDAVTKI 320 (321)
T ss_pred CEEECCHHHHHHHh
Confidence 79999999999876
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.5e-06 Score=73.01 Aligned_cols=92 Identities=13% Similarity=0.180 Sum_probs=78.2
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--------------CCChHHHHHHHHh
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--------------TGPKVEVLKQLQK 150 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--------------~kpkPe~l~~l~~ 150 (218)
.+++||+.++++ ++|.+++|+|+.....++.+.++ +|++..+...+..+ .+.|-+.+.++..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 579999999999 89999999999999999999999 99987776543221 2356778889999
Q ss_pred cCCCCCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 151 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
+.+++..+++++|||.+|+-+= +. +|.+.+
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml-~~---ag~~ia 184 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPML-EA---AGLPIA 184 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHH-Hh---CCCCeE
Confidence 9888888999999999999999 88 887544
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.3e-06 Score=75.92 Aligned_cols=81 Identities=16% Similarity=0.203 Sum_probs=66.3
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---HHHHHHHHHhcCCCCC-CceEEcCC-CCChHHHHHHHHhcCCCCCCc
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---RFADALLRELAGVTIP-PDRIYGLG-TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---~~~~~iL~~~~gl~~~-Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e 158 (218)
...++||+.++|+ ++|++++|+||+.. +.+...|++ +|+..+ ++.++..+ .++|+.-...+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 4679999999999 89999999999874 456688899 999764 57777665 56888888888777664
Q ss_pred EEEEcCChhhHHHh
Q 027821 159 LHFVEDRLATLKNV 172 (218)
Q Consensus 159 ~l~IGDs~~Di~aA 172 (218)
+++|||+..|+...
T Consensus 191 vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 VLLFGDNLLDFDDF 204 (266)
T ss_pred EEEECCCHHHhhhh
Confidence 58999999999776
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=98.42 E-value=4e-06 Score=70.27 Aligned_cols=110 Identities=14% Similarity=0.078 Sum_probs=76.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH----hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEE
Q 027821 59 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK----FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY 134 (218)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~----~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~ 134 (218)
|.+.+++++..+.|.+.|.+ ...+|||+.++|+ ++|.+++||||+++..++.+.+. .++..-.+.|
T Consensus 72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~~~~i- 141 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHRLNLI- 141 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-ccccccCcEE-
Confidence 77777888888888877733 2468999999994 47999999999999999999988 7774434433
Q ss_pred cCC-----C----CC--h-HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCce
Q 027821 135 GLG-----T----GP--K-VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 135 g~d-----~----kp--k-Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
|.+ . ++ . ++-..++.+-++.+...+.+-|||.+|+..- .. +|-+
T Consensus 142 ~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL-~~---a~~~ 197 (210)
T TIGR01545 142 ASQIERGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLL-AF---CEHR 197 (210)
T ss_pred EEEeEEeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHH-Hh---CCCc
Confidence 432 1 11 1 2222333322222444568999999999998 76 7743
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=8e-07 Score=74.42 Aligned_cols=93 Identities=18% Similarity=0.240 Sum_probs=75.6
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEEcCC--------------
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGLG-------------- 137 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~g~d-------------- 137 (218)
+-|...+++. +.|++++|||-+++ +.++..|++ -+.+.-++.+++.-
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 3455555555 79999999997776 368899997 77776666666421
Q ss_pred -CCChHHH--H--HHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 138 -TGPKVEV--L--KQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 138 -~kpkPe~--l--~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.||.|++ + ++++++.++.++|++||+|+..++++| ++ .|+.++.+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA-~~---lGi~ai~f~ 205 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNA-LK---EGYIALHVT 205 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHH-HH---CCCEEEEcC
Confidence 3588888 7 999999999999999999999999999 98 999999885
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.7e-07 Score=76.97 Aligned_cols=85 Identities=14% Similarity=0.103 Sum_probs=60.1
Q ss_pred hCCCcEEEEcCCChHHHH-HHHHHhcCCCCCCceEE---cCC----CCChHHHHHHHHhcCCCCCCcE-EEEcCCh-hhH
Q 027821 100 FASSRIYIVTTKQSRFAD-ALLRELAGVTIPPDRIY---GLG----TGPKVEVLKQLQKKPELQGMTL-HFVEDRL-ATL 169 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~-~iL~~~~gl~~~Fd~I~---g~d----~kpkPe~l~~l~~~~~~~~~e~-l~IGDs~-~Di 169 (218)
++|-...|+||.+.-... .-... .|...+|+.+. +.. .||+|++++.+.++.+.++.++ +||||+. +|+
T Consensus 142 ~~~~~~~i~tN~d~~~~~~~g~~~-~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di 220 (236)
T TIGR01460 142 AEGDVPFIAANRDDLVRLGDGRFR-PGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDI 220 (236)
T ss_pred hCCCCeEEEECCCCCCCCCCCcEe-ecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHH
Confidence 445357788886631111 11222 45555544432 222 4799999999999888777777 9999998 899
Q ss_pred HHhhccCccCCceEEEEecC
Q 027821 170 KNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 170 ~aA~k~~~~AGv~~i~V~~G 189 (218)
.+| ++ +|+++++|.||
T Consensus 221 ~~A-~~---~G~~~i~v~~G 236 (236)
T TIGR01460 221 LGA-KN---AGFDTLLVLTG 236 (236)
T ss_pred HHH-HH---CCCcEEEEecC
Confidence 999 99 99999999997
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.2e-06 Score=67.86 Aligned_cols=83 Identities=17% Similarity=0.131 Sum_probs=62.7
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCC-CCC-ceEEcCC--CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT-IPP-DRIYGLG--TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~-~~F-d~I~g~d--~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
..+.++||+.++|+ .++++++|+||+.++++..++++ ++.. .+| +.|+|.+ .++...-+..+. +.+...+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~~i~---~~d~~~v 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLLRLF---PADESMV 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHHHHc---CCCcccE
Confidence 44679999999999 77799999999999999999999 9998 589 7788776 233222233332 2245578
Q ss_pred EEEcCChhhHHHh
Q 027821 160 HFVEDRLATLKNV 172 (218)
Q Consensus 160 l~IGDs~~Di~aA 172 (218)
++|+|++.=...-
T Consensus 131 vivDd~~~~~~~~ 143 (156)
T TIGR02250 131 VIIDDREDVWPWH 143 (156)
T ss_pred EEEeCCHHHhhcC
Confidence 9999998555544
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.7e-06 Score=72.89 Aligned_cols=75 Identities=23% Similarity=0.188 Sum_probs=66.1
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhc----cCCCCeEEcChhH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA----ASIPRIQLLQLSD 212 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a----~~~p~~~~~~~~~ 212 (218)
.||.+.++..+.++.++++++|+||||+. +||.-| ++ .|++++.|..|-++.++.+.+ ...|+|.++++.|
T Consensus 223 GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG-~~---~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d 298 (306)
T KOG2882|consen 223 GKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFG-KN---CGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGD 298 (306)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHh-hc---cCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHH
Confidence 47889999999999999999999999996 699999 99 999999999999988887665 3457799999988
Q ss_pred HHhh
Q 027821 213 FSRK 216 (218)
Q Consensus 213 l~~~ 216 (218)
+..-
T Consensus 299 ~~~~ 302 (306)
T KOG2882|consen 299 LLPL 302 (306)
T ss_pred Hhhh
Confidence 8753
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.4e-05 Score=80.32 Aligned_cols=113 Identities=20% Similarity=0.262 Sum_probs=81.2
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC--------Cc-------------------eEEcCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP--------PD-------------------RIYGLG 137 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~--------Fd-------------------~I~g~d 137 (218)
.++.||+.++++ ++|+++.++|+.+.+.+..+.++ +|+... ++ .|++..
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~ 614 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRV 614 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEec
Confidence 478999999999 99999999999999999999999 999641 11 122222
Q ss_pred -CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC--hhHHH
Q 027821 138 -TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ--LSDFS 214 (218)
Q Consensus 138 -~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~--~~~l~ 214 (218)
...|-.+++.+.. . ...+.|+||+.+|+.|. +. |++ ||.+|.++.. ....+| +++.+ +..+.
T Consensus 615 ~P~~K~~iV~~lq~-~---g~~va~iGDG~ND~~al-k~---AdV---Gia~g~g~~~--ak~aAD--~vl~dd~f~~i~ 679 (917)
T TIGR01116 615 EPSHKSELVELLQE-Q---GEIVAMTGDGVNDAPAL-KK---ADI---GIAMGSGTEV--AKEASD--MVLADDNFATIV 679 (917)
T ss_pred CHHHHHHHHHHHHh-c---CCeEEEecCCcchHHHH-Hh---CCe---eEECCCCcHH--HHHhcC--eEEccCCHHHHH
Confidence 1234445565543 2 34568999999999999 99 998 6777755432 333456 88876 77766
Q ss_pred hh
Q 027821 215 RK 216 (218)
Q Consensus 215 ~~ 216 (218)
+.
T Consensus 680 ~~ 681 (917)
T TIGR01116 680 AA 681 (917)
T ss_pred HH
Confidence 54
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.1e-05 Score=63.48 Aligned_cols=96 Identities=17% Similarity=0.226 Sum_probs=74.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHH--hcCCCCCCceEEcCCCCCh--HHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRE--LAGVTIPPDRIYGLGTGPK--VEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~--~~gl~~~Fd~I~g~d~kpk--Pe~l~~l~~~~~~~~~e~l 160 (218)
..+||.+.+.|+ +.|++++|-||.+-..-+-+..+ +-+|..+|+..+-...++| ...+.++....++++.|++
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~eil 181 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEIL 181 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchheE
Confidence 579999999999 89999999999886544434332 1244555555544443344 4578889888888999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEe
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
|+-|.+..+.|| +. +|+.++++.
T Consensus 182 FLSDn~~EL~AA-~~---vGl~t~l~~ 204 (229)
T COG4229 182 FLSDNPEELKAA-AG---VGLATGLAV 204 (229)
T ss_pred EecCCHHHHHHH-Hh---cchheeeee
Confidence 999999999999 88 999999884
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00023 Score=60.86 Aligned_cols=109 Identities=16% Similarity=0.192 Sum_probs=84.1
Q ss_pred ccCCCCCChHHHHH-----hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-----C--------------C--
Q 027821 86 GANRFYPGIPDALK-----FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-----T--------------G-- 139 (218)
Q Consensus 86 ~~~~l~pGv~e~L~-----~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-----~--------------k-- 139 (218)
...++-||+.++++ +.|+.++|+|....-+++.+|++ +|+...|+.|++.. . .
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~ 146 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCP 146 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCC
Confidence 44678999999999 36999999999999999999999 99999999999763 0 1
Q ss_pred ---ChHHHHHHHHhcC---CCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 140 ---PKVEVLKQLQKKP---ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 140 ---pkPe~l~~l~~~~---~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
.|-.+++++.... +..-.+++||||+.+|+=.+ .+ +..-.++...-||.-...+..
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~-~~--L~~~D~v~~R~~~~l~~~i~~ 208 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA-LR--LRPRDVVFPRKGYPLHKLIQK 208 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc-cc--cCCCCEEecCCCChHHHHHhc
Confidence 3455666666552 33457889999999999888 53 133467888888866655544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.2e-05 Score=64.89 Aligned_cols=77 Identities=18% Similarity=0.317 Sum_probs=58.7
Q ss_pred CChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-------------CC--C--hHHHHHHH---
Q 027821 92 PGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-------------TG--P--KVEVLKQL--- 148 (218)
Q Consensus 92 pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-------------~k--p--kPe~l~~l--- 148 (218)
|++.++|+ ++|++++|+|++....++.++++ +|+...+ +++.+ .+ . |...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 44449998 88999999999999999999999 9987522 22111 11 2 88888888
Q ss_pred HhcCCCCCCcEEEEcCChhhHHHh
Q 027821 149 QKKPELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
... ......+++||||.+|+.++
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~l 191 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPML 191 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHh
Confidence 333 34667889999999999987
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.1e-05 Score=70.78 Aligned_cols=53 Identities=15% Similarity=0.073 Sum_probs=46.9
Q ss_pred CChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHH
Q 027821 92 PGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVL 145 (218)
Q Consensus 92 pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l 145 (218)
||+.|+|+ ++|++++|+||+.++.+...|++ +||..||+.|+|++ .+|.|+..
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~Gdv~~~kp~~e~~ 208 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGGHKAEEYSTMSTE 208 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECCccccCCCCcccc
Confidence 89999999 88999999999999999999999 99999999998876 23556544
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=3e-05 Score=60.30 Aligned_cols=117 Identities=12% Similarity=0.198 Sum_probs=85.0
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceE-EcCCCCChHHHHHHHHhcCCCCCCcEE
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRI-YGLGTGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I-~g~d~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
...-++|+.|.+.++ +. ++++|+|+....++....+- .|+. .+.+ .++++--|-++++.+.... .-++
T Consensus 26 atgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~-~gi~--~~rv~a~a~~e~K~~ii~eLkk~~----~k~v 97 (152)
T COG4087 26 ATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEF-VGIP--VERVFAGADPEMKAKIIRELKKRY----EKVV 97 (152)
T ss_pred ccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHH-cCCc--eeeeecccCHHHHHHHHHHhcCCC----cEEE
Confidence 344689999999999 66 99999999999999999998 8975 3444 3444446666777776533 3458
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||..+|+.+- ++ |.+-.+-+.-+-..+..+. .+| +++.++.|++.-+
T Consensus 98 mVGnGaND~laL-r~---ADlGI~tiq~e~v~~r~l~--~AD--vvik~i~e~ldl~ 146 (152)
T COG4087 98 MVGNGANDILAL-RE---ADLGICTIQQEGVPERLLL--TAD--VVLKEIAEILDLL 146 (152)
T ss_pred EecCCcchHHHh-hh---cccceEEeccCCcchHHHh--hch--hhhhhHHHHHHHh
Confidence 999999999999 88 7766555543333333233 447 8899999887654
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.6e-05 Score=66.42 Aligned_cols=88 Identities=13% Similarity=0.261 Sum_probs=64.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHH---HHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFA---DALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~---~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
..++||+.++|+ ++|++++++||++.... ..-|++ +|+...++.|+++.. .....+...+....+.+|
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~~-----~~~~~l~~~~~~~~~~V~ 116 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSSF-----AAAAYLKSINFPKDKKVY 116 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehHH-----HHHHHHHhhccCCCCEEE
Confidence 468999999998 78999999999884433 344577 899888888877642 333333332222223489
Q ss_pred EcCChhhHHHhhccCccCCceEEE
Q 027821 162 VEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~i~ 185 (218)
|+++..+.+.+ ++ +|+.+++
T Consensus 117 viG~~~~~~~l-~~---~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEEL-EL---AGFQYLG 136 (311)
T ss_pred EEcCHHHHHHH-HH---CCCEEec
Confidence 99999999999 88 9998765
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00015 Score=60.14 Aligned_cols=84 Identities=19% Similarity=0.367 Sum_probs=67.8
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC--CC-ceE--------EcCC-------CCChHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI--PP-DRI--------YGLG-------TGPKVEVL 145 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~--~F-d~I--------~g~d-------~kpkPe~l 145 (218)
..++-|||+|+.. ++|.+++++|+.-+..+..+-.+ +||.. .| ..+ .|.+ ++.|++.+
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 5678999999999 99999999999999999999999 99974 11 111 1212 45889999
Q ss_pred HHHHhcCCCCCCcEEEEcCChhhHHHhhc
Q 027821 146 KQLQKKPELQGMTLHFVEDRLATLKNVIK 174 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA~k 174 (218)
+.+.+.. +-..+.||||..+|++|. .
T Consensus 165 ~~lrk~~--~~~~~~mvGDGatDlea~-~ 190 (227)
T KOG1615|consen 165 ALLRKNY--NYKTIVMVGDGATDLEAM-P 190 (227)
T ss_pred HHHHhCC--ChheeEEecCCccccccC-C
Confidence 8888844 556779999999999988 5
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00016 Score=60.23 Aligned_cols=78 Identities=14% Similarity=0.094 Sum_probs=59.4
Q ss_pred CCCcEEE-EcCCChHHHHHHHHHhcCCC----CCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 101 ASSRIYI-VTTKQSRFADALLRELAGVT----IPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 101 ~g~~laI-vTnk~~~~~~~iL~~~~gl~----~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
.++.+.+ .|++..+.+...+++ .++. .+|..|.+.+. .|+..++.+++.++++++++++|||+.+|+.+- +.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml-~~ 213 (221)
T TIGR02463 137 ASVPLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLL-EV 213 (221)
T ss_pred CCccEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHH-Hh
Confidence 3455555 567777778888888 7876 45544554442 577788999999999999999999999999999 98
Q ss_pred CccCCceEE
Q 027821 176 PELDGWNLY 184 (218)
Q Consensus 176 ~~~AGv~~i 184 (218)
+|..++
T Consensus 214 ---ag~~va 219 (221)
T TIGR02463 214 ---ADYAVV 219 (221)
T ss_pred ---CCceEE
Confidence 886543
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=7.3e-05 Score=65.78 Aligned_cols=46 Identities=17% Similarity=0.041 Sum_probs=43.3
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
-||+.++|+ ++|++++|+||++++.+...|++ +|+..+|+.|+|++
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g 198 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGG 198 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECC
Confidence 389999999 88999999999999999999999 99999999998876
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00017 Score=56.27 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=72.2
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHH----HHHHhcC--CCCC
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVL----KQLQKKP--ELQG 156 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l----~~l~~~~--~~~~ 156 (218)
..+.+||.|.++|+ +.|+-++.+|-+....+-..|+. +++..||+.++-....-|-.|+ +.+..+- .+.+
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP 116 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKP 116 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCc
Confidence 34689999999999 88999999999999999999999 9999999988754322233344 3333322 4578
Q ss_pred CcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 157 MTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
.+++|++|+...+..- +. .+-.++|+
T Consensus 117 ~~Ivy~DDR~iH~~~I-we-~~G~V~~~ 142 (164)
T COG4996 117 SEIVYLDDRRIHFGNI-WE-YLGNVKCL 142 (164)
T ss_pred ceEEEEecccccHHHH-HH-hcCCeeee
Confidence 9999999999888777 43 22334544
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00044 Score=56.21 Aligned_cols=94 Identities=20% Similarity=0.213 Sum_probs=65.2
Q ss_pred CCCCCChHHHHH---hCCC--cEEEEcCC-------ChHHHHHHHHHhcCCCCCCceEEcCCCCCh--HHHHHHHHhcCC
Q 027821 88 NRFYPGIPDALK---FASS--RIYIVTTK-------QSRFADALLRELAGVTIPPDRIYGLGTGPK--VEVLKQLQKKPE 153 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~--~laIvTnk-------~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpk--Pe~l~~l~~~~~ 153 (218)
..+.|.+.+.++ +.+. ++.||||+ ....++.+-+. +|+. ++.-...||. .++++.+.....
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~kKP~~~~~i~~~~~~~~~ 132 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAKKPGCFREILKYFKCQKV 132 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCCCCccHHHHHHHHhhccC
Confidence 346667777776 4444 59999998 47778888888 8853 3323334453 345555544311
Q ss_pred -CCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCC
Q 027821 154 -LQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 154 -~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
..+.|+++|||.. +|+.+| .. .|+.+|.|+-|-
T Consensus 133 ~~~p~eiavIGDrl~TDVl~g-N~---~G~~tilv~~gv 167 (168)
T PF09419_consen 133 VTSPSEIAVIGDRLFTDVLMG-NR---MGSYTILVTDGV 167 (168)
T ss_pred CCCchhEEEEcchHHHHHHHh-hc---cCceEEEEecCc
Confidence 2578999999996 799999 87 999999998763
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00028 Score=58.62 Aligned_cols=95 Identities=9% Similarity=0.037 Sum_probs=66.2
Q ss_pred CcEEEEcCCChHHHHHHHHHhcCCCCCCc---eEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC
Q 027821 103 SRIYIVTTKQSRFADALLRELAGVTIPPD---RIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 103 ~~laIvTnk~~~~~~~iL~~~~gl~~~Fd---~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A 179 (218)
..++++|++..+.+...+++ .++..++. .-+......|...++.+++.++++..++++|||+.+|+.+. +. +
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml-~~---a 182 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLF-RV---V 182 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH-Hh---C
Confidence 44566788888888888888 88754321 11222234788899999999988888999999999999999 99 8
Q ss_pred CceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 180 GWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 180 Gv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
|+.++ + |-+ .+++++ .++ ++..+
T Consensus 183 g~~va-m--~na-~~~~k~-~A~--~v~~~ 205 (215)
T TIGR01487 183 GFKVA-V--ANA-DDQLKE-IAD--YVTSN 205 (215)
T ss_pred CCeEE-c--CCc-cHHHHH-hCC--EEcCC
Confidence 86544 3 223 344444 235 77654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00039 Score=57.97 Aligned_cols=92 Identities=16% Similarity=0.075 Sum_probs=65.4
Q ss_pred cEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC---C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccC
Q 027821 104 RIYIVTTKQSRFADALLRELAGVTIPPDRIYGL---G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 176 (218)
Q Consensus 104 ~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~---d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~ 176 (218)
.+.+.+++..+.+...+++ ++.. +..+.+. + ...|+..++.+++.+++++.++++|||+.+|+.+. +.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~-~~- 191 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMF-EV- 191 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHH-Hh-
Confidence 4566677777888888888 7642 3333332 2 23789999999999998999999999999999999 98
Q ss_pred ccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 177 ELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 177 ~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
+|+.+ ++.- .+ +++++ .++ ++..+
T Consensus 192 --ag~~v-am~N--a~-~~vk~-~a~--~v~~~ 215 (230)
T PRK01158 192 --AGFGV-AVAN--AD-EELKE-AAD--YVTEK 215 (230)
T ss_pred --cCceE-EecC--cc-HHHHH-hcc--eEecC
Confidence 88754 4432 33 34444 345 77765
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00018 Score=61.26 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=54.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC-------CceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD-------GWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A-------Gv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.|...++.++...+....+++||||+.+|+.+. +. + |..++.|.+|- ....++ ++++++++
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~-~~---~~~~~~~~g~~~v~v~~g~------~~~~A~--~~~~~~~~ 234 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAF-RV---VNNQWGNYGFYPVPIGSGS------KKTVAK--FHLTGPQQ 234 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHH-HH---HhcccCCCCeEEEEEecCC------cCCCce--EeCCCHHH
Confidence 567899999988887778899999999999999 88 7 67788887662 123445 99999999
Q ss_pred HHhhcC
Q 027821 213 FSRKLK 218 (218)
Q Consensus 213 l~~~~~ 218 (218)
+.++|+
T Consensus 235 v~~~L~ 240 (244)
T TIGR00685 235 VLEFLG 240 (244)
T ss_pred HHHHHH
Confidence 988873
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00037 Score=64.85 Aligned_cols=95 Identities=19% Similarity=0.256 Sum_probs=63.1
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCC--------CCCCceEEcCCCCChH----------------
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGV--------TIPPDRIYGLGTGPKV---------------- 142 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl--------~~~Fd~I~g~d~kpkP---------------- 142 (218)
.=|.+..+|+ ++|.++.++||++-.++..+++.++|- .++||.|++...||.-
T Consensus 184 k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~ 263 (448)
T PF05761_consen 184 KDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGK 263 (448)
T ss_dssp --CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSS
T ss_pred CCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCc
Confidence 3477888888 889999999999999999999986654 5899999865432220
Q ss_pred -------------H-----HHHHHHhcCCCCCCcEEEEcCChh-hHHHhhccCccCCceEEEEe
Q 027821 143 -------------E-----VLKQLQKKPELQGMTLHFVEDRLA-TLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 143 -------------e-----~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~k~~~~AGv~~i~V~ 187 (218)
. -+..+.+..+....+++||||+.. ||...-+. .||+|++|-
T Consensus 264 l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~---~gWrT~~Ii 324 (448)
T PF05761_consen 264 LKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKR---HGWRTAAII 324 (448)
T ss_dssp EECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHH---H-SEEEEE-
T ss_pred cccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccc---cceEEEEEe
Confidence 0 014444445555678999999874 77777354 699999995
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00036 Score=60.29 Aligned_cols=78 Identities=12% Similarity=0.027 Sum_probs=57.7
Q ss_pred hCCCcEEEE---cCCChHHHHHHHHHhcCCC----CCCceEEcCCCCChHHHHHHHHhcCCCCC-CcEEEEcCChhhHHH
Q 027821 100 FASSRIYIV---TTKQSRFADALLRELAGVT----IPPDRIYGLGTGPKVEVLKQLQKKPELQG-MTLHFVEDRLATLKN 171 (218)
Q Consensus 100 ~~g~~laIv---Tnk~~~~~~~iL~~~~gl~----~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~-~e~l~IGDs~~Di~a 171 (218)
..++...++ |++..+.+...+++ .++. .+|..|...+ .|...++.+++..++++ .++++|||+.+|+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m 222 (273)
T PRK00192 146 DREFSEPFLWNGSEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLPM 222 (273)
T ss_pred hcccCCceeecCchHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHHH
Confidence 344554444 66666677777777 7775 4444454444 67778999998888899 999999999999999
Q ss_pred hhccCccCCceEE
Q 027821 172 VIKEPELDGWNLY 184 (218)
Q Consensus 172 A~k~~~~AGv~~i 184 (218)
+ +. +|+.++
T Consensus 223 ~-~~---ag~~va 231 (273)
T PRK00192 223 L-EA---ADIAVV 231 (273)
T ss_pred H-Hh---CCeeEE
Confidence 9 98 986544
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00017 Score=60.40 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=59.7
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhh-HHHhhccCccCCceEEEEecC-CCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLAT-LKNVIKEPELDGWNLYLGDWG-YNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~D-i~aA~k~~~~AGv~~i~V~~G-~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
.||.|..++..+...++++++++||||-.+| +-.| ++ .||+.|.|.+| |...++. .-.+-|+..++++.|-.+
T Consensus 180 GKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGA-q~---~GMrgilVkTGK~rpsDe~-k~~~~p~~~~d~f~~AVd 254 (262)
T KOG3040|consen 180 GKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGA-QA---CGMRGILVKTGKFRPSDEE-KPPVPPDLTADNFADAVD 254 (262)
T ss_pred cCCCHHHHHHHHHhcCCChHHheEEccccccchhhH-hh---hcceeEEeeccccCCcccc-cCCCCcchhhhhHHHHHH
Confidence 4688888999999898999999999998764 6666 99 99999999988 4443443 335667788999888777
Q ss_pred hc
Q 027821 216 KL 217 (218)
Q Consensus 216 ~~ 217 (218)
|+
T Consensus 255 ~I 256 (262)
T KOG3040|consen 255 LI 256 (262)
T ss_pred HH
Confidence 64
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00026 Score=56.70 Aligned_cols=84 Identities=20% Similarity=0.277 Sum_probs=69.2
Q ss_pred CCChH-HHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhH
Q 027821 91 YPGIP-DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATL 169 (218)
Q Consensus 91 ~pGv~-e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di 169 (218)
.+|.- .+|.+.|++++|.|.+....++.-.+. +|+...|-.+ ..|-..+..++.++++.++++.||||-.+|+
T Consensus 39 ~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~qG~-----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 39 RDGHGIKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQGI-----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred cCcHHHHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeeech-----HhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 35543 445599999999999999999999999 9998665422 3666788999999999999999999999999
Q ss_pred HHhhccCccCCceEE
Q 027821 170 KNVIKEPELDGWNLY 184 (218)
Q Consensus 170 ~aA~k~~~~AGv~~i 184 (218)
-.= ++ -|+.+.
T Consensus 113 pvm-~~---vGls~a 123 (170)
T COG1778 113 PVM-EK---VGLSVA 123 (170)
T ss_pred HHH-HH---cCCccc
Confidence 988 77 777554
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0013 Score=54.46 Aligned_cols=92 Identities=11% Similarity=0.024 Sum_probs=63.4
Q ss_pred cEEEEcCCChHHHHHHHHHhcCCCCCCceEEc---CC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccC
Q 027821 104 RIYIVTTKQSRFADALLRELAGVTIPPDRIYG---LG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 176 (218)
Q Consensus 104 ~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g---~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~ 176 (218)
...+.+....+.+..++++ ++.. +..+.+ .+ ..+|+..++.+++.++++..++++|||+.+|+.+. +.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~-~~- 183 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKE-LGLN--LVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLF-EV- 183 (225)
T ss_pred eEEEeecCCHHHHHHHHHh-cCce--EEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHH-Hh-
Confidence 3456666677788888888 8764 111111 12 34889999999999999999999999999999999 98
Q ss_pred ccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 177 ELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 177 ~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
+|+. +++ |-.. +++++ .++ ++..+
T Consensus 184 --ag~~-vam--~Na~-~~~k~-~A~--~vt~~ 207 (225)
T TIGR01482 184 --PGFG-VAV--ANAQ-PELKE-WAD--YVTES 207 (225)
T ss_pred --cCce-EEc--CChh-HHHHH-hcC--eecCC
Confidence 8874 444 3233 34444 335 66544
|
catalyze the same reaction as SPP. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.002 Score=54.84 Aligned_cols=81 Identities=14% Similarity=0.145 Sum_probs=58.6
Q ss_pred hCCCcEEEEcCCCh-----HHHHHHHHHhcCCCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCCh
Q 027821 100 FASSRIYIVTTKQS-----RFADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRL 166 (218)
Q Consensus 100 ~~g~~laIvTnk~~-----~~~~~iL~~~~gl~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~ 166 (218)
+.-+++.+.+.+.. ..+...+.+ .|+. +..++++. ..+|...++.+++.++++..++++|||+.
T Consensus 117 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ 193 (249)
T TIGR01485 117 QRPHKVSFFLDPEAAPEVIKQLTEMLKE-TGLD--VKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG 193 (249)
T ss_pred cCCeeEEEEechhhhhHHHHHHHHHHHh-cCCC--EEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh
Confidence 44567777665432 233445555 5553 34455442 34999999999999998999999999999
Q ss_pred hhHHHhhccCccCCceEEEEe
Q 027821 167 ATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 167 ~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+|+.+. +. ++..+++|.
T Consensus 194 ND~~ml-~~---~~~~~va~~ 210 (249)
T TIGR01485 194 NDIELF-EI---GSVRGVIVS 210 (249)
T ss_pred hHHHHH-Hc---cCCcEEEEC
Confidence 999999 87 788888885
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0045 Score=52.16 Aligned_cols=98 Identities=12% Similarity=-0.016 Sum_probs=63.1
Q ss_pred CCCcEEEEcCCC----hHHHHHHHHHhcCCCCCCceEEcC----C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhh
Q 027821 101 ASSRIYIVTTKQ----SRFADALLRELAGVTIPPDRIYGL----G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLAT 168 (218)
Q Consensus 101 ~g~~laIvTnk~----~~~~~~iL~~~~gl~~~Fd~I~g~----d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~D 168 (218)
..+++.+..... ...+...+++ .+.. +..+++. + ..+|+..++.+++.++++..++++|||+.+|
T Consensus 111 ~~~~i~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD 187 (236)
T TIGR02471 111 GPFKISYLLDPEGEPILPQIRQRLRQ-QSQA--AKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGND 187 (236)
T ss_pred CCeeEEEEECcccchHHHHHHHHHHh-ccCC--EEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccH
Confidence 346666665432 1234455665 5532 3445554 2 3499999999999998888899999999999
Q ss_pred HHHhhccCccCCceEEEEecCCCCHHHHHhccCCCC-eEEcC
Q 027821 169 LKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPR-IQLLQ 209 (218)
Q Consensus 169 i~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~-~~~~~ 209 (218)
+.+. +. +|. .++| |...++ +++....|. ++.++
T Consensus 188 ~~ml-~~---~~~-~iav--~na~~~-~k~~a~~~~~~v~~~ 221 (236)
T TIGR02471 188 EEML-RG---LTL-GVVV--GNHDPE-LEGLRHQQRIYFANN 221 (236)
T ss_pred HHHH-cC---CCc-EEEE--cCCcHH-HHHhhcCCcEEEcCC
Confidence 9999 88 774 3334 544444 444433344 55554
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0041 Score=60.75 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=69.8
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+-||+.+.++ +.|+++.++|+.+...+..+-++ +|++++ ++.. ...|-+.++.+..+-+ .+.|+|
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v----~a~~~PedK~~~v~~lq~~g~----~VamvG 515 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDF----IAEATPEDKIALIRQEQAEGK----LVAMTG 515 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEE----EcCCCHHHHHHHHHHHHHcCC----eEEEEC
Confidence 478899999999 88999999999999999999999 998653 3322 2255667777765432 468999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHH
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKE 195 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~ 195 (218)
|..||.-+- +. |++. +..|-++...
T Consensus 516 DG~NDapAL-~~---AdvG---iAm~~gt~~a 540 (675)
T TIGR01497 516 DGTNDAPAL-AQ---ADVG---VAMNSGTQAA 540 (675)
T ss_pred CCcchHHHH-Hh---CCEe---EEeCCCCHHH
Confidence 999999999 88 8864 3345444433
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0014 Score=53.71 Aligned_cols=98 Identities=15% Similarity=0.039 Sum_probs=69.3
Q ss_pred cccccccCCCCCChHHHHH---hCCCcEEEEcCCChHH---HHHHHHHhcCCCCCCceEEcCCCCChHHHH--HHHHhcC
Q 027821 81 LTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGLGTGPKVEVL--KQLQKKP 152 (218)
Q Consensus 81 ~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~---~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l--~~l~~~~ 152 (218)
.+.|.+..-|..-+++++. ++|-+++.+|++.+.. +...|.+-+.|...--+++.++ ||||.-+ ...+.+.
T Consensus 106 n~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-k~k~~qy~Kt~~i~~~ 184 (237)
T COG3700 106 NNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-KPKPGQYTKTQWIQDK 184 (237)
T ss_pred hcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-CCCcccccccHHHHhc
Confidence 4556777778888889988 8999999999877643 3444533277776666677776 4677655 2333333
Q ss_pred CCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 153 ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
++. ++-|||.+||.|| |. +|++-|-+.
T Consensus 185 ~~~----IhYGDSD~Di~AA-ke---aG~RgIRil 211 (237)
T COG3700 185 NIR----IHYGDSDNDITAA-KE---AGARGIRIL 211 (237)
T ss_pred Cce----EEecCCchhhhHH-Hh---cCccceeEE
Confidence 322 6899999999999 99 777776664
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0031 Score=51.97 Aligned_cols=83 Identities=17% Similarity=0.203 Sum_probs=62.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce--EEcCC------------------CC-ChH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR--IYGLG------------------TG-PKV 142 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~--I~g~d------------------~k-pkP 142 (218)
..++=||..++.+ +++++..|+|+...-++..+++. .+=...++. |++.+ -+ .|+
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~ 149 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS 149 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hccccceeeeEEeecCceEcCCCceeeecCCccccCCCcc
Confidence 3678899999999 89999999999999999999999 652222221 12221 12 567
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 143 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 143 e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
..+..+.+.++ .++|+||+.+|+.|| +.
T Consensus 150 ~vI~~l~e~~e----~~fy~GDsvsDlsaa-kl 177 (220)
T COG4359 150 SVIHELSEPNE----SIFYCGDSVSDLSAA-KL 177 (220)
T ss_pred hhHHHhhcCCc----eEEEecCCcccccHh-hh
Confidence 77777777654 369999999999999 87
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0011 Score=56.04 Aligned_cols=104 Identities=22% Similarity=0.258 Sum_probs=76.9
Q ss_pred cCCCCCChHHHHH---hCC-CcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-----CC------------------
Q 027821 87 ANRFYPGIPDALK---FAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-----TG------------------ 139 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g-~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-----~k------------------ 139 (218)
..+.-||+.++++ +.| +.+.|+|-.+.-+++.+|++ +|+.+.|+.|++.. ++
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPs 160 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPS 160 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCch
Confidence 3578899999999 555 49999999999999999999 99999999998753 00
Q ss_pred --ChHHHHHHHHh---cCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 140 --PKVEVLKQLQK---KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 140 --pkPe~l~~l~~---~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
.|--++.++.. +-++.-++.+||||+-+|+=.-.+- .+..++...-||.-..
T Consensus 161 NmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~L---r~~D~ampRkgfpl~k 217 (256)
T KOG3120|consen 161 NMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRL---RACDVAMPRKGFPLWK 217 (256)
T ss_pred hhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhc---ccCceecccCCCchHh
Confidence 12223333322 2244556789999999998766344 7778887777875544
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0021 Score=52.67 Aligned_cols=106 Identities=18% Similarity=0.156 Sum_probs=65.1
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChH-------HHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSR-------FADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPEL 154 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~-------~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~ 154 (218)
....+|+||+.|+|+ +.|..+.++|+.+.. ....-|++.+|...+-+.+++.+ |. ..
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~-K~----------~v-- 135 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD-KT----------LV-- 135 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS-GG----------GC--
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC-CC----------eE--
Confidence 455789999999999 788788888876543 44555666245433345556544 21 11
Q ss_pred CCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 155 QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
.+. ++|+|++..+..+ .+ +|+++|....-|+.... .-.-+.+.+|+.+.
T Consensus 136 ~~D--vlIDD~~~n~~~~-~~---~g~~~iLfd~p~Nr~~~-------~~~Rv~~W~ei~~~ 184 (191)
T PF06941_consen 136 GGD--VLIDDRPHNLEQF-AN---AGIPVILFDQPYNRDES-------NFPRVNNWEEIEDL 184 (191)
T ss_dssp --S--EEEESSSHHHSS--SS---ESSEEEEE--GGGTT---------TSEEE-STTSHHHH
T ss_pred ecc--EEecCChHHHHhc-cC---CCceEEEEcCCCCCCCC-------CCccCCCHHHHHHH
Confidence 233 7999999999999 88 99999999877655432 22567888877543
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.012 Score=57.67 Aligned_cols=107 Identities=18% Similarity=0.165 Sum_probs=76.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.++-||+.+.++ +.|+++.++|+-+...+..+-++ +|+++ +++.. +..|-+.++.+..+-+ -+.|+|
T Consensus 444 D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~----v~A~~~PedK~~iV~~lQ~~G~----~VaMtG 514 (679)
T PRK01122 444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDD----FLAEATPEDKLALIRQEQAEGR----LVAMTG 514 (679)
T ss_pred ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcE----EEccCCHHHHHHHHHHHHHcCC----eEEEEC
Confidence 467899999999 88999999999999999999999 99965 33333 2356667777776432 247999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc--ChhHHH
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFS 214 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~--~~~~l~ 214 (218)
|..||.-|= +. |.+ |+.-|.++.-..+ .+| .++. ++..+.
T Consensus 515 DGvNDAPAL-a~---ADV---GIAMgsGTdvAke--AAD--iVLldd~~s~Iv 556 (679)
T PRK01122 515 DGTNDAPAL-AQ---ADV---GVAMNSGTQAAKE--AGN--MVDLDSNPTKLI 556 (679)
T ss_pred CCcchHHHH-Hh---CCE---eEEeCCCCHHHHH--hCC--EEEeCCCHHHHH
Confidence 999999998 87 775 4445544443333 335 5442 455444
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.011 Score=58.13 Aligned_cols=111 Identities=18% Similarity=0.227 Sum_probs=80.4
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVED 164 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
..+-|+..++++ +.|+++.+.|+-+++.++.+-++ +||++++..+ -+..|-+.++++..+- ..+.||||
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Ael---lPedK~~~V~~l~~~g----~~VamVGD 607 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAEL---LPEDKAEIVRELQAEG----RKVAMVGD 607 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhheccC---CcHHHHHHHHHHHhcC----CEEEEEeC
Confidence 578899999999 99999999999999999999999 9996554322 1336677888888543 34589999
Q ss_pred ChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 165 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 165 s~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
..||.-|= .. |.+ |+.-|.++.-..+.++-. .+=+++.++..
T Consensus 608 GINDAPAL-A~---AdV---GiAmG~GtDvA~eaADvv--L~~~dL~~v~~ 649 (713)
T COG2217 608 GINDAPAL-AA---ADV---GIAMGSGTDVAIEAADVV--LMRDDLSAVPE 649 (713)
T ss_pred CchhHHHH-hh---cCe---eEeecCCcHHHHHhCCEE--EecCCHHHHHH
Confidence 99999887 66 553 555565554444444322 44455766654
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.018 Score=56.27 Aligned_cols=107 Identities=15% Similarity=0.096 Sum_probs=76.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.++-||+.+.++ +.|+++.++|+-+...+..+-++ +|++++| +.- +..|-+.++.+..+- .-+.|+|
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~----A~~~PedK~~iV~~lQ~~G----~~VaMtG 510 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFV----AECKPEDKINVIREEQAKG----HIVAMTG 510 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEE----cCCCHHHHHHHHHHHHhCC----CEEEEEC
Confidence 478899999999 78999999999999999999999 9997543 222 225556677776542 2357999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHH
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFS 214 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~ 214 (218)
|..||.-|= +. |.+ |+.-|.++.-..+ .+| .++ +++..+.
T Consensus 511 DGvNDAPAL-a~---ADV---GIAMgsGTdvAke--AAD--iVLldd~ls~Iv 552 (673)
T PRK14010 511 DGTNDAPAL-AE---ANV---GLAMNSGTMSAKE--AAN--LIDLDSNPTKLM 552 (673)
T ss_pred CChhhHHHH-Hh---CCE---EEEeCCCCHHHHH--hCC--EEEcCCCHHHHH
Confidence 999999998 87 775 5555544443333 345 554 3455554
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.013 Score=43.48 Aligned_cols=83 Identities=20% Similarity=0.310 Sum_probs=48.4
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChH---HHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSR---FADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~---~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
...++||+.|+|+ ++|.++.++||++.. .....|++ +|+.--.+.|+++. ......+.+.. ....++
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~-~Gi~~~~~~i~ts~-----~~~~~~l~~~~-~~~~v~ 84 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK-LGIPVDEDEIITSG-----MAAAEYLKEHK-GGKKVY 84 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH-TTTT--GGGEEEHH-----HHHHHHHHHHT-TSSEEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh-cCcCCCcCEEEChH-----HHHHHHHHhcC-CCCEEE
Confidence 3578999999999 889999999997743 34455577 88875555555432 33333333311 244567
Q ss_pred EEcCChhhHHHhhccCccCCc
Q 027821 161 FVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv 181 (218)
+||-. ...+.. +. +|+
T Consensus 85 vlG~~-~l~~~l-~~---~G~ 100 (101)
T PF13344_consen 85 VLGSD-GLREEL-RE---AGF 100 (101)
T ss_dssp EES-H-HHHHHH-HH---TTE
T ss_pred EEcCH-HHHHHH-HH---cCC
Confidence 78754 333333 55 654
|
... |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.044 Score=55.58 Aligned_cols=111 Identities=20% Similarity=0.185 Sum_probs=76.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc-----------------------eEEcCC-CCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPD-----------------------RIYGLG-TGP 140 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd-----------------------~I~g~d-~kp 140 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +|+...-. .|++.- +..
T Consensus 578 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~ 656 (941)
T TIGR01517 578 DPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLD 656 (941)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHH
Confidence 378899999999 88999999999999999999999 99963211 233332 224
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecC-CCCHHHHHhccCCCCeEEc--ChhHHH
Q 027821 141 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG-YNTQKEREEAASIPRIQLL--QLSDFS 214 (218)
Q Consensus 141 kPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G-~~~~~~l~~a~~~p~~~~~--~~~~l~ 214 (218)
|-.+++.+.+. + .-+.|+||..||.-|= ++ |.+ |+.-| .++. .....+| +++. ++..+.
T Consensus 657 K~~iV~~lq~~-g---~vVam~GDGvNDapAL-k~---AdV---GIAmg~~gtd--vAk~aAD--ivL~dd~f~~I~ 718 (941)
T TIGR01517 657 KQLLVLMLKDM-G---EVVAVTGDGTNDAPAL-KL---ADV---GFSMGISGTE--VAKEASD--IILLDDNFASIV 718 (941)
T ss_pred HHHHHHHHHHC-C---CEEEEECCCCchHHHH-Hh---CCc---ceecCCCccH--HHHHhCC--EEEecCCHHHHH
Confidence 45566666653 2 2457999999999998 88 776 34345 2332 2333456 6665 455444
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.032 Score=47.61 Aligned_cols=81 Identities=17% Similarity=0.095 Sum_probs=57.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHH---HHHHHHHhcCCCCCCceEEcC--CCCC------hHHHHHHHHhcC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGL--GTGP------KVEVLKQLQKKP 152 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~---~~~iL~~~~gl~~~Fd~I~g~--d~kp------kPe~l~~l~~~~ 152 (218)
..++.||+.++++ ++|++++++|+++... +..-|++ .|+..+ +.++-. +... |.+...++..+
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~- 194 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEE- 194 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhC-
Confidence 4689999999999 8999999999999766 7788888 898876 444332 2122 34444455432
Q ss_pred CCCCCcEEEEcCChhhHHHh
Q 027821 153 ELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA 172 (218)
+..-. ..|||..+|+..+
T Consensus 195 GYrIv--~~iGDq~sDl~G~ 212 (229)
T TIGR01675 195 GYRIW--GNIGDQWSDLLGS 212 (229)
T ss_pred CceEE--EEECCChHHhcCC
Confidence 22222 5899999999665
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.043 Score=46.62 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
.|...++.+++.++++..++++|||+.+|+.+. +. +|+.++ + |-. .+.++. .++ +++.+..
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~-~~---~~~~~a-~--~na-~~~~k~-~a~--~~~~~n~ 248 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEML-EA---AGYGVA-M--GNA-DEELKA-LAD--YVTDSNN 248 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHH-Hh---CCceeE-e--cCc-hHHHHH-hCC--EEecCCC
Confidence 788899999999988889999999999999999 98 887533 3 333 344444 345 7766543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.04 Score=54.86 Aligned_cols=110 Identities=16% Similarity=0.174 Sum_probs=79.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+-|++..++. +.|++++++|+-+...++.+-++ .| +|.|++.- ...|.+.++++..+-+ .+.|||
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~~~----~VaMVG 792 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKNGG----PVAMVG 792 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhcCC----cEEEEe
Confidence 467899988888 89999999999999999999999 99 67777765 4477889999987643 347999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
|..||--|= .. |. +|+.-|.++.-..+. +|=-.+-+++.+++.
T Consensus 793 DGINDaPAL-A~---Ad---VGIaig~gs~vAiea--ADIVLmrn~L~~v~~ 835 (951)
T KOG0207|consen 793 DGINDAPAL-AQ---AD---VGIAIGAGSDVAIEA--ADIVLMRNDLRDVPF 835 (951)
T ss_pred CCCCccHHH-Hh---hc---cceeeccccHHHHhh--CCEEEEccchhhhHH
Confidence 999998766 44 43 345555554433333 351133455666543
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.045 Score=56.23 Aligned_cols=112 Identities=17% Similarity=0.176 Sum_probs=74.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC----------ceEE--------------------
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP----------DRIY-------------------- 134 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F----------d~I~-------------------- 134 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +||.... +.++
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 378899999999 89999999999999999999999 9995321 1122
Q ss_pred ---cCC-CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC-
Q 027821 135 ---GLG-TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ- 209 (218)
Q Consensus 135 ---g~d-~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~- 209 (218)
+.. +..|-++++.+... + .-+.|+||..||.-|= +. |++- +.-|....+. ....+| +++.+
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~~-g---~~Vam~GDGvNDapaL-k~---AdVG---IAmg~~gt~v-ak~aAD--ivl~dd 789 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHRR-K---AFCAMTGDGVNDSPSL-KM---ANVG---IAMGINGSDV-AKDASD--IVLSDD 789 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHhc-C---CeeEEeCCCcchHHHH-Hh---CCcc---EecCCCccHH-HHHhcC--EEEecC
Confidence 211 11334455555543 2 2357999999999998 88 8763 3345322233 233456 66643
Q ss_pred -hhHHH
Q 027821 210 -LSDFS 214 (218)
Q Consensus 210 -~~~l~ 214 (218)
+..+.
T Consensus 790 ~f~~I~ 795 (1053)
T TIGR01523 790 NFASIL 795 (1053)
T ss_pred CHHHHH
Confidence 55544
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.073 Score=53.59 Aligned_cols=85 Identities=15% Similarity=0.222 Sum_probs=63.2
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce----------------------EEcCC-CCCh
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR----------------------IYGLG-TGPK 141 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~----------------------I~g~d-~kpk 141 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +|+..- +. |++.- +..|
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 468899999999 89999999999999999999999 999621 12 22221 1234
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCce
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
-.+++.+... ...+.|+||..||.-|= +. |.+-
T Consensus 592 ~~iV~~lq~~----G~vVam~GDGvNDapAL-k~---AdVG 624 (867)
T TIGR01524 592 SRIIGLLKKA----GHTVGFLGDGINDAPAL-RK---ADVG 624 (867)
T ss_pred HHHHHHHHhC----CCEEEEECCCcccHHHH-Hh---CCEE
Confidence 4455555543 23457999999999999 88 8864
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.054 Score=54.75 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=73.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce----------------------EEcCC-CCCh
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR----------------------IYGLG-TGPK 141 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~----------------------I~g~d-~kpk 141 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +|+..- +. |++.- +..|
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~-~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPG-EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCC-CccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 478899999999 89999999999999999999999 999521 11 22221 1133
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHH
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFS 214 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~ 214 (218)
-.+++.+... + .-+.|+||..||.-|= +. |.+- |++ |.++ +.....+| .++ +++..+.
T Consensus 627 ~~iV~~Lq~~-G---~vVamtGDGvNDaPAL-k~---ADVG-IAm--g~gt--dvAkeaAD--iVLldd~f~~Iv 686 (903)
T PRK15122 627 SRVLKALQAN-G---HTVGFLGDGINDAPAL-RD---ADVG-ISV--DSGA--DIAKESAD--IILLEKSLMVLE 686 (903)
T ss_pred HHHHHHHHhC-C---CEEEEECCCchhHHHH-Hh---CCEE-EEe--Cccc--HHHHHhcC--EEEecCChHHHH
Confidence 4455666543 2 3457999999999998 88 8764 334 4233 33333456 665 3444443
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.045 Score=55.29 Aligned_cols=103 Identities=15% Similarity=0.119 Sum_probs=70.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce----------------------EEcCC-CCCh
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR----------------------IYGLG-TGPK 141 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~----------------------I~g~d-~kpk 141 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +||..- .. |++.- +..|
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~-~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAG-EVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCcc-CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 467899999999 89999999999999999999999 999521 11 22221 1133
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL 207 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~ 207 (218)
-.+++.+... + .-+.|+||..||.-|= +. |.+ |+.-|.++ +.....+| .++
T Consensus 627 ~~IV~~Lq~~-G---~vVam~GDGvNDaPAL-k~---ADV---GIAmg~gt--dvAkeaAD--iVL 677 (902)
T PRK10517 627 ERIVTLLKRE-G---HVVGFMGDGINDAPAL-RA---ADI---GISVDGAV--DIAREAAD--IIL 677 (902)
T ss_pred HHHHHHHHHC-C---CEEEEECCCcchHHHH-Hh---CCE---EEEeCCcC--HHHHHhCC--EEE
Confidence 4455655543 2 2357999999999998 88 775 33334333 33333556 665
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.061 Score=46.64 Aligned_cols=87 Identities=15% Similarity=0.198 Sum_probs=54.1
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCC---hHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~---~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
...++||+.++|+ ++|++++++||++ +.....-|++ +|+....+-|+++. ......+.+.......++
T Consensus 16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~ts~-----~~~~~~l~~~~~~~~~v~ 89 (279)
T TIGR01452 16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFSSA-----LCAARLLRQPPDAPKAVY 89 (279)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEecHH-----HHHHHHHHhhCcCCCEEE
Confidence 3468999999998 7899999999955 4444456787 89865555554432 333333333211234578
Q ss_pred EEcCChhhHHHhhccCccCCceEE
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
+||+.. -.+.. +. +|+..+
T Consensus 90 ~iG~~~-~~~~l-~~---~g~~~~ 108 (279)
T TIGR01452 90 VIGEEG-LRAEL-DA---AGIRLA 108 (279)
T ss_pred EEcCHH-HHHHH-HH---CCCEEe
Confidence 899852 22333 55 676644
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.0096 Score=48.75 Aligned_cols=41 Identities=15% Similarity=0.014 Sum_probs=36.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
+|+..++.++++.+.+..++++|||+.+|+.++ +. +|+.++
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~-~~---~~~~va 203 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMF-EV---AGLAVA 203 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH-HH---cCCceE
Confidence 899999999999888889999999999999999 88 887543
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.062 Score=53.26 Aligned_cols=86 Identities=15% Similarity=0.147 Sum_probs=63.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC---ce-----------------------EEcCC-
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP---DR-----------------------IYGLG- 137 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F---d~-----------------------I~g~d- 137 (218)
.++-|++.++++ +.|+++.++|+-+...+..+-++ +|+.... +. +++.-
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~ 519 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVF 519 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecC
Confidence 478899999999 89999999999999999999999 9996420 00 22222
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCce
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
+..|-.+++.+..+- .-+.|+||..||.-|= +. |.+-
T Consensus 520 Pe~K~~iV~~lq~~G----~~VamvGDGvNDapAL-~~---AdVG 556 (755)
T TIGR01647 520 PEHKYEIVEILQKRG----HLVGMTGDGVNDAPAL-KK---ADVG 556 (755)
T ss_pred HHHHHHHHHHHHhcC----CEEEEEcCCcccHHHH-Hh---CCee
Confidence 123444556665432 3457999999999988 88 8764
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.12 Score=41.34 Aligned_cols=89 Identities=18% Similarity=0.247 Sum_probs=57.9
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHH---HHHHHhc---CCCCCCceEEcCC---C--------C--C---hHH
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFAD---ALLRELA---GVTIPPDRIYGLG---T--------G--P---KVE 143 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~---~iL~~~~---gl~~~Fd~I~g~d---~--------k--p---kPe 143 (218)
...||+.++++ ++|++++++|+++...+. ..|+. + |..-....++++. . . | |.+
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~-~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ-IKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH-hhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 46799999999 899999999999987764 55554 3 3322223454433 1 1 2 344
Q ss_pred HHHHHHhcCCCCCCcEE-EEcCChhhHHHhhccCccCCce
Q 027821 144 VLKQLQKKPELQGMTLH-FVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l-~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
.+..+...+.-.....+ -+||+.+|+++= ++ +|++
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y-~~---~gi~ 141 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISY-SA---VGIP 141 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHH-HH---cCCC
Confidence 55666654431222333 388999999998 88 7874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.083 Score=53.99 Aligned_cols=39 Identities=23% Similarity=0.353 Sum_probs=36.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
.+|-|++.++++ ++|+++.++|+.+...+..+.++ +|+-
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~ 608 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGII 608 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 367899999999 89999999999999999999999 9994
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.0037 Score=49.39 Aligned_cols=82 Identities=15% Similarity=0.083 Sum_probs=56.5
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCC-CCCCceEEcCCC-C--ChHHHHHHHHhcCCCCCCcEEE
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV-TIPPDRIYGLGT-G--PKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl-~~~Fd~I~g~d~-k--pkPe~l~~l~~~~~~~~~e~l~ 161 (218)
..+-||+.++|+ ...+.++|.|+..+.+++.+++. ++- ..+|+.+++.+. . .+.. .+. +...+.+..++++
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~-~Kd-L~~l~~~~~~vvi 111 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSY-IKD-LSKLGRDLDNVVI 111 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEE-E---GGGSSS-GGGEEE
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhcccccccccccccccccccc-ccc-hHHHhhccccEEE
Confidence 457899999999 78899999999999999999999 887 578998887651 1 1111 122 2233335788999
Q ss_pred EcCChhhHHHh
Q 027821 162 VEDRLATLKNV 172 (218)
Q Consensus 162 IGDs~~Di~aA 172 (218)
|+|++.-...-
T Consensus 112 vDD~~~~~~~~ 122 (159)
T PF03031_consen 112 VDDSPRKWALQ 122 (159)
T ss_dssp EES-GGGGTTS
T ss_pred EeCCHHHeecc
Confidence 99999866544
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.021 Score=48.77 Aligned_cols=59 Identities=12% Similarity=0.034 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
.|...++.+++.++++.++++.|||+.||+.+- +. +|+ .+++ |-..+ +++. .++ ++..+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml-~~---ag~-~vAm--~NA~~-~vK~-~A~--~vt~~ 254 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMI-EY---AGV-GVAM--GNAIP-SVKE-VAQ--FVTKS 254 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHH-Hh---CCc-eEEe--cCccH-HHHH-hcC--eeccC
Confidence 888999999999999999999999999999999 98 997 3334 44444 4444 235 66654
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.086 Score=44.91 Aligned_cols=63 Identities=8% Similarity=-0.049 Sum_probs=43.9
Q ss_pred ChHHHHHHHHhcCCCC--CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhc--cCCCCeEEcC
Q 027821 140 PKVEVLKQLQKKPELQ--GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA--ASIPRIQLLQ 209 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~--~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a--~~~p~~~~~~ 209 (218)
.|...++.+++.++++ ..++++|||+.+|+.+. +. +|..+ ++..+....+++++. .++ ++..+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml-~~---ag~~v-am~Na~~~~~~lk~~~~a~~--~vt~~ 242 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLL-EV---VDLAV-VVPGPNGPNVSLKPGDPGSF--LLTPA 242 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHH-HH---CCEEE-EeCCCCCCccccCccCCCcE--EEcCC
Confidence 7777888888888777 88999999999999999 88 88644 443332212345443 123 66655
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.028 Score=47.98 Aligned_cols=61 Identities=13% Similarity=0.060 Sum_probs=45.8
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
.|...++.+++.++++.++++.|||+.||+.+- +. +|.. +++ |-.+++..+.|.++ +++.+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml-~~---ag~~-vAm--~NA~~~vK~~A~~~--~v~~~ 250 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEML-SM---AGKG-CIM--GNAHQRLKDLLPEL--EVIGS 250 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHH-HH---cCCC-eee--cCCcHHHHHhCCCC--eeccc
Confidence 788999999999999999999999999999999 98 9973 444 43444444444333 45544
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.099 Score=45.64 Aligned_cols=52 Identities=35% Similarity=0.522 Sum_probs=37.8
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHH---HHHHHhcCCCCCCceEEcCC
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFAD---ALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~---~iL~~~~gl~~~Fd~I~g~d 137 (218)
....++||+.++|+ ++|+++.++||++...-+ .-|+.+.+++...+.|+++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 34689999999999 899999999998765433 33333145556677777664
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.2 Score=48.27 Aligned_cols=59 Identities=8% Similarity=0.000 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
.|...++.+++.++++.++++.|||+.||+.+- +. ||+. |++ |..+++. ++ .++ ++..+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeML-e~---AG~g-VAM--gNA~eeV-K~-~Ad--~VT~s 565 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEML-QL---ASLG-VAL--SNGAEKT-KA-VAD--VIGVS 565 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHH-HH---CCCE-EEe--CCCCHHH-HH-hCC--EEeCC
Confidence 888999999999999999999999999999999 98 9963 334 5455444 33 346 77654
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.13 Score=44.05 Aligned_cols=53 Identities=17% Similarity=0.090 Sum_probs=42.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhc
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA 199 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a 199 (218)
.|-..++.+++.++++.++++.|||+.||+.+= +. +|. .+++ |-..++..+.|
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml-~~---ag~-~vAm--~Na~~~vK~~A 240 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREML-GS---VGR-GFIM--GNAMPQLRAEL 240 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHH-HH---cCC-ceec--cCChHHHHHhC
Confidence 788899999999999999999999999999999 88 885 4444 43444444333
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.24 Score=50.96 Aligned_cols=39 Identities=15% Similarity=0.336 Sum_probs=35.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
.+|-|||+++++ ++|+++.++|+-..+.+..+-+. +|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 478999999999 89999999999999999999888 8873
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.28 Score=46.04 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=61.6
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+.|++.++++ +.|+++.++|+.....+..+-++ +|+ ++.- ...|-+.+..+...- ..+.|||
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~~~g----~~v~~vG 413 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQKKG----RVVAMTG 413 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHHHCC----CEEEEEC
Confidence 478999999999 88999999999999999999999 987 2221 224556666665432 3468999
Q ss_pred CChhhHHHhhccCccCCce
Q 027821 164 DRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~ 182 (218)
|..+|.-+- +. |++-
T Consensus 414 Dg~nD~~al-~~---Advg 428 (499)
T TIGR01494 414 DGVNDAPAL-KK---ADVG 428 (499)
T ss_pred CChhhHHHH-Hh---CCCc
Confidence 999999988 77 7743
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.046 Score=46.46 Aligned_cols=80 Identities=18% Similarity=0.254 Sum_probs=57.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCCh---HHHHHHHHHhcCCCCCCceEEcCC-C-CC------hHHHHHHHHhc-C
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGLG-T-GP------KVEVLKQLQKK-P 152 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~---~~~~~iL~~~~gl~~~Fd~I~g~d-~-kp------kPe~l~~l~~~-~ 152 (218)
..+.||+.++++ ++|++++++||++. +.+..-|++ .|+..+-..+.-.+ . .+ |.+-...+.++ +
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy 192 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGY 192 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhccccccccccccccccchHHHHHHHHcCC
Confidence 478999999999 99999999998665 467777888 89775544443332 1 22 44455566655 3
Q ss_pred CCCCCcEEEEcCChhhHHHh
Q 027821 153 ELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA 172 (218)
.+ +.+|||...|+..+
T Consensus 193 ~I----i~~iGD~~~D~~~~ 208 (229)
T PF03767_consen 193 RI----IANIGDQLSDFSGA 208 (229)
T ss_dssp EE----EEEEESSGGGCHCT
T ss_pred cE----EEEeCCCHHHhhcc
Confidence 32 37999999999995
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.36 Score=48.97 Aligned_cols=90 Identities=16% Similarity=0.269 Sum_probs=65.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc--eEE-cCC--CCCh-----------------H
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIY-GLG--TGPK-----------------V 142 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd--~I~-g~d--~kpk-----------------P 142 (218)
.+|-++++++++ ++|+++-++|+-+...+..+=++ +|+..--+ .++ |.+ ...+ |
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 578999999999 99999999999999999999999 99865432 243 433 1122 1
Q ss_pred ----HHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 143 ----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 143 ----e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
.+++.+.+. + .-+.|+||..||+-|= |. |.+-+..+
T Consensus 625 ~qK~~IV~~lq~~-g---~vVamtGDGvNDapAL-k~---ADVGIamg 664 (917)
T COG0474 625 EQKARIVEALQKS-G---HVVAMTGDGVNDAPAL-KA---ADVGIAMG 664 (917)
T ss_pred HHHHHHHHHHHhC-C---CEEEEeCCCchhHHHH-Hh---cCccEEec
Confidence 123334433 3 3457999999999999 98 88755433
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.71 Score=39.83 Aligned_cols=96 Identities=20% Similarity=0.276 Sum_probs=68.0
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHH---HHHHhcCCCCCCce-----EE------cC-C------------CC-
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADA---LLRELAGVTIPPDR-----IY------GL-G------------TG- 139 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~---iL~~~~gl~~~Fd~-----I~------g~-d------------~k- 139 (218)
=+.++++++ ++|+++..+|..+...... -|++ +|++.-=.. ++ .. . .+
T Consensus 83 e~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~ 161 (252)
T PF11019_consen 83 ESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQ 161 (252)
T ss_pred chhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCCC
Confidence 356777777 8999999999988765444 4555 666411110 00 00 0 12
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHH---hhccCccCCceEEEEecCC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKN---VIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~a---A~k~~~~AGv~~i~V~~G~ 190 (218)
+|.+++..++...+..+..++||+|+...+++ |.++ .|+.++|.-|..
T Consensus 162 ~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~---~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 162 DKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKK---SGIDFIGFHYTG 212 (252)
T ss_pred ccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhh---CCCcEEEEEEcc
Confidence 77888999998888888899999999988753 2267 899999998875
|
The function is not known. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.11 Score=43.84 Aligned_cols=41 Identities=12% Similarity=0.024 Sum_probs=33.1
Q ss_pred ChHHHHHHHHhcCCC--CCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 140 PKVEVLKQLQKKPEL--QGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 140 pkPe~l~~l~~~~~~--~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
.|+..++.+++..++ +..++++|||+.+|+.+- +. +|+.++
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml-~~---ag~~v~ 223 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMF-EV---VDLAFL 223 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHH-Hh---CCCcEe
Confidence 778888777766644 566899999999999999 98 887543
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.45 Score=41.00 Aligned_cols=81 Identities=14% Similarity=0.220 Sum_probs=58.3
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHH----HHHHHHHhcCCCCCCc-eE-EcCCCCChHHHHHHHHhcCCCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRF----ADALLRELAGVTIPPD-RI-YGLGTGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~----~~~iL~~~~gl~~~Fd-~I-~g~d~kpkPe~l~~l~~~~~~~~~ 157 (218)
..++.||+.|+|+ .+|.++.-+||+.++. +..-|++ .||..--+ .+ +=.+.++|..-...+.+.+.
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~---- 194 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDYK---- 194 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhccc----
Confidence 4689999999999 8999999999998865 6667777 78864332 22 22234466655555555443
Q ss_pred cEEEEcCChhhHHHh
Q 027821 158 TLHFVEDRLATLKNV 172 (218)
Q Consensus 158 e~l~IGDs~~Di~aA 172 (218)
-+++|||...|....
T Consensus 195 iVm~vGDNl~DF~d~ 209 (274)
T COG2503 195 IVMLVGDNLDDFGDN 209 (274)
T ss_pred eeeEecCchhhhcch
Confidence 348999999998765
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.18 Score=41.44 Aligned_cols=62 Identities=16% Similarity=0.091 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.|-..++.+++.++++..+++.|||+.+|+.+- +. +|.. +++ |..++ +++. .++ ++..+-.+
T Consensus 186 sK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml-~~---~~~~-~am--~na~~-~~k~-~a~--~i~~~~~~ 247 (254)
T PF08282_consen 186 SKGSAIKYLLEYLGISPEDIIAFGDSENDIEML-EL---AGYS-VAM--GNATP-ELKK-AAD--YITPSNND 247 (254)
T ss_dssp SHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHH-HH---SSEE-EEE--TTS-H-HHHH-HSS--EEESSGTC
T ss_pred CHHHHHHHHhhhcccccceeEEeecccccHhHH-hh---cCeE-EEE--cCCCH-HHHH-hCC--EEecCCCC
Confidence 788899999999998889999999999999999 88 8754 445 44444 4433 335 66665544
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.61 Score=39.85 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=70.4
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcC-------CCCCCceEEcCCCCChHHHHHHHHhcCCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAG-------VTIPPDRIYGLGTGPKVEVLKQLQKKPELQG 156 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~g-------l~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~ 156 (218)
....|+.|..+++ ..|++++|-|+.+....+.+..+ .+ ++.|||.-+|. |.-...+.++....+.++
T Consensus 121 k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~-s~~gdl~~y~~gyfDt~iG~--K~e~~sy~~I~~~Ig~s~ 197 (254)
T KOG2630|consen 121 KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGY-SDAGDLRKYISGYFDTTIGL--KVESQSYKKIGHLIGKSP 197 (254)
T ss_pred cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcc-cCcchHHHHhhhhhhccccc--eehhHHHHHHHHHhCCCh
Confidence 3478999999999 89999999999887655554443 32 23555543332 233457777777777777
Q ss_pred CcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 157 MTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.|++|.=|-+.-..|| +. +|+.+..+.
T Consensus 198 ~eiLfLTd~~~Ea~aa-~~---aGl~a~l~~ 224 (254)
T KOG2630|consen 198 REILFLTDVPREAAAA-RK---AGLQAGLVS 224 (254)
T ss_pred hheEEeccChHHHHHH-Hh---cccceeeee
Confidence 8999999999999999 88 999888773
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.12 Score=44.47 Aligned_cols=66 Identities=6% Similarity=-0.171 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhcCCC---CCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 140 PKVEVLKQLQKKPEL---QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 140 pkPe~l~~l~~~~~~---~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
.|-..++.+++.+++ +.++++.|||+.||+.+= +. +|. .+++.-+-.+.+.++.....++++...+
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml-~~---ag~-gvAM~~~~~~~~~l~~~~~~~~~~~~~~ 255 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLL-DV---MDY-AVVVKGLNREGVHLQDDDPARVYRTQRE 255 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHH-Hh---CCE-EEEecCCCCCCcccccccCCceEeccCC
Confidence 788889999998888 889999999999999999 98 885 3444222212123433333344665544
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.25 Score=42.79 Aligned_cols=65 Identities=20% Similarity=0.142 Sum_probs=48.5
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC---CceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD---GWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A---Gv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
.|-..++++++.+++...++++|||..+|+.+= +. + +-.+|+| |-.. -.+. +.+++++++..|
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf-~~---~~~~~g~~vav--g~a~------~~A~--~~l~~~~~v~~~ 239 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGF-AV---VNRLGGISVKV--GTGA------TQAS--WRLAGVPDVWSW 239 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHH-HH---HHhcCCeEEEE--CCCC------CcCe--EeCCCHHHHHHH
Confidence 677888999998887888999999999998886 54 4 3355556 4222 1234 789999999988
Q ss_pred cC
Q 027821 217 LK 218 (218)
Q Consensus 217 ~~ 218 (218)
|+
T Consensus 240 L~ 241 (266)
T PRK10187 240 LE 241 (266)
T ss_pred HH
Confidence 74
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.24 Score=42.60 Aligned_cols=43 Identities=23% Similarity=0.141 Sum_probs=37.5
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR 132 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~ 132 (218)
...+++.++|+ ++|++++|||+++...+..++++ +|+..+|-.
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~i~ 66 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPFIV 66 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCEEE
Confidence 46778888888 89999999999999999999999 999876543
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=92.21 E-value=1.1 Score=39.17 Aligned_cols=82 Identities=15% Similarity=0.117 Sum_probs=53.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---HHHHHHHHHhcCCCCCCceEEcC--C-CC-----ChHHHHHHHHhcC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGL--G-TG-----PKVEVLKQLQKKP 152 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---~~~~~iL~~~~gl~~~Fd~I~g~--d-~k-----pkPe~l~~l~~~~ 152 (218)
..++.||+.++++ ++|++++++||+.+ +.+..-|++ .|+..+=..+.-. + ++ -|.+.-+++.. .
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~-e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQ-E 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCcceeeecCCCCCccchhHHHHHHHHHHHHH-c
Confidence 4678999999999 89999999999986 346667777 7887552333322 1 11 12222233332 2
Q ss_pred CCCCCcEEEEcCChhhHHHh
Q 027821 153 ELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA 172 (218)
+..-. ..|||..+|+...
T Consensus 221 GYrIv--~~iGDq~sDl~G~ 238 (275)
T TIGR01680 221 GYNIV--GIIGDQWNDLKGE 238 (275)
T ss_pred CceEE--EEECCCHHhccCC
Confidence 22222 6899999999655
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.15 Score=43.83 Aligned_cols=46 Identities=26% Similarity=0.310 Sum_probs=36.9
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChH---HHHHHHHHhcCCCCCCceEEcC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSR---FADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~---~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
++||+.++|+ ++|++++++||++.. .....|+. +|+.--.+.|+++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEcH
Confidence 8999999999 789999999986665 46677787 8987555666654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.82 Score=47.15 Aligned_cols=39 Identities=28% Similarity=0.366 Sum_probs=36.4
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 478899999999 89999999999999999999999 9994
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=91.15 E-value=0.84 Score=47.61 Aligned_cols=38 Identities=16% Similarity=0.397 Sum_probs=30.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGV 126 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl 126 (218)
.++-+|+.++++ ++|+++.++|+-..+.+..+=.. +||
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s-~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS-SKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-hCC
Confidence 478999999999 88999999999888777766544 444
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=90.79 E-value=2.1 Score=36.94 Aligned_cols=83 Identities=20% Similarity=0.277 Sum_probs=51.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC------------CCC------hHH-HH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG------------TGP------KVE-VL 145 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d------------~kp------kPe-~l 145 (218)
..+-+|+.++++ ++++++.|.|..-.+.++.+|++ .|....=-.|++.- ..| |-+ .+
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q-~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ-AGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH-TT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH-cCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 568899999999 89999999999999999999999 75432111244432 111 222 12
Q ss_pred --HHHHhcCCCCCCcEEEEcCChhhHHHh
Q 027821 146 --KQLQKKPELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 146 --~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
...-...+ ...+++..|||..|+.+|
T Consensus 168 ~~~~~~~~~~-~R~NvlLlGDslgD~~Ma 195 (246)
T PF05822_consen 168 EDSPYFKQLK-KRTNVLLLGDSLGDLHMA 195 (246)
T ss_dssp TTHHHHHCTT-T--EEEEEESSSGGGGTT
T ss_pred cCchHHHHhc-cCCcEEEecCccCChHhh
Confidence 11223444 567899999999999999
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.98 Score=41.73 Aligned_cols=51 Identities=12% Similarity=-0.107 Sum_probs=41.2
Q ss_pred ChHHHHHHHHhcC---CCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHH
Q 027821 140 PKVEVLKQLQKKP---ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKER 196 (218)
Q Consensus 140 pkPe~l~~l~~~~---~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l 196 (218)
.|-..++.+++.+ +++..+++.+||+.||+++= +. +|+..|++ |-.+++..
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl-~~---ag~~gvam--~NA~~elk 228 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELF-SV---PDVYGVMV--SNAQEELL 228 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHH-hc---CCCCEEEE--cCCcHHHH
Confidence 7888899998888 78889999999999999999 88 88767777 43444333
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=90.49 E-value=1.5 Score=37.64 Aligned_cols=38 Identities=13% Similarity=0.273 Sum_probs=33.2
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCC
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV 126 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl 126 (218)
.++-||+.++++ +.-..=+|+|++-+.+++.+-++ .|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~-ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASM-IGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHh-cCC
Confidence 578999999999 77778899999999999999888 887
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=90.26 E-value=0.68 Score=39.59 Aligned_cols=70 Identities=20% Similarity=0.188 Sum_probs=46.6
Q ss_pred HHHHHHHHhcCCCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 115 FADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 115 ~~~~iL~~~~gl~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
.++..|+. .|+. .+.+++.. .-.|-..++.++.+.+++..++++.|||-+|+.+= . .+...|.|
T Consensus 135 ~i~~~l~~-~~l~--~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~----~~~~~vvV 206 (247)
T PF05116_consen 135 EIRARLRQ-RGLR--VNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-E----GGDHGVVV 206 (247)
T ss_dssp HHHHHHHC-CTCE--EEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-C----CSSEEEE-
T ss_pred HHHHHHHH-cCCC--eeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-c----CcCCEEEE
Confidence 35555555 5654 34445443 22678899999999998889999999999999988 6 46677766
Q ss_pred ecCCCCHH
Q 027821 187 DWGYNTQK 194 (218)
Q Consensus 187 ~~G~~~~~ 194 (218)
|..+++
T Consensus 207 --~Na~~e 212 (247)
T PF05116_consen 207 --GNAQPE 212 (247)
T ss_dssp --TTS-HH
T ss_pred --cCCCHH
Confidence 445555
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.22 E-value=1.1 Score=42.61 Aligned_cols=101 Identities=19% Similarity=0.160 Sum_probs=69.4
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHH----HHHHHHhcCCCCCCcEEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVE----VLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe----~l~~l~~~~~~~~~e~l~ 161 (218)
...||+.|-+. +.|++...+|+.++-.+..+-++ .|+++|.. ..+|+ .+++-..+-+ =+-|
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiA-------eatPEdK~~~I~~eQ~~gr----lVAM 514 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIA-------EATPEDKLALIRQEQAEGR----LVAM 514 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhh-------cCChHHHHHHHHHHHhcCc----EEEE
Confidence 46799999988 89999999999999999999999 99987654 24443 4444443322 2359
Q ss_pred EcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh-----ccCCCCeEEc
Q 027821 162 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE-----AASIPRIQLL 208 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~-----a~~~p~~~~~ 208 (218)
.||..||.-|- .. |.+- ++.+.|. ....+. .++||+-+++
T Consensus 515 tGDGTNDAPAL-Aq---AdVg-~AMNsGT--qAAkEAaNMVDLDS~PTKlie 559 (681)
T COG2216 515 TGDGTNDAPAL-AQ---ADVG-VAMNSGT--QAAKEAANMVDLDSNPTKLIE 559 (681)
T ss_pred cCCCCCcchhh-hh---cchh-hhhcccc--HHHHHhhcccccCCCccceeh
Confidence 99999999887 44 5542 2335554 333332 3556666544
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=90.06 E-value=1.3 Score=36.89 Aligned_cols=91 Identities=13% Similarity=0.121 Sum_probs=59.7
Q ss_pred CCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCC--Cc--eEEcCC---------CCCh-HHHHHHHHhcC
Q 027821 89 RFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIP--PD--RIYGLG---------TGPK-VEVLKQLQKKP 152 (218)
Q Consensus 89 ~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~--Fd--~I~g~d---------~kpk-Pe~l~~l~~~~ 152 (218)
..-||+.++|+ ...+.++|-|+.....++.+++. +|+... +. .+...+ .++. -..+..+-.++
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l 123 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALL 123 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhc
Confidence 35699999999 78999999999999999999999 886432 11 122111 1111 11133332232
Q ss_pred C--CCCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 153 E--LQGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 153 ~--~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
+ .+..++++|+|++.-...- =. +|+.+-
T Consensus 124 ~~~~~~~ntiiVDd~p~~~~~~-P~---N~i~I~ 153 (195)
T TIGR02245 124 PEFYSMKNTIMFDDLRRNFLMN-PQ---NGLKIR 153 (195)
T ss_pred ccCCCcccEEEEeCCHHHHhcC-CC---CccccC
Confidence 2 1557899999999987765 44 566554
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=89.79 E-value=0.64 Score=40.38 Aligned_cols=80 Identities=23% Similarity=0.275 Sum_probs=53.5
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A 179 (218)
..-+++++||.++...-+.+++.+..+.-.+|-.+....-+|..+++.+. ++ +|++|....++.| . .
T Consensus 184 ~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLgG~~K~~vL~~~~--ph------IFFDDQ~~H~~~a-~----~ 250 (264)
T PF06189_consen 184 NSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLGGLPKGPVLKAFR--PH------IFFDDQDGHLESA-S----K 250 (264)
T ss_pred CCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhCCCchhHHHHhhC--CC------EeecCchhhhhHh-h----c
Confidence 45689999997665443444443233333456444333337777766553 22 7999999999999 7 5
Q ss_pred CceEEEEecCCCC
Q 027821 180 GWNLYLGDWGYNT 192 (218)
Q Consensus 180 Gv~~i~V~~G~~~ 192 (218)
++++.-|.||..+
T Consensus 251 ~vps~hVP~gv~n 263 (264)
T PF06189_consen 251 VVPSGHVPYGVAN 263 (264)
T ss_pred CCCEEeccCCcCC
Confidence 8999999999654
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.67 E-value=1.7 Score=43.61 Aligned_cols=99 Identities=19% Similarity=0.258 Sum_probs=69.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce----EEcC-C----------------------
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR----IYGL-G---------------------- 137 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~----I~g~-d---------------------- 137 (218)
.+|-|+|.+.++ +.|+++-++|+-..+.+.++-++ .|+-..-+. .+++ +
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 478899999999 99999999999999999999999 998654442 2222 1
Q ss_pred -CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 138 -TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 138 -~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
...|-++++.+.+.-++ +-|-||..||.-|= |. |.+ |+.-|-.-.+.-++
T Consensus 662 ~P~HK~kIVeaLq~~gei----vAMTGDGVNDApAL-K~---AdI---GIAMG~~GTdVaKe 712 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEV----VAMTGDGVNDAPAL-KK---ADI---GIAMGISGTDVAKE 712 (972)
T ss_pred CchhHHHHHHHHHhcCCE----EEecCCCccchhhh-hh---ccc---ceeecCCccHhhHh
Confidence 11233455555554433 35999999999998 88 765 55566333344343
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.12 E-value=0.58 Score=40.11 Aligned_cols=48 Identities=25% Similarity=0.355 Sum_probs=36.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHH---HHHhcCCCCCCceEEcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADAL---LRELAGVTIPPDRIYGL 136 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~i---L~~~~gl~~~Fd~I~g~ 136 (218)
..++||+.++|+ ++|.+++++||+.......+ |+. +|+.--.+.|+++
T Consensus 16 ~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~-~G~~~~~~~i~ts 69 (248)
T PRK10444 16 NVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT-AGVDVPDSVFYTS 69 (248)
T ss_pred CeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCHhhEecH
Confidence 378999999998 88999999999887554444 455 6776555666655
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=87.54 E-value=1.1 Score=37.72 Aligned_cols=40 Identities=23% Similarity=0.104 Sum_probs=34.7
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP 129 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~ 129 (218)
...++..++|+ ++|++++++|+++...+..++++ +|+..+
T Consensus 15 ~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~~ 57 (225)
T TIGR02461 15 YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEPP 57 (225)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCc
Confidence 45677888888 78999999999999999999999 998653
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=87.47 E-value=3.1 Score=36.06 Aligned_cols=81 Identities=11% Similarity=0.046 Sum_probs=60.7
Q ss_pred CcEEEEc-CCChHHHHHHHHHhcCCCCCC--ceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC
Q 027821 103 SRIYIVT-TKQSRFADALLRELAGVTIPP--DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 103 ~~laIvT-nk~~~~~~~iL~~~~gl~~~F--d~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A 179 (218)
.--++|| +.--..+-.+|= +||+.+| +-||++..-.|...++++..+++.+...-++|||..---+|| +. -
T Consensus 176 ~vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aA-k~---l 249 (274)
T TIGR01658 176 CINVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAA-QA---M 249 (274)
T ss_pred eeEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHH-Hh---c
Confidence 3344555 444455555554 5887776 457877655889999999999985467889999999999999 98 9
Q ss_pred CceEEEEecC
Q 027821 180 GWNLYLGDWG 189 (218)
Q Consensus 180 Gv~~i~V~~G 189 (218)
+++++-+...
T Consensus 250 ~wPFw~I~~h 259 (274)
T TIGR01658 250 NWPFVKIDLH 259 (274)
T ss_pred CCCeEEeecC
Confidence 9999988643
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.20 E-value=1.3 Score=40.67 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=60.2
Q ss_pred HHHHHhCCCcEEEEcCCChHHHHHHHHHhcC--CCCCCceEEcCCCC-------------------ChH-----------
Q 027821 95 PDALKFASSRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGLGTG-------------------PKV----------- 142 (218)
Q Consensus 95 ~e~L~~~g~~laIvTnk~~~~~~~iL~~~~g--l~~~Fd~I~g~d~k-------------------pkP----------- 142 (218)
...+++.|.++.++||+.-.++..++++++| +..|||.|+....| +++
T Consensus 207 l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~ 286 (424)
T KOG2469|consen 207 LSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGG 286 (424)
T ss_pred hHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcc
Confidence 3333389999999999999999999988565 56889987543211 111
Q ss_pred ----HHHHHHHhcCCCCCCcEEEEcCChhh-HHHhhccCccCCceEEEEe
Q 027821 143 ----EVLKQLQKKPELQGMTLHFVEDRLAT-LKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 143 ----e~l~~l~~~~~~~~~e~l~IGDs~~D-i~aA~k~~~~AGv~~i~V~ 187 (218)
.....++...+....+++||||...+ |----+. -|+.++.|-
T Consensus 287 ~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~---~~wrt~lv~ 333 (424)
T KOG2469|consen 287 VYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKR---RGWRTVLVA 333 (424)
T ss_pred cCCcchHHHHHHHhcccccceeecccceeeeEEeccee---cceEEEEEe
Confidence 22233444444344677999998764 4333266 899998884
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.12 E-value=0.52 Score=40.09 Aligned_cols=40 Identities=15% Similarity=0.123 Sum_probs=35.0
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceE
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~ 183 (218)
.|...++.+.+.++++..+++.|||+.+|+.+= +. +|..+
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml-~~---ag~gv 228 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEML-EV---AGLGV 228 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHH-Hh---cCeee
Confidence 777888999999998888999999999999999 87 88533
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=87.09 E-value=8 Score=36.74 Aligned_cols=109 Identities=12% Similarity=0.087 Sum_probs=66.5
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 58 WSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
.|.+.++++...+++...+... .+.|.+.+.++++|.. +|||.+++..++.+.++++|++ .|+|.+
T Consensus 88 ~G~~~~el~~~~r~~l~~f~~~---------~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTe 153 (497)
T PLN02177 88 AGLKIRDIELVSRSVLPKFYAE---------DVHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTE 153 (497)
T ss_pred cCCCHHHHHHHHHHHHHHHHHH---------hcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEecc
Confidence 3777777766655555555322 2566677777766644 9999999999999997636765 333332
Q ss_pred -------------CCCh----HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 138 -------------TGPK----VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 138 -------------~kpk----Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
.+++ .+-..++.+..+.+ ...+..|||.+|...- .. ++ ..+.|
T Consensus 154 Lev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~-~~~~aYgDS~sD~plL-~~---a~-e~y~V 213 (497)
T PLN02177 154 LEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDA-LPDLGLGDRETDHDFM-SI---CK-EGYMV 213 (497)
T ss_pred cEECcCCEEeeeecCCCCCccHHHHHHHHHHhCCC-CceEEEECCccHHHHH-Hh---CC-ccEEe
Confidence 1121 12233343333322 2238999999999988 65 55 23445
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=86.21 E-value=1.6 Score=38.46 Aligned_cols=47 Identities=17% Similarity=0.082 Sum_probs=42.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
+-|.|.+.|. +.|.-+++=|...++.+...|++ ++|..+||.|++..
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~-~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE-LKLEGYFDIIICGG 192 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH-hCCccccEEEEeCC
Confidence 4578888888 88999999999999999999999 99999999998765
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=85.85 E-value=1.4 Score=36.39 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=30.4
Q ss_pred ChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 93 GIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 93 Gv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
-..++|+ ++|+++++|||++...+..++++ +|+.
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 3567777 89999999999999999999999 9986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.86 E-value=3.1 Score=35.27 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=34.8
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEE
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY 134 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~ 134 (218)
+-+...++|+ ++|++++|||+++...+..++++ +++....+.++
T Consensus 21 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~~~~I 67 (270)
T PRK10513 21 ISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKE-LHMEQPGDYCI 67 (270)
T ss_pred cCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHH-hCCCCCCCeEE
Confidence 3455667777 89999999999999999999999 99875433333
|
|
| >KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] | Back alignment and domain information |
|---|
Probab=81.72 E-value=2.9 Score=40.77 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=55.9
Q ss_pred cCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCC-CCC-ceEEcCCCCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 87 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT-IPP-DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 87 ~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~-~~F-d~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
.+++-|++.++|+ ..=+.|.|+|...+.++..+++- ++-. .|| |.|++.+..|+-..+......+..+. -++.|
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~l-iDP~~~lF~dRIisrde~~~~kt~dL~~~~p~g~s-mvvII 276 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKL-IDPEGKYFGDRIISRDESPFFKTLDLVLLFPCGDS-MVVII 276 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHH-hCCCCccccceEEEecCCCcccccccccCCCCCCc-cEEEE
Confidence 3578899999999 88899999999999999999997 7664 567 57899874333333322222222122 24555
Q ss_pred cCChhhHHHh
Q 027821 163 EDRLATLKNV 172 (218)
Q Consensus 163 GDs~~Di~aA 172 (218)
+|+..=-..+
T Consensus 277 DDr~dVW~~~ 286 (635)
T KOG0323|consen 277 DDRSDVWPDH 286 (635)
T ss_pred eCccccccCC
Confidence 5554433444
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 218 | |||
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 2e-04 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 3e-04 |
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 2e-04
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
Query: 89 RFYPGIPDALKFASSRIY---IVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKV--- 142
+ YP IP L+ S+ + +V+ K + +L L ++ D I G T +
Sbjct: 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDIL-NLSGYFDLIVGGDTFGEKKPS 141
Query: 143 -----EVLKQLQKKPE 153
+ L+ L ++PE
Sbjct: 142 PTPVLKTLEILGEEPE 157
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 39.5 bits (93), Expect = 3e-04
Identities = 16/98 (16%), Positives = 27/98 (27%), Gaps = 12/98 (12%)
Query: 67 DLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIY---IVTTKQSRFADALLREL 123
D R E+ + +P L + I++TK + LR
Sbjct: 67 DQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNH 126
Query: 124 AGVTIPPDRIYGLGTGPK--------VEVLKQLQKKPE 153
D I G + + +L+ PE
Sbjct: 127 -MPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPE 163
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 218 | |||
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.93 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.91 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.91 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.91 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.89 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.89 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.88 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.88 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.87 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.86 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.86 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.86 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.85 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.85 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.85 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.85 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.85 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.85 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.84 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.84 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.84 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.83 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.83 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.82 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.82 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.82 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.82 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.81 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.81 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.81 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.81 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.81 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.81 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.81 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.8 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.8 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.8 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.8 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.8 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.8 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.8 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.79 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.79 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.79 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.78 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.78 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.78 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.78 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.77 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.77 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.77 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.76 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.75 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.75 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.75 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.74 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.74 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.74 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.73 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.73 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.72 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.72 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.69 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.68 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.68 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.65 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.64 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.64 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.64 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.64 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.63 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.62 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.61 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.61 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.61 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.6 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.59 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.59 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.59 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.59 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.57 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.56 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.55 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.23 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.48 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.46 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.45 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.45 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.44 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.43 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.43 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.42 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.42 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.42 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.41 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.4 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.4 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.4 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.39 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.39 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.38 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.37 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.36 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.36 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.36 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.35 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.35 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.33 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.31 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.29 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.15 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.11 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.06 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.03 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.02 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.81 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.75 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.75 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.7 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.65 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.63 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 98.62 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.54 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.54 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.5 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.47 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.44 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.43 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.39 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.32 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.31 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.17 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.06 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.88 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.88 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.87 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 97.84 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.76 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.72 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.7 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.65 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 97.63 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 97.54 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.49 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.48 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 97.35 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.27 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.13 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.89 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 96.87 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 96.85 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.79 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.64 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.49 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 94.2 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 93.92 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 93.78 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 93.19 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 91.92 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 90.59 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 90.21 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 89.46 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 88.28 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 85.84 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 83.59 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 83.11 |
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=180.83 Aligned_cols=166 Identities=17% Similarity=0.214 Sum_probs=133.5
Q ss_pred HHHHHhhhc-cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH--hCCCcEEEEcCCChHHHH
Q 027821 41 EGILENWSK-IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTTKQSRFAD 117 (218)
Q Consensus 41 ~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~ 117 (218)
.+.+..+.| ......... ++.+...+..+.++++|.+.. .....++||+.++|+ +.|++++|+||+++..++
T Consensus 40 ~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~ 114 (210)
T 2ah5_A 40 AKTIRGFMGPPLESSFATC-LSKDQISEAVQIYRSYYKAKG----IYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQ 114 (210)
T ss_dssp HHHHHHTSSSCHHHHHHTT-SCGGGHHHHHHHHHHHHHHTG----GGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHH
T ss_pred HHHHHHHcCccHHHHHHHH-cCHHHHHHHHHHHHHHHHHhc----cCCCCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHH
Confidence 344566667 222222222 343344566667777665432 344679999999999 339999999999999999
Q ss_pred HHHHHhcCCCCCCceEEcCC--CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHH
Q 027821 118 ALLRELAGVTIPPDRIYGLG--TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKE 195 (218)
Q Consensus 118 ~iL~~~~gl~~~Fd~I~g~d--~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~ 195 (218)
..|++ +|+..+|+.|++++ .||||++++.+++..++++++|+|||||.+|+++| ++ ||+++|+|.||++..++
T Consensus 115 ~~l~~-~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a-~~---aG~~~i~v~~~~~~~~~ 189 (210)
T 2ah5_A 115 DMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGA-RE---TGIQKLAITWGFGEQAD 189 (210)
T ss_dssp HHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHH-HH---HTCEEEEESSSSSCHHH
T ss_pred HHHHh-cCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHH-HH---CCCcEEEEcCCCCCHHH
Confidence 99999 99999999998876 57999999999999999999999999999999999 99 99999999999988777
Q ss_pred HHhccCCCCeEEcChhHHHhhcC
Q 027821 196 REEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 196 l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
+....++ ++++++.|+...++
T Consensus 190 l~~~~a~--~v~~~~~el~~~l~ 210 (210)
T 2ah5_A 190 LLNYQPD--YIAHKPLEVLAYFQ 210 (210)
T ss_dssp HHTTCCS--EEESSTTHHHHHTC
T ss_pred HHhCCCC--EEECCHHHHHHHhC
Confidence 7655555 99999999988764
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-24 Score=173.91 Aligned_cols=125 Identities=18% Similarity=0.123 Sum_probs=112.2
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
....+++||+.++|+ ++|++++|+||+++..+...+++ +|+..+||.+++++ .||+|++++.++++++++++
T Consensus 80 ~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~-~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~ 158 (216)
T 3kbb_A 80 SELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRR-LDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPE 158 (216)
T ss_dssp HHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGG
T ss_pred HHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHh-cCCCccccccccccccCCCcccHHHHHHHHHhhCCCcc
Confidence 445689999999999 89999999999999999999999 99999999998876 67999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEE-EEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLY-LGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i-~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+|+||||+.+|+++| ++ +||++| +|.||+++.+.+.+++++ . +.++.|+...|
T Consensus 159 e~l~VgDs~~Di~aA-~~---aG~~~i~~v~~g~~~~~~l~~~~~~--~-i~~~~eli~~l 212 (216)
T 3kbb_A 159 KVVVFEDSKSGVEAA-KS---AGIERIYGVVHSLNDGKALLEAGAV--A-LVKPEEILNVL 212 (216)
T ss_dssp GEEEEECSHHHHHHH-HH---TTCCCEEEECCSSSCCHHHHHTTCS--E-EECGGGHHHHH
T ss_pred ceEEEecCHHHHHHH-HH---cCCcEEEEecCCCCCHHHHHhCCCc--E-ECCHHHHHHHH
Confidence 999999999999999 99 999998 689999999998887655 5 44677777655
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-23 Score=169.94 Aligned_cols=165 Identities=16% Similarity=0.233 Sum_probs=139.8
Q ss_pred HHHHhhhc--cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHH
Q 027821 42 GILENWSK--IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFA 116 (218)
Q Consensus 42 ~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~ 116 (218)
+.+..+.| ....+...++++.+........+++.+.+.. .....++||+.++|+ ++|++++|+||+....+
T Consensus 41 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~ 116 (226)
T 3mc1_A 41 SSLNKFVGPPLKTSFMEYYNFDEETATVAIDYYRDYFKAKG----MFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFS 116 (226)
T ss_dssp GGGGGGSSSCHHHHHHHHHCCCHHHHHHHHHHHHHHHTTTG----GGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHH
T ss_pred HHHHHHhCcCHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhC----cccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 34455566 3444445557777777777777777774433 556789999999999 78999999999999999
Q ss_pred HHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC
Q 027821 117 DALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT 192 (218)
Q Consensus 117 ~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~ 192 (218)
+..+++ +|+..+|+.+++++ .||||+.++.+++.+++++.+|++|||+.+|+.+| ++ +|+.+|+|.||++.
T Consensus 117 ~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a-~~---aG~~~i~v~~g~~~ 191 (226)
T 3mc1_A 117 KQILEH-FKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGA-LK---NNLPSIGVTYGFGS 191 (226)
T ss_dssp HHHHHH-TTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHH-HT---TTCCEEEESSSSSC
T ss_pred HHHHHH-hCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHH-HH---CCCCEEEEccCCCC
Confidence 999999 99999999998876 57999999999999999999999999999999999 99 99999999999999
Q ss_pred HHHHHhccCCCCeEEcChhHHHhhc
Q 027821 193 QKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 193 ~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+.+....++ ++++++.||..++
T Consensus 192 ~~~~~~~~ad--~v~~s~~el~~~~ 214 (226)
T 3mc1_A 192 YEELKNAGAN--YIVNSVDELHKKI 214 (226)
T ss_dssp HHHHHHHTCS--EEESSHHHHHHHH
T ss_pred HHHHHHcCCC--EEECCHHHHHHHH
Confidence 8888666666 9999999999876
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=174.38 Aligned_cols=145 Identities=12% Similarity=0.175 Sum_probs=125.1
Q ss_pred CHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
+.+...+..+.++++|.+.. .....++||+.++|+ ++|++++|+||+++..++..|++ +|+. +|+.+++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~-~f~~~~~~~ 159 (240)
T 2hi0_A 86 TQTEVNRVLEVFKPYYADHC----QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEE-LFPG-SFDFALGEK 159 (240)
T ss_dssp CHHHHHHHHHHHHHHHHHTS----SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HSTT-TCSEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHhh----hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCc-ceeEEEecC
Confidence 44555666677777775443 445689999999999 78999999999999999999999 9999 999998875
Q ss_pred ----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHH
Q 027821 138 ----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 213 (218)
Q Consensus 138 ----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l 213 (218)
.||||+++..+++.+++++.+|+||||+.+|+++| ++ ||+.+|+|.||++..+++....++ +++.++.|+
T Consensus 160 ~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a-~~---aG~~~v~v~~~~~~~~~~~~~~a~--~~~~~~~el 233 (240)
T 2hi0_A 160 SGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTA-RN---SEMDEIAVNWGFRSVPFLQKHGAT--VIVDTAEKL 233 (240)
T ss_dssp TTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHH-HH---TTCEEEEESSSSSCHHHHHHTTCC--CEECSHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHH-HH---CCCeEEEECCCCCchhHHHhcCCC--EEECCHHHH
Confidence 57999999999999999999999999999999999 99 999999999999887777655555 999999999
Q ss_pred Hhhc
Q 027821 214 SRKL 217 (218)
Q Consensus 214 ~~~~ 217 (218)
..++
T Consensus 234 ~~~l 237 (240)
T 2hi0_A 234 EEAI 237 (240)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=165.83 Aligned_cols=165 Identities=13% Similarity=0.133 Sum_probs=135.2
Q ss_pred HHHHhhhc--cHHHHHHhcC--CCHHHHHHHHHHHHHHHHhccccccc--ccCCCCCChHHHHH---hCCCcEEEEcCCC
Q 027821 42 GILENWSK--IKPVIMEDWS--ENRDALVDLFGKVRDEWMDKDLTTWI--GANRFYPGIPDALK---FASSRIYIVTTKQ 112 (218)
Q Consensus 42 ~~~~~~~G--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~pGv~e~L~---~~g~~laIvTnk~ 112 (218)
+.+..+.| ....+....+ ...+........+.+.|.+.. . ....++||+.++|+ ++|++++|+||+.
T Consensus 55 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~ 130 (237)
T 4ex6_A 55 GAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFGAHV----RAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKV 130 (237)
T ss_dssp HHHHHHTTSCHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHH----HHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSC
T ss_pred HHHHHhcCccHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc----ccccCCccCCCHHHHHHHHHhCCCcEEEEcCCC
Confidence 34455556 2233332222 234455666666766665443 3 55689999999999 7899999999999
Q ss_pred hHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEec
Q 027821 113 SRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDW 188 (218)
Q Consensus 113 ~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~ 188 (218)
...++.++++ +|+..+|+.+++++ .||||++++.+++.+++++.+|+||||+.+|+.+| ++ +|+.+|+|.|
T Consensus 131 ~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a-~~---aG~~~i~v~~ 205 (237)
T 4ex6_A 131 EKAARAIAEL-TGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMG-RA---AGMTVIGVSY 205 (237)
T ss_dssp HHHHHHHHHH-HTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHH-HH---TTCEEEEESS
T ss_pred hHHHHHHHHH-cCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHH-HH---CCCeEEEEec
Confidence 9999999999 99999999999886 57999999999999999999999999999999999 99 9999999999
Q ss_pred CCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 189 GYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 189 G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|++..+.+....++ +++.++.||..++
T Consensus 206 g~~~~~~~~~~~ad--~v~~~~~el~~~l 232 (237)
T 4ex6_A 206 GVSGPDELMRAGAD--TVVDSFPAAVTAV 232 (237)
T ss_dssp SSSCHHHHHHTTCS--EEESSHHHHHHHH
T ss_pred CCCCHHHHHhcCCC--EEECCHHHHHHHH
Confidence 99888888776666 9999999999876
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=166.68 Aligned_cols=163 Identities=19% Similarity=0.224 Sum_probs=139.9
Q ss_pred HHhhhc--cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHH
Q 027821 44 LENWSK--IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADA 118 (218)
Q Consensus 44 ~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~ 118 (218)
+..+.| ....+...++++.+...+....+++.+.+.. .....++||+.++|+ ++|++++|+||.....++.
T Consensus 67 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~ 142 (240)
T 3sd7_A 67 LDQFIGPPLHDTFKEYYKFEDKKAKEAVEKYREYFADKG----IFENKIYENMKEILEMLYKNGKILLVATSKPTVFAET 142 (240)
T ss_dssp GGGGSSSCHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTG----GGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHH
T ss_pred HHHHhCccHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhc----ccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHH
Confidence 445555 3444555567777777777778888776544 556789999999999 7899999999999999999
Q ss_pred HHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCC-CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCH
Q 027821 119 LLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQ-GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ 193 (218)
Q Consensus 119 iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~-~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~ 193 (218)
.+++ +|+..+|+.+++++ .||||+.+..+++.++++ +.+|++|||+.+|+.+| ++ +|+.+++|.||+...
T Consensus 143 ~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a-~~---aG~~~i~v~~g~~~~ 217 (240)
T 3sd7_A 143 ILRY-FDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGA-KK---IGIDSIGVLYGYGSF 217 (240)
T ss_dssp HHHH-TTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHH-HH---HTCEEEEESSSSCCH
T ss_pred HHHH-cCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHH-HH---CCCCEEEEeCCCCCH
Confidence 9999 99999999998876 579999999999999999 99999999999999999 99 999999999999998
Q ss_pred HHHHhccCCCCeEEcChhHHHhhc
Q 027821 194 KEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 194 ~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+.+....++ +++.++.|+..++
T Consensus 218 ~~~~~~~ad--~v~~~~~el~~~l 239 (240)
T 3sd7_A 218 EEISESEPT--YIVENVESIKDIL 239 (240)
T ss_dssp HHHHHHCCS--EEESSSTTHHHHH
T ss_pred HHHhhcCCC--EEECCHHHHHHHh
Confidence 888666666 9999999999876
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=159.01 Aligned_cols=147 Identities=14% Similarity=-0.010 Sum_probs=128.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
.+.+.+......+.+.|.+. .....++||+.++|+ +.|++++|+||.....++..+++ +|+..+|+.++++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~ 140 (233)
T 3s6j_A 67 ITDEQAERLSEKHAQAYERL-----QHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKA-LKLDINKINIVTR 140 (233)
T ss_dssp CCHHHHHHHHHHHHHHHHHT-----GGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHT-TTCCTTSSCEECG
T ss_pred CCHHHHHHHHHHHHHHHHHh-----hccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHh-cchhhhhheeecc
Confidence 35566666666666666443 345789999999999 78999999999999999999999 9999999999887
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ .||||+.++.+++.+++++.++++|||+.+|+.+| ++ +|+.+|+|.||....+.+....++ +++.++.|
T Consensus 141 ~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a-~~---aG~~~i~v~~g~~~~~~l~~~~ad--~v~~~~~e 214 (233)
T 3s6j_A 141 DDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAA-RR---CKATGVGLLSGGYDIGELERAGAL--RVYEDPLD 214 (233)
T ss_dssp GGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHH-HH---TTCEEEEEGGGSCCHHHHHHTTCS--EEESSHHH
T ss_pred ccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHH-HH---CCCEEEEEeCCCCchHhHHhcCCC--EEECCHHH
Confidence 6 57999999999999999999999999999999999 99 999999999999998888877666 99999999
Q ss_pred HHhhcC
Q 027821 213 FSRKLK 218 (218)
Q Consensus 213 l~~~~~ 218 (218)
|..+++
T Consensus 215 l~~~l~ 220 (233)
T 3s6j_A 215 LLNHLD 220 (233)
T ss_dssp HHHTGG
T ss_pred HHHHHH
Confidence 998764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=165.66 Aligned_cols=147 Identities=12% Similarity=0.020 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC-CceEEc
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP-PDRIYG 135 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~-Fd~I~g 135 (218)
.+.+........+.++|.+.. .....++||+.++|+ ++|++++|+||+....++.++++ +|+..+ |+.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~-~~~~~~~~~~~~~ 160 (277)
T 3iru_A 86 SNEEDIKRLYDLFAPIQTRIV----AQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIA-AKEQGYTPASTVF 160 (277)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH----HHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HHHTTCCCSEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHh----hccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHh-cCcccCCCceEec
Confidence 355566667777777765443 455789999999999 78999999999999999999999 999988 999988
Q ss_pred CC----CCChHHHHHHHHhcCCCCC-CcEEEEcCChhhHHHhhccCccCCceEEEEecCCC-------------------
Q 027821 136 LG----TGPKVEVLKQLQKKPELQG-MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYN------------------- 191 (218)
Q Consensus 136 ~d----~kpkPe~l~~l~~~~~~~~-~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~------------------- 191 (218)
++ .||||++++.+++.+++++ ++|+||||+.+|+.+| ++ +|+.+|+|.||++
T Consensus 161 ~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a-~~---aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~ 236 (277)
T 3iru_A 161 ATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEG-LR---AGMWTVGVSCSGNEVGLDREDWQALSSDEQQS 236 (277)
T ss_dssp GGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHH-HH---TTCEEEEECSSSTTTCCCHHHHHHSCHHHHHH
T ss_pred HHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHH-HH---CCCeEEEEecCCcccccchhhhhhcchhhhhh
Confidence 76 5799999999999999999 9999999999999999 99 9999999999986
Q ss_pred ----CHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 192 ----TQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 192 ----~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
..+++....|+ ++++++.||..++
T Consensus 237 ~~~~~~~~l~~~~ad--~v~~~~~el~~~l 264 (277)
T 3iru_A 237 YRQHAEQRLFNAGAH--YVIDSVADLETVI 264 (277)
T ss_dssp HHHHHHHHHHHHTCS--EEESSGGGTHHHH
T ss_pred hhhhhHHHHhhCCCC--EEecCHHHHHHHH
Confidence 34566666666 9999999998876
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=163.07 Aligned_cols=148 Identities=16% Similarity=0.169 Sum_probs=124.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
.+.+.+.+..+.+.+.|.+.. .....++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~ 163 (243)
T 2hsz_A 89 LTEDEFKYFKRQFGFYYGENL----CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGG 163 (243)
T ss_dssp CCHHHHHHHHHHHHHHHHHHT----TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHhc----cccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHH-cCchheEEEEEec
Confidence 455555556666666665443 455689999999999 78999999999999999999999 9999999999887
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ .||+|+++..+++.+++++.+|+||||+.+|+.+| ++ +|+.+++|.||++....+....++ ++++++.|
T Consensus 164 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a-~~---aG~~~i~v~~g~~~~~~~~~~~ad--~vi~~~~e 237 (243)
T 2hsz_A 164 QSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAA-HS---AGCAVVGLTYGYNYNIPIAQSKPD--WIFDDFAD 237 (243)
T ss_dssp TTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHH-HH---HTCEEEEESSSCSTTCCGGGGCCS--EEESSGGG
T ss_pred ccCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHH-HH---CCCeEEEEcCCCCchhhhhhCCCC--EEECCHHH
Confidence 6 57999999999999998999999999999999999 99 999999999998754444444445 99999999
Q ss_pred HHhhcC
Q 027821 213 FSRKLK 218 (218)
Q Consensus 213 l~~~~~ 218 (218)
|...++
T Consensus 238 l~~~l~ 243 (243)
T 2hsz_A 238 ILKITQ 243 (243)
T ss_dssp GGGGTC
T ss_pred HHHHhC
Confidence 998764
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=155.74 Aligned_cols=125 Identities=15% Similarity=0.148 Sum_probs=107.1
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEE-----cCC----C
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIY-----GLG----T 138 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~-----g~d----~ 138 (218)
...+++||+.++|+ ++|++++|+||++. +.+...|++ +| .+|+.++ +++ .
T Consensus 24 ~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g--~~~~~~~~~~~~~~~~~~~~ 100 (179)
T 3l8h_A 24 DEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQ-MG--GVVDAIFMCPHGPDDGCACR 100 (179)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHH-TT--CCCCEEEEECCCTTSCCSSS
T ss_pred HHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHh-CC--CceeEEEEcCCCCCCCCCCC
Confidence 34689999999999 88999999999987 778889998 88 4566654 223 6
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 139 GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 139 kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||+|++++.+++++++++.+|+||||+.+|+++| ++ +|+++|+|.||++..+.+....+.|+++++++.|+..++
T Consensus 101 KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a-~~---aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l 175 (179)
T 3l8h_A 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAA-AQ---AGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQL 175 (179)
T ss_dssp TTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHH-HH---HTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH-HH---CCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHH
Confidence 7999999999999999999999999999999999 99 999999999999777666542345669999999999876
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=157.48 Aligned_cols=162 Identities=13% Similarity=0.154 Sum_probs=127.8
Q ss_pred HHHHhhhc-cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHH
Q 027821 42 GILENWSK-IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFAD 117 (218)
Q Consensus 42 ~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~ 117 (218)
+.++.+.| ....+.+.++.+.+.+......+.+.+.. +.....++||+.++|+ ++ ++++|+||++...++
T Consensus 40 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~ 113 (209)
T 2hdo_A 40 AQAQKTFPMAAEQAMTELGIAASEFDHFQAQYEDVMAS-----HYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELE 113 (209)
T ss_dssp HHHHHHTTSCHHHHHHHTTCCGGGHHHHHHHHHHHHTT-----CGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHH
T ss_pred HHHHHHcCCcHHHHHHHcCCCHHHHHHHHHHHHHHHhh-----hcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHH
Confidence 33456667 33444455566544444444444444322 1355789999999999 56 999999999999999
Q ss_pred HHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCH
Q 027821 118 ALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ 193 (218)
Q Consensus 118 ~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~ 193 (218)
..+++ +|+..+|+.+++++ .||+|++++.+++.+++++.++++|||+.+|+.+| ++ +|+.++++.||+...
T Consensus 114 ~~l~~-~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a-~~---aG~~~~~~~~~~~~~ 188 (209)
T 2hdo_A 114 SGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTA-QA---ANVDFGLAVWGMDPN 188 (209)
T ss_dssp HHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHH-HH---HTCEEEEEGGGCCTT
T ss_pred HHHHH-cChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHH-HH---cCCeEEEEcCCCCCh
Confidence 99999 99999999998875 57889999999999999999999999999999999 99 999999999998766
Q ss_pred HHHHhccCCCCeEEcChhHHHhhcC
Q 027821 194 KEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 194 ~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
+.+.. |++++.++.|+..+++
T Consensus 189 ~~~~~----a~~~~~~~~el~~~l~ 209 (209)
T 2hdo_A 189 ADHQK----VAHRFQKPLDILELFK 209 (209)
T ss_dssp GGGSC----CSEEESSGGGGGGGC-
T ss_pred hhhcc----CCEEeCCHHHHHHhhC
Confidence 55532 4599999999998874
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-21 Score=159.21 Aligned_cols=137 Identities=20% Similarity=0.263 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CC
Q 027821 67 DLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TG 139 (218)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~k 139 (218)
+..+.+.+.|.+.. .....++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.+++++ .|
T Consensus 65 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~K 139 (222)
T 2nyv_A 65 EYVEVFRKHYLENP----VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDI-LNLSGYFDLIVGGDTFGEKK 139 (222)
T ss_dssp HHHHHHHHHHHHCS----CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTSSCTTC
T ss_pred HHHHHHHHHHHHhc----cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCHHHheEEEecCcCCCCC
Confidence 34455666664433 455789999999999 78999999999999999999999 99999999999875 57
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|||+++..+++..++++.+|+||||+.+|+.+| ++ +|+.+|+|.||+...+. . .|+++++++.|+..++
T Consensus 140 p~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a-~~---aG~~~i~v~~g~~~~~~---~--~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 140 PSPTPVLKTLEILGEEPEKALIVGDTDADIEAG-KR---AGTKTALALWGYVKLNS---Q--IPDFTLSRPSDLVKLM 208 (222)
T ss_dssp CTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHH-HH---HTCEEEEETTSSCSCCC---C--CCSEEESSTTHHHHHH
T ss_pred CChHHHHHHHHHhCCCchhEEEECCCHHHHHHH-HH---CCCeEEEEcCCCCCccc---c--CCCEEECCHHHHHHHH
Confidence 999999999999998999999999999999999 99 99999999999866543 3 4559999999998765
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-21 Score=157.70 Aligned_cols=120 Identities=10% Similarity=-0.056 Sum_probs=99.6
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCC-C
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQG-M 157 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~-~ 157 (218)
...++|||+.++|+ ++|++++|+||+.+..+ ++. .+ .+|+.|+|++ .||+|+++..++.++++.+ .
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~---~~~-~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 106 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEALS---TPL-AA--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLE 106 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH---HHH-HT--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCST
T ss_pred ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH---HHh-cC--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence 34579999999999 78999999999998776 444 55 5789998876 5799999999999888765 7
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCC-----------------------HHHHHhccCCCCeEEcChhHHH
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT-----------------------QKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~-----------------------~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+|+|||||.+|+++| ++ |||.+|+|.||++. .+.+..+.++ ++++++.||.
T Consensus 107 ~~v~VGDs~~Di~aA-~~---aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d--~vi~~~~eL~ 180 (196)
T 2oda_A 107 GCVLISGDPRLLQSG-LN---AGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVH--SVIDHLGELE 180 (196)
T ss_dssp TCEEEESCHHHHHHH-HH---HTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS--EEESSGGGHH
T ss_pred cEEEEeCCHHHHHHH-HH---CCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCC--EEeCCHHHHH
Confidence 899999999999999 99 99999999999863 2233444444 9999999998
Q ss_pred hhc
Q 027821 215 RKL 217 (218)
Q Consensus 215 ~~~ 217 (218)
.++
T Consensus 181 ~~l 183 (196)
T 2oda_A 181 SCL 183 (196)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=154.16 Aligned_cols=143 Identities=11% Similarity=0.038 Sum_probs=120.9
Q ss_pred CHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC--ceEEc
Q 027821 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP--DRIYG 135 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F--d~I~g 135 (218)
+.+.+......+.+++... ....++||+.++|+ ++|++++|+||+....+...+++ |+..+| +.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~~~~~~ 157 (247)
T 3dv9_A 86 TEEEIKAIYQAKTEEFNKC------PKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH--NFPGIFQANLMVT 157 (247)
T ss_dssp CHHHHHHHHHHHHHHHTTS------CCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH--HSTTTCCGGGEEC
T ss_pred CHHHHHHHHHHHHHHHHhc------ccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh--hHHHhcCCCeEEe
Confidence 5666666666666655321 34679999999999 88999999999999999999987 999999 98988
Q ss_pred CC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 136 LG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 136 ~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
++ .||+|++++.+++.+++++++|++|||+.+|+.+| ++ +|+.+|+|.||....+.+....++ ++++++.
T Consensus 158 ~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a-~~---aG~~~i~v~~~~~~~~~l~~~~ad--~v~~~~~ 231 (247)
T 3dv9_A 158 AFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAG-VA---AGIFTIAVNTGPLHDNVLLNEGAN--LLFHSMP 231 (247)
T ss_dssp GGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHH-HH---TTSEEEEECCSSSCHHHHHTTTCS--EEESSHH
T ss_pred cccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHH-HH---CCCeEEEEcCCCCCHHHHHhcCCC--EEECCHH
Confidence 76 57999999999999999999999999999999999 99 999999999999998888776666 9999999
Q ss_pred HHHhhc
Q 027821 212 DFSRKL 217 (218)
Q Consensus 212 ~l~~~~ 217 (218)
||...+
T Consensus 232 el~~~l 237 (247)
T 3dv9_A 232 DFNKNW 237 (247)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998765
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=155.00 Aligned_cols=143 Identities=10% Similarity=-0.005 Sum_probs=124.3
Q ss_pred CHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC--ceEEc
Q 027821 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP--DRIYG 135 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F--d~I~g 135 (218)
+.+.+......+.+++... ....++||+.++|+ ++|++++|+||+....+...+++ |+..+| +.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~d~i~~ 158 (243)
T 3qxg_A 87 TQEEIESIYHEKSILFNSY------PEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH--NFPGMFHKELMVT 158 (243)
T ss_dssp CHHHHHHHHHHHHHHHHTS------SCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH--HSTTTCCGGGEEC
T ss_pred CHHHHHHHHHHHHHHHHhc------ccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH--hHHHhcCcceEEe
Confidence 5666666666666665332 34679999999999 88999999999999999999987 999999 88988
Q ss_pred CC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 136 LG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 136 ~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
++ .||+|++++.+++.+++++++|++|||+.+|+.+| ++ +|+.+|+|.||+...+.+....++ ++++++.
T Consensus 159 ~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a-~~---aG~~~i~v~~~~~~~~~l~~~~ad--~v~~s~~ 232 (243)
T 3qxg_A 159 AFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAG-HK---AGIFTIAVNTGPLDGQVLLDAGAD--LLFPSMQ 232 (243)
T ss_dssp TTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHH-HH---TTCEEEEECCSSSCHHHHHHTTCS--EEESCHH
T ss_pred HHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHH-HH---CCCEEEEEeCCCCCHHHHHhcCCC--EEECCHH
Confidence 76 57999999999999999999999999999999999 99 999999999999998888777666 9999999
Q ss_pred HHHhhc
Q 027821 212 DFSRKL 217 (218)
Q Consensus 212 ~l~~~~ 217 (218)
||...+
T Consensus 233 el~~~l 238 (243)
T 3qxg_A 233 TLCDSW 238 (243)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998765
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.7e-21 Score=156.81 Aligned_cols=124 Identities=16% Similarity=0.108 Sum_probs=110.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
...++||+.++|+ ++|++++|+||+....++..+++ +|+..+|+.+++++ .||+|++++.+++.+++++.+|
T Consensus 92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~ 170 (241)
T 2hoq_A 92 YLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILR-LELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEA 170 (241)
T ss_dssp HCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHH-cCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccE
Confidence 4578999999999 78999999999999999999999 99999999998875 5799999999999999999999
Q ss_pred EEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHH-hccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKERE-EAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~-~a~~~p~~~~~~~~~l~~~~ 217 (218)
+||||+. +|+.+| ++ +|+.+++|.||+...+.+. ...++ ++++++.||..++
T Consensus 171 i~iGD~~~~Di~~a-~~---aG~~~~~v~~g~~~~~~~~~~~~~~--~~i~~~~el~~~l 224 (241)
T 2hoq_A 171 LMVGDRLYSDIYGA-KR---VGMKTVWFRYGKHSERELEYRKYAD--YEIDNLESLLEVL 224 (241)
T ss_dssp EEEESCTTTTHHHH-HH---TTCEEEEECCSCCCHHHHTTGGGCS--EEESSTTHHHHHH
T ss_pred EEECCCchHhHHHH-HH---CCCEEEEECCCCCCcccccccCCCC--EEECCHHHHHHHH
Confidence 9999998 999999 99 9999999999998876652 33445 9999999998765
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=153.29 Aligned_cols=142 Identities=8% Similarity=-0.037 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHhccccccc-ccCCCCCChHHHHH---hC-CCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--
Q 027821 65 LVDLFGKVRDEWMDKDLTTWI-GANRFYPGIPDALK---FA-SSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-- 137 (218)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~pGv~e~L~---~~-g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-- 137 (218)
+......+.+.+.+.. . ....++||+.++|+ ++ |++++|+||+....++..+++ +|+..+|+.+++++
T Consensus 72 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~ 146 (234)
T 2hcf_A 72 FDKAKETYIALFRERA----RREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDA 146 (234)
T ss_dssp HHHHHHHHHHHHHHHC----CGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTC
T ss_pred HHHHHHHHHHHHHHHh----ccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHH-CCchhhcCcceecCCC
Confidence 4455555665554332 2 34578999999999 67 899999999999999999999 99999999876554
Q ss_pred -CC--ChHHHHHHHHhcCC--CCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 138 -TG--PKVEVLKQLQKKPE--LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 138 -~k--pkPe~l~~l~~~~~--~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.+ |+|+.++.+++.++ +++.+|++|||+.+|+.+| ++ ||+.+++|.||+...+.+....++ +++.++.|
T Consensus 147 ~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a-~~---aG~~~i~v~~~~~~~~~~~~~~a~--~v~~~~~e 220 (234)
T 2hcf_A 147 LDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCA-RE---LDARSIAVATGNFTMEELARHKPG--TLFKNFAE 220 (234)
T ss_dssp SSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHH-HT---TTCEEEEECCSSSCHHHHHTTCCS--EEESCSCC
T ss_pred cCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHH-HH---CCCcEEEEcCCCCCHHHHHhCCCC--EEeCCHHh
Confidence 22 45677888888888 7899999999999999999 99 999999999999888777655455 99999999
Q ss_pred HHhhc
Q 027821 213 FSRKL 217 (218)
Q Consensus 213 l~~~~ 217 (218)
|..++
T Consensus 221 l~~~l 225 (234)
T 2hcf_A 221 TDEVL 225 (234)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-21 Score=163.27 Aligned_cols=122 Identities=14% Similarity=0.086 Sum_probs=104.8
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
...++||+.++|+ ++|++++|+||+.. ...+|++ +|+..+||.|++++ .||+|+++..+++++++++++|
T Consensus 93 ~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 169 (243)
T 4g9b_A 93 VNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAA-LELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQAC 169 (243)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHH-TTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cccccccHHHHHHhhhcccccceecccccc--hhhhhhh-hhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHE
Confidence 3468999999999 89999999999875 5678999 99999999998876 5799999999999999999999
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+|||||.+|+++| ++ |||++|+|.||+...+.+....++ +.++++.++.+.+
T Consensus 170 l~VgDs~~di~aA-~~---aG~~~I~V~~g~~~ad~~~~~~~~--l~~~~l~~~~~~l 221 (243)
T 4g9b_A 170 IGIEDAQAGIDAI-NA---SGMRSVGIGAGLTGAQLLLPSTES--LTWPRLSAFWQNV 221 (243)
T ss_dssp EEEESSHHHHHHH-HH---HTCEEEEESTTCCSCSEEESSGGG--CCHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHH-HH---cCCEEEEECCCCCcHHHhcCChhh--cCHHHHHHHHHHH
Confidence 9999999999999 99 999999999998776555444444 6667777776554
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.7e-20 Score=149.36 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=110.3
Q ss_pred cccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 85 IGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
.....++||+.++|+ ++|++++|+||.....++..++. +|+..+|+.+++++ .||+|+.++.+++.+++++.+
T Consensus 103 ~~~~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 181 (240)
T 3qnm_A 103 PTKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRS-AGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRE 181 (240)
T ss_dssp GGCCCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGG
T ss_pred hhcCCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHH-cChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCccc
Confidence 455789999999999 88999999999999999999999 99999999998875 579999999999999999999
Q ss_pred EEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|++|||+. +|+++| ++ +|+.++++.+|... .....|+++++++.|+..|+
T Consensus 182 ~~~iGD~~~~Di~~a-~~---aG~~~~~~~~~~~~-----~~~~~~d~vi~sl~e~~~~~ 232 (240)
T 3qnm_A 182 SLMIGDSWEADITGA-HG---VGMHQAFYNVTERT-----VFPFQPTYHIHSLKELMNLL 232 (240)
T ss_dssp EEEEESCTTTTHHHH-HH---TTCEEEEECCSCCC-----CCSSCCSEEESSTHHHHHHT
T ss_pred EEEECCCchHhHHHH-HH---cCCeEEEEcCCCCC-----CcCCCCceEECCHHHHHHHH
Confidence 99999995 999999 99 99999999999761 12345669999999999886
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.9e-21 Score=153.89 Aligned_cols=125 Identities=11% Similarity=0.086 Sum_probs=108.9
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCCh---HHHHHHHHHhcCCCCCCceEEcCC--------CCChHHHHHHHHhc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKK 151 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~---~~~~~iL~~~~gl~~~Fd~I~g~d--------~kpkPe~l~~l~~~ 151 (218)
....++||+.++|+ ++|++++|+||++. ..+..+|++ +|+..+|+.|++++ .||+|++++.++++
T Consensus 31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~ 109 (189)
T 3ib6_A 31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN-FGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNA 109 (189)
T ss_dssp TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-TTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHH
T ss_pred CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh-cCchhheEEEEEccccccccCCCCcCHHHHHHHHHH
Confidence 34789999999999 88999999999987 899999999 99999999998875 27999999999999
Q ss_pred CCCCCCcEEEEcCC-hhhHHHhhccCccCCceEEEEecCCCCH--HHHHhccCCCCeEEc--ChhHHHhhc
Q 027821 152 PELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQ--KEREEAASIPRIQLL--QLSDFSRKL 217 (218)
Q Consensus 152 ~~~~~~e~l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~--~~l~~a~~~p~~~~~--~~~~l~~~~ 217 (218)
.++++.+|+||||+ ..|+.+| ++ +|+++|+|.+|.... +.+.. ..|++++. ++.||...|
T Consensus 110 ~~~~~~~~l~VGD~~~~Di~~A-~~---aG~~~i~v~~~~~~~~~~~~~~--~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 110 LQIDKTEAVMVGNTFESDIIGA-NR---AGIHAIWLQNPEVCLQDERLPL--VAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp HTCCGGGEEEEESBTTTTHHHH-HH---TTCEEEEECCTTTCBCSSCCCB--CSSSCEEEESSGGGHHHHH
T ss_pred cCCCcccEEEECCCcHHHHHHH-HH---CCCeEEEECCcccccccccccc--CCCcceeccccHHhHHHHH
Confidence 99999999999999 7999999 99 999999999987532 33322 25669999 999998775
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.2e-20 Score=153.98 Aligned_cols=163 Identities=13% Similarity=0.061 Sum_probs=128.9
Q ss_pred ChHHHHHhhhc-----cHHHHHHhcCC--CHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEE
Q 027821 39 TVEGILENWSK-----IKPVIMEDWSE--NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV 108 (218)
Q Consensus 39 ~~~~~~~~~~G-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIv 108 (218)
+..+.+..+.| ....+...++. +.+......+.+.+.+ ....++||+.++|+ ++|++++|+
T Consensus 62 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~g~~~~i~ 132 (259)
T 4eek_A 62 DLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPDFLDVLETRFNAAM---------TGVTAIEGAAETLRALRAAGVPFAIG 132 (259)
T ss_dssp CHHHHHHHTTTCCHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHH---------TTCEECTTHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHh---------ccCCcCccHHHHHHHHHHCCCeEEEE
Confidence 45566666666 22223333443 3333333333333332 34679999999999 679999999
Q ss_pred cCCChHHHHHHHHHhcCCCCCCce-EEcCC-----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCce
Q 027821 109 TTKQSRFADALLRELAGVTIPPDR-IYGLG-----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 109 Tnk~~~~~~~iL~~~~gl~~~Fd~-I~g~d-----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
||.....++..+++ +|+..+|+. +++++ .||+|+.++.+++.+++++.+|+||||+.+|+++| ++ +|+.
T Consensus 133 s~~~~~~~~~~l~~-~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a-~~---aG~~ 207 (259)
T 4eek_A 133 SNSERGRLHLKLRV-AGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAG-LA---AGAT 207 (259)
T ss_dssp CSSCHHHHHHHHHH-TTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHH-HH---HTCE
T ss_pred eCCCHHHHHHHHHh-cChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHH-HH---CCCE
Confidence 99999999999999 999999999 88764 45889999999999999999999999999999999 99 9999
Q ss_pred EEEEecCCCC----HHHHHhccCCCCeEEcChhHHHhhc
Q 027821 183 LYLGDWGYNT----QKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 183 ~i~V~~G~~~----~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+|+|.+|... .+++....++ ++++++.||.+++
T Consensus 208 ~i~v~~g~~~~~~~~~~~~~~~ad--~vi~~l~el~~~l 244 (259)
T 4eek_A 208 LWGLLVPGHPHPDGAAALSRLGAA--RVLTSHAELRAAL 244 (259)
T ss_dssp EEEECCTTSCCSSCHHHHHHHTCS--EEECSHHHHHHHH
T ss_pred EEEEccCCCcccccHHHHHhcCcc--hhhCCHHHHHHHH
Confidence 9999999765 6677766666 9999999999876
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=159.07 Aligned_cols=124 Identities=10% Similarity=0.042 Sum_probs=106.4
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
....++||+.++|+ +++++++|+||+++..++..|++ +|+..+|+.|++++ .||+|++++.+++++++++.+|
T Consensus 118 ~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 196 (260)
T 2gfh_A 118 QHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC 196 (260)
T ss_dssp HTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred hcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHh-cCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 34679999999999 66799999999999999999999 99999999987765 5799999999999999999999
Q ss_pred EEEcCC-hhhHHHhhccCccCCc-eEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDR-LATLKNVIKEPELDGW-NLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs-~~Di~aA~k~~~~AGv-~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+||||+ .+|+++| ++ +|+ .+|+|.++.... ... ...|+++++++.||...+
T Consensus 197 ~~vGDs~~~Di~~A-~~---aG~~~~i~v~~~~~~~-~~~--~~~~~~~i~~~~el~~~l 249 (260)
T 2gfh_A 197 VMVGDTLETDIQGG-LN---AGLKATVWINKSGRVP-LTS--SPMPHYMVSSVLELPALL 249 (260)
T ss_dssp EEEESCTTTHHHHH-HH---TTCSEEEEECTTCCCC-SSC--CCCCSEEESSGGGHHHHH
T ss_pred EEECCCchhhHHHH-HH---CCCceEEEEcCCCCCc-Ccc--cCCCCEEECCHHHHHHHH
Confidence 999995 9999999 99 999 899998874331 112 234569999999998764
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-19 Score=143.43 Aligned_cols=145 Identities=17% Similarity=0.026 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--
Q 027821 63 DALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-- 137 (218)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-- 137 (218)
+........+...+.+.. .....++||+.++|+ +.|++++|+||.....++..+++ +|+..+|+.+++++
T Consensus 67 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 141 (225)
T 3d6j_A 67 DQLESFRQEYSKEADIYM----NANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRN-HMPDDWFDIIIGGEDV 141 (225)
T ss_dssp HHHHHHHHHHHHHHHHHT----GGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHT-SSCTTCCSEEECGGGC
T ss_pred HHHHHHHHHHHHHHHHhc----cccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHH-cCchhheeeeeehhhc
Confidence 334444555555554332 445678999999998 77999999999999999999999 99999999998765
Q ss_pred --CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 138 --TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 138 --~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
.||+|+.+..+++.+++++.++++|||+.+|+.+| ++ +|+.+++|.||.+..+++....++ +++.++.|+..
T Consensus 142 ~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~-~~---aG~~~~~~~~~~~~~~~l~~~~ad--~v~~~~~el~~ 215 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTA-AA---AGVSFTGVTSGMTTAQEFQAYPYD--RIISTLGQLIS 215 (225)
T ss_dssp SSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHH-HH---HTCEEEEETTSSCCTTGGGGSCCS--EEESSGGGGC-
T ss_pred CCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHH-HH---CCCeEEEECCCCCChHHHhhcCCC--EEECCHHHHHH
Confidence 56889999999999999999999999999999999 99 999999999998877777665556 99999999987
Q ss_pred hcC
Q 027821 216 KLK 218 (218)
Q Consensus 216 ~~~ 218 (218)
+++
T Consensus 216 ~l~ 218 (225)
T 3d6j_A 216 VPE 218 (225)
T ss_dssp ---
T ss_pred hhh
Confidence 763
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.2e-20 Score=156.42 Aligned_cols=122 Identities=11% Similarity=0.123 Sum_probs=104.1
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhc---CCCCCCceEEcCC--CCChHHHHHHHHhcCCCCCC
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELA---GVTIPPDRIYGLG--TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~---gl~~~Fd~I~g~d--~kpkPe~l~~l~~~~~~~~~ 157 (218)
....+|||+.++|+ ++|++++|+||++...++.+|++ + |+..+||.|++++ .||+|++++.++++.++++.
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh-hcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcc
Confidence 44689999999999 78999999999999999999995 5 5999999998755 67889999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+|+||||+.+|+++| ++ +|+++|+|.|+.....+.....++ ++++++.||.
T Consensus 206 ~~l~VgDs~~di~aA-~~---aG~~~i~v~~~~~~~~~~~~~~~~--~~i~~l~el~ 256 (261)
T 1yns_A 206 NILFLTDVTREASAA-EE---ADVHVAVVVRPGNAGLTDDEKTYY--SLITSFSELY 256 (261)
T ss_dssp GEEEEESCHHHHHHH-HH---TTCEEEEECCTTCCCCCHHHHHHS--CEESSGGGCB
T ss_pred cEEEEcCCHHHHHHH-HH---CCCEEEEEeCCCCCcccccccCCC--EEECCHHHhC
Confidence 999999999999999 99 999999998865543332233344 8999999873
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-20 Score=168.32 Aligned_cols=125 Identities=15% Similarity=0.010 Sum_probs=109.6
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc--eEEcCC---------------CCChHHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLG---------------TGPKVEVLK 146 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd--~I~g~d---------------~kpkPe~l~ 146 (218)
..+++||+.++|+ ++|++++|+||+++..++..|++ +|+..+|+ .|++++ .||+|+++.
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~-lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-cCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 3578999999999 78999999999999999999999 99999999 788753 479999999
Q ss_pred HHHhcCC--------------CCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC---HHHHHhccCCCCeEEcC
Q 027821 147 QLQKKPE--------------LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT---QKEREEAASIPRIQLLQ 209 (218)
Q Consensus 147 ~l~~~~~--------------~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~---~~~l~~a~~~p~~~~~~ 209 (218)
.++...+ +++.+|+||||+.+|+++| ++ |||++|+|.||++. .+++....++ +++++
T Consensus 292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aA-k~---AG~~~I~V~~g~~~~~~~~~l~~~~ad--~vi~s 365 (384)
T 1qyi_A 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSA-QK---IGATFIGTLTGLKGKDAAGELEAHHAD--YVINH 365 (384)
T ss_dssp HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHH-HH---HTCEEEEESCBTTBGGGHHHHHHTTCS--EEESS
T ss_pred HHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHH-HH---cCCEEEEECCCccccccHHHHhhcCCC--EEECC
Confidence 8888877 7899999999999999999 99 99999999999863 4555555555 99999
Q ss_pred hhHHHhhcC
Q 027821 210 LSDFSRKLK 218 (218)
Q Consensus 210 ~~~l~~~~~ 218 (218)
+.||...++
T Consensus 366 l~eL~~~l~ 374 (384)
T 1qyi_A 366 LGELRGVLD 374 (384)
T ss_dssp GGGHHHHHS
T ss_pred HHHHHHHHH
Confidence 999987653
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=150.57 Aligned_cols=146 Identities=10% Similarity=0.040 Sum_probs=120.8
Q ss_pred CHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC-ceEEcC
Q 027821 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGL 136 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F-d~I~g~ 136 (218)
+.+........+.+.|.+.. .....++||+.++|+ +.|++++|+||+....+..++++ +|+..+| +.++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~ 153 (267)
T 1swv_A 79 TEADIQEMYEEFEEILFAIL----PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKE-AALQGYKPDFLVTP 153 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHHG----GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCG
T ss_pred CHHHHHHHHHHHHHHHHHhh----ccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCcccChHheecC
Confidence 44455555666666554332 445679999999999 78999999999999999999999 9998886 888876
Q ss_pred C----CCChHHHHHHHHhcCCCCC-CcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC-------------------
Q 027821 137 G----TGPKVEVLKQLQKKPELQG-MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT------------------- 192 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~-~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~------------------- 192 (218)
+ .||||+.+..+++.+++++ .+|++|||+.+|+.+| ++ ||+.+++|.||+..
T Consensus 154 ~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a-~~---aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (267)
T 1swv_A 154 DDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEG-RN---AGMWTVGVILGSSELGLTEEEVENMDSVELREK 229 (267)
T ss_dssp GGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHH-HH---TTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHH
T ss_pred CccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHH-HH---CCCEEEEEcCCCCccCccHHHHhhchhhhhhhh
Confidence 5 5699999999999999888 8999999999999999 99 99999999999873
Q ss_pred ----HHHHHhccCCCCeEEcChhHHHhhc
Q 027821 193 ----QKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 193 ----~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+++..+.++ ++++++.||...+
T Consensus 230 ~~~~~~~~~~~~ad--~v~~~~~el~~~l 256 (267)
T 1swv_A 230 IEVVRNRFVENGAH--FTIETMQELESVM 256 (267)
T ss_dssp HHHHHHHHHHTTCS--EEESSGGGHHHHH
T ss_pred hhhHHHHHHhcCCc--eeccCHHHHHHHH
Confidence 4445555556 9999999998765
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.81 E-value=9.3e-20 Score=145.47 Aligned_cols=138 Identities=12% Similarity=0.010 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CC
Q 027821 67 DLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TG 139 (218)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~k 139 (218)
.....+.+.+.+.. ......++||+.++|+ ++|++++|+||.....++..+++ +|+..+|+.+++++ .|
T Consensus 70 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~k 145 (214)
T 3e58_A 70 TLQEEYNTYKQNNP---LPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEE-NRLQGFFDIVLSGEEFKESK 145 (214)
T ss_dssp HHHHHHHHHHHHSC---CCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGCSSCT
T ss_pred HHHHHHHHHHHHhh---cccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHH-cCcHhheeeEeecccccCCC
Confidence 34445555554332 0112468999999999 78999999999999999999999 99999999998875 57
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|+|+.++.+++.+++++.+|++|||+.+|+.+| ++ +|+.++++.+|...... . .|+++++++.|+..++
T Consensus 146 p~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a-~~---aG~~~~~~~~~~~~~~~---~--~a~~~~~~~~el~~~i 214 (214)
T 3e58_A 146 PNPEIYLTALKQLNVQASRALIIEDSEKGIAAG-VA---ADVEVWAIRDNEFGMDQ---S--AAKGLLDSLTDVLDLI 214 (214)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHH-HH---TTCEEEEECCSSSCCCC---T--TSSEEESSGGGGGGGC
T ss_pred CChHHHHHHHHHcCCChHHeEEEeccHhhHHHH-HH---CCCEEEEECCCCccchh---c--cHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999 99 99999999887544322 3 4559999999998864
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.81 E-value=7e-20 Score=149.40 Aligned_cols=122 Identities=9% Similarity=0.062 Sum_probs=110.2
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+ ++|++++|+||++...++..+++ +|+..+|+.+++++ .||+|++++.+++.+++++.+|+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKS-AGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL 176 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHT-TTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHH-CCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE
Confidence 578999999999 78999999999999999999999 99999999998876 57999999999999999999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||+.+|+.+| ++ +|+.+++|.+|....+.+ ...|+++++++.||..++
T Consensus 177 ~vGD~~~Di~~a-~~---~G~~~~~v~~~~~~~~~~---~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 177 FVSSNGWDACGA-TW---HGFTTFWINRLGHPPEAL---DVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp EEESCHHHHHHH-HH---HTCEEEEECTTCCCCCSS---SCCCSEEESSHHHHHHHH
T ss_pred EEeCCHHHHHHH-HH---cCCEEEEEcCCCCCchhc---cCCCCEEECCHHHHHHHH
Confidence 999999999999 99 999999999987766554 234559999999999876
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=149.22 Aligned_cols=124 Identities=14% Similarity=0.070 Sum_probs=106.7
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC------CCChHHHHHHHHhcCCCCC
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG------TGPKVEVLKQLQKKPELQG 156 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d------~kpkPe~l~~l~~~~~~~~ 156 (218)
....++||+.++|+ ++|++++|+||+....+...+.+.+|+..+|+.+++++ .||+|++++.+++.+++++
T Consensus 109 ~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 188 (250)
T 3l5k_A 109 PTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPP 188 (250)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCC
T ss_pred ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCC
Confidence 45789999999999 78999999999998888877754158999999988765 4699999999999999887
Q ss_pred --CcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 157 --MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 157 --~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
++|++|||+.+|+++| ++ +|+.+++|.+|....+ . ...|+++++++.||..++
T Consensus 189 ~~~~~i~iGD~~~Di~~a-~~---aG~~~i~v~~~~~~~~--~--~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 189 AMEKCLVFEDAPNGVEAA-LA---AGMQVVMVPDGNLSRD--L--TTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp CGGGEEEEESSHHHHHHH-HH---TTCEEEECCCTTSCGG--G--STTSSEECSCGGGCCGGG
T ss_pred CcceEEEEeCCHHHHHHH-HH---cCCEEEEEcCCCCchh--h--cccccEeecCHHHhhHHH
Confidence 9999999999999999 99 9999999999987754 2 234459999999997765
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.3e-20 Score=148.39 Aligned_cols=125 Identities=15% Similarity=0.113 Sum_probs=107.2
Q ss_pred cccCCCCCChHHHHH---hCC-CcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEE
Q 027821 85 IGANRFYPGIPDALK---FAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g-~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
.....++||+.++|+ ++| ++++|+||.....+...+++ +|+..+|+.+++.. ||||+.++.+++.+++++++|+
T Consensus 101 ~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~-kpk~~~~~~~~~~lgi~~~~~i 178 (234)
T 3ddh_A 101 KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLER-SGLSPYFDHIEVMS-DKTEKEYLRLLSILQIAPSELL 178 (234)
T ss_dssp TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHH-HTCGGGCSEEEEES-CCSHHHHHHHHHHHTCCGGGEE
T ss_pred hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHH-hCcHhhhheeeecC-CCCHHHHHHHHHHhCCCcceEE
Confidence 455689999999999 778 99999999999999999999 99999999998764 7999999999999999999999
Q ss_pred EEcCCh-hhHHHhhccCccCCceEEEE----ecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 161 FVEDRL-ATLKNVIKEPELDGWNLYLG----DWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 161 ~IGDs~-~Di~aA~k~~~~AGv~~i~V----~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
+|||+. +|+.+| ++ +|+.+++| .||+...+. .... |+++++++.||..++.
T Consensus 179 ~iGD~~~~Di~~a-~~---aG~~~v~v~~~~~~g~~~~~~-~~~~--~d~v~~~l~el~~~l~ 234 (234)
T 3ddh_A 179 MVGNSFKSDIQPV-LS---LGGYGVHIPFEVMWKHEVTET-FAHE--RLKQVKRLDDLLSLLG 234 (234)
T ss_dssp EEESCCCCCCHHH-HH---HTCEEEECCCCTTCCCC---C-CCCT--TEEECSSGGGHHHHCC
T ss_pred EECCCcHHHhHHH-HH---CCCeEEEecCCcccccCCccc-ccCC--CceecccHHHHHHhcC
Confidence 999996 999999 99 99999999 566655443 2222 2599999999998874
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=152.73 Aligned_cols=122 Identities=14% Similarity=0.174 Sum_probs=108.2
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+ ++|++++|+||+... +..+|++ +|+..+|+.+++++ .||+|+++..++..+++++.+|+
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~ 182 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGG-LGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAA 182 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHH-TTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHh-CCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 479999999999 789999999998875 6899999 99999999998875 67999999999999999999999
Q ss_pred EEcCCh-hhHHHhhccCccCCceEEEEecCCCCH-HHHHhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQ-KEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~-~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||+. +|+++| ++ +|+.++++.+|.... +.+....++ +++.++.||..++
T Consensus 183 ~vGD~~~~Di~~a-~~---aG~~~i~~~~~~~~~~~~~~~~~ad--~v~~~l~el~~~l 235 (263)
T 3k1z_A 183 HVGDNYLCDYQGP-RA---VGMHSFLVVGPQALDPVVRDSVPKE--HILPSLAHLLPAL 235 (263)
T ss_dssp EEESCHHHHTHHH-HT---TTCEEEEECCSSCCCHHHHHHSCGG--GEESSGGGHHHHH
T ss_pred EECCCcHHHHHHH-HH---CCCEEEEEcCCCCCchhhcccCCCc--eEeCCHHHHHHHH
Confidence 999997 999999 99 999999999997554 345555555 9999999999876
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=147.88 Aligned_cols=144 Identities=12% Similarity=0.158 Sum_probs=118.8
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce
Q 027821 55 MEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDR 132 (218)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~ 132 (218)
....+++.+........+.+.|.+. .....++||+.++|+ +..++++|+||.+.. +++ +|+..+|+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~-~~l~~~f~~ 144 (230)
T 3vay_A 76 LEDAGYDSDEAQQLADESFEVFLHG-----RHQVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRR-LGLADYFAF 144 (230)
T ss_dssp HHTTTCCHHHHHHHHHHHHHHHHHH-----HTCCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGG-STTGGGCSE
T ss_pred HHHhCCChhhhHHHHHHHHHHHHHh-----hccCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhh-cCcHHHeee
Confidence 3345777666666666666666443 345789999999999 444999999999875 788 999999999
Q ss_pred EEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE
Q 027821 133 IYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL 207 (218)
Q Consensus 133 I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~ 207 (218)
+++++ .||+|++++.+++..++++.+|+||||+. +|+.+| ++ +|+.+++|.+|....+. .. .|++++
T Consensus 145 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a-~~---aG~~~~~v~~~~~~~~~--~~--~~~~~~ 216 (230)
T 3vay_A 145 ALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGA-QQ---AGMRAIWYNPQGKAWDA--DR--LPDAEI 216 (230)
T ss_dssp EEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHH-HH---TTCEEEEECTTCCCCCS--SS--CCSEEE
T ss_pred eEEccccCCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHH-HH---CCCEEEEEcCCCCCCcc--cC--CCCeeE
Confidence 98875 57999999999999999999999999998 999999 99 99999999999876554 33 455999
Q ss_pred cChhHHHhhc
Q 027821 208 LQLSDFSRKL 217 (218)
Q Consensus 208 ~~~~~l~~~~ 217 (218)
+++.||..++
T Consensus 217 ~~l~el~~~l 226 (230)
T 3vay_A 217 HNLSQLPEVL 226 (230)
T ss_dssp SSGGGHHHHH
T ss_pred CCHHHHHHHH
Confidence 9999998875
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3e-19 Score=145.56 Aligned_cols=123 Identities=19% Similarity=0.209 Sum_probs=108.1
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCC-CCCC
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPE-LQGM 157 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~-~~~~ 157 (218)
....++||+.++|+ ++ ++++|+||+....++..+++ +|+..+|+.+++++ .||+|++++.+++.++ +++.
T Consensus 100 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~ 177 (238)
T 3ed5_A 100 EGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRD-SGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAE 177 (238)
T ss_dssp TCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGG
T ss_pred hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHH-cChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChh
Confidence 34679999999999 55 99999999999999999999 99999999998875 6799999999999999 9999
Q ss_pred cEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 158 TLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 158 e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
++++|||+. +|+++| ++ +|+.+|+|.+|..... ... .|++++.++.||..+++
T Consensus 178 ~~i~vGD~~~~Di~~a-~~---aG~~~i~~~~~~~~~~--~~~--~ad~v~~~~~el~~~l~ 231 (238)
T 3ed5_A 178 HTLIIGDSLTADIKGG-QL---AGLDTCWMNPDMKPNV--PEI--IPTYEIRKLEELYHILN 231 (238)
T ss_dssp GEEEEESCTTTTHHHH-HH---TTCEEEEECTTCCCCT--TCC--CCSEEESSGGGHHHHHT
T ss_pred HeEEECCCcHHHHHHH-HH---CCCEEEEECCCCCCCc--ccC--CCCeEECCHHHHHHHHH
Confidence 999999998 999999 99 9999999999864432 223 45599999999998763
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-19 Score=147.45 Aligned_cols=122 Identities=17% Similarity=0.157 Sum_probs=108.0
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .||+|++++.+++..++++.+|+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 182 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC 182 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHh-cCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 579999999999 78999999999999999999999 99999999998875 57999999999999999999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCC-CeEEcChhHHHhhcC
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIP-RIQLLQLSDFSRKLK 218 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p-~~~~~~~~~l~~~~~ 218 (218)
||||+.+|+.+| ++ +|+.+++|.||.. .+.+ ...| +++++++.||...++
T Consensus 183 ~iGD~~~Di~~a-~~---aG~~~~~v~~~~~-~~~~---~~~~~~~~~~~~~el~~~l~ 233 (240)
T 2no4_A 183 FVSSNAWDLGGA-GK---FGFNTVRINRQGN-PPEY---EFAPLKHQVNSLSELWPLLA 233 (240)
T ss_dssp EEESCHHHHHHH-HH---HTCEEEEECTTCC-CCCC---TTSCCSEEESSGGGHHHHHC
T ss_pred EEeCCHHHHHHH-HH---CCCEEEEECCCCC-CCcc---cCCCCceeeCCHHHHHHHHH
Confidence 999999999999 99 9999999999976 2222 2345 599999999988763
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=146.63 Aligned_cols=122 Identities=16% Similarity=0.115 Sum_probs=108.8
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC--ceEEcCC---CCChHHHHHHHHhcCCCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP--DRIYGLG---TGPKVEVLKQLQKKPELQG 156 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F--d~I~g~d---~kpkPe~l~~l~~~~~~~~ 156 (218)
.....++||+.++|+ ++|++++|+||+....++..+++ +|+..+| +.+++.+ .||+|++++.+++.+++++
T Consensus 66 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~ 144 (205)
T 3m9l_A 66 AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEA-IGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSP 144 (205)
T ss_dssp EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCG
T ss_pred hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHH-cCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCH
Confidence 445679999999999 78999999999999999999999 9999999 8898886 5799999999999999999
Q ss_pred CcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 157 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+|+||||+.+|+++| ++ +|+.+|++.+|..... ..++ ++++++.||...+
T Consensus 145 ~~~i~iGD~~~Di~~a-~~---aG~~~i~v~~~~~~~~----~~ad--~v~~~~~el~~~~ 195 (205)
T 3m9l_A 145 SRMVMVGDYRFDLDCG-RA---AGTRTVLVNLPDNPWP----ELTD--WHARDCAQLRDLL 195 (205)
T ss_dssp GGEEEEESSHHHHHHH-HH---HTCEEEECSSSSCSCG----GGCS--EECSSHHHHHHHH
T ss_pred HHEEEECCCHHHHHHH-HH---cCCEEEEEeCCCCccc----ccCC--EEeCCHHHHHHHH
Confidence 9999999999999999 99 9999999999875322 1245 9999999998765
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.80 E-value=9.9e-20 Score=152.63 Aligned_cols=137 Identities=15% Similarity=0.117 Sum_probs=106.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
.+..........+.++|.... +. .....++||+.++|+ ++|++++++|++.. +...|++ +|+..+||.|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~-~gl~~~Fd~i~~~ 163 (250)
T 4gib_A 89 FSEEEKVRMAEEKNNYYVSLI-DE-ITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNH-LGISDKFDFIADA 163 (250)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH-TT-CCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-HTCGGGCSEECCG
T ss_pred CCHHHHHHHHHHHHHHHHHHH-hh-ccccccchhHHHHHHHHHhcccccccccccch--hhhHhhh-cccccccceeecc
Confidence 344444444444555543321 11 234568999999999 89999999888764 5678999 9999999999988
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ .||+|+++..+++++++++.+|+|||||.+|+++| ++ ||+++|+|.. .+.+. .+| ++++++.|
T Consensus 164 ~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA-~~---aG~~~i~v~~----~~~~~--~ad--~vi~~l~e 231 (250)
T 4gib_A 164 GKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAI-NS---ANMFSVGVGN----YENLK--KAN--LVVDSTNQ 231 (250)
T ss_dssp GGCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHH-HH---TTCEEEEESC----TTTTT--TSS--EEESSGGG
T ss_pred cccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHH-HH---cCCEEEEECC----hhHhc--cCC--EEECChHh
Confidence 6 57999999999999999999999999999999999 99 9999999942 22332 334 99999998
Q ss_pred H
Q 027821 213 F 213 (218)
Q Consensus 213 l 213 (218)
|
T Consensus 232 L 232 (250)
T 4gib_A 232 L 232 (250)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-19 Score=147.23 Aligned_cols=124 Identities=14% Similarity=0.179 Sum_probs=110.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
...++||+.++|+ ++|++++|+||.+...++..+++ +|+..+|+.+++++ .||+|+.++.+++.+++++.+|
T Consensus 94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGN-SGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHH-CCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 4679999999999 78999999999999999999999 99999999998875 5799999999999999999999
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
++|||+.+|+.+| ++ +|+.+++|.+|....+.+ ...|+++++++.||..+++
T Consensus 173 ~~iGD~~~Di~~a-~~---aG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~el~~~l~ 224 (230)
T 3um9_A 173 LFVSCNSWDATGA-KY---FGYPVCWINRSNGVFDQL---GVVPDIVVSDVGVLASRFS 224 (230)
T ss_dssp EEEESCHHHHHHH-HH---HTCCEEEECTTSCCCCCS---SCCCSEEESSHHHHHHTCC
T ss_pred EEEeCCHHHHHHH-HH---CCCEEEEEeCCCCccccc---cCCCcEEeCCHHHHHHHHH
Confidence 9999999999999 99 999999999996655433 2345599999999998874
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.2e-19 Score=144.98 Aligned_cols=138 Identities=14% Similarity=0.143 Sum_probs=104.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
++.+........+.+.|.+.. .. .....++||+.++|+ ++|++++|+||+.. ++.++++ +|+..+|+.++++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~-~gl~~~f~~i~~~ 139 (233)
T 3nas_A 65 YTNAEKQELMHRKNRDYQMLI-SK-LTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRR-LAIIDDFHAIVDP 139 (233)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH-HT-CCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-TTCTTTCSEECCC
T ss_pred CCHHHHHHHHHHHHHHHHHHH-hh-cCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHH-cCcHhhcCEEeeH
Confidence 355566666666666665432 00 112348999999999 78999999999865 8889999 9999999999888
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ .||+|++++.+++.+++++.+|+||||+.+|+++| ++ +|+.++++.+. +.+. .++ ++++++.|
T Consensus 140 ~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a-~~---aG~~~~~~~~~----~~~~--~ad--~v~~s~~e 207 (233)
T 3nas_A 140 TTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAI-KS---AGMFAVGVGQG----QPML--GAD--LVVRQTSD 207 (233)
T ss_dssp ---------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHH-HH---TTCEEEECC-------------CS--EECSSGGG
T ss_pred hhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHH-HH---cCCEEEEECCc----cccc--cCC--EEeCChHh
Confidence 6 56888999999999999999999999999999999 99 99999998653 3333 445 99999988
Q ss_pred HH
Q 027821 213 FS 214 (218)
Q Consensus 213 l~ 214 (218)
+.
T Consensus 208 l~ 209 (233)
T 3nas_A 208 LT 209 (233)
T ss_dssp CC
T ss_pred CC
Confidence 75
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.80 E-value=5.6e-19 Score=143.83 Aligned_cols=122 Identities=18% Similarity=0.172 Sum_probs=108.4
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
....++||+.++|+ +. ++++|+||+....+...+++ +|+..+|+.+++++ .||+|++++.+++.+++++.+
T Consensus 97 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 174 (234)
T 3u26_A 97 RYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEE 174 (234)
T ss_dssp HHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGG
T ss_pred hhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHH-cCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchh
Confidence 34679999999999 55 99999999999999999999 99999999998875 679999999999999999999
Q ss_pred EEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|++|||+. +|+.+| ++ +|+.+++|.+|....+... .++ ++++++.|+..++
T Consensus 175 ~~~vGD~~~~Di~~a-~~---aG~~~~~v~~~~~~~~~~~--~a~--~~~~~~~el~~~l 226 (234)
T 3u26_A 175 AVYVGDNPVKDCGGS-KN---LGMTSILLDRKGEKREFWD--KCD--FIVSDLREVIKIV 226 (234)
T ss_dssp EEEEESCTTTTHHHH-HT---TTCEEEEECSSSTTGGGGG--GCS--EEESSTHHHHHHH
T ss_pred EEEEcCCcHHHHHHH-HH---cCCEEEEECCCCCcccccc--CCC--EeeCCHHHHHHHH
Confidence 99999997 999999 99 9999999999965544332 445 9999999998876
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=147.77 Aligned_cols=123 Identities=15% Similarity=0.188 Sum_probs=109.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
...++||+.++|+ ++|++++|+||++...++..+++ +|+..+|+.+++++ .||+|++++.+++..++++.+|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 171 (232)
T 1zrn_A 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 171 (232)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-cChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 3578999999999 78999999999999999999999 99999999998875 5799999999999999999999
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+||||+.+|+.+| ++ +|+.+++|.+|....+.+ ...|+++++++.|+...+
T Consensus 172 ~~iGD~~~Di~~a-~~---aG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~el~~~l 222 (232)
T 1zrn_A 172 LFVASNAWDATGA-RY---FGFPTCWINRTGNVFEEM---GQTPDWEVTSLRAVVELF 222 (232)
T ss_dssp EEEESCHHHHHHH-HH---HTCCEEEECTTCCCCCSS---SCCCSEEESSHHHHHTTC
T ss_pred EEEeCCHHHHHHH-HH---cCCEEEEEcCCCCCcccc---CCCCCEEECCHHHHHHHH
Confidence 9999999999999 99 999999999987654332 234559999999998765
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-19 Score=145.10 Aligned_cols=120 Identities=10% Similarity=0.124 Sum_probs=105.5
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCC---hHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~---~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
.++||+.++|+ ++|++++|+||+. ...++..+++ +|+..+|+.+++++ .||+|+++..+++.+++++++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 177 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLER-FGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEE 177 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHh-CCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 46999999999 7899999999999 9999999999 99999999998764 679999999999999999999
Q ss_pred EEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|++|||+. +|+++| ++ +|+.++++.||. ...++. . .|+++++++.|+..++
T Consensus 178 ~~~iGD~~~nDi~~a-~~---aG~~~~~~~~~~-~~~~~~-~--~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 178 SLHIGDTYAEDYQGA-RK---VGMWAVWINQEG-DKVRKL-E--ERGFEIPSIANLKDVI 229 (235)
T ss_dssp EEEEESCTTTTHHHH-HH---TTSEEEEECTTC-CSCEEE-E--TTEEEESSGGGHHHHH
T ss_pred eEEECCChHHHHHHH-HH---CCCEEEEECCCC-CCcccC-C--CCcchHhhHHHHHHHH
Confidence 99999999 999999 99 999999999994 333322 2 2449999999998765
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-19 Score=146.29 Aligned_cols=122 Identities=20% Similarity=0.221 Sum_probs=104.0
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCC---------------hHHHHHHHHHhcCCCCCCceEE-cC----------
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRIY-GL---------- 136 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~---------------~~~~~~iL~~~~gl~~~Fd~I~-g~---------- 136 (218)
....++||+.++|+ ++|++++|+||+. ...++..|++ +|+. |+.++ +.
T Consensus 47 ~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--f~~~~~~~~~~~~~~~~~ 123 (211)
T 2gmw_A 47 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVD--LDGIYYCPHHPQGSVEEF 123 (211)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCBTTCSSGGG
T ss_pred ccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH-cCCc--eEEEEECCcCCCCccccc
Confidence 34689999999999 7899999999999 4788999999 9998 77664 21
Q ss_pred --C---CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceE-EEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 137 --G---TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL-YLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 137 --d---~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~-i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
+ .||+|++++.++++.++++.+|+||||+.+|+.+| ++ +|+++ |+|.||+...+.. ...++ ++++++
T Consensus 124 ~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a-~~---aG~~~~i~v~~g~~~~~~~-~~~~d--~vi~~l 196 (211)
T 2gmw_A 124 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAA-VA---ANVGTKVLVRTGKPITPEA-ENAAD--WVLNSL 196 (211)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHH-HH---TTCSEEEEESSSSCCCHHH-HHHCS--EEESCG
T ss_pred CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHH-HH---CCCceEEEEecCCCccccc-cCCCC--EEeCCH
Confidence 1 67999999999999988999999999999999999 99 99999 9999998765433 34445 999999
Q ss_pred hHHHhhc
Q 027821 211 SDFSRKL 217 (218)
Q Consensus 211 ~~l~~~~ 217 (218)
.||..++
T Consensus 197 ~el~~~l 203 (211)
T 2gmw_A 197 ADLPQAI 203 (211)
T ss_dssp GGHHHHH
T ss_pred HHHHHHH
Confidence 9998765
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-19 Score=144.96 Aligned_cols=118 Identities=12% Similarity=0.112 Sum_probs=103.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.+ |+ ++ ++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..++++++ +.+|+
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~ 147 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLER-NGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF 147 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHH-CCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence 568999999 98 56 99999999999999999999 99999999998875 5799999999988887 78899
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||+.+|+++| ++ +|+.+++|.||....+.+ ...|+++++++.|+..++
T Consensus 148 ~vGD~~~Di~~a-~~---aG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~el~~~l 197 (201)
T 2w43_A 148 LVSSNAFDVIGA-KN---AGMRSIFVNRKNTIVDPI---GGKPDVIVNDFKELYEWI 197 (201)
T ss_dssp EEESCHHHHHHH-HH---TTCEEEEECSSSCCCCTT---SCCCSEEESSHHHHHHHH
T ss_pred EEeCCHHHhHHH-HH---CCCEEEEECCCCCCcccc---CCCCCEEECCHHHHHHHH
Confidence 999999999999 99 999999999987654333 224559999999998765
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.9e-19 Score=142.83 Aligned_cols=132 Identities=13% Similarity=0.082 Sum_probs=109.8
Q ss_pred HHHHHHHHHH-hcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CC
Q 027821 68 LFGKVRDEWM-DKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TG 139 (218)
Q Consensus 68 ~~~~~~~~~~-~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~k 139 (218)
....+.+.+. +.. .....++||+.++|+ ++|++++|+||+....++..+++ +|+..+|+.+++++ .|
T Consensus 85 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~K 159 (231)
T 3kzx_A 85 ATILYENSLEKSQK----SDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHH-KNLTHYFDSIIGSGDTGTIK 159 (231)
T ss_dssp HHHHHHHHHHHCCS----CCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEETSSSCCT
T ss_pred HHHHHHHHHhhhcc----cccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHH-CCchhheeeEEcccccCCCC
Confidence 3445555554 222 456789999999999 78999999999999999999999 99999999998875 57
Q ss_pred ChHHHHHHHHhcCCCCCC-cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 140 PKVEVLKQLQKKPELQGM-TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~-e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|+|+.++.+++.+++++. +++||||+.+|+++| ++ +|+.+|++..+.. . .|++.+.++.||..++
T Consensus 160 p~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a-~~---aG~~~v~~~~~~~-------~--~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 160 PSPEPVLAALTNINIEPSKEVFFIGDSISDIQSA-IE---AGCLPIKYGSTNI-------I--KDILSFKNFYDIRNFI 225 (231)
T ss_dssp TSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHH-HH---TTCEEEEECC--------------CCEEESSHHHHHHHH
T ss_pred CChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHH-HH---CCCeEEEECCCCC-------C--CCceeeCCHHHHHHHH
Confidence 999999999999999998 999999999999999 99 9999999854421 2 3449999999998875
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.78 E-value=7.4e-19 Score=141.60 Aligned_cols=123 Identities=13% Similarity=0.129 Sum_probs=108.1
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
....++||+.++|+ +.|++++|+||.....++..+++ +|+..+|+.+++++ .||+|+.++.+++.+++++.+
T Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~ 169 (226)
T 1te2_A 91 ETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLT 169 (226)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGG
T ss_pred ccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHh-cCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHH
Confidence 34578999999998 78999999999999999999999 99999999998875 568899999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
+++|||+.+|+.+| ++ +|+.+++|.||.+..+.+. ..++ +++.++.|+...
T Consensus 170 ~i~iGD~~nDi~~a-~~---aG~~~~~~~~~~~~~~~~~-~~a~--~v~~~~~el~~~ 220 (226)
T 1te2_A 170 CVALEDSVNGMIAS-KA---ARMRSIVVPAPEAQNDPRF-VLAN--VKLSSLTELTAK 220 (226)
T ss_dssp EEEEESSHHHHHHH-HH---TTCEEEECCCTTTTTCGGG-GGSS--EECSCGGGCCHH
T ss_pred eEEEeCCHHHHHHH-HH---cCCEEEEEcCCCCcccccc-cccC--eEECCHHHHhHH
Confidence 99999999999999 99 9999999999986654432 3445 999999998764
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.78 E-value=7e-19 Score=146.15 Aligned_cols=125 Identities=11% Similarity=0.128 Sum_probs=105.3
Q ss_pred cccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 85 IGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
.....++||+.++|+ ++|++++|+||+....+...+++ +|+..+|+.+++. .||+|+++..+++.+++++.+|++|
T Consensus 108 ~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~-~kp~~~~~~~~~~~l~~~~~~~i~i 185 (251)
T 2pke_A 108 QHPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQ-SGLSDLFPRIEVV-SEKDPQTYARVLSEFDLPAERFVMI 185 (251)
T ss_dssp TCCCCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHH-HSGGGTCCCEEEE-SCCSHHHHHHHHHHHTCCGGGEEEE
T ss_pred hccCCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCcHHhCceeeee-CCCCHHHHHHHHHHhCcCchhEEEE
Confidence 345679999999999 78999999999999999999999 9999999999875 4799999999999999999999999
Q ss_pred cCCh-hhHHHhhccCccCCceEEEEecCCCCHH----HHHhccCCCCe-EEcChhHHHhhc
Q 027821 163 EDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQK----EREEAASIPRI-QLLQLSDFSRKL 217 (218)
Q Consensus 163 GDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~----~l~~a~~~p~~-~~~~~~~l~~~~ 217 (218)
||+. +|+.+| ++ +|+.+++|.||+.... .+... .|++ +++++.||..++
T Consensus 186 GD~~~~Di~~a-~~---aG~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~i~~~~el~~~l 240 (251)
T 2pke_A 186 GNSLRSDVEPV-LA---IGGWGIYTPYAVTWAHEQDHGVAAD--EPRLREVPDPSGWPAAV 240 (251)
T ss_dssp ESCCCCCCHHH-HH---TTCEEEECCCC-------------C--CTTEEECSSGGGHHHHH
T ss_pred CCCchhhHHHH-HH---CCCEEEEECCCCccccccccccccC--CCCeeeeCCHHHHHHHH
Confidence 9999 999999 99 9999999999875322 13333 4558 899999998765
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=142.21 Aligned_cols=123 Identities=14% Similarity=0.108 Sum_probs=108.7
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
....++||+.++|+ +.+++++|+||.+...++.++++ +|+. |+.+++++ .||+|+.++.+++.+++++++|
T Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 189 (254)
T 3umg_A 113 HVLTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKN-AGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEV 189 (254)
T ss_dssp GSCCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHH-HTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGE
T ss_pred hhCcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHh-CCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 45678999999999 44499999999999999999999 9996 89888765 6799999999999999999999
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEe----cCCCCHHHH-HhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGD----WGYNTQKER-EEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~----~G~~~~~~l-~~a~~~p~~~~~~~~~l~~~~ 217 (218)
++|||+.+|+++| ++ +|+.++++. ||+.+.+++ ... .|+++++++.||..++
T Consensus 190 ~~iGD~~~Di~~a-~~---aG~~~~~~~~~~~~g~~~~~~~~~~~--~~d~~~~~~~el~~~l 246 (254)
T 3umg_A 190 MLAAAHNGDLEAA-HA---TGLATAFILRPVEHGPHQTDDLAPTG--SWDISATDITDLAAQL 246 (254)
T ss_dssp EEEESCHHHHHHH-HH---TTCEEEEECCTTTTCTTCCSCSSCSS--CCSEEESSHHHHHHHH
T ss_pred EEEeCChHhHHHH-HH---CCCEEEEEecCCcCCCCccccccccC--CCceEECCHHHHHHHh
Confidence 9999999999999 99 999999999 998777665 333 4559999999998875
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.1e-18 Score=138.93 Aligned_cols=125 Identities=15% Similarity=0.163 Sum_probs=108.1
Q ss_pred ccCCCCCChHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCC-ceEEcCC----C--CChHHHHHHHHhcCCCCCCc
Q 027821 86 GANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGLG----T--GPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 86 ~~~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F-d~I~g~d----~--kpkPe~l~~l~~~~~~~~~e 158 (218)
....++||+.++|+....+++|+||.....++..+++ +|+..+| +.+++++ . ||||+.++.+++.+++++.+
T Consensus 84 ~~~~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~ 162 (229)
T 2fdr_A 84 RDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR 162 (229)
T ss_dssp HHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred cCCccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHh-CChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhH
Confidence 3467899999999922239999999999999999999 9999999 9888764 6 89999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEEecCCCC----HHHHHhccCCCCeEEcChhHHHhhc
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT----QKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~----~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+++|||+.+|+.+| ++ +|+.+|++.+|... .+++++++++ ++++++.|+...+
T Consensus 163 ~i~iGD~~~Di~~a-~~---aG~~~i~~~~~~~~~~~~~~~l~~~~ad--~v~~~~~el~~~l 219 (229)
T 2fdr_A 163 VVVVEDSVHGIHGA-RA---AGMRVIGFTGASHTYPSHADRLTDAGAE--TVISRMQDLPAVI 219 (229)
T ss_dssp EEEEESSHHHHHHH-HH---TTCEEEEECCSTTCCTTHHHHHHHHTCS--EEESCGGGHHHHH
T ss_pred eEEEcCCHHHHHHH-HH---CCCEEEEEecCCccchhhhHHHhhcCCc--eeecCHHHHHHHH
Confidence 99999999999999 99 99999999998763 3446665566 9999999998765
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.1e-19 Score=145.57 Aligned_cols=123 Identities=15% Similarity=0.135 Sum_probs=109.3
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
....++||+.++|+ +.+++++|+||.....+..++++ +|+. |+.+++++ .||||+.++.+++.+++++++|
T Consensus 117 ~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~-~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 193 (254)
T 3umc_A 117 HRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARH-AGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEV 193 (254)
T ss_dssp GSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHH-HTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred hcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHH-cCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHE
Confidence 44678999999999 56699999999999999999999 9996 99998875 6799999999999999999999
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEe----cCCCCHHHH-HhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGD----WGYNTQKER-EEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~----~G~~~~~~l-~~a~~~p~~~~~~~~~l~~~~ 217 (218)
++|||+.+|+++| ++ +|+.++++. ||+...+++ ... .|+++++++.||..+|
T Consensus 194 ~~iGD~~~Di~~a-~~---aG~~~~~~~~~~~~g~~~~~~l~~~~--~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 194 MLCAAHNYDLKAA-RA---LGLKTAFIARPLEYGPGQSQDLAAEQ--DWDLIASDLLDLHRQL 250 (254)
T ss_dssp EEEESCHHHHHHH-HH---TTCEEEEECCTTTTCTTCCSSSSCSS--CCSEEESSHHHHHHHH
T ss_pred EEEcCchHhHHHH-HH---CCCeEEEEecCCccCCCCCcccccCC--CCcEEECCHHHHHHHh
Confidence 9999999999999 99 999999999 998777766 233 4559999999998875
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-18 Score=144.37 Aligned_cols=125 Identities=18% Similarity=0.194 Sum_probs=106.9
Q ss_pred cCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 87 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 87 ~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
...++||+.++|+ + |++++|+||++...++.++++ +|+..+|+.+++++ .||+|++++.+++..++++.+|+
T Consensus 91 ~~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 168 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168 (253)
T ss_dssp SCCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred cCCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHH-CCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 3579999999999 7 999999999999999999999 99999999998875 57999999999999999999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEec------------CCCCHHHH--------HhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDW------------GYNTQKER--------EEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~------------G~~~~~~l--------~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||+.+|+.+| ++ +|+.++++.+ |+.++... ......|+++++++.|+...+
T Consensus 169 ~vGD~~~Di~~a-~~---aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 169 FVSSNGFDVGGA-KN---FGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp EEESCHHHHHHH-HH---HTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred EEeCChhhHHHH-HH---CCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 999999999999 99 9999999988 44222211 112235669999999998765
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-18 Score=136.32 Aligned_cols=118 Identities=19% Similarity=0.162 Sum_probs=105.7
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
.....++||+.++|+ +.|++++|+||....... .+++ +|+..+|+.+++++ .||+|+.+..+++..++++.
T Consensus 81 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~ 158 (207)
T 2go7_A 81 NAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSD 158 (207)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG
T ss_pred cccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHH-cCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcc
Confidence 355678999999999 789999999999999999 9999 99999999998765 56889999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
++++|||+.+|+.+| ++ +|+.++++.+|. + .++ +++.++.|+..+++
T Consensus 159 ~~~~iGD~~nDi~~~-~~---aG~~~i~~~~~~-~-------~a~--~v~~~~~el~~~l~ 205 (207)
T 2go7_A 159 NTYYIGDRTLDVEFA-QN---SGIQSINFLEST-Y-------EGN--HRIQALADISRIFE 205 (207)
T ss_dssp GEEEEESSHHHHHHH-HH---HTCEEEESSCCS-C-------TTE--EECSSTTHHHHHTS
T ss_pred cEEEECCCHHHHHHH-HH---CCCeEEEEecCC-C-------CCC--EEeCCHHHHHHHHh
Confidence 999999999999999 99 999999999987 4 334 99999999988764
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-17 Score=140.41 Aligned_cols=121 Identities=12% Similarity=0.038 Sum_probs=105.0
Q ss_pred cccCCCCCChHHHHH---hC-CCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCC--
Q 027821 85 IGANRFYPGIPDALK---FA-SSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPEL-- 154 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~-g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~-- 154 (218)
.....++||+.++|+ +. |++++|+||+....++..+++ +|+. +|+.+++++ .||+|+.++.+++.+++
T Consensus 110 ~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~-~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~ 187 (275)
T 2qlt_A 110 GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDI-LKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPI 187 (275)
T ss_dssp CTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHH-HTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCC
T ss_pred hcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHH-cCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCc
Confidence 344678999999999 56 899999999999999999999 9997 588888765 57999999999999999
Q ss_pred -----CCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 155 -----QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 155 -----~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
++.+|++|||+.+|+++| ++ ||+.+++|.||++ .+++....++ +++.++.||.
T Consensus 188 ~~~~~~~~~~i~~GDs~nDi~~a-~~---AG~~~i~v~~~~~-~~~~~~~~ad--~v~~~~~el~ 245 (275)
T 2qlt_A 188 NEQDPSKSKVVVFEDAPAGIAAG-KA---AGCKIVGIATTFD-LDFLKEKGCD--IIVKNHESIR 245 (275)
T ss_dssp CSSCGGGSCEEEEESSHHHHHHH-HH---TTCEEEEESSSSC-HHHHTTSSCS--EEESSGGGEE
T ss_pred cccCCCcceEEEEeCCHHHHHHH-HH---cCCEEEEECCCCC-HHHHhhCCCC--EEECChHHcC
Confidence 899999999999999999 99 9999999999965 4455544555 9999999875
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.6e-18 Score=146.10 Aligned_cols=117 Identities=12% Similarity=0.143 Sum_probs=95.8
Q ss_pred ccCCCCCChHHHHHhCCCcEEEEcCCChHHHHHHHHHhc--C---------CCCCCceEEcC---CCCChHHHHHHHHhc
Q 027821 86 GANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELA--G---------VTIPPDRIYGL---GTGPKVEVLKQLQKK 151 (218)
Q Consensus 86 ~~~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~--g---------l~~~Fd~I~g~---d~kpkPe~l~~l~~~ 151 (218)
....+|||+.++|++ |++++|+||+++..++.+|++ + | +..+|+.++.. ..||+|+++..++++
T Consensus 122 ~~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~-~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~ 199 (253)
T 2g80_A 122 IKAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGY-VQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRD 199 (253)
T ss_dssp CCBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHS-BCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHh-hcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHH
Confidence 346899999999988 999999999999999999998 7 5 55555554432 158999999999999
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEec-CCCCHHHHHhccCCCCeEEcChhHH
Q 027821 152 PELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDW-GYNTQKEREEAASIPRIQLLQLSDF 213 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~-G~~~~~~l~~a~~~p~~~~~~~~~l 213 (218)
.++++.+|+|||||..|+++| ++ |||++|+|.| |... +... .|+++++++.||
T Consensus 200 lg~~p~~~l~vgDs~~di~aA-~~---aG~~~i~v~~~~~~~---~~~~--~~~~~i~~l~eL 253 (253)
T 2g80_A 200 IGAKASEVLFLSDNPLELDAA-AG---VGIATGLASRPGNAP---VPDG--QKYQVYKNFETL 253 (253)
T ss_dssp HTCCGGGEEEEESCHHHHHHH-HT---TTCEEEEECCTTSCC---CCSS--CCSCEESCSTTC
T ss_pred cCCCcccEEEEcCCHHHHHHH-HH---cCCEEEEEcCCCCCC---cccc--cCCCccCChhhC
Confidence 999999999999999999999 99 9999999988 4422 1111 255889998774
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.5e-18 Score=143.40 Aligned_cols=125 Identities=12% Similarity=0.058 Sum_probs=106.8
Q ss_pred ccCCCCCChHHHHH---hCCC--cEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--------CCChHHHHHHHHhcC
Q 027821 86 GANRFYPGIPDALK---FASS--RIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKKP 152 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~--~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--------~kpkPe~l~~l~~~~ 152 (218)
....++||+.++|+ ++|+ +++|+||+....++..+++ +|+..+|+.+++++ .||||++++.++..+
T Consensus 139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~l 217 (282)
T 3nuq_A 139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL-LGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKES 217 (282)
T ss_dssp GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHH-HTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHH
T ss_pred hccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHh-CCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHc
Confidence 34679999999999 7899 9999999999999999999 99999999998764 379999999999999
Q ss_pred CCCC-CcEEEEcCChhhHHHhhccCccCCc-eEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 153 ELQG-MTLHFVEDRLATLKNVIKEPELDGW-NLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 153 ~~~~-~e~l~IGDs~~Di~aA~k~~~~AGv-~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
++++ .+|+||||+.+|+.+| ++ +|+ .++++..+...... ...+.++++++++.||.+.+
T Consensus 218 gi~~~~~~i~vGD~~~Di~~a-~~---aG~~~~~~~~~~~~~~~~--~~~~~ad~vi~sl~el~~~l 278 (282)
T 3nuq_A 218 GLARYENAYFIDDSGKNIETG-IK---LGMKTCIHLVENEVNEIL--GQTPEGAIVISDILELPHVV 278 (282)
T ss_dssp TCCCGGGEEEEESCHHHHHHH-HH---HTCSEEEEECSCCC------CCCCTTCEEESSGGGGGGTS
T ss_pred CCCCcccEEEEcCCHHHHHHH-HH---CCCeEEEEEcCCcccccc--ccCCCCCEEeCCHHHHHHHh
Confidence 9998 9999999999999999 99 999 78888777643221 22335559999999999876
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-18 Score=143.54 Aligned_cols=121 Identities=17% Similarity=0.159 Sum_probs=101.1
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
....++||+.++|+ ++| +++|+||+++..++..|++ +|+..+|+.+++. .++||..+..+.. ++++.+|+||
T Consensus 93 ~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~-~gl~~~f~~~~~~-~~~K~~~~~~~~~--~~~~~~~~~v 167 (231)
T 2p11_A 93 FASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIAR-SGLWDEVEGRVLI-YIHKELMLDQVME--CYPARHYVMV 167 (231)
T ss_dssp GGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHH-TTHHHHTTTCEEE-ESSGGGCHHHHHH--HSCCSEEEEE
T ss_pred HhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHH-cCcHHhcCeeEEe-cCChHHHHHHHHh--cCCCceEEEE
Confidence 34679999999999 678 9999999999999999999 9999999876543 2466777777666 4678899999
Q ss_pred cCChh---hHHHhhccCccCCceEEEEecCCC--CHHHHHhcc-CCCCeEEcChhHHHhhc
Q 027821 163 EDRLA---TLKNVIKEPELDGWNLYLGDWGYN--TQKEREEAA-SIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 163 GDs~~---Di~aA~k~~~~AGv~~i~V~~G~~--~~~~l~~a~-~~p~~~~~~~~~l~~~~ 217 (218)
||+.+ |+++| ++ ||+++|+|.||+. ..+.+...+ ++ ++++++.|+..++
T Consensus 168 gDs~~d~~di~~A-~~---aG~~~i~v~~g~~~~~~~~l~~~~~~~--~~i~~~~el~~~l 222 (231)
T 2p11_A 168 DDKLRILAAMKKA-WG---ARLTTVFPRQGHYAFDPKEISSHPPAD--VTVERIGDLVEMD 222 (231)
T ss_dssp CSCHHHHHHHHHH-HG---GGEEEEEECCSSSSSCHHHHHHSCCCS--EEESSGGGGGGCG
T ss_pred cCccchhhhhHHH-HH---cCCeEEEeCCCCCCCcchhccccCCCc--eeecCHHHHHHHH
Confidence 99999 99999 99 9999999999964 555665552 55 9999999998765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-17 Score=132.26 Aligned_cols=137 Identities=16% Similarity=0.186 Sum_probs=108.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
++.+........+++.|.+.. .. .....++||+.++|+ +.|++++|+||+ ..++..+++ +|+..+|+.++++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~-~~l~~~f~~~~~~ 138 (221)
T 2wf7_A 64 VSAEEFKELAKRKNDNYVKMI-QD-VSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLER-MNLTGYFDAIADP 138 (221)
T ss_dssp CCHHHHHHHHHHHHHHHHHHG-GG-CCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHH-TTCGGGCSEECCT
T ss_pred CChHHHHHHHHHHHHHHHHHH-hh-ccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHH-cChHHHcceEecc
Confidence 455555555666666654432 00 113578999999999 789999999998 457788999 9999999999887
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ .||+|+.++.+++.+++++++|++|||+.+|+++| ++ +|+.++++. ..+++. .++ +++.++.|
T Consensus 139 ~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a-~~---aG~~~~~~~----~~~~~~--~a~--~v~~~~~e 206 (221)
T 2wf7_A 139 AEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAI-KD---SGALPIGVG----RPEDLG--DDI--VIVPDTSH 206 (221)
T ss_dssp TTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHH-HH---HTCEEEEES----CHHHHC--SSS--EEESSGGG
T ss_pred ccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHH-HH---CCCEEEEEC----CHHHhc--ccc--chhcCHHh
Confidence 5 56889999999999999999999999999999999 99 999999883 344443 445 99999988
Q ss_pred H
Q 027821 213 F 213 (218)
Q Consensus 213 l 213 (218)
+
T Consensus 207 l 207 (221)
T 2wf7_A 207 Y 207 (221)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.74 E-value=8.7e-18 Score=135.21 Aligned_cols=104 Identities=20% Similarity=0.148 Sum_probs=93.8
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCC-hHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEE
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQ-SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~-~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
.....++||+.++|+ ++|++++|+||++ ...++.++++ +|+..+|+.+++.. +|||+.+..++++.++++.+|+
T Consensus 64 ~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~-~gl~~~f~~~~~~~-~~k~~~~~~~~~~~~~~~~~~~ 141 (187)
T 2wm8_A 64 GQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLEL-FDLFRYFVHREIYP-GSKITHFERLQQKTGIPFSQMI 141 (187)
T ss_dssp CCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHH-TTCTTTEEEEEESS-SCHHHHHHHHHHHHCCCGGGEE
T ss_pred CcccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHH-cCcHhhcceeEEEe-CchHHHHHHHHHHcCCChHHEE
Confidence 345679999999999 7899999999999 7999999999 99999999885544 5899999999999998999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
||||+.+|+++| ++ +|+++|+|.||+...+
T Consensus 142 ~igD~~~Di~~a-~~---aG~~~i~v~~g~~~~~ 171 (187)
T 2wm8_A 142 FFDDERRNIVDV-SK---LGVTCIHIQNGMNLQT 171 (187)
T ss_dssp EEESCHHHHHHH-HT---TTCEEEECSSSCCHHH
T ss_pred EEeCCccChHHH-HH---cCCEEEEECCCCChHH
Confidence 999999999999 99 9999999999987544
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.4e-18 Score=137.74 Aligned_cols=124 Identities=10% Similarity=0.077 Sum_probs=99.2
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHH---HhcCCCCC
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQL---QKKPELQG 156 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l---~~~~~~~~ 156 (218)
....++||+.++|+ +.|++++|+||.+...+...++. +..+||.+++++ .||+|+++..+ +..+++++
T Consensus 96 ~~~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~---l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~ 172 (240)
T 3smv_A 96 KNWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAK---LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEK 172 (240)
T ss_dssp GGCCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTT---TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCG
T ss_pred hcCCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHh---cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCc
Confidence 34689999999999 45899999999999988888875 457999998875 67999988777 78889999
Q ss_pred CcEEEEcCCh-hhHHHhhccCccCCceEEEEe-----cCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 157 MTLHFVEDRL-ATLKNVIKEPELDGWNLYLGD-----WGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 157 ~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~-----~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+|++|||+. +|+++| ++ +|+.++++. |||+..... .....|+++++++.||...+
T Consensus 173 ~~~~~vGD~~~~Di~~a-~~---aG~~~~~~~~~~~~~g~g~~~~~-~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 173 KDILHTAESLYHDHIPA-ND---AGLVSAWIYRRHGKEGYGATHVP-SRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp GGEEEEESCTTTTHHHH-HH---HTCEEEEECTTCC-------CCC-SSCCCCSEEESSHHHHHHHH
T ss_pred hhEEEECCCchhhhHHH-HH---cCCeEEEEcCCCcccCCCCCCCC-cCCCCCCEEeCCHHHHHHHH
Confidence 9999999996 999999 99 999999997 666554321 11235559999999998865
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.6e-18 Score=137.61 Aligned_cols=107 Identities=11% Similarity=0.107 Sum_probs=97.4
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+ ++| +++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..+++..++++.+|+
T Consensus 85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 162 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRT-FGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV 162 (200)
T ss_dssp CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHH-HTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHh-CCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 459999999999 678 9999999999999999999 99999999998765 67999999999999998999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhcc
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAA 200 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~ 200 (218)
||||+.+|+.+| ++ +|+.+++|.||+...+.+..++
T Consensus 163 ~vgD~~~Di~~a-~~---aG~~~~~~~~~~~~~~~l~~~g 198 (200)
T 3cnh_A 163 MVDDRLQNVQAA-RA---VGMHAVQCVDAAQLREELAALG 198 (200)
T ss_dssp EEESCHHHHHHH-HH---TTCEEEECSCHHHHHHHHHHTT
T ss_pred EeCCCHHHHHHH-HH---CCCEEEEECCchhhHHHHHHhc
Confidence 999999999999 99 9999999999987777776543
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.5e-19 Score=132.64 Aligned_cols=106 Identities=13% Similarity=0.054 Sum_probs=95.0
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+ ++|++++|+||++...++..+++ +|+..+|+.+++++ .||+|++++.++++.++++.+++
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 95 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRE-LETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCV 95 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHH-HHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-CChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 458899999999 78999999999999999999999 99999999998764 68999999999999998999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
||||+..|+++| ++ +|+.++++.+|....+.+.+
T Consensus 96 ~vgD~~~di~~a-~~---~G~~~i~~~~~~~~~~~l~~ 129 (137)
T 2pr7_A 96 LVDDSILNVRGA-VE---AGLVGVYYQQFDRAVVEIVG 129 (137)
T ss_dssp EEESCHHHHHHH-HH---HTCEEEECSCHHHHHHHHHH
T ss_pred EEcCCHHHHHHH-HH---CCCEEEEeCChHHHHHHHHH
Confidence 999999999999 99 99999999988655555443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-18 Score=143.08 Aligned_cols=121 Identities=23% Similarity=0.197 Sum_probs=102.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceE-EcC-----------
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRI-YGL----------- 136 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I-~g~----------- 136 (218)
...++||+.++|+ ++|++++|+||++. ..+...|++ +|+. |+.+ .+.
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--~~~~~~~~~~~~g~~~~~~ 130 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGVF--VDMVLACAYHEAGVGPLAI 130 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCCTTCCSTTCC
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHH-cCCc--eeeEEEeecCCCCceeecc
Confidence 4679999999999 78999999999998 789999999 9986 6654 342
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceE-EEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL-YLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~-i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
+ .||+|++++.++++.++++.+++||||+.+|+.+| ++ +|+.+ ++|.||+...+. ... .|+++++++.
T Consensus 131 ~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a-~~---aG~~~~i~v~~g~~~~~~-~~~--~~~~~i~~l~ 203 (218)
T 2o2x_A 131 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAG-KR---AGLAQGWLVDGEAAVQPG-FAI--RPLRDSSELG 203 (218)
T ss_dssp SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHH-HH---TTCSEEEEETCCCEEETT-EEE--EEESSHHHHH
T ss_pred cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHH-HH---CCCCEeEEEecCCCCccc-ccC--CCCEecccHH
Confidence 2 57999999999999999999999999999999999 99 99999 999999865543 222 4558999999
Q ss_pred HHHhhc
Q 027821 212 DFSRKL 217 (218)
Q Consensus 212 ~l~~~~ 217 (218)
||...+
T Consensus 204 el~~~l 209 (218)
T 2o2x_A 204 DLLAAI 209 (218)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988754
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-17 Score=133.38 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=87.1
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCC---------------ChHHHHHHHHHhcCCCCCCceEE-c-----CC---
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTK---------------QSRFADALLRELAGVTIPPDRIY-G-----LG--- 137 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk---------------~~~~~~~iL~~~~gl~~~Fd~I~-g-----~d--- 137 (218)
....+++||+.++|+ ++|++++|+||+ ....++.+|++ +|+. |+.|+ + .+
T Consensus 38 ~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~v~~s~~~~~~~~~~ 114 (176)
T 2fpr_A 38 FDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQ--FDEVLICPHLPADECDC 114 (176)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHH-TTCC--EEEEEEECCCGGGCCSS
T ss_pred HHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHH-cCCC--eeEEEEcCCCCcccccc
Confidence 445789999999999 789999999998 67889999999 9998 88885 4 23
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKE 195 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~ 195 (218)
.||+|++++.+++++++++.+++||||+..|+++| ++ +|+++|+|.+|-..-++
T Consensus 115 ~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A-~~---aG~~~i~v~~~~~~~~~ 168 (176)
T 2fpr_A 115 RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLA-EN---MGINGLRYDRETLNWPM 168 (176)
T ss_dssp STTSCGGGGGGC----CCGGGCEEEESSHHHHHHH-HH---HTSEEEECBTTTBCHHH
T ss_pred cCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHH-HH---cCCeEEEEcCCcccHHH
Confidence 67999999999999988999999999999999999 99 99999999988654443
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.68 E-value=5.9e-17 Score=132.32 Aligned_cols=119 Identities=12% Similarity=0.202 Sum_probs=94.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC--CCceEE---------cCC-------CCChHHHHH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI--PPDRIY---------GLG-------TGPKVEVLK 146 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~--~Fd~I~---------g~d-------~kpkPe~l~ 146 (218)
.+++||+.++|+ ++|++++|+||++...++.++++ +|+.. +|+.++ |.+ .++||++++
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 163 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK 163 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH-cCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHH
Confidence 579999999999 78999999999999999999999 99984 787653 333 248999999
Q ss_pred HHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 147 QLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
.++.+.++ .+|+||||+.+|+.+| ++ +|+ +|++ |.....+.....++ ++++++.|+..+++
T Consensus 164 ~~~~~~~~--~~~~~vGDs~~Di~~a-~~---ag~-~i~~--~~~~~~~~~~~~~~--~~~~~~~el~~~l~ 224 (225)
T 1nnl_A 164 LLKEKFHF--KKIIMIGDGATDMEAC-PP---ADA-FIGF--GGNVIRQQVKDNAK--WYITDFVELLGELE 224 (225)
T ss_dssp HHHHHHCC--SCEEEEESSHHHHTTT-TT---SSE-EEEE--CSSCCCHHHHHHCS--EEESCGGGGCC---
T ss_pred HHHHHcCC--CcEEEEeCcHHhHHHH-Hh---CCe-EEEe--cCccccHHHHhcCC--eeecCHHHHHHHHh
Confidence 98888875 6899999999999999 99 999 7666 44332223333445 99999999988764
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.9e-18 Score=137.72 Aligned_cols=114 Identities=13% Similarity=0.032 Sum_probs=91.6
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
...++||+.++|+ ++|++++|+||++. .++..|++ +|+..+||.+++++ .||+|+++..++++.++++
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~--- 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEK-FDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA--- 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHH-HTCGGGCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHh-cCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence 4579999999999 67999999999987 58899999 99999999998876 5688889999998888766
Q ss_pred EEEcCChh-hHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDRLA-TLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs~~-Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+||||+.+ |+.+| ++ +|+++++|.++... .+ . + ++++++.|+..++
T Consensus 168 ~~vgD~~~~Di~~a-~~---aG~~~i~v~~~~~~-~~---~--~--~~i~~l~el~~~l 214 (220)
T 2zg6_A 168 VHVGDIYELDYIGA-KR---SYVDPILLDRYDFY-PD---V--R--DRVKNLREALQKI 214 (220)
T ss_dssp EEEESSCCCCCCCS-SS---CSEEEEEBCTTSCC-TT---C--C--SCBSSHHHHHHHH
T ss_pred EEEcCCchHhHHHH-HH---CCCeEEEECCCCCC-CC---c--c--eEECCHHHHHHHH
Confidence 99999999 99999 99 99999999875222 11 1 3 6789999998765
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.65 E-value=2.2e-16 Score=124.87 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=87.5
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
.++||+.++|+ ++|++++|+||++. .++..+++ +|+..+|+.+++++ .||+|+.++.+++..+++ +|++
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~ 157 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV 157 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHH-cCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence 39999999999 78999999999875 68899999 99999999998875 579999999999999876 9999
Q ss_pred EcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 162 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
|||+.+|+++| ++ +|+.++++.||....+
T Consensus 158 iGD~~~Di~~a-~~---aG~~~~~~~~~~~~~~ 186 (190)
T 2fi1_A 158 IGDRPIDIEAG-QA---AGLDTHLFTSIVNLRQ 186 (190)
T ss_dssp EESSHHHHHHH-HH---TTCEEEECSCHHHHHH
T ss_pred EcCCHHHHHHH-HH---cCCeEEEECCCCChhh
Confidence 99999999999 99 9999999998754433
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.64 E-value=5.9e-18 Score=140.69 Aligned_cols=123 Identities=10% Similarity=0.053 Sum_probs=102.4
Q ss_pred CCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc---eEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 89 RFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPD---RIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 89 ~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd---~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
.+|||+.++|+ ++|+++ |+||+........+.. .|+..+|+ .+++++ .||+|++++.++++.++++.+|
T Consensus 122 ~~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 199 (259)
T 2ho4_A 122 FHYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLA-LGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEA 199 (259)
T ss_dssp CBHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEE-ECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGE
T ss_pred CCHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcc-cCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHE
Confidence 37899999998 789999 9999987766666777 88888887 556665 6799999999999999999999
Q ss_pred EEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+||||+. +|+.+| ++ ||+++|+|.||.....+.......|+++++++.|+..++
T Consensus 200 ~~iGD~~~~Di~~a-~~---aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 200 VMIGDDCRDDVDGA-QN---IGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp EEEESCTTTTHHHH-HH---TTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred EEECCCcHHHHHHH-HH---CCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 9999998 999999 99 999999999996443333222345669999999998875
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-16 Score=127.38 Aligned_cols=107 Identities=13% Similarity=0.194 Sum_probs=95.1
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHh-----cCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCC
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLREL-----AGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQG 156 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~-----~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~ 156 (218)
..++||+.++|+ ++|++++|+||+....++.+++++ +|+..+|+.+++++ .||+|++++.+++..++++
T Consensus 88 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 167 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKP 167 (211)
T ss_dssp EEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCG
T ss_pred cccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCCh
Confidence 468999999999 449999999999999998888852 38999999998764 6799999999999999999
Q ss_pred CcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 157 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
.+|+||||+.+|+.+| ++ +|+.++++.+|....+.+..
T Consensus 168 ~~~~~igD~~~Di~~a-~~---aG~~~~~~~~~~~~~~~l~~ 205 (211)
T 2i6x_A 168 EETLFIDDGPANVATA-ER---LGFHTYCPDNGENWIPAITR 205 (211)
T ss_dssp GGEEEECSCHHHHHHH-HH---TTCEEECCCTTCCCHHHHHH
T ss_pred HHeEEeCCCHHHHHHH-HH---cCCEEEEECCHHHHHHHHHH
Confidence 9999999999999999 99 99999999999877776654
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-16 Score=131.19 Aligned_cols=103 Identities=16% Similarity=0.107 Sum_probs=90.4
Q ss_pred CCCCChHHHHH--hCCCcEEEEcCCChHHHHHHH------HHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCC
Q 027821 89 RFYPGIPDALK--FASSRIYIVTTKQSRFADALL------RELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQG 156 (218)
Q Consensus 89 ~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL------~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~ 156 (218)
.++||+.++|+ +..++++|+||.....++.++ +. +|+..+||.+++++ .||+|++++.+++..++++
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRT-FKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTT-BCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhcc-CCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 47899999999 334999999999999998666 77 89999999998875 6799999999999999999
Q ss_pred CcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHH
Q 027821 157 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKER 196 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l 196 (218)
.+|+||||+.+|+++| ++ +|+.+++|.+|....+.+
T Consensus 191 ~~~~~vGD~~~Di~~a-~~---aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 191 KETFFIDDSEINCKVA-QE---LGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp GGEEEECSCHHHHHHH-HH---TTCEEECCCTTCCGGGGG
T ss_pred HHeEEECCCHHHHHHH-HH---cCCEEEEECCHHHHHHHh
Confidence 9999999999999999 99 999999999886554443
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.2e-18 Score=146.81 Aligned_cols=119 Identities=14% Similarity=0.092 Sum_probs=98.1
Q ss_pred CCCChHHHHHhCCCcEEEEcCCChHHH--H--HHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcC----CCCCC
Q 027821 90 FYPGIPDALKFASSRIYIVTTKQSRFA--D--ALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKP----ELQGM 157 (218)
Q Consensus 90 l~pGv~e~L~~~g~~laIvTnk~~~~~--~--~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~----~~~~~ 157 (218)
.|+++.+.|+++|++ +|+||++.... . .++++ .|+..+|+.+++++ .||+|++++.+++.. ++++.
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~ 226 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAI-GGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKR 226 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECH-HHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccC-ChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcc
Confidence 455555555588999 99999987655 3 23466 78888999998876 689999999999888 89999
Q ss_pred cEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHH----hccCCCCeEEcChhHHH
Q 027821 158 TLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKERE----EAASIPRIQLLQLSDFS 214 (218)
Q Consensus 158 e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~----~a~~~p~~~~~~~~~l~ 214 (218)
+|+||||+. +|+.+| ++ +|+++|+|.||+...+++. .....|+++++++.||+
T Consensus 227 ~~~~VGD~~~~Di~~A-~~---aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~ell 284 (284)
T 2hx1_A 227 EILMVGDTLHTDILGG-NK---FGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIEL 284 (284)
T ss_dssp GEEEEESCTTTHHHHH-HH---HTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCCC
T ss_pred eEEEECCCcHHHHHHH-HH---cCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhhC
Confidence 999999995 999999 99 9999999999998877765 43346679999998863
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-17 Score=141.23 Aligned_cols=124 Identities=15% Similarity=0.180 Sum_probs=100.5
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHH--HHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFA--DALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~--~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
..+|||+.++|+ ++|+++ |+||++.... ..++....++..+|+.+++++ .||+|++++.+++. +++.++
T Consensus 129 ~~~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~ 205 (263)
T 1zjj_A 129 DLTYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEEL 205 (263)
T ss_dssp TCBHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEE
T ss_pred CCCHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccE
Confidence 468999999998 889998 9999987543 222221024555788888775 68999999888877 689999
Q ss_pred EEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 160 HFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 160 l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
+||||+. +|+.+| ++ +|+.+++|.||....+++......|+++++++.|+.++|+
T Consensus 206 ~~VGD~~~~Di~~A-~~---aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 206 WMVGDRLDTDIAFA-KK---FGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp EEEESCTTTHHHHH-HH---TTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred EEECCChHHHHHHH-HH---cCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence 9999995 999999 99 9999999999998888776554467799999999999874
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-17 Score=143.39 Aligned_cols=125 Identities=14% Similarity=0.180 Sum_probs=102.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHH--H-HHHHHhcC-CCCCCceEEcCC----CCChHHHHHHHHhcCCCCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFA--D-ALLRELAG-VTIPPDRIYGLG----TGPKVEVLKQLQKKPELQG 156 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~--~-~iL~~~~g-l~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~ 156 (218)
..+||++.++|+ +.|+ ++|+||++.... . ..+.. +| +..+|+.+++.+ .||+|++++.+++.+++++
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~ 232 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPG-TGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDP 232 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEEC-HHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCG
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCC-CcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCCh
Confidence 467899999998 5688 999999986543 2 33444 45 566788777765 6799999999999999999
Q ss_pred CcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHh------ccCCCCeEEcChhHHHhhcC
Q 027821 157 MTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREE------AASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 157 ~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~------a~~~p~~~~~~~~~l~~~~~ 218 (218)
++++||||+. +|+++| ++ +|+.+++|.||+...+.+.. ....|+++++++.||..+++
T Consensus 233 ~e~l~vGD~~~~Di~~a-~~---aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 233 ARTLMVGDRLETDILFG-HR---CGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp GGEEEEESCTTTHHHHH-HH---HTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred HHEEEECCCchHHHHHH-HH---CCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 9999999996 999999 99 99999999999988777654 22356699999999998875
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=9.2e-16 Score=123.72 Aligned_cols=116 Identities=10% Similarity=0.014 Sum_probs=96.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc-----------CC---CCChHHHHHHHHh
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG-----------LG---TGPKVEVLKQLQK 150 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g-----------~d---~kpkPe~l~~l~~ 150 (218)
..++||+.++|+ ++|++++|+||.....++..+++ +|+..+|+.+++ .+ .+|||++++.+++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~ 152 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDL-LHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQR 152 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH-cCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHH
Confidence 579999999999 78999999999999999999999 999999998852 22 4799999999999
Q ss_pred cCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc--ChhHHHhh
Q 027821 151 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRK 216 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~--~~~~l~~~ 216 (218)
..++++.+|+||||+.+|+.+| ++ +|+.++. +..+.++. .++ +++. ++.++..|
T Consensus 153 ~~g~~~~~~i~vGDs~~Di~~a-~~---aG~~~~~-----~~~~~l~~-~ad--~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 153 LLNISKTNTLVVGDGANDLSMF-KH---AHIKIAF-----NAKEVLKQ-HAT--HCINEPDLALIKPL 208 (217)
T ss_dssp HHTCCSTTEEEEECSGGGHHHH-TT---CSEEEEE-----SCCHHHHT-TCS--EEECSSBGGGGTTC
T ss_pred HcCCCHhHEEEEeCCHHHHHHH-HH---CCCeEEE-----CccHHHHH-hcc--eeecccCHHHHHHH
Confidence 9999999999999999999999 99 9997642 33445543 445 8875 56666655
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.61 E-value=5.5e-16 Score=133.25 Aligned_cols=95 Identities=18% Similarity=0.123 Sum_probs=76.8
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHH---HHHHHHHh-------cCCCCCCceEEcCC---CCChHHHHHHHHhcC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRF---ADALLREL-------AGVTIPPDRIYGLG---TGPKVEVLKQLQKKP 152 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~---~~~iL~~~-------~gl~~~Fd~I~g~d---~kpkPe~l~~l~~~~ 152 (218)
.+|||+.++|+ ++|++++||||+++.. +...|++. +|+ +|+.+++.+ .||+|+++..++.+.
T Consensus 188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~~~ 265 (301)
T 1ltq_A 188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFWKH 265 (301)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCCCcHHHHHHHHHHHHH
Confidence 46999999999 8999999999999654 34455431 377 689888754 579999988777766
Q ss_pred CCCCCc-EEEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 153 ELQGMT-LHFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 153 ~~~~~e-~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
...+.+ ++||||+.+|+++| ++ ||+++|+|+||
T Consensus 266 ~~~~~~~~~~vgD~~~di~~a-~~---aG~~~~~v~~G 299 (301)
T 1ltq_A 266 IAPHFDVKLAIDDRTQVVEMW-RR---IGVECWQVASG 299 (301)
T ss_dssp TTTTCEEEEEEECCHHHHHHH-HH---TTCCEEECSCC
T ss_pred hccccceEEEeCCcHHHHHHH-HH---cCCeEEEecCC
Confidence 544434 69999999999999 99 99999999999
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.61 E-value=7.8e-18 Score=141.39 Aligned_cols=123 Identities=12% Similarity=0.111 Sum_probs=100.2
Q ss_pred cCCCCCChHHHHH--hCCCcEEEEcCCChHH--HHH-HHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 87 ANRFYPGIPDALK--FASSRIYIVTTKQSRF--ADA-LLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 87 ~~~l~pGv~e~L~--~~g~~laIvTnk~~~~--~~~-iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
...+|||+.++|+ ++|+++ |+||++... ... +++. .++..+|+.+++++ .||+|++++.+++..++++.
T Consensus 124 ~~~~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 201 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGA-GSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKE 201 (264)
T ss_dssp TTCCHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECH-HHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGG
T ss_pred CCcCHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCC-cHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHH
Confidence 3568999999999 889998 999988743 222 2343 45666788888875 68999999999999999999
Q ss_pred cEEEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 158 TLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 158 e~l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
+|+||||+ .+|+.+| ++ +|+.+|+|.||+...+++......|+++++++.|+..
T Consensus 202 ~~~~vGD~~~~Di~~a-~~---aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~ 256 (264)
T 1yv9_A 202 QVIMVGDNYETDIQSG-IQ---NGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTF 256 (264)
T ss_dssp GEEEEESCTTTHHHHH-HH---HTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCCT
T ss_pred HEEEECCCcHHHHHHH-HH---cCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHhh
Confidence 99999999 5999999 99 9999999999998776665543356699999998753
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.60 E-value=5.9e-16 Score=124.70 Aligned_cols=118 Identities=9% Similarity=0.045 Sum_probs=94.5
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC-ceEEcC-CC------CChHHHHHHHHhcCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGL-GT------GPKVEVLKQLQKKPELQ 155 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F-d~I~g~-d~------kpkPe~l~~l~~~~~~~ 155 (218)
...++||+.++|+ ++ ++++|+||+....++.++++ +|+..+| +.++++ +. +|+|+++..+++..+.+
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~ 144 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHH-cCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhc
Confidence 4578999999999 55 99999999999999999999 9999999 556553 42 38998887777666667
Q ss_pred CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeE-EcChhHHHhhc
Q 027821 156 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQ-LLQLSDFSRKL 217 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~-~~~~~~l~~~~ 217 (218)
+.+|+||||+.+|+.+| ++ +|+.++ ++ ..+.+....++ ++ ++++.++...+
T Consensus 145 ~~~~~~iGD~~~Di~~a-~~---aG~~~~---~~--~~~~~~~~~~~--~~~~~~~~~l~~~l 196 (206)
T 1rku_A 145 YYRVIAAGDSYNDTTML-SE---AHAGIL---FH--APENVIREFPQ--FPAVHTYEDLKREF 196 (206)
T ss_dssp TCEEEEEECSSTTHHHH-HH---SSEEEE---ES--CCHHHHHHCTT--SCEECSHHHHHHHH
T ss_pred CCEEEEEeCChhhHHHH-Hh---cCccEE---EC--CcHHHHHHHhh--hccccchHHHHHHH
Confidence 78999999999999999 99 999755 22 33455555444 75 99999987764
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=6.9e-17 Score=129.37 Aligned_cols=106 Identities=10% Similarity=0.126 Sum_probs=90.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+ ++|++++|+||++...++.++++++|+..+|+.+++++ .||+|+++..+++..++++.+|+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 169 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 468999999999 68999999999998877666654247788899998865 67999999999999999999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
||||+.+|+.+| ++ +|+.++++.+|....+.+.
T Consensus 170 ~vgD~~~Di~~a-~~---aG~~~~~~~~~~~~~~~l~ 202 (206)
T 2b0c_A 170 FFDDNADNIEGA-NQ---LGITSILVKDKTTIPDYFA 202 (206)
T ss_dssp EEESCHHHHHHH-HT---TTCEEEECCSTTHHHHHHH
T ss_pred EeCCCHHHHHHH-HH---cCCeEEEecCCchHHHHHH
Confidence 999999999999 99 9999999999865444443
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.6e-15 Score=120.07 Aligned_cols=122 Identities=11% Similarity=0.113 Sum_probs=96.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC--CCCc--eEEcCC--------CCChHHH-HHHHHhc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT--IPPD--RIYGLG--------TGPKVEV-LKQLQKK 151 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~--~~Fd--~I~g~d--------~kpkPe~-l~~l~~~ 151 (218)
..++||+.++|+ ++|++++|+||+....++..+++ +|+. .+|. .+++.+ .+|+|+. +..+.+.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADY-LNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-cCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 358999999999 88999999999999999999999 9994 3554 233333 3355543 4555555
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 152 PELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.++++.++++|||+.+|+.++ + +|+.+++|.||.+...+.....++ +++.++.|+..++
T Consensus 160 ~~~~~~~~~~vGD~~~Di~~~-~----~G~~~~~v~~~~~~~~~~~~~~ad--~v~~~~~el~~~l 218 (219)
T 3kd3_A 160 KGLIDGEVIAIGDGYTDYQLY-E----KGYATKFIAYMEHIEREKVINLSK--YVARNVAELASLI 218 (219)
T ss_dssp GGGCCSEEEEEESSHHHHHHH-H----HTSCSEEEEECSSCCCHHHHHHCS--EEESSHHHHHHHH
T ss_pred hCCCCCCEEEEECCHhHHHHH-h----CCCCcEEEeccCccccHHHHhhcc--eeeCCHHHHHHhh
Confidence 577889999999999999998 7 799999999998776555455556 9999999998875
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6e-17 Score=136.24 Aligned_cols=125 Identities=17% Similarity=0.159 Sum_probs=100.7
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHH---HHHHhcCCCCCCceEEcCC-----CCChHHHHHHHHhcCCCCCC
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADA---LLRELAGVTIPPDRIYGLG-----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~---iL~~~~gl~~~Fd~I~g~d-----~kpkPe~l~~l~~~~~~~~~ 157 (218)
..+|||+.++|+ +.|+++ |+||........ .++. .++..+|+.+++.+ .||||++++.+++.++++++
T Consensus 136 ~~~~~~~~~~l~~l~~~~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~ 213 (271)
T 1vjr_A 136 TLTYERLKKACILLRKGKFY-IATHPDINCPSKEGPVPDA-GSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKE 213 (271)
T ss_dssp TCCHHHHHHHHHHHTTTCEE-EESCCCSEECCTTSCEECH-HHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGG
T ss_pred CcCHHHHHHHHHHHHCCCeE-EEECCCccccCCCCccccc-cHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCc
Confidence 457889999888 789998 999987542221 2333 44555666665543 47999999999999999999
Q ss_pred cEEEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 158 TLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 158 e~l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
++++|||+ .+|+++| ++ +|+.+++|.||+...+.+......|+++++++.|+..++|
T Consensus 214 e~i~iGD~~~nDi~~a-~~---aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 271 (271)
T 1vjr_A 214 RMAMVGDRLYTDVKLG-KN---AGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAVQ 271 (271)
T ss_dssp GEEEEESCHHHHHHHH-HH---HTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred eEEEECCCcHHHHHHH-HH---cCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 99999999 5999999 99 9999999999999888777654466799999999998875
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.8e-16 Score=142.89 Aligned_cols=111 Identities=19% Similarity=0.121 Sum_probs=91.8
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCC--ChHHHHHHHHHhc--CCCCCCceEEcCC----CCChHHHHHHHHhcCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTK--QSRFADALLRELA--GVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQ 155 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk--~~~~~~~iL~~~~--gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~ 155 (218)
...++||+.++|+ ++|++++|+||+ ........+.. . |+..+||.|++++ .||+|++++.++++.+++
T Consensus 98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~ 176 (555)
T 3i28_A 98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQ-LMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS 176 (555)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHH-HHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHH-HhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCC
Confidence 4679999999999 889999999998 22222233333 3 7888999998875 689999999999999999
Q ss_pred CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCC
Q 027821 156 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASI 202 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~ 202 (218)
+++|+||||+.+|+++| ++ +|+.++++.++....+.+..+.+.
T Consensus 177 p~~~~~v~D~~~di~~a-~~---aG~~~~~~~~~~~~~~~l~~~~~~ 219 (555)
T 3i28_A 177 PSEVVFLDDIGANLKPA-RD---LGMVTILVQDTDTALKELEKVTGI 219 (555)
T ss_dssp GGGEEEEESCHHHHHHH-HH---HTCEEEECSSHHHHHHHHHHHHCS
T ss_pred hhHEEEECCcHHHHHHH-HH---cCCEEEEECCCccHHHHHHhhhce
Confidence 99999999999999999 99 999999999887777776665433
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.57 E-value=5.7e-17 Score=132.39 Aligned_cols=124 Identities=14% Similarity=0.135 Sum_probs=100.1
Q ss_pred ccCCCCCChHHHHH---hCCCcEE---------------------------------EEcCCChHHHHHHHHHhcC-CCC
Q 027821 86 GANRFYPGIPDALK---FASSRIY---------------------------------IVTTKQSRFADALLRELAG-VTI 128 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~la---------------------------------IvTnk~~~~~~~iL~~~~g-l~~ 128 (218)
....++||+.++|+ +.|++++ |+||.+ ......++. +| +..
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~-~~~~~~ 161 (250)
T 2c4n_A 84 GKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPA-CGALCA 161 (250)
T ss_dssp CCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBC-HHHHHH
T ss_pred CCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeec-chHHHH
Confidence 34568899999999 7899999 999987 444444555 55 555
Q ss_pred CCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCC
Q 027821 129 PPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIP 203 (218)
Q Consensus 129 ~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p 203 (218)
+|+.+.+.+ .||||+.++.+++.+++++++|++|||+ .+|+++| ++ +|+.+++|.||.+..+++......|
T Consensus 162 ~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~-~~---aG~~~~~v~~g~~~~~~~~~~~~~~ 237 (250)
T 2c4n_A 162 GIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAG-FQ---AGLETILVLSGVSSLDDIDSMPFRP 237 (250)
T ss_dssp HHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHH-HH---TTCEEEEESSSSCCGGGGSSCSSCC
T ss_pred HHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHH-HH---cCCeEEEECCCCCChhhhhhcCCCC
Confidence 667666655 5799999999999999999999999999 6999999 99 9999999999998876665322355
Q ss_pred CeEEcChhHHHh
Q 027821 204 RIQLLQLSDFSR 215 (218)
Q Consensus 204 ~~~~~~~~~l~~ 215 (218)
+++++++.||..
T Consensus 238 ~~v~~~~~el~~ 249 (250)
T 2c4n_A 238 SWIYPSVAEIDV 249 (250)
T ss_dssp SEEESSGGGCCC
T ss_pred CEEECCHHHhhc
Confidence 699999999753
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.56 E-value=2e-15 Score=132.32 Aligned_cols=122 Identities=13% Similarity=0.143 Sum_probs=98.5
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC-----------C---CCChHHHHHHH
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-----------G---TGPKVEVLKQL 148 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~-----------d---~kpkPe~l~~l 148 (218)
....++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.+++. + .||||+++..+
T Consensus 176 ~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~-lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~ 254 (317)
T 4eze_A 176 DRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKAR-YQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDL 254 (317)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred hCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHH-cCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHH
Confidence 34679999999999 89999999999999999999999 9999999977531 1 36899999999
Q ss_pred HhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 149 QKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
+++.++++.+++||||+.+|+.+| ++ ||+.+ .|+ ..+.....+ +..+...++.+++.+++
T Consensus 255 ~~~lgv~~~~~i~VGDs~~Di~aa-~~---AG~~v---a~~-~~~~~~~~a--~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 255 AARLNIATENIIACGDGANDLPML-EH---AGTGI---AWK-AKPVVREKI--HHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHH-HH---SSEEE---EES-CCHHHHHHC--CEEESSSCGGGGGGGTC
T ss_pred HHHcCCCcceEEEEeCCHHHHHHH-HH---CCCeE---EeC-CCHHHHHhc--CeeeCCCCHHHHHHHHH
Confidence 999999999999999999999999 99 99744 343 344433333 42244668888887763
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-15 Score=125.01 Aligned_cols=117 Identities=12% Similarity=0.161 Sum_probs=91.6
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC------------CCChHHH-HH-----
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG------------TGPKVEV-LK----- 146 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d------------~kpkPe~-l~----- 146 (218)
.+++||+.++|+ ++|++++|+||++...++.+++ |+..+ +.|++++ .||+|++ +.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~---~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~ 151 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE---GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC 151 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT---TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh---cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCc
Confidence 579999999999 7899999999999998888887 66665 8888765 2455563 33
Q ss_pred --HHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 147 --QLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 147 --~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+++++++++.+++||||+.+|+.+| ++ +|+.++ .||+ .+.+...+ .|+++++++.|+..++
T Consensus 152 K~~~~~~~~~~~~~~~~vGDs~~Di~~a-~~---aG~~~~--~~~~--~~~~~~~~-~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 152 KPSVIHELSEPNQYIIMIGDSVTDVEAA-KL---SDLCFA--RDYL--LNECREQN-LNHLPYQDFYEIRKEI 215 (236)
T ss_dssp HHHHHHHHCCTTCEEEEEECCGGGHHHH-HT---CSEEEE--CHHH--HHHHHHTT-CCEECCSSHHHHHHHH
T ss_pred HHHHHHHHhccCCeEEEEeCChHHHHHH-Hh---CCeeee--chHH--HHHHHHCC-CCeeecCCHHHHHHHH
Confidence 66677777889999999999999999 99 999885 3553 34444442 2449999999998765
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.3e-15 Score=127.99 Aligned_cols=114 Identities=12% Similarity=0.083 Sum_probs=89.4
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEE
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
....+++||+.++|+ ++|++++|+||+++..++.++++ +|+..+|+.++ |+....+.+.++.++.+|+|
T Consensus 132 ~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~-------p~~k~~~~~~l~~~~~~~~~ 203 (263)
T 2yj3_A 132 NISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKE-LNIQEYYSNLS-------PEDKVRIIEKLKQNGNKVLM 203 (263)
Confidence 445689999999999 78999999999999999999999 99999999776 23333344444445567899
Q ss_pred EcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHhhc
Q 027821 162 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 217 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~~~ 217 (218)
|||+.+|+.+| ++ || ++|.||+++. .....+| +++ +++.++...+
T Consensus 204 VGD~~~D~~aa-~~---Ag---v~va~g~~~~--~~~~~ad--~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 204 IGDGVNDAAAL-AL---AD---VSVAMGNGVD--ISKNVAD--IILVSNDIGTLLGLI 250 (263)
Confidence 99999999999 99 88 4688886543 2233445 888 9999987654
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=4.2e-14 Score=112.80 Aligned_cols=118 Identities=13% Similarity=0.102 Sum_probs=95.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC-C-------------CCChHHHHHHHHh
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-G-------------TGPKVEVLKQLQK 150 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~-d-------------~kpkPe~l~~l~~ 150 (218)
..++||+.++|+ ++|++++|+||+....++..+++ +|+..+|+.++.. + ..+||+.+..+++
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 467899999999 88999999999999999999999 9998777654311 1 2478999999999
Q ss_pred cCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC--hhHHHhhcC
Q 027821 151 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ--LSDFSRKLK 218 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~--~~~l~~~~~ 218 (218)
.+++++.+|++|||+.+|+.+| ++ ||+.+ + ++ .. +.++ ..++ +++.+ +.|+..+++
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~~-~~---ag~~~-~--~~-~~-~~~~-~~a~--~v~~~~~~~~l~~~l~ 211 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISMF-KK---AGLKI-A--FC-AK-PILK-EKAD--ICIEKRDLREILKYIK 211 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHH-HH---CSEEE-E--ES-CC-HHHH-TTCS--EEECSSCGGGGGGGCC
T ss_pred HcCCCHHHEEEEecChhHHHHH-HH---CCCEE-E--EC-CC-HHHH-hhcc--eeecchhHHHHHHhhC
Confidence 8998999999999999999999 99 99853 3 33 23 3443 3445 99998 999988775
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-13 Score=107.93 Aligned_cols=105 Identities=14% Similarity=0.139 Sum_probs=84.2
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChh
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLA 167 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~ 167 (218)
.|+..++|+ ++|++++|+||++...++.++++ +|+..+|+. .||||+.++.+++..++++.+++||||+.+
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~~-----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 111 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKE-LGVEEIYTG-----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVV 111 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHH-TTCCEEEEC-----C--CHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCHhhccC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 455678888 78999999999999999999999 999877753 579999999999999889999999999999
Q ss_pred hHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 168 TLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 168 Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
|+.+| ++ +|+.++ +.++ .. .+.. .++ ++++++.+
T Consensus 112 Di~~a-~~---ag~~~~-~~~~--~~-~~~~-~a~--~v~~~~~~ 145 (162)
T 2p9j_A 112 DIEVM-KK---VGFPVA-VRNA--VE-EVRK-VAV--YITQRNGG 145 (162)
T ss_dssp GHHHH-HH---SSEEEE-CTTS--CH-HHHH-HCS--EECSSCSS
T ss_pred HHHHH-HH---CCCeEE-ecCc--cH-HHHh-hCC--EEecCCCC
Confidence 99999 99 999865 3333 33 3333 345 88888653
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2e-13 Score=106.88 Aligned_cols=106 Identities=14% Similarity=0.055 Sum_probs=85.3
Q ss_pred HHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhc
Q 027821 95 PDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k 174 (218)
.+.|+++|++++|+||++...++.++++ +|+..+|+.+ ||||+.++.++++.++++.+++||||+.+|+.+| +
T Consensus 40 l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~-~ 112 (164)
T 3e8m_A 40 IFWAHNKGIPVGILTGEKTEIVRRRAEK-LKVDYLFQGV-----VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLL-K 112 (164)
T ss_dssp HHHHHHTTCCEEEECSSCCHHHHHHHHH-TTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHH-T
T ss_pred HHHHHHCCCEEEEEeCCChHHHHHHHHH-cCCCEeeccc-----CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH-H
Confidence 3444489999999999999999999999 9998877653 8999999999999998999999999999999999 9
Q ss_pred cCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC------hhHHHhhc
Q 027821 175 EPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ------LSDFSRKL 217 (218)
Q Consensus 175 ~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~------~~~l~~~~ 217 (218)
+ +|+.++. +...+ .+.+ .++ +++.+ +.++.+.+
T Consensus 113 ~---ag~~~~~---~~~~~-~~~~-~ad--~v~~~~~~~g~~~e~~~~l 151 (164)
T 3e8m_A 113 R---VGIAGVP---ASAPF-YIRR-LST--IFLEKRGGEGVFREFVEKV 151 (164)
T ss_dssp T---SSEEECC---TTSCH-HHHT-TCS--SCCCCCTTTTHHHHHHHHH
T ss_pred H---CCCeEEc---CChHH-HHHH-hCc--EEeccCCCCcHHHHHHHHH
Confidence 9 9986553 33343 3333 345 88877 66666543
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.4e-13 Score=110.00 Aligned_cols=106 Identities=14% Similarity=0.136 Sum_probs=86.0
Q ss_pred HHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhc
Q 027821 95 PDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k 174 (218)
.+.|+++|++++|+||+++..++.++++ +|+..+|+.+ ++||+.++.+++..++++.+++||||+.+|+.+| +
T Consensus 55 l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgl~~~f~~~-----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~-~ 127 (189)
T 3mn1_A 55 IKMLIASGVTTAIISGRKTAIVERRAKS-LGIEHLFQGR-----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVI-R 127 (189)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-H
T ss_pred HHHHHHCCCEEEEEECcChHHHHHHHHH-cCCHHHhcCc-----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHH-H
Confidence 3344489999999999999999999999 9999888865 7999999999999998999999999999999999 9
Q ss_pred cCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC------hhHHHhhc
Q 027821 175 EPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ------LSDFSRKL 217 (218)
Q Consensus 175 ~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~------~~~l~~~~ 217 (218)
+ ||+.++ .|...+... . .++ +++.+ +.++.+++
T Consensus 128 ~---ag~~~~---~~~~~~~~~-~-~ad--~v~~~~~~~G~~~~l~~~l 166 (189)
T 3mn1_A 128 R---VGLGMA---VANAASFVR-E-HAH--GITRAQGGEGAAREFCELI 166 (189)
T ss_dssp H---SSEEEE---CTTSCHHHH-H-TSS--EECSSCTTTTHHHHHHHHH
T ss_pred H---CCCeEE---eCCccHHHH-H-hCC--EEecCCCCCcHHHHHHHHH
Confidence 9 997543 454444333 2 346 88888 56666543
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.3e-13 Score=107.29 Aligned_cols=105 Identities=16% Similarity=0.129 Sum_probs=84.5
Q ss_pred HHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhc
Q 027821 95 PDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k 174 (218)
.+.|+++|++++|+||+.+..++.++++ +|+. +|+ . .+|||+.++.+++..++++.+++||||+.+|+.++ +
T Consensus 48 l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgi~-~~~----~-~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~-~ 119 (176)
T 3mmz_A 48 IAALRKSGLTMLILSTEQNPVVAARARK-LKIP-VLH----G-IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCF-A 119 (176)
T ss_dssp HHHHHHTTCEEEEEESSCCHHHHHHHHH-HTCC-EEE----S-CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-H
T ss_pred HHHHHHCCCeEEEEECcChHHHHHHHHH-cCCe-eEe----C-CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHH-H
Confidence 4444489999999999999999999999 9987 333 2 28999999999999998999999999999999999 9
Q ss_pred cCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC------hhHHHhhc
Q 027821 175 EPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ------LSDFSRKL 217 (218)
Q Consensus 175 ~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~------~~~l~~~~ 217 (218)
+ ||+. +.++..++.... .++ +++.+ +.++.+++
T Consensus 120 ~---ag~~---v~~~~~~~~~~~--~ad--~v~~~~~~~g~~~~l~~~l 158 (176)
T 3mmz_A 120 L---VGWP---VAVASAHDVVRG--AAR--AVTTVPGGDGAIREIASWI 158 (176)
T ss_dssp H---SSEE---EECTTCCHHHHH--HSS--EECSSCTTTTHHHHHHHHH
T ss_pred H---CCCe---EECCChhHHHHH--hCC--EEecCCCCCcHHHHHHHHH
Confidence 9 9964 345555544333 346 88888 77777654
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.43 E-value=1.5e-13 Score=117.78 Aligned_cols=112 Identities=19% Similarity=0.199 Sum_probs=88.4
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
....++||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++ .+|...++++.. . .+|+||
T Consensus 160 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~---~~K~~~~~~l~~----~-~~~~~v 230 (287)
T 3a1c_A 160 VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAEVLP---HQKSEEVKKLQA----K-EVVAFV 230 (287)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCT---TCHHHHHHHHTT----T-CCEEEE
T ss_pred eccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCceeeeecCh---HHHHHHHHHHhc----C-CeEEEE
Confidence 34689999999999 78999999999999999999999 999999887753 356555555544 3 678999
Q ss_pred cCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHhhc
Q 027821 163 EDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 217 (218)
Q Consensus 163 GDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~~~ 217 (218)
||+.+|+.+| ++ ||+. |.||..... ....|++++ +++.++...+
T Consensus 231 GDs~~Di~~a-~~---ag~~---v~~~~~~~~----~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 231 GDGINDAPAL-AQ---ADLG---IAVGSGSDV----AVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp ECTTTCHHHH-HH---SSEE---EEECCCSCC----SSCCSSEEESSSCTHHHHHHH
T ss_pred ECCHHHHHHH-HH---CCee---EEeCCCCHH----HHhhCCEEEeCCCHHHHHHHH
Confidence 9999999999 99 9985 445654322 122455999 9999988765
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.7e-13 Score=124.11 Aligned_cols=91 Identities=21% Similarity=0.245 Sum_probs=80.6
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCC------------hHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHH
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQ------------SRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQ 149 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~------------~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~ 149 (218)
.+|||+.++|+ ++|++++|+||++ ...+..+|++ +|+. |+.+++++ +||+|+++..++
T Consensus 87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~-lgl~--fd~i~~~~~~~~~KP~p~~~~~a~ 163 (416)
T 3zvl_A 87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQ 163 (416)
T ss_dssp ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSTTSTTSSHHHHHHH
T ss_pred hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHH-cCCC--EEEEEECCCCCCCCCCHHHHHHHH
Confidence 48999999999 8999999999976 2338899999 9995 99998876 689999999999
Q ss_pred hcCC----CCCCcEEEEcCCh-----------------hhHHHhhccCccCCceEEEE
Q 027821 150 KKPE----LQGMTLHFVEDRL-----------------ATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 150 ~~~~----~~~~e~l~IGDs~-----------------~Di~aA~k~~~~AGv~~i~V 186 (218)
..++ +++.+|+||||+. .|+.+| ++ +|++++..
T Consensus 164 ~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A-~~---aGi~f~~p 217 (416)
T 3zvl_A 164 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFA-LN---VGLPFATP 217 (416)
T ss_dssp HHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHH-HH---HTCCEECH
T ss_pred HHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHH-HH---cCCcccCc
Confidence 8886 8899999999997 899999 99 99998865
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.42 E-value=8.6e-14 Score=121.60 Aligned_cols=122 Identities=14% Similarity=0.152 Sum_probs=95.0
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc-----------CC---CCChHHHHHH
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG-----------LG---TGPKVEVLKQ 147 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g-----------~d---~kpkPe~l~~ 147 (218)
....+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+..+. .+ .||||+.++.
T Consensus 174 ~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~ 252 (335)
T 3n28_A 174 RETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQ-LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLT 252 (335)
T ss_dssp HTTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHH
T ss_pred HHhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHH
Confidence 344679999999999 88999999999999999999999 999988875421 12 3699999999
Q ss_pred HHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 148 LQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+++.+++++.+|+||||+.+|+.+| ++ ||+.++ | ...+. +++ .++.....+++.++..+|
T Consensus 253 ~~~~lgi~~~~~v~vGDs~nDi~~a-~~---aG~~va---~-~~~~~-~~~-~a~~v~~~~~l~~v~~~L 312 (335)
T 3n28_A 253 LAQQYDVEIHNTVAVGDGANDLVMM-AA---AGLGVA---Y-HAKPK-VEA-KAQTAVRFAGLGGVVCIL 312 (335)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHH-HH---SSEEEE---E-SCCHH-HHT-TSSEEESSSCTHHHHHHH
T ss_pred HHHHcCCChhhEEEEeCCHHHHHHH-HH---CCCeEE---e-CCCHH-HHh-hCCEEEecCCHHHHHHHH
Confidence 9999999999999999999999999 99 998544 3 23333 332 345224455666666554
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-14 Score=121.08 Aligned_cols=111 Identities=16% Similarity=0.094 Sum_probs=86.9
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDR 165 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs 165 (218)
.++||+.++|+ ++|++++|+||+++..++.++++ +|+..+|+.+++.+ |...++.+.... +++||||+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~~~~---k~~~~k~~~~~~-----~~~~vGD~ 214 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEE-LGLDDYFAEVLPHE---KAEKVKEVQQKY-----VTAMVGDG 214 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCGGG---HHHHHHHHHTTS-----CEEEEECT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCChhHhHhcCHHH---HHHHHHHHHhcC-----CEEEEeCC
Confidence 68999999999 78999999999999999999999 99999999887764 333333333322 66999999
Q ss_pred hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 166 LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 166 ~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+|+.+| ++ || ++|.||.++...+. .+++.+..+++.++...+
T Consensus 215 ~nDi~~~-~~---Ag---~~va~~~~~~~~~~--~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 215 VNDAPAL-AQ---AD---VGIAIGAGTDVAVE--TADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp TTTHHHH-HH---SS---EEEECSCCSSSCCC--SSSEECSSCCTHHHHHHH
T ss_pred chhHHHH-Hh---CC---ceEEecCCcHHHHh--hCCEEEeCCCHHHHHHHH
Confidence 9999999 99 99 47888987665443 345224448898887654
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.42 E-value=9.1e-15 Score=120.75 Aligned_cols=96 Identities=10% Similarity=0.011 Sum_probs=76.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEE-c------CCCCChHHHHHHHHhcCCCCCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY-G------LGTGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~-g------~d~kpkPe~l~~l~~~~~~~~~ 157 (218)
..++||+.++|+ ++|++++|+||++...++.++++ +.++|+.++ + ...||+|+++..++++.++
T Consensus 87 ~~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~---l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~--- 160 (211)
T 2b82_A 87 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT---LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI--- 160 (211)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH---HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE---
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH---HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC---
Confidence 346889999998 78999999999987655555554 234566552 2 1267899999999988875
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
|+||||+.+|+++| ++ +|+++|+|.||+++..
T Consensus 161 -~l~VGDs~~Di~aA-~~---aG~~~i~v~~g~~~~~ 192 (211)
T 2b82_A 161 -RIFYGDSDNDITAA-RD---VGARGIRILRASNSTY 192 (211)
T ss_dssp -EEEEESSHHHHHHH-HH---TTCEEEECCCCTTCSS
T ss_pred -EEEEECCHHHHHHH-HH---CCCeEEEEecCCCCcc
Confidence 79999999999999 99 9999999999987653
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.41 E-value=5e-13 Score=109.18 Aligned_cols=92 Identities=14% Similarity=-0.013 Sum_probs=78.0
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc------------CC--CCChHHHHHHHHhc
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG------------LG--TGPKVEVLKQLQKK 151 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g------------~d--~kpkPe~l~~l~~~ 151 (218)
.++||+.++|+ ++|++++|+||+.+..++.++++ +|+..+|...+. .. .++|++.+..++..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARA-FGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 57999999999 78999999999999999999999 999866654321 11 23678888888888
Q ss_pred CC---CCCCcEEEEcCChhhHHHhhccCccCCceEEE
Q 027821 152 PE---LQGMTLHFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 152 ~~---~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~ 185 (218)
.+ +++.+|+|||||.+|+.+| ++ ||+.++.
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~~~~-~~---ag~~~~~ 203 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDVPLL-EA---VTRPIAA 203 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGHHHH-HH---SSEEEEE
T ss_pred cCCCcCchhheEEEeCCHhhHHHH-Hh---CCCeEEE
Confidence 88 7889999999999999999 99 9987754
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.40 E-value=8.3e-13 Score=107.13 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=83.7
Q ss_pred HHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCc
Q 027821 98 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 177 (218)
Q Consensus 98 L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~ 177 (218)
|+++|++++|+||++...++.++++ +|+..+|+.+ ||||+.++.+++..++++.+++||||+.+|+.+| ++
T Consensus 58 L~~~g~~~~ivTn~~~~~~~~~l~~-lgl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~-~~-- 128 (191)
T 3n1u_A 58 LMAAGIQVAIITTAQNAVVDHRMEQ-LGITHYYKGQ-----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLI-QQ-- 128 (191)
T ss_dssp HHHTTCEEEEECSCCSHHHHHHHHH-HTCCEEECSC-----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-HH--
T ss_pred HHHCCCeEEEEeCcChHHHHHHHHH-cCCccceeCC-----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH-HH--
Confidence 3389999999999999999999999 9998877755 8999999999999988999999999999999999 99
Q ss_pred cCCceEEEEecCCCCHHHHHhccCCCCeEEcC------hhHHHhhc
Q 027821 178 LDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ------LSDFSRKL 217 (218)
Q Consensus 178 ~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~------~~~l~~~~ 217 (218)
+|+.+ ++ +...+. +.. .++ +++.+ +.++.+++
T Consensus 129 -ag~~~-~~--~~~~~~-~~~-~ad--~v~~~~~~~g~~~~l~~~l 166 (191)
T 3n1u_A 129 -VGLGV-AV--SNAVPQ-VLE-FAD--WRTERTGGRGAVRELCDLI 166 (191)
T ss_dssp -SSEEE-EC--TTCCHH-HHH-HSS--EECSSCTTTTHHHHHHHHH
T ss_pred -CCCEE-Ee--CCccHH-HHH-hCC--EEecCCCCCcHHHHHHHHH
Confidence 99876 33 434433 322 346 88887 55665543
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.8e-15 Score=121.98 Aligned_cols=121 Identities=15% Similarity=0.187 Sum_probs=91.6
Q ss_pred HHHHHHHHhcccccccccCCCCCChHHHHH---hC-CCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHH
Q 027821 70 GKVRDEWMDKDLTTWIGANRFYPGIPDALK---FA-SSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVL 145 (218)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~-g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l 145 (218)
+.+++.|.+.. +.....++||+.++|+ ++ |++++|+||+++..++..|++ +|+ |+.++|++
T Consensus 57 ~~~~~~~~~~~---~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~gl---f~~i~~~~-------- 121 (193)
T 2i7d_A 57 DKVASVYEAPG---FFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEK-YRW---VEQHLGPQ-------- 121 (193)
T ss_dssp HHHHHHHTSTT---TTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHH-HHH---HHHHHCHH--------
T ss_pred HHHHHHHHhcC---ccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHH-hCc---hhhhcCHH--------
Confidence 45556664321 1345689999999999 66 999999999999999999999 999 88887643
Q ss_pred HHHHhcCCCCCCcEEEEcCChhh----HHHhhc-cCccCCceEEEEecCCCCHHHHHhccCCCCe-EEcCh-hHHHhh
Q 027821 146 KQLQKKPELQGMTLHFVEDRLAT----LKNVIK-EPELDGWNLYLGDWGYNTQKEREEAASIPRI-QLLQL-SDFSRK 216 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~D----i~aA~k-~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~-~~~~~-~~l~~~ 216 (218)
++++.++++.+|+||||+..| +.+| + + +|+++|++.++++.... .. |.+ .++++ +++...
T Consensus 122 --~~~~~~~~~~~~~~vgDs~~dD~~~i~~A-~~~---aG~~~i~~~~~~~~~~~---~~--~~~~~v~~~~~~~~~~ 188 (193)
T 2i7d_A 122 --FVERIILTRDKTVVLGDLLIDDKDTVRGQ-EET---PSWEHILFTCCHNRHLV---LP--PTRRRLLSWSDNWREI 188 (193)
T ss_dssp --HHTTEEECSCGGGBCCSEEEESSSCCCSS-CSS---CSSEEEEECCGGGTTCC---CC--TTSCEECSTTSCHHHH
T ss_pred --HHHHcCCCcccEEEECCchhhCcHHHhhc-ccc---cccceEEEEeccCcccc---cc--cchHHHhhHHHHHHHH
Confidence 455566678888999999999 9999 8 9 99999999887654422 12 224 58888 444443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=109.95 Aligned_cols=77 Identities=17% Similarity=0.148 Sum_probs=67.6
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHH----hccCCCCeEEcChhH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKERE----EAASIPRIQLLQLSD 212 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~----~a~~~p~~~~~~~~~ 212 (218)
.||||.+++.+++.+++++.+++||||+ .+|+.+| ++ +|+++++|.||+...+.+. .....|+++++++.|
T Consensus 186 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~-~~---~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~e 261 (268)
T 3qgm_A 186 GKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAG-KA---IGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKD 261 (268)
T ss_dssp STTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHH-HH---HTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHH
T ss_pred CCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHH-HH---CCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHH
Confidence 4688999999999999999999999999 5999999 99 9999999999998887776 444456699999999
Q ss_pred HHhhcC
Q 027821 213 FSRKLK 218 (218)
Q Consensus 213 l~~~~~ 218 (218)
|..+++
T Consensus 262 l~~~l~ 267 (268)
T 3qgm_A 262 MVEALE 267 (268)
T ss_dssp HHHTC-
T ss_pred HHHHHh
Confidence 999874
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.39 E-value=6.7e-13 Score=109.85 Aligned_cols=98 Identities=11% Similarity=0.060 Sum_probs=80.7
Q ss_pred HHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 96 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 96 e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||++++.+++..++++.+|+||||+.+|+.+| ++
T Consensus 86 ~~L~~~G~~l~I~T~~~~~~~~~~l~~-lgi~~~f~~~-----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~-~~ 158 (211)
T 3ij5_A 86 RCLITSDIDVAIITGRRAKLLEDRANT-LGITHLYQGQ-----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVM-AQ 158 (211)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHHHHH-HTCCEEECSC-----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-TT
T ss_pred HHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCchhhccc-----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHH-HH
Confidence 444489999999999999999999999 9998888755 8999999999999998999999999999999999 99
Q ss_pred CccCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 176 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 176 ~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
||+.++ + +..... . ...++ +++.++
T Consensus 159 ---ag~~~a-~--~~~~~~-~-~~~Ad--~v~~~~ 183 (211)
T 3ij5_A 159 ---VGLSVA-V--ADAHPL-L-LPKAH--YVTRIK 183 (211)
T ss_dssp ---SSEEEE-C--TTSCTT-T-GGGSS--EECSSC
T ss_pred ---CCCEEE-e--CCccHH-H-HhhCC--EEEeCC
Confidence 997654 2 323322 2 23456 888776
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.5e-12 Score=102.18 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=78.9
Q ss_pred cccCCCCCChHHHHH--hCCCcEEEEcCC---Ch--HHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCC
Q 027821 85 IGANRFYPGIPDALK--FASSRIYIVTTK---QS--RFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~--~~g~~laIvTnk---~~--~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~ 157 (218)
....+++||+.++|+ +++++++||||+ ++ ......|++++++..+|+.|++.+.. .. .
T Consensus 65 ~~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-----------~l----~ 129 (180)
T 3bwv_A 65 FRNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-----------II----L 129 (180)
T ss_dssp GGSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-----------GB----C
T ss_pred hccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-----------ee----c
Confidence 345789999999999 557999999999 43 23355565536788889999988731 11 3
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+|+|||||++|+.+| || ++|++.|+++.. +.|+++++++.|+...+
T Consensus 130 ~~l~ieDs~~~i~~a------aG-~~i~~~~~~~~~-------~~~~~~i~~~~el~~~l 175 (180)
T 3bwv_A 130 ADYLIDDNPKQLEIF------EG-KSIMFTASHNVY-------EHRFERVSGWRDVKNYF 175 (180)
T ss_dssp CSEEEESCHHHHHHC------SS-EEEEECCGGGTT-------CCSSEEECSHHHHHHHH
T ss_pred ccEEecCCcchHHHh------CC-CeEEeCCCcccC-------CCCceecCCHHHHHHHH
Confidence 459999999999655 99 999999887532 24559999999988764
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.38 E-value=8.7e-13 Score=110.99 Aligned_cols=74 Identities=15% Similarity=0.195 Sum_probs=66.3
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
.||+|++++.+++.+++++.+++||||+ .+|+.+| ++ +|+++++|.||++..+++......|+++++++.||..
T Consensus 181 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a-~~---aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~~ 255 (264)
T 3epr_A 181 GKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAG-IN---NDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTF 255 (264)
T ss_dssp STTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHH-HH---HTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCCS
T ss_pred CCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHH-HH---CCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHhc
Confidence 4789999999999999999999999999 6999999 99 9999999999999988887664456699999999864
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.5e-13 Score=121.26 Aligned_cols=118 Identities=14% Similarity=0.097 Sum_probs=93.0
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEE-------c----CC---CCChHHHHHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY-------G----LG---TGPKVEVLKQLQ 149 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~-------g----~d---~kpkPe~l~~l~ 149 (218)
..+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+..+ + .+ .||||++++.++
T Consensus 254 ~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~ 332 (415)
T 3p96_A 254 QLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEE-LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFA 332 (415)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHH
T ss_pred hCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHH
Confidence 4589999999999 88999999999999999999999 99998876432 1 12 468999999999
Q ss_pred hcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc--ChhHHHhhc
Q 027821 150 KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKL 217 (218)
Q Consensus 150 ~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~--~~~~l~~~~ 217 (218)
++.++++.+++||||+.+|+.+| ++ ||+.++ | ...+ .+.+ .++ ++++ ++..++..+
T Consensus 333 ~~~gi~~~~~i~vGD~~~Di~~a-~~---aG~~va---~-~~~~-~~~~-~ad--~~i~~~~l~~ll~~l 390 (415)
T 3p96_A 333 QRAGVPMAQTVAVGDGANDIDML-AA---AGLGIA---F-NAKP-ALRE-VAD--ASLSHPYLDTVLFLL 390 (415)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHH-HH---SSEEEE---E-SCCH-HHHH-HCS--EEECSSCTTHHHHHT
T ss_pred HHcCcChhhEEEEECCHHHHHHH-HH---CCCeEE---E-CCCH-HHHH-hCC--EEEccCCHHHHHHHh
Confidence 99999999999999999999999 99 998655 4 2333 3333 345 5544 566665544
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.4e-12 Score=105.06 Aligned_cols=98 Identities=11% Similarity=0.067 Sum_probs=79.5
Q ss_pred HHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 96 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 96 e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
+.|+++|++++|+||++...++.++++ +|+..+|+. .||||+.++.+++..++++.+++||||+.+|+.+| ++
T Consensus 63 ~~L~~~g~~v~ivT~~~~~~~~~~l~~-lgl~~~~~~-----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a-~~ 135 (188)
T 2r8e_A 63 RCALTSDIEVAIITGRKAKLVEDRCAT-LGITHLYQG-----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVM-EK 135 (188)
T ss_dssp HHHHTTTCEEEEECSSCCHHHHHHHHH-HTCCEEECS-----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHH-TT
T ss_pred HHHHHCCCeEEEEeCCChHHHHHHHHH-cCCceeecC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH-HH
Confidence 334488999999999999999999999 999866643 48999999999999888889999999999999999 99
Q ss_pred CccCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 176 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 176 ~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
+|+.++ ++.+.. .+.. .++ +++.++
T Consensus 136 ---ag~~~~---~~~~~~-~~~~-~ad--~v~~~~ 160 (188)
T 2r8e_A 136 ---VGLSVA---VADAHP-LLIP-RAD--YVTRIA 160 (188)
T ss_dssp ---SSEEEE---CTTSCT-TTGG-GSS--EECSSC
T ss_pred ---CCCEEE---ecCcCH-HHHh-cCC--EEEeCC
Confidence 999764 333332 2222 345 988886
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.36 E-value=9.6e-15 Score=118.24 Aligned_cols=108 Identities=15% Similarity=0.098 Sum_probs=85.4
Q ss_pred ccCCCCCChHHHHH---hC-CCcEEEEcCCChHHHHHHHHHhcCCCC-CCceEEcCCCCChHHHHHHHHhcCCCCCCcEE
Q 027821 86 GANRFYPGIPDALK---FA-SSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLGTGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~-g~~laIvTnk~~~~~~~iL~~~~gl~~-~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
....++||+.++|+ ++ |++++|+||+++..++..+++ +|+.. +|+ ..+++..++++.+|+
T Consensus 72 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~f~--------------~~~~~~l~~~~~~~~ 136 (197)
T 1q92_A 72 FELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEK-YAWVEKYFG--------------PDFLEQIVLTRDKTV 136 (197)
T ss_dssp TTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHH-HHHHHHHHC--------------GGGGGGEEECSCSTT
T ss_pred hcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHH-hchHHHhch--------------HHHHHHhccCCccEE
Confidence 35689999999999 67 999999999999989999999 99988 886 344555566677889
Q ss_pred EEcCChhh----HHHhhc-cCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh-HHHhh
Q 027821 161 FVEDRLAT----LKNVIK-EPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS-DFSRK 216 (218)
Q Consensus 161 ~IGDs~~D----i~aA~k-~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~-~l~~~ 216 (218)
||||+..| +++| + + ||+++|++.++++.... ..++ ...++++. ++...
T Consensus 137 ~vgDs~~dD~~~~~~a-~~~---aG~~~i~~~~~~~~~~~---~~~~-~~~v~~~~~~l~~~ 190 (197)
T 1q92_A 137 VSADLLIDDRPDITGA-EPT---PSWEHVLFTACHNQHLQ---LQPP-RRRLHSWADDWKAI 190 (197)
T ss_dssp SCCSEEEESCSCCCCS-CSS---CSSEEEEECCTTTTTCC---CCTT-CEEECCTTSCHHHH
T ss_pred EECcccccCCchhhhc-ccC---CCceEEEecCccccccc---cccc-chhhhhHHHHHHHH
Confidence 99999999 9999 8 9 99999999998875321 2222 23688884 55443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.3e-14 Score=118.78 Aligned_cols=76 Identities=11% Similarity=0.069 Sum_probs=63.8
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
.||||+.++.+++.+++++++|++|||+. +|+.+| ++ ||+.+++|.||.............|+++++++.|+..+
T Consensus 189 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a-~~---aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~ 264 (271)
T 2x4d_A 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGA-QR---CGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDL 264 (271)
T ss_dssp STTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHH-HH---TTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHH
T ss_pred cCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHH-HH---CCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHH
Confidence 57999999999999999999999999998 999999 99 99999999999554433222123466999999999887
Q ss_pred c
Q 027821 217 L 217 (218)
Q Consensus 217 ~ 217 (218)
+
T Consensus 265 l 265 (271)
T 2x4d_A 265 L 265 (271)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.8e-12 Score=103.98 Aligned_cols=96 Identities=13% Similarity=0.111 Sum_probs=78.8
Q ss_pred HHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCc
Q 027821 98 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 177 (218)
Q Consensus 98 L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~ 177 (218)
|+++|++++|+||++...++.++++ +|+..+|+.+ ||||+.++.+++..++++.+++||||+.+|+.++ ++
T Consensus 64 L~~~G~~~~ivT~~~~~~~~~~l~~-lgi~~~~~~~-----k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~-~~-- 134 (195)
T 3n07_A 64 LMNAGIEIAIITGRRSQIVENRMKA-LGISLIYQGQ-----DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVM-EK-- 134 (195)
T ss_dssp HHHTTCEEEEECSSCCHHHHHHHHH-TTCCEEECSC-----SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHH-TT--
T ss_pred HHHCCCEEEEEECcCHHHHHHHHHH-cCCcEEeeCC-----CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH-HH--
Confidence 3389999999999999999999999 9998777643 8999999999999999999999999999999999 99
Q ss_pred cCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 178 LDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 178 ~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
+|+.++ .+...+. ++. .++ +++.+.
T Consensus 135 -ag~~va---~~na~~~-~~~-~ad--~v~~~~ 159 (195)
T 3n07_A 135 -VALRVC---VADGHPL-LAQ-RAN--YVTHIK 159 (195)
T ss_dssp -SSEEEE---CTTSCHH-HHH-HCS--EECSSC
T ss_pred -CCCEEE---ECChHHH-HHH-hCC--EEEcCC
Confidence 997643 3434433 333 345 887764
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-13 Score=109.43 Aligned_cols=113 Identities=8% Similarity=0.045 Sum_probs=86.0
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---C--CChHHHHHHHHhcCCCCCC
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG---T--GPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d---~--kpkPe~l~~l~~~~~~~~~ 157 (218)
....++||+.++|+ ++|++++|+||+....++.+ ++ +|+..+|+.+.+.+ . +|.|......+... ++.
T Consensus 76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~ 151 (201)
T 4ap9_A 76 EKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KE-LGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDG 151 (201)
T ss_dssp GGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TT-TSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTS
T ss_pred HhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HH-cCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcC
Confidence 44689999999999 78999999999999999889 88 99988877766544 1 23332223333333 677
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+|++|||+.+|+.+| ++ ||+. +++..+. . .++ +++.++.|+..++
T Consensus 152 ~~i~iGD~~~Di~~~-~~---ag~~-v~~~~~~--~------~ad--~v~~~~~el~~~l 196 (201)
T 4ap9_A 152 FILAMGDGYADAKMF-ER---ADMG-IAVGREI--P------GAD--LLVKDLKELVDFI 196 (201)
T ss_dssp CEEEEECTTCCHHHH-HH---CSEE-EEESSCC--T------TCS--EEESSHHHHHHHH
T ss_pred cEEEEeCCHHHHHHH-Hh---CCce-EEECCCC--c------ccc--EEEccHHHHHHHH
Confidence 899999999999999 99 9996 5554333 2 445 9999999998776
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=3e-14 Score=119.63 Aligned_cols=123 Identities=12% Similarity=0.094 Sum_probs=86.6
Q ss_pred CCCCChHHHHH--hCCCcEEEEcCCChHHHH---HHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 89 RFYPGIPDALK--FASSRIYIVTTKQSRFAD---ALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 89 ~l~pGv~e~L~--~~g~~laIvTnk~~~~~~---~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
..|+++.+.+. ..+. ..++||+...... ..+.. .++..+|+.+++.+ .||||..++.+++.++++++++
T Consensus 126 ~~~~~~~~~~~~l~~~~-~~i~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 203 (266)
T 3pdw_A 126 ITYEKFAVGCLAIRNGA-RFISTNGDIAIPTERGLLPGN-GSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSET 203 (266)
T ss_dssp CCHHHHHHHHHHHHTTC-EEEESCCCCEEEETTEEEECH-HHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGE
T ss_pred CCHHHHHHHHHHHHCCC-eEEEEcCCceeECCCceEecc-hHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhE
Confidence 45677777777 5555 6678887642110 00111 12233455555554 5799999999999999999999
Q ss_pred EEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
++|||+ .+|+.+| ++ +|+.+++|.||++..++++.+...|+++++++.||.+++
T Consensus 204 ~~iGD~~~~Di~~~-~~---aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~ 258 (266)
T 3pdw_A 204 LMVGDNYATDIMAG-IN---AGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYI 258 (266)
T ss_dssp EEEESCTTTHHHHH-HH---HTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHH
T ss_pred EEECCCcHHHHHHH-HH---CCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHh
Confidence 999999 7999999 99 999999999999888777665445669999999998864
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.1e-12 Score=103.24 Aligned_cols=103 Identities=12% Similarity=0.003 Sum_probs=83.8
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChh
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLA 167 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~ 167 (218)
.+...++|+ ++|++++|+||++...++.++++ +|+..+|+. .+|||+.++.+++..++++.+++||||+.+
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~-lgl~~~~~~-----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~ 110 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIAD-LGIKLFFLG-----KLEKETACFDLMKQAGVTAEQTAYIGDDSV 110 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCEEEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHH-cCCceeecC-----CCCcHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 345667777 88999999999999999999999 999877642 479999999999988888999999999999
Q ss_pred hHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 168 TLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 168 Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
|+.++ ++ +|+.++. +... +.+. ..++ +++.+.
T Consensus 111 Di~~~-~~---ag~~~~~---~~~~-~~~~-~~ad--~v~~~~ 142 (180)
T 1k1e_A 111 DLPAF-AA---CGTSFAV---ADAP-IYVK-NAVD--HVLSTH 142 (180)
T ss_dssp GHHHH-HH---SSEEEEC---TTSC-HHHH-TTSS--EECSSC
T ss_pred HHHHH-HH---cCCeEEe---CCcc-HHHH-hhCC--EEecCC
Confidence 99999 99 9987663 3333 3333 3445 888875
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.15 E-value=6e-11 Score=101.07 Aligned_cols=107 Identities=15% Similarity=0.082 Sum_probs=79.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCC---hHHHHHHHHHhcCCC--CCCceEEcCCCCChHHHHHHHHhcCCCCCCcE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQ---SRFADALLRELAGVT--IPPDRIYGLGTGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~---~~~~~~iL~~~~gl~--~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
..++||+.++|+ ++|++++||||++ ...+...|+. +|+. .+|+.+++.+...||++...+.. .+ ...+
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~-~Gl~~v~~~~vi~~~~~~~K~~~~~~~~~-~~--~~~~ 175 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLER-VGAPQATKEHILLQDPKEKGKEKRRELVS-QT--HDIV 175 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHH-HTCSSCSTTTEEEECTTCCSSHHHHHHHH-HH--EEEE
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHH-cCCCcCCCceEEECCCCCCCcHHHHHHHH-hC--CCce
Confidence 579999999999 8999999999998 6678888999 9998 88999988773334444433332 22 2237
Q ss_pred EEEcCChhhHHHhhc-------c------CccCCceEEEEecCCCCHHHHHhc
Q 027821 160 HFVEDRLATLKNVIK-------E------PELDGWNLYLGDWGYNTQKEREEA 199 (218)
Q Consensus 160 l~IGDs~~Di~aA~k-------~------~~~AGv~~i~V~~G~~~~~~l~~a 199 (218)
+||||+.+|+.+| + + ...+|+++|++.++.....+-..+
T Consensus 176 l~VGDs~~Di~aA-~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w~~~~~ 227 (258)
T 2i33_A 176 LFFGDNLSDFTGF-DGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWEGALY 227 (258)
T ss_dssp EEEESSGGGSTTC-SSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHHHHHHT
T ss_pred EEeCCCHHHhccc-ccCCHHHHHHHHHHHHHHhcCceEECCCCCcchhhhhhc
Confidence 8999999999999 5 1 001599999999986555443334
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.1e-11 Score=102.58 Aligned_cols=112 Identities=13% Similarity=0.009 Sum_probs=90.6
Q ss_pred CCCCChHHHHH---hC-CCcEEEEcCC---------------------ChHHHHHHHHHhcCCCCCCceE----------
Q 027821 89 RFYPGIPDALK---FA-SSRIYIVTTK---------------------QSRFADALLRELAGVTIPPDRI---------- 133 (218)
Q Consensus 89 ~l~pGv~e~L~---~~-g~~laIvTnk---------------------~~~~~~~iL~~~~gl~~~Fd~I---------- 133 (218)
.+++++.++|+ +. |++++++|++ ..+.+..++++ +|+..+|+.+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEE-YGVSVNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHH-HTEEEEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHH-cCCCEEEEEccccccCCCCc
Confidence 46789999988 44 9999999988 67788899999 9998777665
Q ss_pred EcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 134 YGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 134 ~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
++.+ .++|++.++.+++..++++.+|++|||+.+|+.++ ++ +| ++|.||..+++.... ++ +++.+
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~-~~---ag---~~~~~~~~~~~~~~~--a~--~v~~~ 269 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRML-QT---VG---NGYLLKNATQEAKNL--HN--LITDS 269 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-TT---SS---EEEECTTCCHHHHHH--CC--CBCSS
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHH-Hh---CC---cEEEECCccHHHHHh--CC--EEcCC
Confidence 3333 46999999999999999999999999999999999 99 99 456678776654433 45 88887
Q ss_pred hhH
Q 027821 210 LSD 212 (218)
Q Consensus 210 ~~~ 212 (218)
+.+
T Consensus 270 ~~~ 272 (289)
T 3gyg_A 270 EYS 272 (289)
T ss_dssp CHH
T ss_pred CCc
Confidence 665
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.06 E-value=1e-11 Score=101.76 Aligned_cols=93 Identities=9% Similarity=-0.130 Sum_probs=78.8
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-C-CChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-T-GPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~-kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
+.++||+.++|+ .+.++++|+||+.+..++.+++. +|+..+|+.+++.+ . ..| +.+.+.+...+.++.+|++||
T Consensus 67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~-ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~vivD 144 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADL-LDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIVD 144 (195)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEEE
T ss_pred EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEEE
Confidence 568999999999 43499999999999999999999 99999999998876 2 223 556666667777889999999
Q ss_pred CChhhHHHhhccCccCCceEEEE
Q 027821 164 DRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V 186 (218)
|++.++.+| ++ ||+.+...
T Consensus 145 Ds~~~~~~~-~~---ngi~i~~~ 163 (195)
T 2hhl_A 145 NSPASYIFH-PE---NAVPVQSW 163 (195)
T ss_dssp SCGGGGTTC-GG---GEEECCCC
T ss_pred CCHHHhhhC-cc---CccEEeee
Confidence 999999999 99 99987443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.3e-10 Score=91.44 Aligned_cols=94 Identities=10% Similarity=0.081 Sum_probs=72.1
Q ss_pred HHHHhCCCcEEEEcCCChHHHHHHHH--HhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhh
Q 027821 96 DALKFASSRIYIVTTKQSRFADALLR--ELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVI 173 (218)
Q Consensus 96 e~L~~~g~~laIvTnk~~~~~~~iL~--~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~ 173 (218)
+.|+++|++++|+||+ ..++.+++ + +|+. + +.+ .++||+.++.+++..++++.+++||||+.+|+.++
T Consensus 46 ~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~-lgi~-~---~~g--~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~- 115 (168)
T 3ewi_A 46 SLLKKSGIEVRLISER--ACSKQTLSALK-LDCK-T---EVS--VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECL- 115 (168)
T ss_dssp HHHHHTTCEEEEECSS--CCCHHHHHTTC-CCCC-E---ECS--CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHH-
T ss_pred HHHHHCCCEEEEEeCc--HHHHHHHHHhC-CCcE-E---EEC--CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHH-
Confidence 4444899999999999 67889999 5 5553 2 233 36899999999999999999999999999999999
Q ss_pred ccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 174 KEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 174 k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
++ +|+.++ + +-.. +++++ .++ +++.+
T Consensus 116 ~~---ag~~~a-~--~na~-~~~k~-~Ad--~v~~~ 141 (168)
T 3ewi_A 116 KR---VGLSAV-P--ADAC-SGAQK-AVG--YICKC 141 (168)
T ss_dssp HH---SSEEEE-C--TTCC-HHHHT-TCS--EECSS
T ss_pred HH---CCCEEE-e--CChh-HHHHH-hCC--EEeCC
Confidence 99 998744 4 2233 33433 446 77765
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.02 E-value=2.3e-11 Score=98.34 Aligned_cols=95 Identities=7% Similarity=-0.084 Sum_probs=78.7
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEcC
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVED 164 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
+.++||+.++|+ .+.++++|+||+.+.+++.+++. +|...+|+.+++.+ .....+.+.+.+...+.++.+|++|||
T Consensus 54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~-ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdD 132 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDN 132 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECS
T ss_pred EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHH-HCCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeC
Confidence 578999999999 44599999999999999999999 99999999998876 211124555555666778899999999
Q ss_pred ChhhHHHhhccCccCCceEEEEecC
Q 027821 165 RLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 165 s~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
++.++.++ .+ +|+.+ ..|-
T Consensus 133 s~~~~~~~-~~---ngi~i--~~~~ 151 (181)
T 2ght_A 133 SPASYVFH-PD---NAVPV--ASWF 151 (181)
T ss_dssp CGGGGTTC-TT---SBCCC--CCCS
T ss_pred CHHHhccC-cC---CEeEe--cccc
Confidence 99999999 99 99985 4553
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.81 E-value=7.2e-10 Score=94.78 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=77.5
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh----HHHHHHHHHhcCCCCCC--ceEEcCCCCChHHHHHHHHhc-CCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS----RFADALLRELAGVTIPP--DRIYGLGTGPKVEVLKQLQKK-PELQG 156 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~----~~~~~iL~~~~gl~~~F--d~I~g~d~kpkPe~l~~l~~~-~~~~~ 156 (218)
..+++||+.++|+ ++|++++|+||++. +.+...|++ +|+..++ ..+...+...|+..+..+... +.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~Gy~--- 174 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKR-LGFNGVEESAFYLKKDKSAKAARFAEIEKQGYE--- 174 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHH-HTCSCCSGGGEEEESSCSCCHHHHHHHHHTTEE---
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHH-cCcCcccccceeccCCCCChHHHHHHHHhcCCC---
Confidence 4689999999999 89999999999865 589999999 9999877 455554455777777777765 43
Q ss_pred CcEEEEcCChhhHHH--------hhccCccCCceEEEEecCC
Q 027821 157 MTLHFVEDRLATLKN--------VIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 157 ~e~l~IGDs~~Di~a--------A~k~~~~AGv~~i~V~~G~ 190 (218)
-++||||..+|+.+ + |+ +++..+++.||.
T Consensus 175 -iv~~vGD~~~Dl~~~~~~~~~~~-r~---a~v~~~~~~fG~ 211 (262)
T 3ocu_A 175 -IVLYVGDNLDDFGNTVYGKLNAD-RR---AFVDQNQGKFGK 211 (262)
T ss_dssp -EEEEEESSGGGGCSTTTTCCHHH-HH---HHHHHTGGGBTT
T ss_pred -EEEEECCChHHhccccccCCHHH-HH---HHHHHHHHHhCC
Confidence 36899999999998 6 77 788888888885
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.3e-09 Score=91.59 Aligned_cols=96 Identities=16% Similarity=0.159 Sum_probs=76.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh----HHHHHHHHHhcCCCCCCc--eEEcCCCCChHHHHHHHHhcCCCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS----RFADALLRELAGVTIPPD--RIYGLGTGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~----~~~~~iL~~~~gl~~~Fd--~I~g~d~kpkPe~l~~l~~~~~~~~~ 157 (218)
..+++||+.++|+ ++|++++|+||++. +.+...|++ +|+..+++ .+...+...|......+... +. .
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~-gy--~ 174 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKR-LGFTGVNDKTLLLKKDKSNKSVRFKQVEDM-GY--D 174 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHH-HTCCCCSTTTEEEESSCSSSHHHHHHHHTT-TC--E
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHH-cCcCccccceeEecCCCCChHHHHHHHHhc-CC--C
Confidence 4689999999999 89999999999865 589999999 99998884 55555544666666666652 22 2
Q ss_pred cEEEEcCChhhHHH--------hhccCccCCceEEEEecCC
Q 027821 158 TLHFVEDRLATLKN--------VIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 158 e~l~IGDs~~Di~a--------A~k~~~~AGv~~i~V~~G~ 190 (218)
-++||||+.+|+.+ + |+ +++..+++.||.
T Consensus 175 iv~~iGD~~~Dl~~~~~~~~~~~-r~---a~v~~~~~~fG~ 211 (260)
T 3pct_A 175 IVLFVGDNLNDFGDATYKKSNAE-RR---DFVAKNSKAFGK 211 (260)
T ss_dssp EEEEEESSGGGGCGGGTTCCHHH-HH---HHHHHTGGGBTT
T ss_pred EEEEECCChHHcCcccccCCHHH-HH---HHHHHHHHHhCC
Confidence 26899999999998 6 77 888888888885
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.75 E-value=6.8e-08 Score=81.04 Aligned_cols=106 Identities=13% Similarity=0.008 Sum_probs=75.9
Q ss_pred ChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcC--CCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcE
Q 027821 93 GIPDALK---FASSRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 93 Gv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~g--l~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
++.++++ ....++.++++ .+..+.+.+. +. +...++.+.+.. ..+|+..++.+++.++++++++
T Consensus 140 ~~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ 216 (279)
T 4dw8_A 140 ETNDFLTDITLPVAKCLIVGD--AGKLIPVESE-LCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEV 216 (279)
T ss_dssp ECSCHHHHSCSCCSCEEEESC--HHHHHHHHHH-HHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGE
T ss_pred cHHHHHHhhcCCceEEEEeCC--HHHHHHHHHH-HHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHE
Confidence 4445554 56777777754 2334444444 33 445677776543 2388999999999999999999
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
++|||+.+|+.++ +. || ++|.+|...++..+. ++ +++.+..+
T Consensus 217 i~~GD~~NDi~m~-~~---ag---~~vam~na~~~~k~~--A~--~v~~~~~e 258 (279)
T 4dw8_A 217 IAIGDGYNDLSMI-KF---AG---MGVAMGNAQEPVKKA--AD--YITLTNDE 258 (279)
T ss_dssp EEEECSGGGHHHH-HH---SS---EEEECTTSCHHHHHH--CS--EECCCGGG
T ss_pred EEECCChhhHHHH-HH---cC---cEEEcCCCcHHHHHh--CC--EEcCCCCC
Confidence 9999999999999 99 88 578889887765543 46 88877544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.70 E-value=4.3e-08 Score=80.77 Aligned_cols=94 Identities=11% Similarity=-0.024 Sum_probs=72.5
Q ss_pred EEEEc-CCChHHHHHHHHHhcCCCCCCceEEcC---C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccC
Q 027821 105 IYIVT-TKQSRFADALLRELAGVTIPPDRIYGL---G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 176 (218)
Q Consensus 105 laIvT-nk~~~~~~~iL~~~~gl~~~Fd~I~g~---d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~ 176 (218)
++++| ++..+.++.++++ ++ .+|+.+.+. + .+||+..++.+++..++++.++++|||+.+|+.++ +.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~-~~- 187 (231)
T 1wr8_A 113 LVIMRETINVETVREIINE-LN--LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAF-KV- 187 (231)
T ss_dssp EEECTTTSCHHHHHHHHHH-TT--CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHH-HH-
T ss_pred EEEECCCCCHHHHHHHHHh-cC--CcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH-HH-
Confidence 57788 7788889999998 76 568877221 1 45999999999998888889999999999999999 99
Q ss_pred ccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 177 ELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 177 ~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+|+. +++.+ +.+ +++. .++ +++.+..+
T Consensus 188 --ag~~-v~~~~--~~~-~~~~-~a~--~v~~~~~e 214 (231)
T 1wr8_A 188 --VGYK-VAVAQ--APK-ILKE-NAD--YVTKKEYG 214 (231)
T ss_dssp --SSEE-EECTT--SCH-HHHT-TCS--EECSSCHH
T ss_pred --cCCe-EEecC--CCH-HHHh-hCC--EEecCCCc
Confidence 9986 45544 443 4443 445 99888665
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.65 E-value=7.8e-08 Score=80.97 Aligned_cols=99 Identities=7% Similarity=-0.039 Sum_probs=75.4
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcC--CCCCCceEEcC----C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhH
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGL----G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATL 169 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~g--l~~~Fd~I~g~----d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di 169 (218)
+.+++++++|++.. +..++++ ++ +..+|+.+.+. + .++|+..++.+++.+++++.++++|||+.+|+
T Consensus 144 ~~~~ki~i~~~~~~--~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~ 220 (271)
T 1rlm_A 144 DVLFKFSLNLPDEQ--IPLVIDK-LHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDA 220 (271)
T ss_dssp SCEEEEEEECCGGG--HHHHHHH-HHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CceEEEEEEcCHHH--HHHHHHH-HHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHH
Confidence 56889999998754 5666666 55 66778888765 2 34999999999999999999999999999999
Q ss_pred HHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 170 KNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 170 ~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.++ +. +|+. |.+|...++ ++. .++ +++.+..+
T Consensus 221 ~m~-~~---ag~~---va~~na~~~-~k~-~a~--~v~~~~~~ 252 (271)
T 1rlm_A 221 EML-KM---ARYS---FAMGNAAEN-IKQ-IAR--YATDDNNH 252 (271)
T ss_dssp HHH-HH---CSEE---EECTTCCHH-HHH-HCS--EECCCGGG
T ss_pred HHH-HH---cCCe---EEeCCccHH-HHH-hCC--eeCcCCCC
Confidence 999 99 9973 335655554 433 346 88877654
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.2e-07 Score=80.26 Aligned_cols=99 Identities=9% Similarity=-0.039 Sum_probs=72.4
Q ss_pred hCCCcEEEE--cCCChHHHHHHHHHhcCCCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhH
Q 027821 100 FASSRIYIV--TTKQSRFADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATL 169 (218)
Q Consensus 100 ~~g~~laIv--Tnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di 169 (218)
...+++.++ +++..+..+.+.+. ++ ..++.+.+.. ..+|+..++.+++.++++++++++|||+.+|+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~-~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPA-WN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHH-HT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHH-hc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 567889998 33333345555566 55 3466666553 23799999999999999999999999999999
Q ss_pred HHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 170 KNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 170 ~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.++ +. || ++|.+|...++..+ .++ +++.+..|
T Consensus 241 ~ml-~~---ag---~~vam~na~~~~k~--~A~--~v~~s~~e 272 (283)
T 3dao_A 241 EML-QN---AG---ISYAVSNARQEVIA--AAK--HTCAPYWE 272 (283)
T ss_dssp HHH-HH---SS---EEEEETTSCHHHHH--HSS--EEECCGGG
T ss_pred HHH-Hh---CC---CEEEcCCCCHHHHH--hcC--eECCCCCC
Confidence 999 99 98 45556766665443 346 88888765
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.4e-08 Score=90.15 Aligned_cols=58 Identities=17% Similarity=0.229 Sum_probs=48.7
Q ss_pred CCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 155 QGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
++.+++||||+. +||.+| ++ +|+++|+|.||+...+. ......|+++++++.|+..|+
T Consensus 289 ~~~~~~~VGD~~~~Di~~A-~~---aG~~ti~V~~G~~~~~~-~~~~~~pd~vi~~l~el~~~i 347 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGA-QN---YGWNSCLVKTGVYNEGD-DLKECKPTLIVNDVFDAVTKT 347 (352)
T ss_dssp TSSEEEEEESCTTTHHHHH-HH---HTCEEEECSSSSCCTTC-CCTTCCCSEECSSHHHHHHHH
T ss_pred CcceEEEEecCcHHHHHHH-HH---cCCEEEEEccCCCCccc-ccccCCCCEEECCHHHHHHHH
Confidence 568999999999 599999 99 99999999999877654 222346679999999999875
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.54 E-value=1.5e-07 Score=78.66 Aligned_cols=69 Identities=7% Similarity=0.023 Sum_probs=55.8
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH--HHh
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD--FSR 215 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~--l~~ 215 (218)
.++||..++.+++.+++++.++++|||+.+|+.++ +. +|+ +|.+|...++ ++. .++ +++.+..+ +..
T Consensus 185 ~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~-~~---ag~---~v~~~n~~~~-~~~-~a~--~v~~~~~~dGv~~ 253 (261)
T 2rbk_A 185 GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISML-RH---AAI---GVAMGQAKED-VKA-AAD--YVTAPIDEDGISK 253 (261)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-HH---SSE---EEECTTSCHH-HHH-HSS--EECCCGGGTHHHH
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH-HH---cCc---eEEecCccHH-HHh-hCC--EEeccCchhhHHH
Confidence 45999999999999998999999999999999999 99 997 4557766654 433 346 99999988 765
Q ss_pred hc
Q 027821 216 KL 217 (218)
Q Consensus 216 ~~ 217 (218)
++
T Consensus 254 ~l 255 (261)
T 2rbk_A 254 AM 255 (261)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.54 E-value=4.2e-07 Score=75.60 Aligned_cols=97 Identities=8% Similarity=-0.065 Sum_probs=72.9
Q ss_pred CCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC------C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHH
Q 027821 101 ASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL------G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLK 170 (218)
Q Consensus 101 ~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~------d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~ 170 (218)
.++...+++ +..+.+..+++. ++.. |+.+.+. + ..+|+..++.+++.++++++++++|||+.+|+.
T Consensus 155 ~~~~ki~~~-~~~~~~~~~~~~-l~~~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~ 230 (274)
T 3fzq_A 155 QDIHKICLW-SNEKVFDEVKDI-LQDK--MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIV 230 (274)
T ss_dssp CCCCEEEEE-CCHHHHHHHHHH-HGGG--EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHH
T ss_pred cCeEEEEEE-cCHHHHHHHHHH-hhcc--eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHH
Confidence 344344444 677778888887 6643 5555432 1 348999999999999999999999999999999
Q ss_pred HhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 171 NVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 171 aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
++ +. || ++|.||..+++..+. ++ +++.+..|
T Consensus 231 m~-~~---ag---~~vam~na~~~~k~~--A~--~v~~~~~e 261 (274)
T 3fzq_A 231 MF-QA---SD---VTIAMKNSHQQLKDI--AT--SICEDIFD 261 (274)
T ss_dssp HH-HT---CS---EEEEETTSCHHHHHH--CS--EEECCGGG
T ss_pred HH-Hh---cC---ceEEecCccHHHHHh--hh--heeCCCch
Confidence 99 99 98 577789888765543 46 88887654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.50 E-value=4.3e-07 Score=76.52 Aligned_cols=111 Identities=12% Similarity=0.048 Sum_probs=78.0
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~ 157 (218)
.+++++.+++. ....++.+. +.. +.+..+++.+.+....+..+.+.. ..+|+..++.+++.++++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~ki~~~-~~~-~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~ 219 (290)
T 3dnp_A 142 QFVESLSDLLMDEPVSAPVIEVY-TEH-DIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMD 219 (290)
T ss_dssp EECSCHHHHHHHSCCCCSEEEEE-CCG-GGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGG
T ss_pred cccCCHHHHHhcCCCCceEEEEe-CCH-HHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHH
Confidence 45778888887 567788554 333 334455544112233456555442 24899999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
++++|||+.+|+.++ +. ||+ +|.+|..+++..+. ++ +++.+..+
T Consensus 220 ~~i~~GD~~NDi~m~-~~---ag~---~vam~na~~~~k~~--Ad--~v~~s~~e 263 (290)
T 3dnp_A 220 DVVAIGHQYDDLPMI-EL---AGL---GVAMGNAVPEIKRK--AD--WVTRSNDE 263 (290)
T ss_dssp GEEEEECSGGGHHHH-HH---SSE---EEECTTSCHHHHHH--SS--EECCCTTT
T ss_pred HEEEECCchhhHHHH-Hh---cCC---EEEecCCcHHHHHh--cC--EECCCCCc
Confidence 999999999999999 99 985 56677776654433 46 88887655
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.47 E-value=3.9e-07 Score=86.76 Aligned_cols=108 Identities=19% Similarity=0.186 Sum_probs=84.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.++.|++.++++ ++|++++++|+.+...++.+.++ +|++. +++.- ...|.+.++.+... .+++|||
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~~----~~~~~~P~~K~~~v~~l~~~-----~~v~~vG 525 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDL----VIAEVLPHQKSEEVKKLQAK-----EVVAFVG 525 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSE----EECSCCTTCHHHHHHHHTTT-----CCEEEEE
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCE----EEEeCCHHhHHHHHHHHhhC-----CeEEEEe
Confidence 568999999999 89999999999999999999999 99863 33333 45788888888765 4679999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHhh
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRK 216 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~~ 216 (218)
|+.||+.+. +. || ++|.+|.++... ...+| +++ +++..+...
T Consensus 526 Dg~ND~~al-~~---A~---vgiamg~g~~~a--~~~AD--~vl~~~~~~~i~~~ 569 (645)
T 3j08_A 526 DGINDAPAL-AQ---AD---LGIAVGSGSDVA--VESGD--IVLIRDDLRDVVAA 569 (645)
T ss_dssp CSSSCHHHH-HH---SS---EEEEECCCSCCS--SCCSS--SEESSCCTTHHHHH
T ss_pred CCHhHHHHH-Hh---CC---EEEEeCCCcHHH--HHhCC--EEEecCCHHHHHHH
Confidence 999999999 98 88 677777554322 23446 777 666666543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.44 E-value=6.3e-07 Score=75.79 Aligned_cols=102 Identities=8% Similarity=-0.106 Sum_probs=71.9
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcC--CCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhH
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATL 169 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~g--l~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di 169 (218)
..++..+++++...+....+.+. +. +...+..+++.. ..+|+..++.+++.++++++++++|||+.+|+
T Consensus 160 ~~~i~ki~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi 238 (285)
T 3pgv_A 160 PQGISKVFFTCEDHEHLLPLEQA-MNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDA 238 (285)
T ss_dssp CSSEEEEEEECSCHHHHHHHHHH-HHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred CCCceEEEEeCCCHHHHHHHHHH-HHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhH
Confidence 45566667776665555554443 22 223355555543 23799999999999999999999999999999
Q ss_pred HHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 170 KNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 170 ~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
+++ +. || ++|.+|...++..+.+..+ +++.+-.
T Consensus 239 ~ml-~~---ag---~~vAm~Na~~~vk~~A~~~--~v~~sn~ 271 (285)
T 3pgv_A 239 EML-SM---AG---KGCIMANAHQRLKDLHPEL--EVIGSNA 271 (285)
T ss_dssp HHH-HH---SS---EEEECTTSCHHHHHHCTTS--EECCCGG
T ss_pred HHH-Hh---cC---CEEEccCCCHHHHHhCCCC--EecccCC
Confidence 999 99 88 5777888887766655433 5655543
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.43 E-value=7.8e-07 Score=76.00 Aligned_cols=97 Identities=11% Similarity=-0.044 Sum_probs=70.5
Q ss_pred CCcEEEEcCCChHHHHHHHHHhcC--CCC-CCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHH
Q 027821 102 SSRIYIVTTKQSRFADALLRELAG--VTI-PPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLK 170 (218)
Q Consensus 102 g~~laIvTnk~~~~~~~iL~~~~g--l~~-~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~ 170 (218)
..++.+.+. .+..+.+++. +. +.. .|+.+.+.. ..+|+..++.+++.++++++++++|||+.+|++
T Consensus 182 ~~ki~~~~~--~~~~~~~~~~-l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~ 258 (304)
T 3l7y_A 182 FFKLTLQVK--EEESAQIMKA-IADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIE 258 (304)
T ss_dssp EEEEEEECC--GGGHHHHHHH-HHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred eEEEEEEcC--HHHHHHHHHH-HHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHH
Confidence 345555553 2334556655 43 555 577776654 238899999999999999999999999999999
Q ss_pred HhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 171 NVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 171 aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
++ ++ || ++|.+|..+++..+. ++ +++.+..|
T Consensus 259 m~-~~---ag---~~vam~na~~~~k~~--Ad--~v~~~~~e 289 (304)
T 3l7y_A 259 ML-KL---AK---YSYAMANAPKNVKAA--AN--YQAKSNDE 289 (304)
T ss_dssp HH-HH---CT---EEEECTTSCHHHHHH--CS--EECCCGGG
T ss_pred HH-Hh---cC---CeEEcCCcCHHHHHh--cc--EEcCCCCc
Confidence 99 99 98 567778777665443 46 88888655
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.39 E-value=3.4e-06 Score=69.58 Aligned_cols=110 Identities=10% Similarity=-0.038 Sum_probs=82.0
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC------------ceEE--------------------
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP------------DRIY-------------------- 134 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F------------d~I~-------------------- 134 (218)
+-|...++|+ ++|++++|+|+++...+..+++. +|+..++ ..++
T Consensus 23 i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~ 101 (227)
T 1l6r_A 23 ISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIF-LGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTS 101 (227)
T ss_dssp BCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSS
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHH-hCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhc
Confidence 4466778887 78999999999999999999999 8886421 1111
Q ss_pred ---------------------------------------cC---C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhh
Q 027821 135 ---------------------------------------GL---G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLAT 168 (218)
Q Consensus 135 ---------------------------------------g~---d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~D 168 (218)
+. + ..+|+..++.+++..++++.++++|||+.+|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD 181 (227)
T 1l6r_A 102 MRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNND 181 (227)
T ss_dssp CBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGG
T ss_pred CCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHh
Confidence 00 1 1388889999999988888999999999999
Q ss_pred HHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 169 LKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 169 i~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
+.++ +. +|+. +++ |...+ +++. .++ +++.+..
T Consensus 182 ~~m~-~~---ag~~-va~--~n~~~-~~k~-~a~--~v~~~~~ 213 (227)
T 1l6r_A 182 MPMF-QL---PVRK-ACP--ANATD-NIKA-VSD--FVSDYSY 213 (227)
T ss_dssp HHHH-TS---SSEE-EEC--TTSCH-HHHH-HCS--EECSCCT
T ss_pred HHHH-HH---cCce-EEe--cCchH-HHHH-hCC--EEecCCC
Confidence 9999 99 9974 444 55554 3443 345 8887753
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=5.9e-07 Score=83.63 Aligned_cols=95 Identities=15% Similarity=0.184 Sum_probs=73.9
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcC-------------CCCCCceEEcCCCCChHHH---------
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAG-------------VTIPPDRIYGLGTGPKVEV--------- 144 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~g-------------l~~~Fd~I~g~d~kpkPe~--------- 144 (218)
.=|.+..+|+ +.| ++.++||++..+++.+++.++| +.++||.|+....||..-.
T Consensus 247 kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~Vd 325 (555)
T 2jc9_A 247 KDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVD 325 (555)
T ss_dssp CCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEEE
T ss_pred CChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEee
Confidence 3478888888 889 9999999999999999999447 4578999776654544211
Q ss_pred -------------------------HHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEec
Q 027821 145 -------------------------LKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDW 188 (218)
Q Consensus 145 -------------------------l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~ 188 (218)
+..+.+..+....+++||||.. .||..+.+. +||++++|..
T Consensus 326 ~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~---~GWrTiLViP 392 (555)
T 2jc9_A 326 TKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKR---QGWRTFLVIP 392 (555)
T ss_dssp TTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHH---HCCEEEEECT
T ss_pred cCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhh---cCeEEEEEEe
Confidence 3555555666788999999997 578888338 9999999953
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.31 E-value=2.6e-07 Score=77.38 Aligned_cols=89 Identities=12% Similarity=0.040 Sum_probs=58.3
Q ss_pred CChHHHHHHHHHhcC--CCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCC
Q 027821 111 KQSRFADALLRELAG--VTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 111 k~~~~~~~iL~~~~g--l~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AG 180 (218)
...+.++.+++. +. +...++.+.+.. ...|+..++.+++.++++++++++|||+.+|++++ +. ||
T Consensus 159 ~~~~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~-~~---ag 233 (279)
T 3mpo_A 159 DYPQVIEQVKAN-MPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMI-KY---AG 233 (279)
T ss_dssp CCHHHHHHHHHH-CCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHH-HH---ST
T ss_pred CCHHHHHHHHHH-HHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHH-Hh---cC
Confidence 456667777776 53 223355555443 12699999999999999999999999999999999 99 98
Q ss_pred ceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 181 WNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 181 v~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
++|.+|.+.++..+. ++ +++.+..
T Consensus 234 ---~~vam~na~~~~k~~--A~--~v~~~~~ 257 (279)
T 3mpo_A 234 ---LGVAMGNAIDEVKEA--AQ--AVTLTNA 257 (279)
T ss_dssp ---EECBC---CCHHHHH--CS--CBC----
T ss_pred ---ceeeccCCCHHHHHh--cc--eeccCCC
Confidence 467778777655443 35 6666643
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.17 E-value=5.5e-06 Score=79.78 Aligned_cols=107 Identities=20% Similarity=0.173 Sum_probs=83.0
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.++.|++.++++ ++|+++.++|+.+...++.+.++ +|++ .+++.- ...|.+.++.+... .+++|||
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~----~~~~~~~P~~K~~~v~~l~~~-----~~v~~vG 603 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKKLQAK-----EVVAFVG 603 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCTTCHHHHHHHHTTT-----CCEEEEE
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCc----EEEccCCHHHHHHHHHHHhcC-----CeEEEEE
Confidence 578899999999 89999999999999999999999 9986 344433 45788888888764 4679999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHh
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSR 215 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~ 215 (218)
|+.||+.+- +. || +++..|.++.. ....+| +++ +++..+..
T Consensus 604 Dg~ND~~al-~~---A~---vgiamg~g~~~--a~~~AD--~vl~~~~~~~i~~ 646 (723)
T 3j09_A 604 DGINDAPAL-AQ---AD---LGIAVGSGSDV--AVESGD--IVLIRDDLRDVVA 646 (723)
T ss_dssp CSSTTHHHH-HH---SS---EEEECCCCSCC--SSCCSS--EECSSCCTTHHHH
T ss_pred CChhhHHHH-hh---CC---EEEEeCCCcHH--HHHhCC--EEEeCCCHHHHHH
Confidence 999999999 88 88 56777754432 223446 877 56665544
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.06 E-value=1.6e-05 Score=66.63 Aligned_cols=95 Identities=16% Similarity=0.072 Sum_probs=64.3
Q ss_pred CcEEEEcCCChHHHHHHHHHhcC--CCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHh
Q 027821 103 SRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 103 ~~laIvTnk~~~~~~~iL~~~~g--l~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
.++.+ .++. +.+..+++. +. +...+..+.+.. ..+|+..++.++...++++.++++|||+.+|+.++
T Consensus 146 ~ki~~-~~~~-~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~ 222 (268)
T 1nf2_A 146 TKLLL-IDTP-ERLDELKEI-LSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMF 222 (268)
T ss_dssp SEEEE-ECCH-HHHHHHHHH-HHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHH
T ss_pred eEEEE-ECCH-HHHHHHHHH-HHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHH
Confidence 44544 4433 345555544 32 233456554432 23899999999998888899999999999999999
Q ss_pred hccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 173 IKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 173 ~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
+. +|+ +|.||....+ ++.. ++ +++.+..
T Consensus 223 -~~---ag~---~v~~~n~~~~-~~~~-a~--~v~~~~~ 250 (268)
T 1nf2_A 223 -EE---AGL---RVAMENAIEK-VKEA-SD--IVTLTNN 250 (268)
T ss_dssp -TT---CSE---EEECTTSCHH-HHHH-CS--EECCCTT
T ss_pred -HH---cCC---EEEecCCCHH-HHhh-CC--EEEccCC
Confidence 99 887 5667866554 4443 56 8887744
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.6e-05 Score=71.19 Aligned_cols=114 Identities=15% Similarity=0.168 Sum_probs=80.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccc------------------cccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHH
Q 027821 59 SENRDALVDLFGKVRDEWMDKDLT------------------TWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFAD 117 (218)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~ 117 (218)
|.+.+++....+.+.+........ .+....++|||+.++++ ++|++++|||+....+++
T Consensus 173 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~ 252 (385)
T 4gxt_A 173 NYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVR 252 (385)
T ss_dssp TCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHH
Confidence 678888888887777665322111 11122458999999999 999999999999999999
Q ss_pred HHHHHhcCCCC--CCceEEcCC---------------------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhc
Q 027821 118 ALLRELAGVTI--PPDRIYGLG---------------------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 174 (218)
Q Consensus 118 ~iL~~~~gl~~--~Fd~I~g~d---------------------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k 174 (218)
.+.++ +|+.- ..+.|+|.. ...|+..++++.... .....++++|||.+|+.+- +
T Consensus 253 ~ia~~-lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~~-~~~~~i~a~GDs~~D~~ML-~ 329 (385)
T 4gxt_A 253 AFATD-TNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKND-RNYGPIMVGGDSDGDFAML-K 329 (385)
T ss_dssp HHHHC-TTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCCT-TEECCSEEEECSGGGHHHH-H
T ss_pred HHHHH-hCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHhc-CCCCcEEEEECCHhHHHHH-h
Confidence 99999 88742 224455421 013677777765442 2344569999999999998 5
Q ss_pred c
Q 027821 175 E 175 (218)
Q Consensus 175 ~ 175 (218)
+
T Consensus 330 ~ 330 (385)
T 4gxt_A 330 E 330 (385)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.88 E-value=2e-05 Score=65.44 Aligned_cols=63 Identities=11% Similarity=0.024 Sum_probs=51.7
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 139 GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 139 kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.+|+..++.+++.++++++++++|||+.+|+.++ +. || ++|.+|..+++. ++ .++ +++.+..|
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~-~~---ag---~~vam~na~~~~-k~-~Ad--~v~~~~~e 255 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPML-KA---AG---IGVAMGNASEKV-QS-VAD--FVTDTVDN 255 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH-HH---SS---EEEECTTSCHHH-HH-TCS--EECCCTTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHH-Hh---CC---CeEEeCCCcHHH-HH-hcC--EeeCCCCc
Confidence 4899999999999999999999999999999999 99 98 456677776554 43 356 88877554
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0001 Score=73.22 Aligned_cols=112 Identities=16% Similarity=0.148 Sum_probs=80.8
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce---------------------------EEcCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR---------------------------IYGLG 137 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~---------------------------I~g~d 137 (218)
.++.||+.++++ ++|+++.++|+.+...+..+.++ +|+....+. +++.-
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~-lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~ 680 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 680 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence 468899999999 89999999999999999999999 999754321 23322
Q ss_pred -CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHH
Q 027821 138 -TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFS 214 (218)
Q Consensus 138 -~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~ 214 (218)
...|-.+++.+.+. + ..+.||||+.||+.|- ++ |++-. ++ |.++. ..+ ..+| +++ +++..+.
T Consensus 681 ~P~~K~~~v~~l~~~-g---~~v~~~GDG~ND~~al-k~---Advgi-am--g~g~~-~ak-~aAd--~vl~~~~~~~i~ 745 (995)
T 3ar4_A 681 EPSHKSKIVEYLQSY-D---EITAMTGDGVNDAPAL-KK---AEIGI-AM--GSGTA-VAK-TASE--MVLADDNFSTIV 745 (995)
T ss_dssp CSSHHHHHHHHHHTT-T---CCEEEEECSGGGHHHH-HH---STEEE-EE--TTSCH-HHH-HTCS--EEETTCCHHHHH
T ss_pred CHHHHHHHHHHHHHC-C---CEEEEEcCCchhHHHH-HH---CCeEE-Ee--CCCCH-HHH-HhCC--EEECCCCHHHHH
Confidence 23556677777765 2 4578999999999999 98 88733 23 53343 222 3457 887 3466655
Q ss_pred h
Q 027821 215 R 215 (218)
Q Consensus 215 ~ 215 (218)
.
T Consensus 746 ~ 746 (995)
T 3ar4_A 746 A 746 (995)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=97.84 E-value=4.6e-05 Score=64.93 Aligned_cols=98 Identities=11% Similarity=0.078 Sum_probs=68.5
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC------------------CCChHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG------------------TGPKVEVL 145 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d------------------~kpkPe~l 145 (218)
..++.||+.++++ ++|++++|+|+.....++.++++ +|+......|++.. .-.|+.+.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~-~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHH-TTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHH-cCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 3678999999999 89999999999999999999999 99875544454432 01334443
Q ss_pred HH---HHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCC
Q 027821 146 KQ---LQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 146 ~~---l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
.+ ...... +..+++||||+.+|+-|+ +. ..-.-+++..||
T Consensus 218 ~k~~~~~~~~~-~~~~v~~vGDGiNDa~m~-k~---l~~advgiaiGf 260 (297)
T 4fe3_A 218 LKNTDYFSQLK-DNSNIILLGDSQGDLRMA-DG---VANVEHILKIGY 260 (297)
T ss_dssp HTCHHHHHHTT-TCCEEEEEESSGGGGGTT-TT---CSCCSEEEEEEE
T ss_pred HHHHHHHHhhc-cCCEEEEEeCcHHHHHHH-hC---ccccCeEEEEEe
Confidence 21 222222 456789999999999998 64 322334555564
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.76 E-value=2.3e-05 Score=71.91 Aligned_cols=94 Identities=17% Similarity=0.241 Sum_probs=70.5
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhc--------CCCCCCceEEcCCCCCh------------------
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADALLRELA--------GVTIPPDRIYGLGTGPK------------------ 141 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~--------gl~~~Fd~I~g~d~kpk------------------ 141 (218)
=|.+..+|+ ++|.++.++||++-.++..+++.++ ++.++||+|++...||.
T Consensus 188 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l 267 (470)
T 4g63_A 188 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTM 267 (470)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCCE
T ss_pred CHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCcc
Confidence 367777777 8899999999999999999999866 56799999987654332
Q ss_pred --------HHH-----HHHHHhcCCCCCCcEEEEcCChh-hHHHhhccCccCCceEEEEe
Q 027821 142 --------VEV-----LKQLQKKPELQGMTLHFVEDRLA-TLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 142 --------Pe~-----l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~k~~~~AGv~~i~V~ 187 (218)
|.+ +..+.+..+....+++||||+.. ||-.+-+. .||+|++|-
T Consensus 268 ~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~---~gWrT~~Ii 324 (470)
T 4g63_A 268 TNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKD---CNWRTALVV 324 (470)
T ss_dssp EECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHS---CCCEEEEEC
T ss_pred cccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhc---cCCeEEEEh
Confidence 111 13344444555568999999975 76666467 899999995
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.72 E-value=5.1e-05 Score=73.27 Aligned_cols=107 Identities=15% Similarity=0.185 Sum_probs=78.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.++-|++.++++ ++|+++.++|+.+...++.+.++ +|++. +++.- ...|.+.++.+..+. ..+.|||
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~-lgi~~----v~a~~~P~~K~~~v~~l~~~g----~~V~~vG 623 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGT-LGIKK----VVAEIMPEDKSRIVSELKDKG----LIVAMAG 623 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH-HTCCC----EECSCCHHHHHHHHHHHHHHS----CCEEEEE
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCE----EEEecCHHHHHHHHHHHHhcC----CEEEEEE
Confidence 467899999999 88999999999999999999999 99875 33332 225566777777653 3568999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHH
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFS 214 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~ 214 (218)
|+.||+.+- +. || +||..|.++....+. +| +++ +++..+.
T Consensus 624 DG~ND~paL-~~---Ad---vGIAmg~g~d~a~~~--AD--~vl~~~~~~~i~ 665 (736)
T 3rfu_A 624 DGVNDAPAL-AK---AD---IGIAMGTGTDVAIES--AG--VTLLHGDLRGIA 665 (736)
T ss_dssp CSSTTHHHH-HH---SS---EEEEESSSCSHHHHH--CS--EEECSCCSTTHH
T ss_pred CChHhHHHH-Hh---CC---EEEEeCCccHHHHHh--CC--EEEccCCHHHHH
Confidence 999999999 88 88 455556555444433 46 666 4444443
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00018 Score=60.68 Aligned_cols=62 Identities=16% Similarity=0.051 Sum_probs=49.9
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.|...++.+++.+++++.++++|||+.+|+.++ +. +|+ .+++.++ .+ +++.. ++ +++.+..+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~-~~---ag~-~va~~~~--~~-~~~~~-a~--~v~~~~~~ 277 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSML-EA---AGK-GVAMGNA--RE-DIKSI-AD--AVTLTNDE 277 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHH-HH---SSE-EEECTTC--CH-HHHHH-CS--EECCCGGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH-HH---cCc-EEEEcCC--CH-HHHhh-Cc--eeecCCCc
Confidence 889999999999999999999999999999999 99 998 6677543 43 44443 46 88877554
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.65 E-value=7.8e-06 Score=67.23 Aligned_cols=94 Identities=11% Similarity=-0.073 Sum_probs=71.9
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCC-CCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT-IPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~-~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
+..-||+.++|+ .+++.++|.|++.+.+++.+++. ++.. .+|+.++..+ ....+..+.+-+...+.+..+|++|+
T Consensus 58 v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~-LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiID 136 (204)
T 3qle_A 58 TAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEK-LDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIID 136 (204)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-TSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEE
T ss_pred EEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEE
Confidence 467899999999 89999999999999999999999 9987 5899876654 11112223233334455778999999
Q ss_pred CChhhHHHhhccCccCCceEEEE
Q 027821 164 DRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V 186 (218)
|++...... .. +|+.+...
T Consensus 137 Dsp~~~~~~-p~---N~I~I~~~ 155 (204)
T 3qle_A 137 TDPNSYKLQ-PE---NAIPMEPW 155 (204)
T ss_dssp SCTTTTTTC-GG---GEEECCCC
T ss_pred CCHHHHhhC-cc---CceEeeeE
Confidence 999999877 66 77766543
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=97.63 E-value=7.6e-05 Score=61.65 Aligned_cols=62 Identities=13% Similarity=0.123 Sum_probs=49.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.|...++.+++.++++++++++|||+.+|+.++ +. ||+.+ .+|...+ +++. .++ +++.+..+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml-~~---ag~~v---am~na~~-~~k~-~A~--~v~~~~~~ 244 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEML-SF---VGTGV---AMGNAHE-EVKR-VAD--FVTKPVDK 244 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHH-HH---SSEEE---EETTCCH-HHHH-TCS--EEECCGGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHH-Hh---CCcEE---EeCCCcH-HHHH-hCC--EEeCCCCc
Confidence 788999999999999999999999999999999 99 99743 3575554 4544 356 88877654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.54 E-value=8.8e-05 Score=62.57 Aligned_cols=62 Identities=10% Similarity=-0.033 Sum_probs=48.9
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+|+..++.+++..++++.++++|||+.+|+.++ +. +|+ +|.+|...+ +++. .++ +++.+..+
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~-~~---ag~---~va~~n~~~-~~~~-~a~--~v~~~~~~ 259 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMI-EY---AGV---GVAVDNAIP-SVKE-VAN--FVTKSNLE 259 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-HH---SSE---EEECTTSCH-HHHH-HCS--EECCCTTT
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHH-HH---CCc---EEEecCCcH-HHHh-hCC--EEecCCCc
Confidence 899999999999888889999999999999999 99 997 344565554 3444 345 88877544
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00017 Score=59.66 Aligned_cols=63 Identities=8% Similarity=-0.132 Sum_probs=49.3
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhc------cCCCCeEEcChhH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA------ASIPRIQLLQLSD 212 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a------~~~p~~~~~~~~~ 212 (218)
+|+..++.+++.+++++.++++|||+.+|+.+. +. +|+ +|..|...+ +++.. .++ +++.+..+
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~-~~---~g~---~va~~na~~-~~k~~a~~~~~~a~--~v~~~~~~ 230 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLF-ET---SAR---GVIVRNAQP-ELLHWYDQWGDSRH--YRAQSSHA 230 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH-TS---SSE---EEECTTCCH-HHHHHHHHHCCTTE--EECSSCHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHH-hc---cCc---EEEEcCCcH-HHHHHHhcccccce--eecCCcch
Confidence 899999999999998899999999999999999 88 887 344465554 44443 245 88876554
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00045 Score=59.07 Aligned_cols=61 Identities=11% Similarity=0.058 Sum_probs=47.9
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc-Chh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL-QLS 211 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~-~~~ 211 (218)
+|+..++.++..+++++.++++|||+.+|+.++ +. +|+. ++ +|...+ +++. .++ +++. +..
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~-~~---ag~~-va--~~na~~-~~k~-~a~--~v~~~~~~ 285 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAML-SN---FKYS-FA--VANATD-SAKS-HAK--CVLPVSHR 285 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH-HS---CSEE-EE--CTTCCH-HHHH-HSS--EECSSCTT
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH-HH---cCCe-EE--EcCCcH-HHHh-hCC--EEEccCCC
Confidence 899999999999998999999999999999999 99 9973 44 455554 3443 345 8877 643
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00019 Score=62.08 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=68.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC------------------------CCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG------------------------TGP 140 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d------------------------~kp 140 (218)
..+++++.++|+ + |++++|+|++...++...++. +++. +.+.+.. .++
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 176 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASM-IGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLS 176 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH-TTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchh-hhhh---hhhcccccchhhhccccccceeEEecCHHHHhhh
Confidence 357999999999 6 999999999998888888887 7763 3333221 011
Q ss_pred h---------------HHHHH------------HHHhcCCCCCCc----EEEEcCChhhHHHhhccCccC----CceEEE
Q 027821 141 K---------------VEVLK------------QLQKKPELQGMT----LHFVEDRLATLKNVIKEPELD----GWNLYL 185 (218)
Q Consensus 141 k---------------Pe~l~------------~l~~~~~~~~~e----~l~IGDs~~Di~aA~k~~~~A----Gv~~i~ 185 (218)
. |..+. ..+. ++++.+ +++|||+.+|+.++ +. | |+. |+
T Consensus 177 ~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--gi~~~~~~~~via~GDs~NDi~ml-~~---A~~~~g~~-va 249 (332)
T 1y8a_A 177 GEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--GYCESKGIDFPVVVGDSISDYKMF-EA---ARGLGGVA-IA 249 (332)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--HHHHHHTCSSCEEEECSGGGHHHH-HH---HHHTTCEE-EE
T ss_pred hHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--ccChhhcCceEEEEeCcHhHHHHH-HH---HhhcCCeE-EE
Confidence 1 12221 0111 234556 89999999999999 99 9 985 45
Q ss_pred EecCCCCHHHHHhccCCCCeEEcCh
Q 027821 186 GDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 186 V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
+ .+ . ++++. .++ +++.+.
T Consensus 250 m-na--~-~~lk~-~Ad--~v~~~~ 267 (332)
T 1y8a_A 250 F-NG--N-EYALK-HAD--VVIISP 267 (332)
T ss_dssp E-SC--C-HHHHT-TCS--EEEECS
T ss_pred e-cC--C-HHHHh-hCc--EEecCC
Confidence 5 43 3 44443 456 888773
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00056 Score=56.60 Aligned_cols=62 Identities=13% Similarity=-0.036 Sum_probs=48.6
Q ss_pred ChHHHHHHHHHhcCCCCCCceEEcCC------CCChHHHHHHHHhcCCCCC--CcEEEEcCChhhHHHhhccCccCCce
Q 027821 112 QSRFADALLRELAGVTIPPDRIYGLG------TGPKVEVLKQLQKKPELQG--MTLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 112 ~~~~~~~iL~~~~gl~~~Fd~I~g~d------~kpkPe~l~~l~~~~~~~~--~e~l~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
....+...++. .+ |+.+.+.. ..+|+..++.+++.+++++ .++++|||+.+|+.++ +. +|+.
T Consensus 147 ~~~~~~~~l~~-~~----~~~~~s~~~~ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~-~~---ag~~ 216 (259)
T 3zx4_A 147 EVEAVLEALEA-VG----LEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLF-RA---VDLA 216 (259)
T ss_dssp THHHHHHHHHH-TT----CEEEECSSSEEEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHH-HT---SSEE
T ss_pred HHHHHHHHHHH-CC----cEEEecCceEEEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHH-Hh---CCCe
Confidence 45566666766 54 45555442 2588999999999999887 9999999999999999 99 9964
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.13 E-value=7.5e-05 Score=61.95 Aligned_cols=65 Identities=14% Similarity=-0.096 Sum_probs=49.1
Q ss_pred CCChHHHHHHHHhcCCC-CCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 138 TGPKVEVLKQLQKKPEL-QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~-~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.-.|...++.+++.+++ ++.++++|||+.+|+.+. +. +|+ +|.+|.+..++++. .++ ++++++.+
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml-~~---ag~---~va~gna~~~~~~~-~a~--~v~~~~~~ 242 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMF-EV---VDK---VFIVGSLKHKKAQN-VSS--IIDVLEVI 242 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHH-TT---SSE---EEEESSCCCTTEEE-ESS--HHHHHHHH
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHH-Hh---CCc---EEEeCCCCccccch-hce--EEeccccc
Confidence 34888899988888766 788999999999999999 98 886 45566666445544 345 77766654
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00039 Score=58.46 Aligned_cols=53 Identities=8% Similarity=-0.117 Sum_probs=39.6
Q ss_pred ChHHHHHHHHhcCC-CCCCc--EEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 140 PKVEVLKQLQKKPE-LQGMT--LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 140 pkPe~l~~l~~~~~-~~~~e--~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
+|+..++.++..++ ++..+ +++|||+.+|+.+. +. +|+ .|++.++....++++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~-~~---ag~-~va~~n~~~~~~~~~ 244 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLL-EV---MDY-AVIVKGLNREGVHLH 244 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHH-HT---SSE-EEECCCCC-------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHH-Hh---CCc-eEEecCCCccchhhc
Confidence 88999988888777 67777 99999999999999 98 997 477777764444543
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0084 Score=59.79 Aligned_cols=106 Identities=16% Similarity=0.251 Sum_probs=73.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC------------------------c---------
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP------------------------D--------- 131 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F------------------------d--------- 131 (218)
.++-|++.++++ ++|+++.++|+.+...+..+.++ +|+...- .
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~ 676 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK 676 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHT
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhh
Confidence 467899999999 89999999999999999999999 9996320 1
Q ss_pred ----------------eEEcCCC-CChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCC-CCH
Q 027821 132 ----------------RIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY-NTQ 193 (218)
Q Consensus 132 ----------------~I~g~d~-kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~-~~~ 193 (218)
.+++.-. ..|-.+++.+.+. + ..+.||||+.||+.|= +. |++-+ .-|. ++.
T Consensus 677 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g---~~V~~iGDG~ND~paL-k~---AdvGI---Amg~~gtd 745 (1028)
T 2zxe_A 677 DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-G---AIVAVTGDGVNDSPAL-KK---ADIGV---AMGISGSD 745 (1028)
T ss_dssp TCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-T---CCEEEEECSGGGHHHH-HH---SSEEE---EESSSCCH
T ss_pred hCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-C---CEEEEEcCCcchHHHH-Hh---CCceE---EeCCccCH
Confidence 1333221 1344455666553 2 3568999999999999 98 88643 3353 444
Q ss_pred HHHHhccCCCCeEEcC
Q 027821 194 KEREEAASIPRIQLLQ 209 (218)
Q Consensus 194 ~~l~~a~~~p~~~~~~ 209 (218)
... + .+| +++.+
T Consensus 746 ~ak-~-aAD--~Vl~~ 757 (1028)
T 2zxe_A 746 VSK-Q-AAD--MILLD 757 (1028)
T ss_dssp HHH-H-HCS--EEETT
T ss_pred HHH-H-hcC--EEecC
Confidence 333 3 346 77644
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00081 Score=59.91 Aligned_cols=79 Identities=14% Similarity=0.126 Sum_probs=60.5
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCC-CCc-eEEcCCCCChHHHHHHHHhc-CCCCCCcEE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPD-RIYGLGTGPKVEVLKQLQKK-PELQGMTLH 160 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~-~Fd-~I~g~d~kpkPe~l~~l~~~-~~~~~~e~l 160 (218)
..+.+.||+.++|+ .+++.++|.|++.+.+++.+++. ++... +|+ .+++.+.-+. .+.+-+.. .+.+..+++
T Consensus 72 ~~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~-LDp~~~~f~~ri~sr~~~g~--~~~KdL~~L~~~dl~~vi 148 (372)
T 3ef0_A 72 YYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGS--LAQKSLRRLFPCDTSMVV 148 (372)
T ss_dssp EEEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HCTTSCSSSSCEECTTTSSC--SSCCCGGGTCSSCCTTEE
T ss_pred EEEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHH-hccCCceeeeEEEEecCCCC--cceecHHHhcCCCCceEE
Confidence 34678899999999 89999999999999999999999 99987 887 6887652111 11111222 244678899
Q ss_pred EEcCChh
Q 027821 161 FVEDRLA 167 (218)
Q Consensus 161 ~IGDs~~ 167 (218)
+|+|++.
T Consensus 149 iiDd~~~ 155 (372)
T 3ef0_A 149 VIDDRGD 155 (372)
T ss_dssp EEESCSG
T ss_pred EEeCCHH
Confidence 9999995
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0064 Score=60.64 Aligned_cols=39 Identities=26% Similarity=0.333 Sum_probs=36.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
.++-|++.++++ ++|+++.++|+.+...+..+.++ +|+.
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~-lgi~ 644 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAAS-VGII 644 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCC
Confidence 468899999999 89999999999999999999999 9994
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0083 Score=59.24 Aligned_cols=105 Identities=13% Similarity=0.081 Sum_probs=74.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC-c------------------------eEEcCC-C
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP-D------------------------RIYGLG-T 138 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F-d------------------------~I~g~d-~ 138 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +|+.... + .|++.- .
T Consensus 534 Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~-lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P 612 (920)
T 1mhs_A 534 DPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQ-LGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP 612 (920)
T ss_dssp CCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHH-HTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCS
T ss_pred ccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHH-cCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCH
Confidence 367889999999 89999999999999999999999 9996321 0 123322 2
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc
Q 027821 139 GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL 208 (218)
Q Consensus 139 kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~ 208 (218)
..|-..++.+... + ..+.|+||+.||.-|= +. |++-. ++ |.++. ..++ .+| +++.
T Consensus 613 ~~K~~iV~~Lq~~-g---~~Vam~GDGvNDapaL-k~---AdvGI-Am--g~gtd-~ak~-aAD--iVl~ 667 (920)
T 1mhs_A 613 QHKYNVVEILQQR-G---YLVAMTGDGVNDAPSL-KK---ADTGI-AV--EGSSD-AARS-AAD--IVFL 667 (920)
T ss_dssp THHHHHHHHHHTT-T---CCCEECCCCGGGHHHH-HH---SSEEE-EE--TTSCH-HHHH-SSS--EEES
T ss_pred HHHHHHHHHHHhC-C---CeEEEEcCCcccHHHH-Hh---CCcCc-cc--ccccH-HHHH-hcC--eEEc
Confidence 3566677777764 3 3458999999999999 88 88633 33 43443 3232 456 7663
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0023 Score=55.93 Aligned_cols=110 Identities=9% Similarity=0.112 Sum_probs=72.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhccccc---------ccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhc--
Q 027821 59 SENRDALVDLFGKVRDEWMDKDLTT---------WIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELA-- 124 (218)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~-- 124 (218)
|.+.+++.+..+++.+......... .....++||++.++++ ++|++++|||.+++..++.+-.. .
T Consensus 104 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~-~~~ 182 (327)
T 4as2_A 104 GFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAAD-PRY 182 (327)
T ss_dssp TSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTC-GGG
T ss_pred CCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhh-ccc
Confidence 7788887777766655421100000 0112368999999999 89999999999999999998876 4
Q ss_pred CCCCCCceEEcCC-------------------------------------------CCChHHHHHHHHhcCCCCCCcEEE
Q 027821 125 GVTIPPDRIYGLG-------------------------------------------TGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 125 gl~~~Fd~I~g~d-------------------------------------------~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
|..-.-+.|+|+. ...||..+.+.+..-. .+. ++
T Consensus 183 ~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~-~Pi--~a 259 (327)
T 4as2_A 183 GYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWK-RPI--LV 259 (327)
T ss_dssp SCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSC-CCS--EE
T ss_pred ccCCCHHHeEeeeeeeeccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHhhCC-CCe--EE
Confidence 3333345566532 1136777766654332 343 89
Q ss_pred EcCC-hhhHHHh
Q 027821 162 VEDR-LATLKNV 172 (218)
Q Consensus 162 IGDs-~~Di~aA 172 (218)
+||| ..|+.+=
T Consensus 260 ~Gns~dgD~~ML 271 (327)
T 4as2_A 260 AGDTPDSDGYML 271 (327)
T ss_dssp EESCHHHHHHHH
T ss_pred ecCCCCCCHHHH
Confidence 9999 5787654
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.20 E-value=0.042 Score=53.99 Aligned_cols=86 Identities=13% Similarity=0.135 Sum_probs=63.8
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC-C--ce-----------------------EEcCC-
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP-P--DR-----------------------IYGLG- 137 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~-F--d~-----------------------I~g~d- 137 (218)
.++-|++.++++ ++|+++.++|+.+...+..+-++ +|+..- + +. |++.-
T Consensus 487 Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~-lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~ 565 (885)
T 3b8c_A 487 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVF 565 (885)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHT-TTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCC
T ss_pred cccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHH-hCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEEC
Confidence 467889999999 89999999999999999999999 999531 0 01 22221
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCce
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
...|-..++.+... + ..+.|+||..||+-|= +. |++-
T Consensus 566 P~~K~~iV~~lq~~-g---~~Vam~GDGvNDapaL-k~---AdvG 602 (885)
T 3b8c_A 566 PEHKYEIVKKLQER-K---HIVGMTGDGVNDAPAL-KK---ADIG 602 (885)
T ss_dssp HHHHHHHHHHHHHT-T---CCCCBCCCSSTTHHHH-HH---SSSC
T ss_pred HHHHHHHHHHHHHC-C---CeEEEEcCCchhHHHH-Hh---CCEe
Confidence 12355566777764 3 2346999999999998 88 8863
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=93.92 E-value=0.0069 Score=52.78 Aligned_cols=90 Identities=12% Similarity=0.137 Sum_probs=63.6
Q ss_pred CCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce----EEcCCC------CChH----HHHHHHHh-cC
Q 027821 90 FYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDR----IYGLGT------GPKV----EVLKQLQK-KP 152 (218)
Q Consensus 90 l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~----I~g~d~------kpkP----e~l~~l~~-~~ 152 (218)
.-||+.++|+ .+.+.++|.|++.+.+++.+++. ++....++. +...+. ...+ .-+..+-. -+
T Consensus 165 ~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~-Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p 243 (320)
T 3shq_A 165 MRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRL-LGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYK 243 (320)
T ss_dssp BCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHH-TTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCT
T ss_pred eCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccC
Confidence 5699999999 88999999999999999999999 988765432 222211 1111 11233311 12
Q ss_pred CCCCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 153 ELQGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
+.+..++++|+|++.-.... .. +|+.+.
T Consensus 244 ~rdl~~tIiIDdsp~~~~~~-p~---NgI~I~ 271 (320)
T 3shq_A 244 QYNSSNTIMFDDIRRNFLMN-PK---SGLKIR 271 (320)
T ss_dssp TCCGGGEEEEESCGGGGTTS-GG---GEEECC
T ss_pred CCChhHEEEEeCChHHhccC-cC---ceEEeC
Confidence 44678899999999998888 76 776554
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.78 E-value=0.062 Score=48.80 Aligned_cols=78 Identities=15% Similarity=0.132 Sum_probs=57.5
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCC-CCce-EEcCCCCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDR-IYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~-~Fd~-I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
+..-||+.++|+ .+.+.++|.|+..+.++..+++. ++... +|.. +++.+.-.. ...+.+..-++.+...+++|+
T Consensus 82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~-LDp~~~~f~~Rl~sRd~cg~-~~~KdL~~ll~rdl~~vvIID 159 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGS-LAQKSLRRLFPCDTSMVVVID 159 (442)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-HCTTSTTTTTCEECTTTSSC-SSCCCGGGTCSSCCTTEEEEE
T ss_pred EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-hccCCccccceEEEecCCCC-ceeeehHHhcCCCcceEEEEE
Confidence 567899999999 89999999999999999999999 99886 7875 776551110 001112212234567889999
Q ss_pred CChh
Q 027821 164 DRLA 167 (218)
Q Consensus 164 Ds~~ 167 (218)
|++.
T Consensus 160 d~p~ 163 (442)
T 3ef1_A 160 DRGD 163 (442)
T ss_dssp SCSG
T ss_pred CCHH
Confidence 9984
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=93.19 E-value=0.57 Score=39.45 Aligned_cols=81 Identities=14% Similarity=0.089 Sum_probs=63.4
Q ss_pred hCCCcEEEEcCCChH-HHHHHHHHhcCCCCCCc--eEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccC
Q 027821 100 FASSRIYIVTTKQSR-FADALLRELAGVTIPPD--RIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 176 (218)
Q Consensus 100 ~~g~~laIvTnk~~~-~~~~iL~~~~gl~~~Fd--~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~ 176 (218)
+.+.--++||+..-- .+-.+|= +||+.+|. -||++..-.|-..++++.++++ ....-++|||..---+|| |.
T Consensus 174 r~~~vNVLVTs~qLVPaLaK~LL--ygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eEe~AA-k~- 248 (274)
T 3geb_A 174 RPNCVNVLVTTTQLIPALAKVLL--YGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEEEQGA-KK- 248 (274)
T ss_dssp STTEEEEEEESSCHHHHHHHHHH--TTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHHHHHH-HH-
T ss_pred CCceeEEEEecCchHHHHHHHHH--hhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHHHHHH-HH-
Confidence 566667777776643 3333443 69988885 4888874579999999999998 566889999999999999 99
Q ss_pred ccCCceEEEEe
Q 027821 177 ELDGWNLYLGD 187 (218)
Q Consensus 177 ~~AGv~~i~V~ 187 (218)
.+++++-+.
T Consensus 249 --~n~PFwrI~ 257 (274)
T 3geb_A 249 --HNMPFWRIS 257 (274)
T ss_dssp --TTCCEEECC
T ss_pred --cCCCeEEee
Confidence 999998874
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=91.92 E-value=0.22 Score=41.16 Aligned_cols=48 Identities=25% Similarity=0.421 Sum_probs=40.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcC---CChHHHHHHHHHhcCCC-CCCceEEcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTT---KQSRFADALLRELAGVT-IPPDRIYGL 136 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTn---k~~~~~~~iL~~~~gl~-~~Fd~I~g~ 136 (218)
..++|++.++|+ ++|++++++|| +....+...+++ +|+. ..++.++++
T Consensus 29 ~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~-lg~~~~~~~~ii~~ 83 (284)
T 2hx1_A 29 NGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHK-LGLFSITADKIISS 83 (284)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-TTCTTCCGGGEEEH
T ss_pred CeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHH-CCcCCCCHhhEEcH
Confidence 457899999998 89999999998 677788888999 9998 777777765
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=90.59 E-value=0.11 Score=42.72 Aligned_cols=40 Identities=15% Similarity=-0.056 Sum_probs=34.6
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcC----ChhhHHHhhccCccCCceEEEE
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVED----RLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGD----s~~Di~aA~k~~~~AGv~~i~V 186 (218)
.|...++.+ .+++.++++.||| +.||+.+- +. +|...++|
T Consensus 197 sKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml-~~---~~~~g~av 240 (262)
T 2fue_A 197 DKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIF-AD---PRTVGHSV 240 (262)
T ss_dssp STTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHH-HS---TTSEEEEC
T ss_pred CHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHH-hc---CccCcEEe
Confidence 677888888 6778899999999 99999999 98 88767777
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=90.21 E-value=0.35 Score=42.32 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=38.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCC----hHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQ----SRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~----~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
..++||+.++|+ ++|++++++||++ ++.++.+-+. +|+.-..+.|+++-
T Consensus 28 ~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~-lgi~~~~~~i~ts~ 83 (352)
T 3kc2_A 28 KKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSK-LDVDVSPLQIIQSH 83 (352)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHH-HTSCCCGGGEECTT
T ss_pred CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHh-cCCCCChhhEeehH
Confidence 468899999998 8999999999975 3444444447 89987778888764
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=89.46 E-value=0.42 Score=39.04 Aligned_cols=83 Identities=16% Similarity=0.276 Sum_probs=51.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHH---HHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~---~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
..++|++.++|+ ++|++++++||+.... ...-|+. +|+...++.++++.. .....+.... ...++++
T Consensus 16 ~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~-lg~~~~~~~i~~~~~----~~~~~l~~~~--~~~~v~v 88 (263)
T 1zjj_A 16 NRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLK-MGIDVSSSIIITSGL----ATRLYMSKHL--DPGKIFV 88 (263)
T ss_dssp TEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHT-TTCCCCGGGEEEHHH----HHHHHHHHHS--CCCCEEE
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEEecHH----HHHHHHHHhC--CCCEEEE
Confidence 345699999998 7899999999977543 3344455 688765666665431 1122222222 2246688
Q ss_pred EcCChhhHHHhhccCccCCce
Q 027821 162 VEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~ 182 (218)
||+. .....+ +. .|+.
T Consensus 89 iG~~-~l~~~l-~~---~G~~ 104 (263)
T 1zjj_A 89 IGGE-GLVKEM-QA---LGWG 104 (263)
T ss_dssp ESCH-HHHHHH-HH---HTSC
T ss_pred EcCH-HHHHHH-HH---cCCe
Confidence 8884 445555 66 6664
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=88.28 E-value=0.94 Score=36.63 Aligned_cols=50 Identities=8% Similarity=0.060 Sum_probs=38.3
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC--CceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD--GWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A--Gv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
.|...++.+++.++ +++|||+.+|+.+= +. + |. .|++.-+ ...++ +++.+
T Consensus 160 ~Kg~al~~l~~~~g-----via~GD~~ND~~Ml-~~---a~~g~-~vam~Na--------~~~A~--~v~~~ 211 (239)
T 1u02_A 160 NKGSAIRSVRGERP-----AIIAGDDATDEAAF-EA---NDDAL-TIKVGEG--------ETHAK--FHVAD 211 (239)
T ss_dssp CHHHHHHHHHTTSC-----EEEEESSHHHHHHH-HT---TTTSE-EEEESSS--------CCCCS--EEESS
T ss_pred CHHHHHHHHHhhCC-----eEEEeCCCccHHHH-HH---hhCCc-EEEECCC--------CCcce--EEeCC
Confidence 78889999998876 79999999999999 88 8 74 4555333 12345 88877
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=85.84 E-value=0.97 Score=34.45 Aligned_cols=70 Identities=19% Similarity=0.163 Sum_probs=42.5
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCCh---HHHHHHHHHhcCCCCCCceEEcCCCCChHHHH-HHHHhcCCCCCCcEEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGLGTGPKVEVL-KQLQKKPELQGMTLHF 161 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~---~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l-~~l~~~~~~~~~e~l~ 161 (218)
.+.|++.++|+ ++|++++|+|+++. ..+...+++ +|+. ++.|.. . .|.-..+ .....+++ +. +|
T Consensus 24 ~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~-~gi~--~~~I~~-n-~P~~~~~~~~~~rK~~--~~--~f 94 (142)
T 2obb_A 24 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-RGLE--FYAANK-D-YPEEERDHQGFSRKLK--AD--LF 94 (142)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-TTCC--CSEESS-S-STTC---CCSCCSSCC--CS--EE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHH-cCCC--eEEEEc-C-CchhhhcchhhcCCcC--CC--EE
Confidence 46789999999 89999999999984 445555667 7774 454422 1 1211111 12233333 33 79
Q ss_pred EcCChh
Q 027821 162 VEDRLA 167 (218)
Q Consensus 162 IGDs~~ 167 (218)
|+|+..
T Consensus 95 IDDR~~ 100 (142)
T 2obb_A 95 IDDRNV 100 (142)
T ss_dssp ECTTST
T ss_pred eecccc
Confidence 999653
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=83.59 E-value=1 Score=36.50 Aligned_cols=45 Identities=7% Similarity=0.074 Sum_probs=35.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcC---CChHHHHHHHHHhcCCCCCCceEEc
Q 027821 90 FYPGIPDALK---FASSRIYIVTT---KQSRFADALLRELAGVTIPPDRIYG 135 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTn---k~~~~~~~iL~~~~gl~~~Fd~I~g 135 (218)
+.|++.++|+ ++|++++++|| ++...+...++. +|+....+.+++
T Consensus 23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~-lg~~~~~~~ii~ 73 (266)
T 3pdw_A 23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS-FDIPATEEQVFT 73 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHH-TTCCCCGGGEEE
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCHHHccC
Confidence 4567788888 89999999998 666778888998 999766666654
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=83.11 E-value=1.4 Score=36.79 Aligned_cols=49 Identities=16% Similarity=0.335 Sum_probs=38.3
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcC---CChHHHHHHHHHhcCCC-CCCceEEc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTT---KQSRFADALLRELAGVT-IPPDRIYG 135 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTn---k~~~~~~~iL~~~~gl~-~~Fd~I~g 135 (218)
....++|++.++|+ ++|++++++|| ++.......++. +|+. ...+.+++
T Consensus 34 ~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~-~g~~~~~~~~i~~ 89 (306)
T 2oyc_A 34 NGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFAR-LGFGGLRAEQLFS 89 (306)
T ss_dssp ETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-TTCCSCCGGGEEE
T ss_pred cCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHh-cCCCcCChhhEEc
Confidence 33568899999998 89999999997 566777788888 8987 44555553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 218 | |||
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.93 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.92 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.91 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.91 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.91 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.88 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.88 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.87 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.83 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.82 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.81 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.81 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.8 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.79 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.78 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.78 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.77 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.74 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.67 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.67 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.65 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.63 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.57 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.56 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.55 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.54 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.44 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.37 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.3 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.24 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.2 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.0 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.79 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.02 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 97.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.89 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.75 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.61 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 97.51 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.37 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 97.09 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.09 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 96.39 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 96.19 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 96.16 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 96.02 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 95.92 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 95.5 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 95.47 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 95.12 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 95.01 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 93.8 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 92.91 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 91.07 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 89.05 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 83.03 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 80.95 |
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.93 E-value=1.6e-25 Score=180.13 Aligned_cols=166 Identities=17% Similarity=0.224 Sum_probs=139.4
Q ss_pred hHHHHHhhhc--cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH--hCCCcEEEEcCCChHH
Q 027821 40 VEGILENWSK--IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTTKQSRF 115 (218)
Q Consensus 40 ~~~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~ 115 (218)
..+.++.+.| ....+... ++.+........+.+.+.... .....++||+.++|+ +.+++++|+||++...
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~ 112 (210)
T d2ah5a1 39 DAKTIRGFMGPPLESSFATC--LSKDQISEAVQIYRSYYKAKG----IYEAQLFPQIIDLLEELSSSYPLYITTTKDTST 112 (210)
T ss_dssp CHHHHHHTSSSCHHHHHHTT--SCGGGHHHHHHHHHHHHHHTG----GGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHH
T ss_pred CHHHHHHhhhcchhhhcccc--ccchhhHHHHHHHHHHHHhhh----hhcccchhHHHHHHhhhhcccchhhcccccchh
Confidence 4555677777 33333332 344455666677777775554 566789999999999 6778999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEcCC--CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCH
Q 027821 116 ADALLRELAGVTIPPDRIYGLG--TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ 193 (218)
Q Consensus 116 ~~~iL~~~~gl~~~Fd~I~g~d--~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~ 193 (218)
++.+|++ +|+..+||.|++++ .+|||+++..+++++++++.+++|||||.+|+.+| ++ +|+++|+|.||++..
T Consensus 113 ~~~~l~~-~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa-~~---aGi~~i~v~~g~~~~ 187 (210)
T d2ah5a1 113 AQDMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGA-RE---TGIQKLAITWGFGEQ 187 (210)
T ss_dssp HHHHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHH-HH---HTCEEEEESSSSSCH
T ss_pred hhHHHHh-hcccccccccccccccccccccccchhhhhhhcccccceeecCCHHHHHHH-HH---cCCeEEEEcCCCCCH
Confidence 9999999 99999999998876 56999999999999999999999999999999999 99 999999999999999
Q ss_pred HHHHhccCCCCeEEcChhHHHhhcC
Q 027821 194 KEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 194 ~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
+++..+.|+ ++++++.||.++|.
T Consensus 188 ~~l~~~~pd--~vi~~l~el~~~le 210 (210)
T d2ah5a1 188 ADLLNYQPD--YIAHKPLEVLAYFQ 210 (210)
T ss_dssp HHHHTTCCS--EEESSTTHHHHHTC
T ss_pred HHHHhCCCC--EEECCHHHHHHHhC
Confidence 988877655 99999999998874
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.92 E-value=2.2e-25 Score=179.60 Aligned_cols=165 Identities=12% Similarity=0.162 Sum_probs=136.0
Q ss_pred CCChHHHHHhhhccHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH--hCCCcEEEEcCCChH
Q 027821 37 GLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTTKQSR 114 (218)
Q Consensus 37 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~--~~g~~laIvTnk~~~ 114 (218)
..+.++..+.+.+.....+...+.+....+.....+.+.+.+. ....++|||+.++|+ +++++++|+||+...
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~ 109 (207)
T d2hdoa1 35 PFSPAQAQKTFPMAAEQAMTELGIAASEFDHFQAQYEDVMASH-----YDQIELYPGITSLFEQLPSELRLGIVTSQRRN 109 (207)
T ss_dssp CCCHHHHHHHTTSCHHHHHHHTTCCGGGHHHHHHHHHHHHTTC-----GGGCEECTTHHHHHHHSCTTSEEEEECSSCHH
T ss_pred CCCHHHHHHHhcchhhhhhhccccchhhHHHHHHHhhhhhccc-----ccccccccchhhhhhhhccccccccccccccc
Confidence 3456666666666544445555665555566666666665333 456789999999999 778999999999999
Q ss_pred HHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCC
Q 027821 115 FADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 115 ~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
.++.+|++ +|+..+|+.+++++ .||+|+++..++++.++++.+|+|||||.+|+++| ++ +|+.+|+|.||+
T Consensus 110 ~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a-~~---aG~~~i~v~~g~ 184 (207)
T d2hdoa1 110 ELESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTA-QA---ANVDFGLAVWGM 184 (207)
T ss_dssp HHHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHH-HH---HTCEEEEEGGGC
T ss_pred cccccccc-ccccccccccccccccccchhhhhhhcccccceeeeccceeEecCCHHHHHHH-HH---cCCeEEEEecCC
Confidence 99999999 99999999999875 57999999999999999999999999999999999 99 999999999999
Q ss_pred CCHHHHHhccCCCCeEEcChhHHHh
Q 027821 191 NTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 191 ~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
.+..++. .++ ++++++.||++
T Consensus 185 ~~~~~~~--~~~--~~i~~l~dll~ 205 (207)
T d2hdoa1 185 DPNADHQ--KVA--HRFQKPLDILE 205 (207)
T ss_dssp CTTGGGS--CCS--EEESSGGGGGG
T ss_pred CChhHhh--hcC--cEeCCHHHHHh
Confidence 8877654 335 89999999975
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.91 E-value=4.4e-24 Score=177.06 Aligned_cols=145 Identities=10% Similarity=0.036 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC-ceEEcCC
Q 027821 62 RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGLG 137 (218)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F-d~I~g~d 137 (218)
..........+.+.|.+.. .....++||+.++|+ ++|++++|+||.++..++.+|++ +|+..+| |.+++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~-~~l~~~f~d~~~~~d 150 (257)
T d1swva_ 76 EADIQEMYEEFEEILFAIL----PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKE-AALQGYKPDFLVTPD 150 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHG----GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGG
T ss_pred HHHHHHHHHHHHHHHHHHh----hccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHH-Hhhcccccccccccc
Confidence 3445556666666665443 556789999999999 78999999999999999999999 9999987 7887765
Q ss_pred ----CCChHHHHHHHHhcCCCC-CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC----HH--------------
Q 027821 138 ----TGPKVEVLKQLQKKPELQ-GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT----QK-------------- 194 (218)
Q Consensus 138 ----~kpkPe~l~~l~~~~~~~-~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~----~~-------------- 194 (218)
.||+|+++..++.++++. +++|+||||+.+|+++| ++ |||.+|+|.||++. .+
T Consensus 151 ~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA-~~---aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 226 (257)
T d1swva_ 151 DVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEG-RN---AGMWTVGVILGSSELGLTEEEVENMDSVELREKI 226 (257)
T ss_dssp GSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHH-HH---TTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHH
T ss_pred cccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHH-HH---CCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHH
Confidence 579999999999999874 58899999999999999 99 99999999999853 22
Q ss_pred -----HHHhccCCCCeEEcChhHHHhhc
Q 027821 195 -----EREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 195 -----~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+..++|| |+++++.||..-+
T Consensus 227 ~~~~~~l~~~gad--~vi~~l~eL~~ii 252 (257)
T d1swva_ 227 EVVRNRFVENGAH--FTIETMQELESVM 252 (257)
T ss_dssp HHHHHHHHHTTCS--EEESSGGGHHHHH
T ss_pred HHHHHHHHhCCCC--EEECCHHHHHHHH
Confidence 23344455 9999999998654
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.91 E-value=1.3e-23 Score=169.39 Aligned_cols=126 Identities=17% Similarity=0.217 Sum_probs=116.0
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
....++|||+.++|+ +.|++++|+||.++..++.+|++ +||..+|+.+++++ .||+|+++..++...++++.
T Consensus 91 ~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~ 169 (224)
T d2hsza1 91 CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPK 169 (224)
T ss_dssp TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGG
T ss_pred ccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHh-cCchhhccccccccccccccccchhhHHHHHHhhhhhh
Confidence 556789999999999 88999999999999999999999 99999999998876 57999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+|+||||+.+|+++| ++ +|+.+|+|.||+++..++...+|+ ++++++.||++-+
T Consensus 170 ~~~~igD~~~Di~~A-~~---aG~~~i~v~~g~~~~~~l~~~~~d--~~v~~l~dL~~ii 223 (224)
T d2hsza1 170 QILFVGDSQNDIFAA-HS---AGCAVVGLTYGYNYNIPIAQSKPD--WIFDDFADILKIT 223 (224)
T ss_dssp GEEEEESSHHHHHHH-HH---HTCEEEEESSSCSTTCCGGGGCCS--EEESSGGGGGGGT
T ss_pred ccchhcCcHHHHHHH-HH---cCCeEEEEeCCCCCcchhhhcCCC--EEECCHHHHHHhh
Confidence 999999999999999 99 999999999999988887776656 9999999998754
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.91 E-value=4.4e-24 Score=174.08 Aligned_cols=124 Identities=10% Similarity=-0.018 Sum_probs=107.3
Q ss_pred cCCCCCChHHHHH---hCC-CcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHH-HH--hcCCCC
Q 027821 87 ANRFYPGIPDALK---FAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQ-LQ--KKPELQ 155 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g-~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~-l~--~~~~~~ 155 (218)
...+|||+.++|+ ++| ++++|+||+.++.+...|++ +||..|||.+++++ .||+|+++.. +. ...+++
T Consensus 89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~ 167 (228)
T d2hcfa1 89 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYS 167 (228)
T ss_dssp GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCC
T ss_pred CceecCchHHHHhhhhccccccccccCCCcchhhhhhhhh-hcccccccccccccccccccchhHHHHHHhhhhcccCCC
Confidence 4579999999999 566 89999999999999999999 99999999998876 4577887533 22 223568
Q ss_pred CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 156 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+.+|+||||+.+|+++| ++ +||++|+|.||..+.+++..++|+ ++++++.||.++|
T Consensus 168 p~~~l~VGD~~~Di~aA-~~---aG~~~i~v~~g~~~~~~l~~~~ad--~vi~~~~el~~~l 223 (228)
T d2hcfa1 168 PSQIVIIGDTEHDIRCA-RE---LDARSIAVATGNFTMEELARHKPG--TLFKNFAETDEVL 223 (228)
T ss_dssp GGGEEEEESSHHHHHHH-HT---TTCEEEEECCSSSCHHHHHTTCCS--EEESCSCCHHHHH
T ss_pred hhHheeecCChHHHHHH-HH---cCCEEEEEcCCCCCHHHHhhCCCC--EEECCHHHHHHHH
Confidence 89999999999999999 99 999999999999999998877555 9999999999876
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=2.6e-23 Score=167.89 Aligned_cols=122 Identities=11% Similarity=0.104 Sum_probs=108.5
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
.....++||+.++|+ ++|++++|+||+++..++.++++ +|+..+|+.|++++ .||+|+++..+++++++++.
T Consensus 84 ~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~ 162 (218)
T d1te2a_ 84 EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPL 162 (218)
T ss_dssp HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGG
T ss_pred hccccccchHHHHHHHhhhcccccccccccccccccccccc-ccccccccccccccccccchhhHHHHHHHHHHcCCCch
Confidence 344578999999999 89999999999999999999999 99999999999986 57999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+|+||||+..|+.+| ++ +|+++|+|.++....+. ....++ ++++++.||.
T Consensus 163 ~~l~igD~~~di~aA-~~---~G~~~i~v~~~~~~~~~-~~~~a~--~~i~~l~el~ 212 (218)
T d1te2a_ 163 TCVALEDSVNGMIAS-KA---ARMRSIVVPAPEAQNDP-RFVLAN--VKLSSLTELT 212 (218)
T ss_dssp GEEEEESSHHHHHHH-HH---TTCEEEECCCTTTTTCG-GGGGSS--EECSCGGGCC
T ss_pred hcEEEeeCHHHHHHH-HH---cCCEEEEECCCCCccch-hhcCCC--EEECChhhCC
Confidence 999999999999999 99 99999999888765543 334455 9999999985
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.88 E-value=3.7e-23 Score=165.85 Aligned_cols=129 Identities=19% Similarity=0.192 Sum_probs=109.0
Q ss_pred HHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCCh
Q 027821 69 FGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPK 141 (218)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpk 141 (218)
+..+...+.... .....+|||+.++|+ ++|++++|+||+.+. +..+|++ +|+..||+.|+|++ .||+
T Consensus 66 ~~~~~~~~~~~~----~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~-~gl~~~f~~i~~s~~~~~~Kp~ 139 (204)
T d2go7a1 66 LNQVRAQSLAEK----NAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKD-LGVESYFTEILTSQSGFVRKPS 139 (204)
T ss_dssp HHHHHHHHHTTC----GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHH-HTCGGGEEEEECGGGCCCCTTS
T ss_pred HHHHHHHHHHhh----cccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhh-cccccccccccccccccccchh
Confidence 344444443333 566789999999999 889999999998875 5678999 99999999999876 5799
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|++++.++++.++++.+|+||||+.+|+++| ++ +||++|+|.+|.. .++ +.++++.|+.+.+
T Consensus 140 ~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A-~~---~G~~~i~v~~~~~--------~~~--~~~~~~~dl~~l~ 201 (204)
T d2go7a1 140 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFA-QN---SGIQSINFLESTY--------EGN--HRIQALADISRIF 201 (204)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHH-HH---HTCEEEESSCCSC--------TTE--EECSSTTHHHHHT
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHH-HH---cCCeEEEEcCCCC--------CcC--eecCCHHHHHHHh
Confidence 9999999999999999999999999999999 99 9999999998842 234 7889999988765
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.87 E-value=5e-22 Score=160.63 Aligned_cols=168 Identities=14% Similarity=0.100 Sum_probs=128.3
Q ss_pred CCChHHHHHhhhc-----cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHHhCCCcEEEEcCC
Q 027821 37 GLTVEGILENWSK-----IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTK 111 (218)
Q Consensus 37 ~~~~~~~~~~~~G-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~~~g~~laIvTnk 111 (218)
.++.++....+.| +...+....+.+.. .+..+++..++.+.. .....++||+.++|++.+.+.+|+||.
T Consensus 34 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~g~~~~L~~l~~~~~i~t~~ 107 (222)
T d2fdra1 34 PISVEEMGERFAGMTWKNILLQVESEASIPLS--ASLLDKSEKLLDMRL----ERDVKIIDGVKFALSRLTTPRCICSNS 107 (222)
T ss_dssp CCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCC--THHHHHHHHHHHHHH----HHHCCBCTTHHHHHHHCCSCEEEEESS
T ss_pred CCCHHHHHHHHhhhcccccccccccccccccc--ccchhHHHHHHHHHh----hhccchhhhHHHHhhhccccceeeeec
Confidence 4567777777777 22333333343211 122334444443332 445789999999999666788999999
Q ss_pred ChHHHHHHHHHhcCCCCCCceEE-cCC------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 112 QSRFADALLRELAGVTIPPDRIY-GLG------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 112 ~~~~~~~iL~~~~gl~~~Fd~I~-g~d------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
....++..|++ +|+..+|+.++ +.+ .||+|+++..++.++++++.+|+||||+..|+++| ++ +||++|
T Consensus 108 ~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA-~~---aG~~~i 182 (222)
T d2fdra1 108 SSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGA-RA---AGMRVI 182 (222)
T ss_dssp CHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHH-HH---TTCEEE
T ss_pred chhhhhhhhcc-cccccccceeecccccccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHH-HH---cCCEEE
Confidence 99999999999 99999999754 332 47889999999999999999999999999999999 99 999999
Q ss_pred EEecCCCCH----HHHHhccCCCCeEEcChhHHHhhc
Q 027821 185 LGDWGYNTQ----KEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 185 ~V~~G~~~~----~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+|.||+.+. +.+..++|+ +++++++||.+.|
T Consensus 183 ~v~~~~~~~~~~~~~l~~~~ad--~vi~~l~eL~~ll 217 (222)
T d2fdra1 183 GFTGASHTYPSHADRLTDAGAE--TVISRMQDLPAVI 217 (222)
T ss_dssp EECCSTTCCTTHHHHHHHHTCS--EEESCGGGHHHHH
T ss_pred EEccCCCCCcchHHHHHhCCCC--EEECCHHHHHHHH
Confidence 999998543 445556555 9999999998765
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.83 E-value=6e-21 Score=155.65 Aligned_cols=122 Identities=17% Similarity=0.187 Sum_probs=107.9
Q ss_pred cCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 87 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 87 ~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
...+|||+.++|+ ++|++++|+||.+.......+++ +|+.++||.|++++ .||+|++++.+..+.++++.+|+
T Consensus 98 ~~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l 176 (230)
T d1x42a1 98 YGELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV 176 (230)
T ss_dssp HCCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred hCcccccHHHHHHHhhccCceeeeeccccccchhhhcc-cccccccccccccccccccchhhHHHHHHHhhhcccccccc
Confidence 3578999999999 78999999999999999999999 99999999998875 68999999999999999999999
Q ss_pred EEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||+ .+|+++| ++ +|+++|++.++....... .. |++++.++.||.+.+
T Consensus 177 ~vgD~~~~Di~~A-~~---~G~~~v~v~~~~~~~~~~--~~--~d~~i~~l~el~~~l 226 (230)
T d1x42a1 177 YVGDNPVKDCGGS-KN---LGMTSILLDRKGEKREFW--DK--CDFIVSDLREVIKIV 226 (230)
T ss_dssp EEESCTTTTHHHH-HT---TTCEEEEECTTSCCGGGG--GG--SSEEESSTTHHHHHH
T ss_pred eeecCcHhHHHHH-HH---cCCEEEEECCCCCCcccc--cC--CCEEECCHHHHHHHH
Confidence 99998 4799999 99 999999999886654432 23 449999999998765
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.82 E-value=8.5e-21 Score=153.19 Aligned_cols=122 Identities=16% Similarity=0.166 Sum_probs=102.4
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
++.+.+.+..+.+.+.|.+.. .. .....++||+.++|+ +.|++++++||+.. ....++. +|+..+|+.++++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~-~~l~~~f~~i~~~ 138 (221)
T d1o08a_ 64 VSAEEFKELAKRKNDNYVKMI-QD-VSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLER-MNLTGYFDAIADP 138 (221)
T ss_dssp CCHHHHHHHHHHHHHHHHHHT-TT-CCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-TTCGGGCSEECCT
T ss_pred chhhhhhhHHHHHHhhccccc-cc-cccccccCCceeccccccccccceEEEeecch--hhHHHHh-hcccccccccccc
Confidence 456666666677777765432 11 234679999999999 89999999999765 6789999 9999999999887
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCC
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
+ .||+|++++.+++++++++.+|+||||+.+|+++| ++ +||++|+|.++.
T Consensus 139 ~~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A-~~---aG~~~i~v~~~~ 192 (221)
T d1o08a_ 139 AEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAI-KD---SGALPIGVGRPE 192 (221)
T ss_dssp TTSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHH-HH---HTCEEEEESCHH
T ss_pred ccccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHH-HH---cCCEEEEECChh
Confidence 6 57999999999999999999999999999999999 99 999999998753
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=2e-20 Score=153.36 Aligned_cols=125 Identities=11% Similarity=0.051 Sum_probs=106.9
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
....++||+.++|+ ++|++++|+||.+...+...+++ +|+..|||.+++++ .||+|++++.++.+.++++.+|
T Consensus 106 ~~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~ 184 (247)
T d2gfha1 106 QHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC 184 (247)
T ss_dssp HTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred ccCccCccHHHHHHHhhcccceEEeecccchhhhhhhhh-ccccccccccccccccccchhhhhhHHHHHHHhhcCHHhc
Confidence 44679999999999 78999999999999999999999 99999999998775 6799999999999999999999
Q ss_pred EEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+||||+. +|+.+| ++ +|++++.+..+.+..... ....|++++.++.||.+.|
T Consensus 185 l~iGD~~~~Di~~A-~~---~G~~~~~~~~~~~~~~~~--~~~~p~~~i~~l~eL~~ll 237 (247)
T d2gfha1 185 VMVGDTLETDIQGG-LN---AGLKATVWINKSGRVPLT--SSPMPHYMVSSVLELPALL 237 (247)
T ss_dssp EEEESCTTTHHHHH-HH---TTCSEEEEECTTCCCCSS--CCCCCSEEESSGGGHHHHH
T ss_pred ceeccChHhHHHHH-HH---cCCeEEEEECCCCCCccc--ccCCCCEEECCHHHHHHHH
Confidence 9999996 799999 99 999977665454443322 3445679999999998765
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=6.7e-20 Score=143.75 Aligned_cols=107 Identities=16% Similarity=0.114 Sum_probs=94.4
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCCh-HHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEE
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQS-RFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~-~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
....++|||+.++|+ ++|++++|+||+++ ..++..+++ +++..+|+.+.+.. +|+|+++..+++++++++++|+
T Consensus 42 ~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~-~~~~~~~~~~~~~~-kp~~~~~~~~~~~~~~~~~~~l 119 (164)
T d1u7pa_ 42 GQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLEL-FDLGKYFIQREIYP-GSKVTHFERLHHKTGVPFSQMV 119 (164)
T ss_dssp CCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHH-TTCGGGCSEEEESS-SCHHHHHHHHHHHHCCCGGGEE
T ss_pred ccccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhc-ccccccceeeeccc-CCChHHHHHHHHHhCCChHHEE
Confidence 455789999999999 89999999998776 567788899 99999999887654 7999999999999999999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
||||+..|+++| ++ +||.||+|.||+ +.+++++
T Consensus 120 ~igD~~~di~aA-~~---aG~~~i~v~~G~-~~~~~~~ 152 (164)
T d1u7pa_ 120 FFDDENRNIIDV-GR---LGVTCIHIRDGM-SLQTLTQ 152 (164)
T ss_dssp EEESCHHHHHHH-HT---TTCEEEECSSCC-CHHHHHH
T ss_pred EEcCCHHHHHHH-HH---cCCEEEEECCCC-ChHHHHH
Confidence 999999999999 99 999999999998 4455444
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.1e-19 Score=147.01 Aligned_cols=122 Identities=11% Similarity=0.114 Sum_probs=102.6
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc-CC----CCChHHHHHHHHhcCCCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG-LG----TGPKVEVLKQLQKKPELQG 156 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g-~d----~kpkPe~l~~l~~~~~~~~ 156 (218)
.....+|||+.++|+ ++|++++|+||.++......++. +|+..+|+...+ .+ .||+|++++.++++.++++
T Consensus 123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p 201 (253)
T d1zs9a1 123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCST 201 (253)
T ss_dssp SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCG
T ss_pred hcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHH-cCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCc
Confidence 445679999999999 88999999999999999999999 999989886532 23 5899999999999999999
Q ss_pred CcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHH
Q 027821 157 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 213 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l 213 (218)
.+|+||||+.+|+.+| ++ +||++|+|.++...........++ .++++++||
T Consensus 202 ~~~l~vgD~~~dv~aA-~~---aG~~ti~v~r~g~~~~~~~~~~~~--~~i~sl~EL 252 (253)
T d1zs9a1 202 NNILFLTDVTREASAA-EE---ADVHVAVVVRPGNAGLTDDEKTYY--SLITSFSEL 252 (253)
T ss_dssp GGEEEEESCHHHHHHH-HH---TTCEEEEECCTTCCCCCHHHHHHS--CEESSGGGC
T ss_pred CcEEEEeCCHHHHHHH-HH---cCCEEEEEeCCCCCCCchhhcCCC--cEECChHHh
Confidence 9999999999999999 99 999999997654333322333334 789999987
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.79 E-value=1.4e-19 Score=145.32 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=108.5
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
....++|++.++|+ +.|++++|+||......+..+++ .++..+||.+++++ .||.|+.+..++++.++++.+
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~-~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e 168 (220)
T d1zrna_ 90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA 168 (220)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred ccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhh-ccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCce
Confidence 34679999999999 89999999999999999999999 99999999998886 579999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
|+||||+..|+++| ++ +|+++|+|.++....+++ ...|+++++++.||++
T Consensus 169 ~l~VgD~~~Di~~A-~~---aG~~~v~v~r~~~~~~~~---~~~~d~~i~~l~el~~ 218 (220)
T d1zrna_ 169 ILFVASNAWDATGA-RY---FGFPTCWINRTGNVFEEM---GQTPDWEVTSLRAVVE 218 (220)
T ss_dssp EEEEESCHHHHHHH-HH---HTCCEEEECTTCCCCCSS---SCCCSEEESSHHHHHT
T ss_pred EEEEecChHhHHHH-HH---cCCEEEEEcCCCCCcccc---cCCCCEEECCHHHHHh
Confidence 99999999999999 99 999999998765555443 3345699999999975
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.78 E-value=5.3e-19 Score=143.95 Aligned_cols=126 Identities=17% Similarity=0.191 Sum_probs=106.6
Q ss_pred cCCCCCChHHHHH-hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEE
Q 027821 87 ANRFYPGIPDALK-FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 87 ~~~l~pGv~e~L~-~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
...++|++.++|+ -+++.++|+||++...+...+++ +|+..+||.|++++ .||+|+++..+++++++++.+|+|
T Consensus 91 ~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~-~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~ 169 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (245)
T ss_dssp SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred ccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhh-cccccccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence 4679999999999 68999999999999999999999 99999999998876 589999999999999999999999
Q ss_pred EcCChhhHHHhhccCccCCceEEEEecCCC------------CHHHH--------HhccCCCCeEEcChhHHHhhc
Q 027821 162 VEDRLATLKNVIKEPELDGWNLYLGDWGYN------------TQKER--------EEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~------------~~~~l--------~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|||+.+|+.+| ++ +||++|+|...-. .+... ......|+++++++.||+.-+
T Consensus 170 VgD~~~di~~A-~~---aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv 241 (245)
T d1qq5a_ 170 VSSNGFDVGGA-KN---FGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (245)
T ss_dssp EESCHHHHHHH-HH---HTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred EeCCHHHHHHH-HH---cCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHH
Confidence 99999999999 99 9999999964311 11000 111335779999999998754
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.78 E-value=7.2e-19 Score=139.50 Aligned_cols=112 Identities=14% Similarity=0.214 Sum_probs=92.9
Q ss_pred HHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCCh
Q 027821 69 FGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPK 141 (218)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpk 141 (218)
.+.|++.+.+. .....+|||+.++|+ ++|++++|+||++.... ..|++ +++..+||.|+|++ .||+
T Consensus 64 ~~~~~~~~~~~-----~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~-~~l~~~fd~i~~~~~~~~~KP~ 136 (187)
T d2fi1a1 64 LEKYKENEARE-----LEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEK-TSIAAYFTEVVTSSSGFKRKPN 136 (187)
T ss_dssp HHHHHHHHHHH-----TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHH-TTCGGGEEEEECGGGCCCCTTS
T ss_pred HHHHHHHHHHH-----hhcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhh-hccccccccccccccccccCCC
Confidence 34455554333 345789999999998 88999999999987665 57999 99999999999876 5788
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCH
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ 193 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~ 193 (218)
|+++..+++++++ .+|+||||+..|+++| ++ +|++||+|+++....
T Consensus 137 p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA-~~---aG~~~i~v~~~~~~~ 182 (187)
T d2fi1a1 137 PESMLYLREKYQI--SSGLVIGDRPIDIEAG-QA---AGLDTHLFTSIVNLR 182 (187)
T ss_dssp CHHHHHHHHHTTC--SSEEEEESSHHHHHHH-HH---TTCEEEECSCHHHHH
T ss_pred HHHHHHHHHHcCC--CCeEEEeCCHHHHHHH-HH---cCCEEEEECCCCChH
Confidence 9999999998864 5689999999999999 99 999999998765433
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=7.5e-19 Score=140.11 Aligned_cols=125 Identities=20% Similarity=0.206 Sum_probs=98.5
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEEcC----------
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL---------- 136 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~g~---------- 136 (218)
....+++||+.++|+ ++|++++|+||++. ......+.. .|+. ..+..+|.
T Consensus 23 ~~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~cp~~p~~~~~~~ 100 (182)
T d2gmwa1 23 IDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVD-LDGIYYCPHHPQGSVEEF 100 (182)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCC-CSEEEEECCBTTCSSGGG
T ss_pred HHHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhh-hccc-ccceeecccccccccccc
Confidence 345689999999999 89999999999974 233444554 5553 22222332
Q ss_pred -----CCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCce-EEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 137 -----GTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN-LYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 137 -----d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~-~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
.+||+|+++..+++++++++.+++||||+.+|+++| ++ ||+. +++|.+|+...+..+. .++ ++++++
T Consensus 101 ~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA-~~---Ag~~~~~lv~~g~~~~~~~~~-~ad--~v~~~l 173 (182)
T d2gmwa1 101 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAA-VA---ANVGTKVLVRTGKPITPEAEN-AAD--WVLNSL 173 (182)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHH-HH---TTCSEEEEESSSSCCCHHHHH-HCS--EEESCG
T ss_pred cccccccCCccccccchhhhcccccccccccCCCHHHHHHH-HH---hCCCcEEEECCCCCCCccccc-CCC--EEECCH
Confidence 168999999999999999999999999999999999 99 9996 5888999877665543 456 999999
Q ss_pred hHHHhhcC
Q 027821 211 SDFSRKLK 218 (218)
Q Consensus 211 ~~l~~~~~ 218 (218)
.|+++++|
T Consensus 174 ~dl~~~ik 181 (182)
T d2gmwa1 174 ADLPQAIK 181 (182)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHhc
Confidence 99998864
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.74 E-value=1.7e-18 Score=153.05 Aligned_cols=122 Identities=16% Similarity=0.026 Sum_probs=102.8
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce--EEcCC---------------CCChHHHHHHH
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR--IYGLG---------------TGPKVEVLKQL 148 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~--I~g~d---------------~kpkPe~l~~l 148 (218)
+|+||+.++|+ ++|++++|+||+++..++.++++ +||.+||+. +++.+ .||+|+++..+
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~-lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 46779999999 89999999999999999999999 999999975 33311 46889988666
Q ss_pred Hhc--------------CCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHH---HHHhccCCCCeEEcChh
Q 027821 149 QKK--------------PELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK---EREEAASIPRIQLLQLS 211 (218)
Q Consensus 149 ~~~--------------~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~---~l~~a~~~p~~~~~~~~ 211 (218)
+.. .+.++.+|+||||+.+|+.|| |+ ||+++|||.||+...+ ++.++++| ++++++.
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aa-k~---Ag~~~Igv~~G~~g~~~~~el~~~~AD--~ii~~~~ 367 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSA-QK---IGATFIGTLTGLKGKDAAGELEAHHAD--YVINHLG 367 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHH-HH---HTCEEEEESCBTTBGGGHHHHHHTTCS--EEESSGG
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHH-HH---CCCCEEEEecCCCCcccHHHHHhCCCC--EEECCHH
Confidence 543 345678899999999999999 99 9999999999987653 55666777 9999999
Q ss_pred HHHhhc
Q 027821 212 DFSRKL 217 (218)
Q Consensus 212 ~l~~~~ 217 (218)
||.+.|
T Consensus 368 el~~il 373 (380)
T d1qyia_ 368 ELRGVL 373 (380)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 998876
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=2.1e-18 Score=137.20 Aligned_cols=111 Identities=17% Similarity=0.064 Sum_probs=94.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChH----HHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSR----FADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQ 155 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~----~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~ 155 (218)
...++||+.++|. ++|++++|+||.... ........ .++.++||.|++++ +||+|++++++++..+++
T Consensus 97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~-~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~ 175 (225)
T d1zd3a1 97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-CELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS 175 (225)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-HHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhh-cChHhhccEEEeccccccchhHHHHHHHHhhhcccC
Confidence 4578999999999 899999999986543 34445556 78999999998875 789999999999999999
Q ss_pred CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCC
Q 027821 156 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASI 202 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~ 202 (218)
+.+|+||||+..|+++| ++ +|+++|+|.++....+++++....
T Consensus 176 p~e~l~VgD~~~Di~~A-~~---~G~~ti~v~~~~~~~~~l~~~~~~ 218 (225)
T d1zd3a1 176 PSEVVFLDDIGANLKPA-RD---LGMVTILVQDTDTALKELEKVTGI 218 (225)
T ss_dssp GGGEEEEESCHHHHHHH-HH---TTCEEEECSSHHHHHHHHHHHHTS
T ss_pred ccceeEEecCHHHHHHH-HH---cCCEEEEECCcchhHHHHHHccCc
Confidence 99999999999999999 99 999999999887777777766444
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.67 E-value=3.9e-18 Score=136.70 Aligned_cols=109 Identities=15% Similarity=0.065 Sum_probs=96.7
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCC----ChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCC
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTK----QSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPEL 154 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk----~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~ 154 (218)
....++||+.++|+ ++|++++|+||. ........+.+ +|+..|||.+++++ .||+|+++..+++..++
T Consensus 94 ~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~-~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v 172 (222)
T d1cr6a1 94 AARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMM-CELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKA 172 (222)
T ss_dssp HTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHH-HHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTS
T ss_pred hcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHh-cChHhhhceeeehhhccCCCCChHHHHHHHHHhCC
Confidence 44679999999999 899999999974 44466777888 89999999998885 68999999999999999
Q ss_pred CCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhc
Q 027821 155 QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA 199 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a 199 (218)
++.+|+||||+..|+++| ++ +||++|+|.+|....+++++.
T Consensus 173 ~p~~~l~IgD~~~Di~~A-~~---aG~~ti~V~~~~~~~~el~~~ 213 (222)
T d1cr6a1 173 KPNEVVFLDDFGSNLKPA-RD---MGMVTILVHNTASALRELEKV 213 (222)
T ss_dssp CTTSEEEEESSSTTTHHH-HH---HTCEEEECCSSSHHHHHHHHH
T ss_pred CcceEEEEECCHHHHHHH-HH---cCCEEEEECCcchHHHHHHHh
Confidence 999999999999999999 99 999999999988777777765
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.65 E-value=1.5e-17 Score=136.10 Aligned_cols=102 Identities=23% Similarity=0.181 Sum_probs=82.3
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEEcCC----------
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGLG---------- 137 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~g~d---------- 137 (218)
...++|||+.++|+ ++|++++||||++. +.+...|+. .|+ +++.++.+.
T Consensus 45 ~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~-~g~--~~~~~~~~~~~~~~~~~~~ 121 (209)
T d2o2xa1 45 AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGV--FVDMVLACAYHEAGVGPLA 121 (209)
T ss_dssp GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTC--CCSEEEEECCCTTCCSTTC
T ss_pred HHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhh-ccc--ccceEEEeccccccccccc
Confidence 34689999999999 88999999999762 234445555 554 345543221
Q ss_pred ------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 138 ------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 138 ------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
+||+|.++.++++++++++.+|+||||+.+|+++| ++ |||++++|.+|++..+
T Consensus 122 ~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA-~~---AGi~~i~v~~g~~~~~ 180 (209)
T d2o2xa1 122 IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAG-KR---AGLAQGWLVDGEAAVQ 180 (209)
T ss_dssp CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHH-HH---TTCSEEEEETCCCEEE
T ss_pred ccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHH-HH---CCCcEEEEeCCCCccc
Confidence 48999999999999999999999999999999999 99 9999999999986543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=4.7e-17 Score=127.96 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=80.0
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCC---------------hHHHHHHHHHhcCCCCCCceE-Ec----CC----
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRI-YG----LG---- 137 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~---------------~~~~~~iL~~~~gl~~~Fd~I-~g----~d---- 137 (218)
.....++||+.++|+ ++|++++|+||++ .......|.. .|+. ++.| ++ .+
T Consensus 26 ~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~i~~~~~~~~~~~~~ 102 (161)
T d2fpwa1 26 FDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQ--FDEVLICPHLPADECDC 102 (161)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHH-TTCC--EEEEEEECCCGGGCCSS
T ss_pred HHHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccc-cccc--cceeeeccccccccccc
Confidence 345789999999999 8999999999986 2345566777 7775 3333 22 22
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
+||+|+++.+++.+.++++.+++||||+..|+++| ++ |||++|.+..+..+-.
T Consensus 103 ~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA-~~---aG~~~i~i~~~~~~~~ 155 (161)
T d2fpwa1 103 RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLA-EN---MGINGLRYDRETLNWP 155 (161)
T ss_dssp STTSSGGGGGGC----CCGGGCEEEESSHHHHHHH-HH---HTSEEEECBTTTBCHH
T ss_pred cccccHHHHHHHHhcCCChhcEEEECCCHHHHHHH-HH---cCCeEEEECCCCCCHH
Confidence 58999999999999999999999999999999999 99 9999999977655443
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.57 E-value=7.5e-15 Score=121.50 Aligned_cols=76 Identities=22% Similarity=0.270 Sum_probs=70.5
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 139 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 139 kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||+|.++..+++.+++++++|+||||+. +||.+| ++ +||++|+|.||..+.+++..+...|+|+++++.||.+.|
T Consensus 185 KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga-~~---aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLG-KN---AGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHH-HH---HTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred CCcHHHHHHHHhhhccCchhcceecCChhHHHHHH-HH---CCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 6888999999999999999999999995 699999 99 999999999999999988888778889999999999987
Q ss_pred C
Q 027821 218 K 218 (218)
Q Consensus 218 ~ 218 (218)
+
T Consensus 261 ~ 261 (261)
T d1vjra_ 261 Q 261 (261)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.56 E-value=6.9e-15 Score=121.56 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=66.5
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 139 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 139 kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
||+|++++.+++++++++++|+||||++ +||++| ++ |||++|+|.||+.++++++.....|+++++++.||.
T Consensus 176 KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a-~~---aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAG-FQ---AGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHH-HH---TTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred cchhhhHhhhhhhhcCCchheEEecCChHHHHHHH-HH---CCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 7889999999999999999999999996 599999 99 999999999999999988877777889999999975
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.55 E-value=4.3e-15 Score=118.24 Aligned_cols=119 Identities=10% Similarity=0.083 Sum_probs=94.6
Q ss_pred cccCCCCCChHHHHHhCCCcEEEEcCCChHHHHHH-----------HHHhcCCCCCCceEEcCC---CCChHHHHHHHHh
Q 027821 85 IGANRFYPGIPDALKFASSRIYIVTTKQSRFADAL-----------LRELAGVTIPPDRIYGLG---TGPKVEVLKQLQK 150 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~i-----------L~~~~gl~~~Fd~I~g~d---~kpkPe~l~~l~~ 150 (218)
.....+++++.+++ ..+.++++.|++.......+ ++. +||.+||+.|++++ .||+|+++..++.
T Consensus 93 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~ 170 (225)
T d2g80a1 93 QIKAPVYADAIDFI-KRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDS-LDLNSYIDGYFDINTSGKKTETQSYANILR 170 (225)
T ss_dssp SCCBCCCHHHHHHH-HHCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCC-BCCGGGCCEEECHHHHCCTTCHHHHHHHHH
T ss_pred cccccchhhHHHHH-hhHHhhhhhhhccchhhhhhhhhhhhhHHHHHHh-cCCccccceeeeccccCCCCChhHhHHHHH
Confidence 34456888888888 56677899999887665544 355 68999999999886 6899999999999
Q ss_pred cCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHH
Q 027821 151 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 213 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l 213 (218)
+.++++.+|+||||+..|+.+| ++ +||++|+|......+ . ....|+.++.+++||
T Consensus 171 ~lg~~p~e~l~VgD~~~Dv~~A-~~---aG~~ti~v~r~g~~~--~--~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 171 DIGAKASEVLFLSDNPLELDAA-AG---VGIATGLASRPGNAP--V--PDGQKYQVYKNFETL 225 (225)
T ss_dssp HHTCCGGGEEEEESCHHHHHHH-HT---TTCEEEEECCTTSCC--C--CSSCCSCEESCSTTC
T ss_pred hcccCchhceeecCCHHHHHHH-HH---cCCEEEEEeCCCCCC--C--cccCCCCccCChhhC
Confidence 9999999999999999999999 99 999999997532221 1 223455788888875
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.54 E-value=1.3e-16 Score=123.57 Aligned_cols=98 Identities=11% Similarity=0.162 Sum_probs=86.8
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..+++|+.+++. .+|++++|+||.........+.++.|+..+|+.+++++ .||+|++++.++++.++++.+|+
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l 162 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 162 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEE
Confidence 468899999988 89999999999988877777777138889999998875 67999999999999999999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
|||||.+|+++| ++ +||++|.|+-.
T Consensus 163 ~vgDs~~di~~A-~~---aG~~ti~v~~~ 187 (197)
T d2b0ca1 163 FFDDNADNIEGA-NQ---LGITSILVKDK 187 (197)
T ss_dssp EEESCHHHHHHH-HT---TTCEEEECCST
T ss_pred EEeCCHHHHHHH-HH---cCCEEEEECCC
Confidence 999999999999 99 99999999643
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.44 E-value=1.4e-14 Score=116.64 Aligned_cols=121 Identities=8% Similarity=0.090 Sum_probs=92.7
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce---EEcCC--------------CCChHHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR---IYGLG--------------TGPKVEVLK 146 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~---I~g~d--------------~kpkPe~l~ 146 (218)
..+++||+.++|+ ++|++++|+||+.+..++.+|++ +|+..+|-. .+..+ .++||+.+.
T Consensus 73 ~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~-l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 151 (226)
T d2feaa1 73 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKP 151 (226)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTT-TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHH
T ss_pred ccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHH-cCCccceeeeeEEEeCCcceeccccccccccccCCHHHHH
Confidence 4579999999999 88999999999999999999999 998776632 11111 346788888
Q ss_pred HHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 147 QLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+++..+.++.+++|||||.+|+.|| ++ ||+ .+++.++ .+..... ..|...++++.|++.++
T Consensus 152 ~~~~~~~~~~~~~i~iGDs~~Dl~~a-~~---A~~-~~a~~~~---~~~~~~~-~~~~~~~~d~~~i~~~l 213 (226)
T d2feaa1 152 SVIHELSEPNQYIIMIGDSVTDVEAA-KL---SDL-CFARDYL---LNECREQ-NLNHLPYQDFYEIRKEI 213 (226)
T ss_dssp HHHHHHCCTTCEEEEEECCGGGHHHH-HT---CSE-EEECHHH---HHHHHHT-TCCEECCSSHHHHHHHH
T ss_pred HHHHHhcCCCceEEEEeCchhhHHHH-HH---CCE-EEEecch---HHHHHHc-CCCeeecCCHHHHHHHH
Confidence 88888888889999999999999999 99 997 3344332 2333333 23456688988887765
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.37 E-value=1.4e-13 Score=113.62 Aligned_cols=72 Identities=13% Similarity=0.189 Sum_probs=66.4
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChh-hHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLA-TLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 213 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l 213 (218)
.||.|++++.++++.++++++|+||||+.. ||++| ++ +||++|+|+||+.+++++......|+++++++.||
T Consensus 179 gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA-~~---aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 179 GKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAG-IK---NDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp STTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHH-HH---TTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred ccCCcccceehhhhccccccceEEEcCChHHHHHHH-HH---CCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 489999999999999999999999999966 99999 99 99999999999998888877777788999999986
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.30 E-value=4.7e-13 Score=110.20 Aligned_cols=72 Identities=13% Similarity=0.223 Sum_probs=66.5
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 213 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l 213 (218)
.||+|+++.++++..++++++|+||||+. +||++| ++ |||++|+|.||+...+.+......|+++++++.|+
T Consensus 179 ~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a-~~---aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 179 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSG-IQ---NGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHH-HH---HTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred cccchhHHHHHHHHhCCCccceEEecCChHHHHHHH-HH---CCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence 58999999999999999999999999996 599999 99 99999999999988888888887788999999986
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.24 E-value=1.6e-12 Score=98.41 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=66.3
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHH---HHHHHHHhcC------CCCCCceEEcCC---CCChHHHHHHHHhc
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRF---ADALLRELAG------VTIPPDRIYGLG---TGPKVEVLKQLQKK 151 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~---~~~iL~~~~g------l~~~Fd~I~g~d---~kpkPe~l~~l~~~ 151 (218)
...++||+.++|+ ++|++++++||++... +..-|+. ++ ...+++..+... ..|++.....++.+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~ 112 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM-TRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWK 112 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH-HHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHH-HhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHH
Confidence 4679999999999 8999999999987432 2222322 21 234556555443 23554444333333
Q ss_pred CCCCCCc-EEEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 152 PELQGMT-LHFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 152 ~~~~~~e-~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
...+..+ +++|||+..|+++| ++ +|++|++|+||
T Consensus 113 ~~~~~~~i~~~igD~~~dv~a~-~~---~Gi~~~~V~~G 147 (149)
T d1ltqa1 113 HIAPHFDVKLAIDDRTQVVEMW-RR---IGVECWQVASG 147 (149)
T ss_dssp HTTTTCEEEEEEECCHHHHHHH-HH---TTCCEEECSCC
T ss_pred hccCCCceEEEEcCCHHHHHHH-HH---CCCcEEEeCCC
Confidence 2212223 46889999999999 99 99999999998
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=1.5e-11 Score=99.44 Aligned_cols=116 Identities=13% Similarity=0.221 Sum_probs=82.5
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC------ceE----E-cCC-C------CChHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP------DRI----Y-GLG-T------GPKVEVL 145 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F------d~I----~-g~d-~------kpkPe~l 145 (218)
...++||+.++++ ++|++++|||++....++.++++ +|++.+. +.. + +.. . ..|.+.+
T Consensus 80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~-lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v 158 (217)
T d1nnla_ 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 158 (217)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHH-hCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHH
Confidence 3568999999999 89999999999999999999999 9997431 111 0 111 1 1244566
Q ss_pred HHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 146 KQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+.+.... +..+|++||||.+|+.++ +. ||+. ++ +|...........++ +.+.++.||+
T Consensus 159 ~~~~~~~--~~~~~~~vGDs~~Di~~~-~~---ag~~-va--~~~~~~~~~~~~~ad--~~i~~f~ell 216 (217)
T d1nnla_ 159 KLLKEKF--HFKKIIMIGDGATDMEAC-PP---ADAF-IG--FGGNVIRQQVKDNAK--WYITDFVELL 216 (217)
T ss_dssp HHHHHHH--CCSCEEEEESSHHHHTTT-TT---SSEE-EE--ECSSCCCHHHHHHCS--EEESCGGGGC
T ss_pred HHHHhcc--CccccEEEEeCHhhHHHH-Hh---CCce-EE--ECCCHHHHHHHHhCC--CEeCCHHHhc
Confidence 6665544 456789999999999999 99 9964 33 444333222223456 8899998875
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.00 E-value=5.4e-10 Score=86.87 Aligned_cols=119 Identities=13% Similarity=0.076 Sum_probs=95.4
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--------------CCChHHHHHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--------------TGPKVEVLKQLQ 149 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--------------~kpkPe~l~~l~ 149 (218)
...+++|+.+.++ .+|..++++|++....+....++ .+...+|......+ .++++..+..+.
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhc-cchhhhhhhhhccccccccccccccccccccccchhhhHH
Confidence 4578999999999 89999999999999999999999 99987776654332 235677888888
Q ss_pred hcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc--ChhHHHhhcC
Q 027821 150 KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKLK 218 (218)
Q Consensus 150 ~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~--~~~~l~~~~~ 218 (218)
...++.+.++++|||+.+|+.++ +. ||+. |++ + ..+.+++ .++ ++++ ++.+++..||
T Consensus 152 ~~~~~~~~~~i~iGDs~nDi~m~-~~---ag~~-va~--n--a~~~lk~-~Ad--~vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGANDISMF-KK---AGLK-IAF--C--AKPILKE-KAD--ICIEKRDLREILKYIK 210 (210)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHH-HH---CSEE-EEE--S--CCHHHHT-TCS--EEECSSCGGGGGGGCC
T ss_pred HHhcccccceEEecCCcChHHHH-HH---CCCC-EEE--C--CCHHHHH-hCC--EEEcCCCHHHHHHHhC
Confidence 88888899999999999999999 99 9974 444 2 2345544 467 9998 4578988876
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.79 E-value=4.7e-09 Score=84.07 Aligned_cols=88 Identities=22% Similarity=0.274 Sum_probs=70.5
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCCh------------HHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHh
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQS------------RFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQK 150 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~------------~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~ 150 (218)
++|+|.++|+ ++|+.++|+||.+. ...+.++++ ++.. +++.++.. +||+|.|+..+..
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~-l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHH-cCCC--ccEEEecCccccCCCccHHHHHHHH
Confidence 5799999999 88999999999753 335667777 7754 45555542 8999999999988
Q ss_pred cCC----CCCCcEEEEcCC-----------------hhhHHHhhccCccCCceEE
Q 027821 151 KPE----LQGMTLHFVEDR-----------------LATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 151 ~~~----~~~~e~l~IGDs-----------------~~Di~aA~k~~~~AGv~~i 184 (218)
++. ++..+++||||. ..|++.| +| +|+++.
T Consensus 128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA-~N---~gikF~ 178 (195)
T d1yj5a1 128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFA-LN---VGLPFA 178 (195)
T ss_dssp TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHH-HH---HTCCEE
T ss_pred HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHH-HH---CCCccc
Confidence 764 667788999995 4999999 99 999875
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.02 E-value=6.2e-06 Score=62.98 Aligned_cols=119 Identities=10% Similarity=0.046 Sum_probs=84.5
Q ss_pred cCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc--CC------CCChHHHHHHHHhcCCCCC
Q 027821 87 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG--LG------TGPKVEVLKQLQKKPELQG 156 (218)
Q Consensus 87 ~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g--~d------~kpkPe~l~~l~~~~~~~~ 156 (218)
....+++....+. +.+.+.+++|............. +++..++..... .. ..+++..........+.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 145 (206)
T d1rkua_ 67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 145 (206)
T ss_dssp TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred hccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHH-hCCchhhcceeeeecccccccccccchhhHHHHHHHhcccc
Confidence 3568899988888 88999999999999999999998 888765543321 11 1244445555555555677
Q ss_pred CcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeE-EcChhHHHhhc
Q 027821 157 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQ-LLQLSDFSRKL 217 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~-~~~~~~l~~~~ 217 (218)
.++++|||+.+|+.+. +. ||+.+ | .+ .+ +++....++ ++ ..+.+|+.+.+
T Consensus 146 ~eviaiGDg~NDi~Ml-~~---Ag~gI-A--mn-a~-~~v~~~~~~--~~~~~~~~d~~~~~ 196 (206)
T d1rkua_ 146 YRVIAAGDSYNDTTML-SE---AHAGI-L--FH-AP-ENVIREFPQ--FPAVHTYEDLKREF 196 (206)
T ss_dssp CEEEEEECSSTTHHHH-HH---SSEEE-E--ES-CC-HHHHHHCTT--SCEECSHHHHHHHH
T ss_pred cceEEecCCccCHHHH-Hh---CCccE-E--EC-CC-HHHHHhCCC--ceeecCHHHHHHHH
Confidence 8999999999999999 99 99743 2 34 23 344433344 64 67888887643
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=2.3e-06 Score=68.67 Aligned_cols=90 Identities=11% Similarity=-0.002 Sum_probs=65.0
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCCh---HHHHHHH-HHhcCCC--CCCceEEcCCC--C-ChHHHHHHHHhcC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQS---RFADALL-RELAGVT--IPPDRIYGLGT--G-PKVEVLKQLQKKP 152 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~---~~~~~iL-~~~~gl~--~~Fd~I~g~d~--k-pkPe~l~~l~~~~ 152 (218)
.....+.||+.++|+ ++|++++.+||+.. +.+...| +. +|+- ...+.++..+. | .+-..+ +++
T Consensus 82 ~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~-lG~p~~~~~~vll~~~~~~K~~rr~~I----k~y 156 (209)
T d2b82a1 82 DEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADN-FHIPATNMNPVIFAGDKPGQNTKSQWL----QDK 156 (209)
T ss_dssp GGGCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHH-TTCCTTTBCCCEECCCCTTCCCSHHHH----HHT
T ss_pred ccccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHH-cCCCcccccceEeeCCCCCchHHHHHH----HHc
Confidence 445678899999999 89999999999764 3444555 55 7873 44455666542 2 333333 345
Q ss_pred CCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 153 ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
++ .+++||..+|+.+| ++ ||+++|-|.
T Consensus 157 ~I----~l~~GD~l~Df~aA-~e---agi~~iRi~ 183 (209)
T d2b82a1 157 NI----RIFYGDSDNDITAA-RD---VGARGIRIL 183 (209)
T ss_dssp TE----EEEEESSHHHHHHH-HH---TTCEEEECC
T ss_pred Ce----EEEecCCHHHHhHH-HH---cCCCceEee
Confidence 43 37999999999999 99 999999984
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.89 E-value=4.8e-05 Score=56.61 Aligned_cols=108 Identities=19% Similarity=0.178 Sum_probs=72.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCC-CChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~-kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+-|++.++++ +.|+++.|+|+-..+.+..+-++ +||+ .+++... ..|...++.+... ..+.|||
T Consensus 20 D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~-lgI~----~v~~~~~p~~k~~~v~~~q~~-----~~v~~vG 89 (135)
T d2b8ea1 20 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKKLQAK-----EVVAFVG 89 (135)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCHHHHHHHHHHHTTT-----SCEEEEE
T ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhh-hhhh----hhccccchhHHHHHHHHHHcC-----CEEEEEe
Confidence 468899999999 89999999999999999999999 9985 3444432 2445555555432 3568999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHhh
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRK 216 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~~ 216 (218)
|..+|..+- +. |++- +..|.++. .....+| +++ +++..+++-
T Consensus 90 Dg~nD~~aL-~~---Advg---ia~~~~~~--~~~~aAD--ivl~~~~l~~i~~a 133 (135)
T d2b8ea1 90 DGINDAPAL-AQ---ADLG---IAVGSGSD--VAVESGD--IVLIRDDLRDVVAA 133 (135)
T ss_dssp CSSSSHHHH-HH---SSEE---EEECCC----------S--EEESSCCTHHHHHH
T ss_pred CCCCcHHHH-Hh---CCee---eecCccCH--HHHHhCC--EEEECCCHHHHHHH
Confidence 999999998 88 8763 33443332 2233456 776 446666543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.75 E-value=7.8e-05 Score=62.31 Aligned_cols=85 Identities=12% Similarity=0.144 Sum_probs=60.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC------------CC------ChHHHHH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG------------TG------PKVEVLK 146 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d------------~k------pkPe~l~ 146 (218)
..+-||+.++++ ++|++++|+|+.-..+++.++++ +|+...=-.|++.. .+ .|-+.+.
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~-lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~ 212 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 212 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHH-TTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-cCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence 578999999999 89999999999999999999999 98763211355432 01 2223331
Q ss_pred H---HHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 147 Q---LQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 147 ~---l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
. ...... ...++++||||.+|+.+| +.
T Consensus 213 ~~~~~~~~~~-~~~~vI~iGDs~~Dl~Ma-~g 242 (291)
T d2bdua1 213 KNTDYFSQLK-DNSNIILLGDSQGDLRMA-DG 242 (291)
T ss_dssp TTHHHHHHTT-TCCEEEEEESSSGGGGTT-TT
T ss_pred hhHHHHhccC-CcCcEEEEeCCHhHHHHH-hC
Confidence 1 112222 456789999999999999 64
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.61 E-value=4.8e-05 Score=67.30 Aligned_cols=94 Identities=17% Similarity=0.241 Sum_probs=69.1
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhc--------CCCCCCceEEcCCCCCh------------------
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADALLRELA--------GVTIPPDRIYGLGTGPK------------------ 141 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~--------gl~~~Fd~I~g~d~kpk------------------ 141 (218)
=|.+..+|+ ++|.++.++||++-.+++.+++.++ .+.++||+|++...||.
T Consensus 187 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l 266 (458)
T d2bdea1 187 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTM 266 (458)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTCCE
T ss_pred ChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCCcc
Confidence 356777887 8899999999999999999999877 66789999876531111
Q ss_pred --------HHH-----HHHHHhcCCCCCCcEEEEcCChh-hHHHhhccCccCCceEEEEe
Q 027821 142 --------VEV-----LKQLQKKPELQGMTLHFVEDRLA-TLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 142 --------Pe~-----l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~k~~~~AGv~~i~V~ 187 (218)
|.+ +..+.+..+....+++||||+.. ||..+-+. .||+|++|-
T Consensus 267 ~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~---~gWrT~~Ii 323 (458)
T d2bdea1 267 TNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKD---CNWRTALVV 323 (458)
T ss_dssp EECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHH---HCSEEEEEC
T ss_pred ccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhh---cCCceEEeh
Confidence 111 13444444545568999999975 65655356 899999995
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.51 E-value=0.00025 Score=54.66 Aligned_cols=97 Identities=10% Similarity=-0.014 Sum_probs=66.1
Q ss_pred hCCCcEEEEc-CCChHHHHHHHHHhcCCCCCCceEEcC---C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHH
Q 027821 100 FASSRIYIVT-TKQSRFADALLRELAGVTIPPDRIYGL---G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKN 171 (218)
Q Consensus 100 ~~g~~laIvT-nk~~~~~~~iL~~~~gl~~~Fd~I~g~---d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~a 171 (218)
.+...+.+.. ....+.++.++++ ++.... ...+. + ..+|+..++.++...++++.++++|||+.+|+.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~m 183 (230)
T d1wr8a_ 107 DRRAGLVIMRETINVETVREIINE-LNLNLV--AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDA 183 (230)
T ss_dssp GCSSCEEECTTTSCHHHHHHHHHH-TTCSCE--EEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHH
T ss_pred cceeeEEEecccccHHHHHHHHHH-hccceE--EeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHH
Confidence 3444455544 3455677888888 765422 12222 1 3499999999999999899999999999999999
Q ss_pred hhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 172 VIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 172 A~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
. +. ||+ .|+ .|..++ .++. .++ +++.+.
T Consensus 184 l-~~---ag~-~va--v~na~~-~~k~-~A~--~v~~~~ 211 (230)
T d1wr8a_ 184 F-KV---VGY-KVA--VAQAPK-ILKE-NAD--YVTKKE 211 (230)
T ss_dssp H-HH---SSE-EEE--CTTSCH-HHHT-TCS--EECSSC
T ss_pred H-HH---CCe-EEE--ECCCCH-HHHH-hCC--EEECCC
Confidence 9 98 885 343 455554 3444 356 887663
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.37 E-value=0.00016 Score=55.95 Aligned_cols=95 Identities=14% Similarity=0.060 Sum_probs=71.9
Q ss_pred HHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCc
Q 027821 98 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 177 (218)
Q Consensus 98 L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~ 177 (218)
|+..|+.++++|......+....++ +++...+. + ..+|...++.++.+.+++..+++||||..+|+.+- +.
T Consensus 44 l~~~gi~~~iis~~~~~~v~~~~~~-l~~~~~~~---~--~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l-~~-- 114 (177)
T d1k1ea_ 44 LMDADIQVAVLSGRDSPILRRRIAD-LGIKLFFL---G--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAF-AA-- 114 (177)
T ss_dssp HHHTTCEEEEEESCCCHHHHHHHHH-HTCCEEEE---S--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-HH--
T ss_pred HhhhcEEEEEecCCchhHHHHHHhh-hccccccc---c--cccHHHHHHHHHHHhcCCcceeEEecCCccHHHHH-hh--
Confidence 3389999999999999999999998 88753221 1 24788888899998899999999999999999999 98
Q ss_pred cCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 178 LDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 178 ~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
+|+ .+++. -.+++. + ..++ ++..+
T Consensus 115 -~g~-siap~--nA~~~v-k-~~A~--~Vt~~ 138 (177)
T d1k1ea_ 115 -CGT-SFAVA--DAPIYV-K-NAVD--HVLST 138 (177)
T ss_dssp -SSE-EEECT--TSCHHH-H-TTSS--EECSS
T ss_pred -CCe-EEEcC--CccHHH-H-HhCC--EEeCC
Confidence 886 33342 233333 3 2446 77765
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.09 E-value=0.0005 Score=53.55 Aligned_cols=60 Identities=10% Similarity=-0.085 Sum_probs=47.0
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
.|...++.+++++++++.++++|||+.+|+.+. +. +|+ .|+| |..++ ++++ .++ +++.+.
T Consensus 151 ~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~-~~---a~~-~vav--~na~~-~~k~-~ad--~v~~~~ 210 (225)
T d1l6ra_ 151 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMF-QL---PVR-KACP--ANATD-NIKA-VSD--FVSDYS 210 (225)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHH-TS---SSE-EEEC--TTSCH-HHHH-HCS--EECSCC
T ss_pred chHHHHHHHhhhhccchhheeeecCCcchHHHH-HH---CCe-EEEE--CCCcH-HHHH-hCC--EEECCC
Confidence 778899999999999999999999999999999 98 885 4445 43444 4444 346 887665
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.09 E-value=0.0045 Score=47.03 Aligned_cols=106 Identities=16% Similarity=0.128 Sum_probs=70.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce---------------------------EEcCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR---------------------------IYGLG 137 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~---------------------------I~g~d 137 (218)
.+|-|+++++++ +.|+++.++|+-+...+..+-++ +|+...-+. +++..
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~-~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHH-cCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhcc
Confidence 468899999999 89999999999999999999999 999532211 22221
Q ss_pred C-CChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 138 T-GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 138 ~-kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
. ..|-.++..+... + ..+.|+||..+|..|= +. |.+ |+.-|.++. .....+| +++.+
T Consensus 98 ~p~~K~~lv~~l~~~-g---~~Va~vGDG~nD~~AL-~~---Adv---GIa~~~gt~--~a~~aAd--ivl~~ 155 (168)
T d1wpga2 98 EPSHKSKIVEYLQSY-D---EITAMTGDGVNDAPAL-KK---AEI---GIAMGSGTA--VAKTASE--MVLAD 155 (168)
T ss_dssp CHHHHHHHHHHHHHT-T---CCEEEEECSGGGHHHH-HH---SSE---EEEETTSCH--HHHHTCS--EEETT
T ss_pred chhHHHHHHHHHHhc-c---cceeEEecCCCCHHHH-Hh---CCE---EEEeccccH--HHHHhCC--EEEcc
Confidence 1 1223334444443 3 2357999999999998 88 874 444454443 2223446 66544
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=96.39 E-value=0.0094 Score=47.14 Aligned_cols=110 Identities=16% Similarity=0.140 Sum_probs=66.3
Q ss_pred CCCChHHHHH-hCCCcEEEEcCCCh-HHHHHHHHHhcCCCCCCceEEcCC------C--CChHHHHHHHHhcCCCCCCcE
Q 027821 90 FYPGIPDALK-FASSRIYIVTTKQS-RFADALLRELAGVTIPPDRIYGLG------T--GPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 90 l~pGv~e~L~-~~g~~laIvTnk~~-~~~~~iL~~~~gl~~~Fd~I~g~d------~--kpkPe~l~~l~~~~~~~~~e~ 159 (218)
..+...+... ..-.++.+..++.. +.+...++..++ ..+..+.+.. . -.|...++.+++.++++..++
T Consensus 132 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~i~~~~v 209 (267)
T d1nf2a_ 132 VEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFK--DVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEI 209 (267)
T ss_dssp ECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHT--TTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGE
T ss_pred ecCcHHHHhhhccceEEEEeccHHHHHHHHHHHHHhhC--CcEEEEEeecceeeecCCCCchhHHHHHHHHhhccCcccE
Confidence 3455666665 34444444433221 223333333022 3345554432 2 278889999999999899999
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
++|||+.+|+.+- +. +|. .|++ |.++++ +++ .++ +++.+..+
T Consensus 210 va~GD~~ND~~ml-~~---~~~-sva~--~na~~~-~k~-~A~--~i~~~~~~ 251 (267)
T d1nf2a_ 210 VVFGDNENDLFMF-EE---AGL-RVAM--ENAIEK-VKE-ASD--IVTLTNND 251 (267)
T ss_dssp EEEECSHHHHHHH-TT---CSE-EEEC--TTSCHH-HHH-HCS--EECCCTTT
T ss_pred EEEcCCcchHHHH-Hh---CCc-EEEe--CCCCHH-HHH-hCC--EEcCCCCc
Confidence 9999999999999 88 885 3455 444444 433 336 77766553
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=96.19 E-value=0.021 Score=45.00 Aligned_cols=90 Identities=12% Similarity=-0.036 Sum_probs=59.9
Q ss_pred CCChHHHHHHHHHhcCCCCCCceEEcCC------C--CChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCc
Q 027821 110 TKQSRFADALLRELAGVTIPPDRIYGLG------T--GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 110 nk~~~~~~~iL~~~~gl~~~Fd~I~g~d------~--kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv 181 (218)
....+.+...... .....-...+.+.. . -.|-..++.+++.++++..++++|||+.||+.+- +. +|.
T Consensus 176 ~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml-~~---a~~ 250 (285)
T d1nrwa_ 176 SFFKEKLEAGWKR-YEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSML-EA---AGK 250 (285)
T ss_dssp CSCHHHHHHHHHH-HTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHH-HH---SSE
T ss_pred cchHHHHHHHHHH-hhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHH-Hh---CCe
Confidence 4455556666665 44333333333332 1 2788899999999999999999999999999999 98 884
Q ss_pred eEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 182 NLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 182 ~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
.|+|..+ +++..+ .++ +++.+.+
T Consensus 251 -svam~na--~~~~k~--~A~--~v~~~~~ 273 (285)
T d1nrwa_ 251 -GVAMGNA--REDIKS--IAD--AVTLTND 273 (285)
T ss_dssp -EEECTTC--CHHHHH--HCS--EECCCGG
T ss_pred -EEEeCCC--CHHHHH--hCC--EEcCCCC
Confidence 4566543 444333 336 7777644
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=96.16 E-value=0.0093 Score=45.20 Aligned_cols=40 Identities=15% Similarity=0.006 Sum_probs=34.7
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP 129 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~ 129 (218)
.+-+...++|+ ++|++++++|+++...+..+++. +++..+
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~-~~~~~~ 63 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKT-LGLQGL 63 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHH-TTCTTS
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHH-hccCCc
Confidence 45677888888 89999999999999999999999 998643
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.02 E-value=0.0053 Score=48.44 Aligned_cols=60 Identities=5% Similarity=-0.075 Sum_probs=46.6
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
.|...++.+++.++++..++++|||+.+|+.+- +. +|. +++|. -++++ +++ .++ ++..+.
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml-~~---a~~-svav~--na~~~-lk~-~A~--~vt~~~ 245 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISML-RH---AAI-GVAMG--QAKED-VKA-AAD--YVTAPI 245 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-HH---SSE-EEECT--TSCHH-HHH-HSS--EECCCG
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHH-Hh---CCe-EEEeC--CCCHH-HHH-hCC--EEeCCC
Confidence 688889999999999999999999999999999 88 887 56663 33444 433 335 777763
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.01 Score=45.10 Aligned_cols=108 Identities=16% Similarity=0.121 Sum_probs=69.3
Q ss_pred cccCCCCCChHHHHH---h-CCCcEEEEcCCChH------HHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCC
Q 027821 85 IGANRFYPGIPDALK---F-ASSRIYIVTTKQSR------FADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPEL 154 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~-~g~~laIvTnk~~~------~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~ 154 (218)
....+|+||+.++|+ + .+..+.|+|+.... ....=|++.+|-..+...+++.+ | ..+
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~-K------------~~~ 136 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD-K------------TVV 136 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC-S------------TTS
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc-c------------cee
Confidence 456789999999999 4 45578899986532 22234555134333334455543 2 112
Q ss_pred CCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 155 QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
.+. ++|+|++..+.++ .+ +|+++|..+..|+... ..+.+.+-+.+..|+.+
T Consensus 137 ~~d--~lIDD~p~n~~~~-~~---~g~~~il~~~~~N~~~----~~~~~~~Rv~~W~e~~~ 187 (195)
T d1q92a_ 137 SAD--LLIDDRPDITGAE-PT---PSWEHVLFTACHNQHL----QLQPPRRRLHSWADDWK 187 (195)
T ss_dssp CCS--EEEESCSCCCCSC-SS---CSSEEEEECCTTTTTC----CCCTTCEEECCTTSCHH
T ss_pred cCe--EEecCcHHHHHHH-hc---CCCeEEEECCCcccCC----CCCCCceeeCCHHHHHH
Confidence 233 8999999999999 88 9999999987775532 11223356777777544
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=95.50 E-value=0.01 Score=46.65 Aligned_cols=61 Identities=10% Similarity=0.039 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
.|-..++.+++.++++..++++|||+.+|+.+- +. +|.. +++.. ++ +++++ .++ +++.+..
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml-~~---ag~~-vam~N--a~-~~lk~-~A~--~v~~~~~ 250 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEML-KM---ARYS-FAMGN--AA-ENIKQ-IAR--YATDDNN 250 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-HH---CSEE-EECTT--CC-HHHHH-HCS--EECCCGG
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHH-Hh---CCeE-EEeCC--CC-HHHHH-hCC--EEcCCCC
Confidence 688899999999999999999999999999999 88 8853 33533 33 44444 336 7777744
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=95.47 E-value=0.039 Score=43.01 Aligned_cols=59 Identities=12% Similarity=0.036 Sum_probs=45.2
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
.|...+..+++.++++..++++|||+.+|+.+- +. +|. .+++. .++++ +++ .++ +++.+
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml-~~---a~~-~va~~--na~~~-~k~-~a~--~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAML-SN---FKY-SFAVA--NATDS-AKS-HAK--CVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH-HS---CSE-EEECT--TCCHH-HHH-HSS--EECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHH-Hh---CCc-EEEeC--CCCHH-HHH-hCC--EEECC
Confidence 778899999999998999999999999999999 88 885 44554 34444 433 335 77754
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.12 E-value=0.0018 Score=49.72 Aligned_cols=90 Identities=8% Similarity=-0.083 Sum_probs=64.0
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCC--CChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--GPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~--kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
+..-||+.++|+ .+.+.++|-|+..+++++.+++. ++-...|......+. ......+. -+...+-+..++++|+
T Consensus 54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~-ldp~~~~~~~~~r~~c~~~~~~~~K-dL~~l~~~l~~vvivD 131 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGNYVK-DLSRLGRDLRRVLILD 131 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCSSCCEEEEECGGGSEEETTEEEC-CGGGSCSCGGGEEEEC
T ss_pred EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHH-hccCCceeEEEEeeeeeecCCcccc-cHhhcCCCHHHeEEEc
Confidence 456899999999 88899999999999999999999 988888877765541 11111111 1223333567889999
Q ss_pred CChhhHHHhhccCccCCceE
Q 027821 164 DRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~ 183 (218)
|++.-...- -. +|+.+
T Consensus 132 d~~~~~~~~-~~---N~I~I 147 (181)
T d1ta0a_ 132 NSPASYVFH-PD---NAVPV 147 (181)
T ss_dssp SCGGGGTTC-GG---GBCCC
T ss_pred CChhhhhcC-cc---CeeEe
Confidence 999877654 44 55543
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=95.01 E-value=0.018 Score=45.17 Aligned_cols=62 Identities=10% Similarity=-0.032 Sum_probs=46.4
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.|-..++.+++.++++..++++|||+.+|+.+- +. +|. .+++ +-.+ ++++. .++ +++.+..+
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml-~~---~~~-~~am--~na~-~~lk~-~a~--~i~~~~~~ 258 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMI-EY---AGV-GVAV--DNAI-PSVKE-VAN--FVTKSNLE 258 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH-HH---SSE-EEEC--TTSC-HHHHH-HCS--EECCCTTT
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHH-Hh---CCc-EEEe--CCCC-HHHHH-hCC--EEcCCCCc
Confidence 678899999999888889999999999999999 88 884 3444 4344 44444 335 77766443
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=93.80 E-value=0.044 Score=42.24 Aligned_cols=52 Identities=8% Similarity=-0.093 Sum_probs=41.3
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
.|-..++.+++..+++..++++|||+.+|+.+- +. +|. .++| |-.+++..+.
T Consensus 162 ~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml-~~---~~~-~vav--~na~~~lk~~ 213 (244)
T d1s2oa1 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLF-ET---SAR-GVIV--RNAQPELLHW 213 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH-TS---SSE-EEEC--TTCCHHHHHH
T ss_pred chhHHHHHHHHhccCChhhEEEEcCCCCCHHHH-hh---CCc-EEEe--CCCCHHHHHH
Confidence 678889999999999899999999999999999 88 884 4445 4445544443
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=92.91 E-value=0.08 Score=39.54 Aligned_cols=61 Identities=10% Similarity=0.078 Sum_probs=43.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
.|-..++.++.. .++++|||+.+|+.+= +. +|. .++|.-|-. +..++ +.+.++.|+.++||
T Consensus 159 ~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf-~~---~~~-~~av~~g~~------~~~A~--~~~~~~~ev~~~l~ 219 (229)
T d1u02a_ 159 NKGSAIRSVRGE-----RPAIIAGDDATDEAAF-EA---NDD-ALTIKVGEG------ETHAK--FHVADYIEMRKILK 219 (229)
T ss_dssp CHHHHHHHHHTT-----SCEEEEESSHHHHHHH-HT---TTT-SEEEEESSS------CCCCS--EEESSHHHHHHHHH
T ss_pred CHHHHHHHHhcc-----ccceeecCCCChHHHH-hc---cCC-eEEEEeCCC------CccCe--EEcCCHHHHHHHHH
Confidence 677788888753 4679999999999998 77 653 445544532 13456 88999999877664
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=91.07 E-value=0.086 Score=39.92 Aligned_cols=42 Identities=14% Similarity=0.043 Sum_probs=33.5
Q ss_pred ChHHHHHHHHhcC-CCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 140 PKVEVLKQLQKKP-ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 140 pkPe~l~~l~~~~-~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
.|...+..++..+ ...+.+++.|||+.||+.+- +. +| ..++|
T Consensus 179 ~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml-~~---a~-~~va~ 221 (243)
T d1wzca1 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMF-EV---VD-KVFIV 221 (243)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHH-TT---SS-EEEEE
T ss_pred ccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHH-Hc---CC-cEEEe
Confidence 6777777777665 35678999999999999999 88 88 45556
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=89.05 E-value=0.16 Score=39.26 Aligned_cols=46 Identities=15% Similarity=0.203 Sum_probs=39.4
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG 135 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g 135 (218)
.+-|.+.++|+ ++|++++|||+++...+..+++. +++...++.+++
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~-l~l~~~~~~~i~ 69 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKE-LHMEQPGDYCIT 69 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHH-TTCCSTTCEEEE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-hcCcCCCcEEEE
Confidence 34567788888 88999999999999999999999 999988887664
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=83.03 E-value=1.6 Score=30.51 Aligned_cols=45 Identities=16% Similarity=0.175 Sum_probs=34.6
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHH---HHHHHhcCCCCCCceE
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFAD---ALLRELAGVTIPPDRI 133 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~---~iL~~~~gl~~~Fd~I 133 (218)
....|+|++.++|+ ++|.++.+.|+++..... .-|++ .|+. |+.+
T Consensus 18 ~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~-~~i~--yd~i 68 (122)
T d2obba1 18 RIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-RGLE--FYAA 68 (122)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-TTCC--CSEE
T ss_pred ccccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHH-cCCC--ceeh
Confidence 34579999999999 899999999999876544 44555 5554 6666
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.95 E-value=0.58 Score=34.50 Aligned_cols=41 Identities=15% Similarity=0.007 Sum_probs=33.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCCh----hhHHHhhccCccCCceEEEEe
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRL----ATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~----~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.|-..++.++.. +.+++++|||+. ||+++= ++ ||...++|.
T Consensus 185 sKg~al~~L~~~---~~~ev~afGD~~~~G~ND~eml-~~---a~~~~~av~ 229 (244)
T d2fuea1 185 DKRYCLDSLDQD---SFDTIHFFGNETSPGGNDFEIF-AD---PRTVGHSVV 229 (244)
T ss_dssp STTHHHHHHTTS---CCSEEEEEESCCSTTSTTHHHH-HS---TTSEEEECS
T ss_pred cHHHHHHHHhcC---ChhhEEEEcCCCCCCCCcHHHH-Hc---CCCcEEEcC
Confidence 677788887753 678999999985 999999 98 998888884
|