Citrus Sinensis ID: 027852

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHIFFRSENENR
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccHHHccc
Coil and Loop (DISEMBL)
magtdndkplTKISESFKELAATVNSQAADVELAAFSRACsyvsplfgclGIAFKFAEMDYVAKVDDLAEASKSILTLQSVidrdiegncvrkagshtrnLLRVKRGLDMVRVLFEQILAAegnslkdpaskaytqvfapHHGWAIRKAVAAGMYALPTRAQLLRKLnedgesypMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHIFFRSENENR
Flexible Loop (DISEMBL)
magtdndkpltKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILtlqsvidrdiegncvrkagshtrnllrvkrGLDMVRVLFEQILAAegnslkdpaSKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHIFFRSENENR
Low Complexity Region (SEG)
MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHIFFRSENENR
Disordered region (IsUnstruct)
**********************TVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHIFFR******
Disordered Region (DISOPRED)
**********TKISESFKE**********DVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIE*****K*GSHTRNLLRVKRGLDMVRVLFEQIL*****SLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNED**SYPMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHIF*R******
Disordered Region (DISEMBL)
MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHIFFRSENENR
Disordered Region (DISPRO)
******DKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHIFFRS*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHIFFRSENENR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	218	2.2.26 [Sep-21-2011]
A2BG43	209	Glycolipid transfer prote	yes	no	0.788	0.822	0.273	1e-10
Q6DBQ8	211	Glycolipid transfer prote	no	no	0.747	0.772	0.276	4e-10
P68266	209	Glycolipid transfer prote	yes	no	0.637	0.665	0.276	3e-09
P68265	209	Glycolipid transfer prote	yes	no	0.637	0.665	0.276	3e-09
B0YN54	209	Glycolipid transfer prote	yes	no	0.637	0.665	0.276	4e-09
Q9NZD2	209	Glycolipid transfer prote	yes	no	0.637	0.665	0.276	4e-09
D3ZY60	520	Pleckstrin homology domai	yes	no	0.697	0.292	0.253	7e-09
O95397	391	Putative protein PLEKHA9	no	no	0.628	0.350	0.258	1e-08
Q96JA3	519	Pleckstrin homology domai	no	no	0.720	0.302	0.251	2e-08
D2KC46	519	Pleckstrin homology domai	no	no	0.628	0.263	0.258	2e-08

>sp|A2BG43|GLTP_DANRE Glycolipid transfer protein OS=Danio rerio GN=gltp PE=3 SV=1

 Score = 66.6 bits (161), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 18/190 (9%)

Query: 13  ISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIA-FKFAEMDYVAKVDDLAEA 71
           +   F++L A        VE   F  A S++ P F CLG A F   + D    +  +   
Sbjct: 5   MEHQFRQLPAD-----KQVETRPFLEAVSHLPPFFDCLGSAVFSPIKADIAGNITKIKAV 59

Query: 72  SKS----ILTLQSVID--RDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEG-- 123
             S      TLQ +++  +++ G    K G+ T  L+ +KRGL  ++VL + ++  +   
Sbjct: 60  YDSNPTRFKTLQQILEAEKEMHGAEWPKVGA-TLALMWLKRGLRFIQVLLQSLVDGDKDD 118

Query: 124 ---NSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLF 180
              N +K   +KAY      +HGW ++K   A +YA P R+  LR L++  E      L 
Sbjct: 119 NNPNLIKVNVTKAYEMALKKYHGWIVQKLFQAALYAAPYRSDFLRALSKGREVKDEECLD 178

Query: 181 LLSNMILTFT 190
            +   ++ FT
Sbjct: 179 KVRQFLVNFT 188

Accelerates the intermembrane transfer of various glycolipids. Catalyzes the transfer of various glycosphingolipids between membranes but does not catalyze the transfer of phospholipids. May be involved in the intracellular translocation of glucosylceramides.
Danio rerio (taxid: 7955)

>sp|Q6DBQ8|GLTD1_DANRE Glycolipid transfer protein domain-containing protein 1 OS=Danio rerio GN=gltpd1 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 25/188 (13%)

Query: 10  LTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDL- 68
           L ++ E+F+    +  S+  +V +  +      +      LG  F F   D V+K+  L 
Sbjct: 7   LQRVLETFR----SSLSENKEVYIKYYIAGWQELVSFMNSLGNVFSFISKDVVSKIQILE 62

Query: 69  ----AEASKSILTLQSVIDRDIEGNCV--RKAGSH----TRNLLRVKRGLDMVRVLFEQI 118
                E   + +T+QS++  ++E + V   K GSH     R LLR+ R L  + +  E++
Sbjct: 63  NFLSGENGSNYVTIQSMVKYELENDLVDLTKRGSHPESGCRTLLRLHRALRWLELFLERL 122

Query: 119 -LAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNED------- 170
             + E +      S AY +  A HH W IRKAV     ALP R      +N         
Sbjct: 123 RTSTEDSKTSVMCSDAYNESLANHHPWLIRKAVGVAFCALPGRETFFDVMNAGDHTQVVA 182

Query: 171 --GESYPM 176
             GES P+
Sbjct: 183 LLGESLPL 190

Danio rerio (taxid: 7955)

>sp|P68266|GLTP_PIG Glycolipid transfer protein OS=Sus scrofa GN=GLTP PE=1 SV=2

 Score = 62.0 bits (149), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 13/152 (8%)

Query: 30  DVELAAFSRACSYVSPLFGCLG-IAFKFAEMDY---VAKVDDLAEASKSIL-TLQSV--I 82
            +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  +
Sbjct: 17  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFRTLQNILEV 76

Query: 83  DRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE-----GNSLKDPASKAYTQV 137
           ++++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY   
Sbjct: 77  EKEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMA 135

Query: 138 FAPHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
              +HGW ++K   A +YA P ++  L+ L++
Sbjct: 136 LKKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

Accelerates the intermembrane transfer of various glycolipids. Catalyzes the transfer of various glycosphingolipids between membranes but does not catalyze the transfer of phospholipids. May be involved in the intracellular translocation of glucosylceramides.

Sus scrofa (taxid: 9823)

>sp|P68265|GLTP_BOVIN Glycolipid transfer protein OS=Bos taurus GN=GLTP PE=1 SV=2

 Score = 62.0 bits (149), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 13/152 (8%)

Query: 30  DVELAAFSRACSYVSPLFGCLG-IAFKFAEMDY---VAKVDDLAEASKSIL-TLQSV--I 82
            +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  +
Sbjct: 17  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFRTLQNILEV 76

Query: 83  DRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE-----GNSLKDPASKAYTQV 137
           ++++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY   
Sbjct: 77  EKEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMA 135

Query: 138 FAPHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
              +HGW ++K   A +YA P ++  L+ L++
Sbjct: 136 LKKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

Accelerates the intermembrane transfer of various glycolipids. Catalyzes the transfer of various glycosphingolipids between membranes but does not catalyze the transfer of phospholipids. May be involved in the intracellular translocation of glucosylceramides.

Bos taurus (taxid: 9913)

>sp|B0YN54|GLTP_PANTR Glycolipid transfer protein OS=Pan troglodytes GN=GLTP PE=2 SV=1

 Score = 61.6 bits (148), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 13/152 (8%)

Query: 30  DVELAAFSRACSYVSPLFGCLG-IAFKFAEMDY---VAKVDDLAEASKSIL-TLQSV--I 82
            +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  +
Sbjct: 17  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEV 76

Query: 83  DRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE-----GNSLKDPASKAYTQV 137
           ++++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY   
Sbjct: 77  EKEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMA 135

Query: 138 FAPHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
              +HGW ++K   A +YA P ++  L+ L++
Sbjct: 136 LKKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

Accelerates the intermembrane transfer of various glycolipids. Catalyzes the transfer of various glycosphingolipids between membranes but does not catalyze the transfer of phospholipids. May be involved in the intracellular translocation of glucosylceramides.

Pan troglodytes (taxid: 9598)

>sp|Q9NZD2|GLTP_HUMAN Glycolipid transfer protein OS=Homo sapiens GN=GLTP PE=1 SV=3

 Score = 61.6 bits (148), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 13/152 (8%)

Query: 30  DVELAAFSRACSYVSPLFGCLG-IAFKFAEMDY---VAKVDDLAEASKSIL-TLQSV--I 82
            +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  +
Sbjct: 17  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEV 76

Query: 83  DRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE-----GNSLKDPASKAYTQV 137
           ++++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY   
Sbjct: 77  EKEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMA 135

Query: 138 FAPHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
              +HGW ++K   A +YA P ++  L+ L++
Sbjct: 136 LKKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

Accelerates the intermembrane transfer of various glycolipids. Catalyzes the transfer of various glycosphingolipids between membranes but does not catalyze the transfer of phospholipids. May be involved in the intracellular translocation of glucosylceramides.

Homo sapiens (taxid: 9606)

>sp|D3ZY60|PKHA8_RAT Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus GN=Plekha8 PE=3 SV=1

 Score = 60.8 bits (146), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 14/166 (8%)

Query: 7   DKPLTKISESFKELAATVNSQAADVEL--------AAFSRACSYVSPLFGCLG-IAFKFA 57
           + P     E      +T+N+  +D+EL         AF  +C  V P+   LG   F   
Sbjct: 299 ESPWEDSEEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPV 358

Query: 58  EMDYVAKVDDLAEA----SKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRV 113
           +MD V  +  + +      +   TLQ ++  ++E +  R   S T  LL +KRGL  ++ 
Sbjct: 359 KMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVARVRNSATEALLWLKRGLKFLKG 418

Query: 114 LFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPT 159
              ++   E + ++   + AY +    HHGW +R   A  + A P+
Sbjct: 419 FLTEVKNGEKD-IQTALNNAYGKTLRQHHGWVVRGVFALALRAAPS 463

Cargo transport protein that is required for apical transport from the trans-Golgi network (TGN). Transports AQP2 from the trans-Golgi network (TGN) to sites of AQP2 phosphorylation. Mediates the non-vesicular transport of glucosylceramide (GlcCer) from the trans-Golgi network (TGN) to the plasma membrane and plays a pivotal role in the synthesis of complex glycosphingolipids. Binding of both phosphatidylinositol 4-phosphate (PIP) and ARF1 are essential for the GlcCer transfer ability. Also required for primary cilium formation, possibly by being involved in the transport of raft lipids to the apical membrane, and for membrane tubulation.

Rattus norvegicus (taxid: 10116)

>sp|O95397|PKHA9_HUMAN Putative protein PLEKHA9 OS=Homo sapiens GN=PLEKHA8P1 PE=5 SV=1

 Score = 60.5 bits (145), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 14/151 (9%)

Query: 22  ATVNSQAADVEL--------AAFSRACSYVSPLFGCLG-IAFKFAEMDYVAKVDDLAEA- 71
           +T+N+  +D+EL         AF  +C  V P+   LG   F   +MD V  +  + +  
Sbjct: 197 STMNTSFSDIELLEDSGIPTEAFLASCCAVVPVLDKLGPTVFAPVKMDLVENIKKVNQKY 256

Query: 72  ---SKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKD 128
               +   TLQ ++  ++E +  +   S T  LL +KRGL  ++    ++   E + ++ 
Sbjct: 257 ITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLTEVKNGEKD-IQT 315

Query: 129 PASKAYTQVFAPHHGWAIRKAVAAGMYALPT 159
             + AY +    HHGW +R   A  + A P+
Sbjct: 316 ALNNAYGKTLRQHHGWVVRGVFALALRATPS 346

Homo sapiens (taxid: 9606)

>sp|Q96JA3|PKHA8_HUMAN Pleckstrin homology domain-containing family A member 8 OS=Homo sapiens GN=PLEKHA8 PE=1 SV=3

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 18/175 (10%)

Query: 2   AGTDNDKPLTKISESFKELA----ATVNSQAADVEL--------AAFSRACSYVSPLFGC 49
           +G+D+      + E  KE+     +T+N+  +D+EL         AF  +C  V P+   
Sbjct: 289 SGSDSSCSPECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDK 348

Query: 50  LG-IAFKFAEMDYVAKVDDLAEA----SKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRV 104
           LG   F   +MD V  +  + +      +   TLQ ++  ++E +  +   S T  LL +
Sbjct: 349 LGPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWL 408

Query: 105 KRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPT 159
           KRGL  ++    ++   E + ++   + AY +    HHGW +R   A  + A P+
Sbjct: 409 KRGLKFLKGFLTEVKNGEKD-IQTALNNAYGKTLRQHHGWVVRGVFALALRAAPS 462

Involved in TGN-to-plasma membrane transport and in the formation of post-Golgi constitutive carriers. May play a role in ensuring the coordination of the budding and the fission reactions.

Homo sapiens (taxid: 9606)

>sp|D2KC46|PKHA8_CANFA Pleckstrin homology domain-containing family A member 8 OS=Canis familiaris GN=PLEKHA8 PE=1 SV=2

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 14/151 (9%)

Query: 22  ATVNSQAADVEL--------AAFSRACSYVSPLFGCLG-IAFKFAEMDYVAKVDDLAEA- 71
           +T+N+  +D+EL         AF  +C  V P+   LG   F   +MD V  +  + +  
Sbjct: 313 STMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMDLVGNIKKVNQKY 372

Query: 72  ---SKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKD 128
               +   TLQ ++  ++E +  +   S T  LL +KRGL  ++    ++   E + ++ 
Sbjct: 373 ITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLTEVKNGEKD-IQT 431

Query: 129 PASKAYTQVFAPHHGWAIRKAVAAGMYALPT 159
             + AY +    HHGW +R   A  + A P+
Sbjct: 432 ALNNAYGKTLRQHHGWVVRGVFALALRAAPS 462

Cargo transport protein that is required for apical transport from the trans-Golgi network (TGN). Transports AQP2 from the trans-Golgi network (TGN) to sites of AQP2 phosphorylation. Mediates the non-vesicular transport of glucosylceramide (GlcCer) from the trans-Golgi network (TGN) to the plasma membrane and plays a pivotal role in the synthesis of complex glycosphingolipids. Binding of both phosphatidylinositol 4-phosphate (PIP) and ARF1 are essential for the GlcCer transfer ability. Also required for primary cilium formation, possibly by being involved in the transport of raft lipids to the apical membrane, and for membrane tubulation.

Canis familiaris (taxid: 9615)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
224090181	205	predicted protein [Populus trichocarpa]	0.793	0.843	0.786	3e-75
255584612	212	conserved hypothetical protein [Ricinus	0.866	0.891	0.712	3e-74
449443730	204	PREDICTED: glycolipid transfer protein d	0.784	0.838	0.766	9e-73
312283539	206	unnamed protein product [Thellungiella h	0.779	0.825	0.777	1e-72
224096286	205	predicted protein [Populus trichocarpa]	0.793	0.843	0.768	7e-72
297823255	206	hypothetical protein ARALYDRAFT_482433 [	0.779	0.825	0.760	5e-70
225444015	205	PREDICTED: glycolipid transfer protein d	0.779	0.829	0.735	3e-69
15226804	206	glycolipid transfer protein-like protein	0.779	0.825	0.742	6e-68
351724037	206	uncharacterized protein LOC100499750 [Gl	0.793	0.839	0.712	1e-67
351726500	208	uncharacterized protein LOC100305964 [Gl	0.793	0.831	0.727	4e-67

>gi|224090181|ref|XP_002308949.1| predicted protein [Populus trichocarpa] gi|222854925|gb|EEE92472.1| predicted protein [Populus trichocarpa]

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 136/173 (78%), Positives = 150/173 (86%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           M   + +KPL KI+E+FKEL AT+ SQ  +VE+A FS ACS VSPLFGCLGIAFKFAEMD
Sbjct: 1   MGDLETEKPLKKIAEAFKELEATIKSQTQEVEVAPFSHACSLVSPLFGCLGIAFKFAEMD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKV DLAEASKSI TLQSV+D+D+E N VRK GSH+RNLLRVKRGLDMVRVLFEQI+ 
Sbjct: 61  YVAKVHDLAEASKSIGTLQSVLDKDVERNSVRKGGSHSRNLLRVKRGLDMVRVLFEQIMV 120

Query: 121 AEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGES 173
            EGNSLK PASKAY QVFAPHHGWAIRKAVAAGMYALPT+AQLL+KLNED  S
Sbjct: 121 TEGNSLKGPASKAYAQVFAPHHGWAIRKAVAAGMYALPTKAQLLKKLNEDESS 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584612|ref|XP_002533030.1| conserved hypothetical protein [Ricinus communis] gi|223527192|gb|EEF29361.1| conserved hypothetical protein [Ricinus communis]

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 141/198 (71%), Positives = 160/198 (80%), Gaps = 9/198 (4%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQ-------AADVELAAFSRACSYVSPLFGCLGIA 53
           MA  +  KPL KI+E+FKELA T+NSQ       +AD+E+A FSRACS VSPLFGCLGIA
Sbjct: 1   MADFEIQKPLRKIAEAFKELAVTLNSQTMASSTSSADLEVAPFSRACSLVSPLFGCLGIA 60

Query: 54  FKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRV 113
           FKFAEMDYV+KV DL EASKSI T+Q ++++DIE NCVRKAGSH+RNLLRVKRGLDMV+V
Sbjct: 61  FKFAEMDYVSKVRDLGEASKSIGTIQEMVNKDIEENCVRKAGSHSRNLLRVKRGLDMVKV 120

Query: 114 LFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGES 173
           LFEQIL  EGNSLKDPASKAY QVFAPHHGWAIRKAVAAGMYALPT++QLL KLNED  S
Sbjct: 121 LFEQILITEGNSLKDPASKAYAQVFAPHHGWAIRKAVAAGMYALPTKSQLLNKLNEDESS 180

Query: 174 --YPMTYLFLLSNMILTF 189
               M Y    S  ++ F
Sbjct: 181 AKIQMEYYIAASAPVILF 198

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443730|ref|XP_004139630.1| PREDICTED: glycolipid transfer protein domain-containing protein 1-like [Cucumis sativus] gi|449475397|ref|XP_004154440.1| PREDICTED: glycolipid transfer protein domain-containing protein 1-like [Cucumis sativus]

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 131/171 (76%), Positives = 148/171 (86%)

Query: 3   GTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYV 62
           G   +KPL  ISESFK LAA +NS    VE+A FSRACS++SPLFGCLGIAFKFAEMDYV
Sbjct: 2   GDLGEKPLQNISESFKALAANINSGNTTVEVAPFSRACSFISPLFGCLGIAFKFAEMDYV 61

Query: 63  AKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE 122
           AKV+DL E+SKSI++LQ+++D+DIE +CVRKAGSH+RNLLRVKRGLDMVRVLFEQIL  E
Sbjct: 62  AKVNDLVESSKSIVSLQALLDKDIESDCVRKAGSHSRNLLRVKRGLDMVRVLFEQILLTE 121

Query: 123 GNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGES 173
           GNSL+DPASKAY QVFAPHHGWAIRKAV AGMYALPT+ QLL KL ED  S
Sbjct: 122 GNSLRDPASKAYAQVFAPHHGWAIRKAVGAGMYALPTKGQLLSKLKEDEAS 172

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312283539|dbj|BAJ34635.1| unnamed protein product [Thellungiella halophila]

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/171 (77%), Positives = 150/171 (87%), Gaps = 1/171 (0%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           MA +D ++PL KIS +FKELAATVNS + +V +A FS ACS VSPLFGCLGIAFKFAEMD
Sbjct: 1   MADSDAERPLRKISTAFKELAATVNSPSPEVPVAQFSHACSLVSPLFGCLGIAFKFAEMD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKV+DLA AS S+ TL  ++D+DIE NCVRKAGSHTRNLLRVKRGLDMVRVLFEQI+A
Sbjct: 61  YVAKVNDLARASSSVSTLLVMVDKDIEANCVRKAGSHTRNLLRVKRGLDMVRVLFEQIIA 120

Query: 121 AEG-NSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNED 170
           +EG NSLKDPASK+Y QVFAPHHGWAIRKAV+ GMYALPTRA LL+ LNED
Sbjct: 121 SEGDNSLKDPASKSYAQVFAPHHGWAIRKAVSVGMYALPTRAHLLKMLNED 171

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096286|ref|XP_002334703.1| predicted protein [Populus trichocarpa] gi|224138046|ref|XP_002322716.1| predicted protein [Populus trichocarpa] gi|222867346|gb|EEF04477.1| predicted protein [Populus trichocarpa] gi|222874212|gb|EEF11343.1| predicted protein [Populus trichocarpa]

 Score =  275 bits (704), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 133/173 (76%), Positives = 149/173 (86%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           M   D  KPL KI+E+FKEL AT+NSQ+ +VE+A FS ACS VSPLFGCLGIAFKFAE+D
Sbjct: 1   MGDLDTAKPLRKIAEAFKELEATINSQSQEVEVAPFSHACSLVSPLFGCLGIAFKFAEVD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKV DLAEASKSI TLQS++++DI+GN VRK+GSH+RNLLRVKRGL MV+VLFE IL 
Sbjct: 61  YVAKVLDLAEASKSIGTLQSLLEKDIQGNSVRKSGSHSRNLLRVKRGLVMVKVLFELILV 120

Query: 121 AEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGES 173
            EGNSLK PASKAY QVFAPHHGWAIRKAVAAGMYALPT+AQLL  LNED  S
Sbjct: 121 TEGNSLKGPASKAYEQVFAPHHGWAIRKAVAAGMYALPTKAQLLNNLNEDESS 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823255|ref|XP_002879510.1| hypothetical protein ARALYDRAFT_482433 [Arabidopsis lyrata subsp. lyrata] gi|297325349|gb|EFH55769.1| hypothetical protein ARALYDRAFT_482433 [Arabidopsis lyrata subsp. lyrata]

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 130/171 (76%), Positives = 144/171 (84%), Gaps = 1/171 (0%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           MA +D DKPL KIS +FKELA  VNS + +V +A FS ACS VSPLFGCLGIAFKFAEMD
Sbjct: 1   MADSDADKPLRKISTAFKELAVIVNSPSPEVPVAQFSHACSLVSPLFGCLGIAFKFAEMD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKVDDL  AS SI TL  ++D+DIE NCVRK GSHTRNLLRVKRGLDMV+VLFEQI+A
Sbjct: 61  YVAKVDDLVRASSSISTLVVMMDKDIEANCVRKPGSHTRNLLRVKRGLDMVKVLFEQIIA 120

Query: 121 AEG-NSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNED 170
           +EG NSLKDPA+K+Y QVFAPHHGWAIRKAV+ GMYALPTRA LL  L ED
Sbjct: 121 SEGDNSLKDPATKSYAQVFAPHHGWAIRKAVSLGMYALPTRAHLLNMLKED 171

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444015|ref|XP_002281564.1| PREDICTED: glycolipid transfer protein domain-containing protein 1 isoform 1 [Vitis vinifera] gi|297740811|emb|CBI30993.3| unnamed protein product [Vitis vinifera]

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 125/170 (73%), Positives = 145/170 (85%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           M   D DK L KI E+FKE+A+ VNSQ  D+E+A FS ACS VSPLFGCLGIAFKFAEMD
Sbjct: 1   MEDGDGDKALRKIGEAFKEIASAVNSQTVDIEVAPFSHACSLVSPLFGCLGIAFKFAEMD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKV+DLA+ S SI TL +++D DIEGNCVRKAGS++RNLLRVKRGLDMVRVLFE +LA
Sbjct: 61  YVAKVNDLAKTSSSISTLSALLDHDIEGNCVRKAGSNSRNLLRVKRGLDMVRVLFEHMLA 120

Query: 121 AEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNED 170
           ++ NSL++PAS AY +V APHHGWAIRKAVAAGMY LPT+AQLL +LNED
Sbjct: 121 SDDNSLRNPASTAYAEVLAPHHGWAIRKAVAAGMYVLPTKAQLLARLNED 170

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226804|ref|NP_181016.1| glycolipid transfer protein-like protein [Arabidopsis thaliana] gi|3132476|gb|AAC16265.1| unknown protein [Arabidopsis thaliana] gi|45752746|gb|AAS76271.1| At2g34690 [Arabidopsis thaliana] gi|330253916|gb|AEC09010.1| glycolipid transfer protein-like protein [Arabidopsis thaliana]

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 127/171 (74%), Positives = 143/171 (83%), Gaps = 1/171 (0%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           MA ++ DKPL KIS +FK+LA  VNS   +V +  FS ACS VSPLFGCLGIAFKFAEMD
Sbjct: 1   MADSEADKPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKVDDL  AS SI TL  ++D+DIE +CVRKAGSHTRNLLRVKRGLDMV+VLFEQI+A
Sbjct: 61  YVAKVDDLVRASSSISTLVVMMDKDIEADCVRKAGSHTRNLLRVKRGLDMVKVLFEQIIA 120

Query: 121 AEG-NSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNED 170
           +EG NSLKDPA+K+Y QVFAPHHGWAIRKAV+ GMYALPTRA LL  L ED
Sbjct: 121 SEGDNSLKDPATKSYAQVFAPHHGWAIRKAVSLGMYALPTRAHLLNMLKED 171

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724037|ref|NP_001235508.1| uncharacterized protein LOC100499750 [Glycine max] gi|255626261|gb|ACU13475.1| unknown [Glycine max]

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 124/174 (71%), Positives = 147/174 (84%), Gaps = 1/174 (0%)

Query: 1   MAGTDNDKPLTKISESFKELAATV-NSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEM 59
           MA  + DK L +I+E+FK+LA  V +SQ+A+V+++ FS ACS VSPLFGCLG+AFKFAEM
Sbjct: 1   MAEGNGDKTLRRIAEAFKDLANVVTDSQSAEVKVSPFSHACSLVSPLFGCLGVAFKFAEM 60

Query: 60  DYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQIL 119
           DYVAKV+DL EASK +  LQS+I+ D++ N VRK GSHTRNLLRVKRGLDMVRVLFEQIL
Sbjct: 61  DYVAKVNDLVEASKCVQNLQSLIELDVQANTVRKGGSHTRNLLRVKRGLDMVRVLFEQIL 120

Query: 120 AAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGES 173
             EGNSL++PASKAY QVFAPHHGWAIRKAV+ GMY LPT+ QLL+KLNED  S
Sbjct: 121 VTEGNSLRNPASKAYEQVFAPHHGWAIRKAVSVGMYVLPTKEQLLKKLNEDEAS 174

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726500|ref|NP_001235593.1| uncharacterized protein LOC100305964 [Glycine max] gi|255627131|gb|ACU13910.1| unknown [Glycine max]

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 128/176 (72%), Positives = 146/176 (82%), Gaps = 3/176 (1%)

Query: 1   MAGTDNDKPLTKISESFKELAAT-VNSQAADVEL--AAFSRACSYVSPLFGCLGIAFKFA 57
           M   + DK L KI+++F +LA    +SQ+A+ E+  A FS ACS VSPLFGCLG+AFKFA
Sbjct: 1   MTEGNGDKTLRKIADAFNDLANVFTDSQSAEAEVKVAPFSHACSLVSPLFGCLGVAFKFA 60

Query: 58  EMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQ 117
           EMDYVAKV DLAEASKSI  LQS+I+ D++ N VRK GSHTRNLLRVKRGLDMVRVLFEQ
Sbjct: 61  EMDYVAKVHDLAEASKSIQNLQSLIELDVQANTVRKGGSHTRNLLRVKRGLDMVRVLFEQ 120

Query: 118 ILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGES 173
           IL  EGNSL+DPASKAY QVFAPHHGWAIRKAV+AGMYALPT+ QLL+KLNED  S
Sbjct: 121 ILVTEGNSLRDPASKAYEQVFAPHHGWAIRKAVSAGMYALPTKEQLLKKLNEDEAS 176

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
TAIR|locus:2061529	206	ACD11 "ACCELERATED CELL DEATH	0.779	0.825	0.742	1.8e-62
TAIR|locus:2135252	229	AT4G39670 [Arabidopsis thalian	0.756	0.720	0.543	2.2e-43
FB|FBgn0050392	223	CG30392 [Drosophila melanogast	0.715	0.699	0.313	5.4e-15
ZFIN|ZDB-GENE-060526-266	209	gltpa "glycolipid transfer pro	0.729	0.760	0.284	1.2e-12
ZFIN|ZDB-GENE-091118-80	209	gltpb "glycolipid transfer pro	0.752	0.784	0.259	1.7e-11
ZFIN|ZDB-GENE-040801-240	211	gltpd1 "glycolipid transfer pr	0.711	0.734	0.280	3.5e-11
UNIPROTKB|P68265	209	GLTP "Glycolipid transfer prot	0.633	0.660	0.278	1.1e-10
UNIPROTKB|E2R7T7	209	TRPV4 "Uncharacterized protein	0.633	0.660	0.278	1.1e-10
UNIPROTKB|Q9NZD2	209	GLTP "Glycolipid transfer prot	0.633	0.660	0.278	1.1e-10
UNIPROTKB|F1RIT0	209	GLTP "Glycolipid transfer prot	0.633	0.660	0.278	1.1e-10

TAIR|locus:2061529 ACD11 "ACCELERATED CELL DEATH 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 127/171 (74%), Positives = 143/171 (83%)

Query:     1 MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
             MA ++ DKPL KIS +FK+LA  VNS   +V +  FS ACS VSPLFGCLGIAFKFAEMD
Sbjct:     1 MADSEADKPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMD 60

Query:    61 YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
             YVAKVDDL  AS SI TL  ++D+DIE +CVRKAGSHTRNLLRVKRGLDMV+VLFEQI+A
Sbjct:    61 YVAKVDDLVRASSSISTLVVMMDKDIEADCVRKAGSHTRNLLRVKRGLDMVKVLFEQIIA 120

Query:   121 AEG-NSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNED 170
             +EG NSLKDPA+K+Y QVFAPHHGWAIRKAV+ GMYALPTRA LL  L ED
Sbjct:   121 SEGDNSLKDPATKSYAQVFAPHHGWAIRKAVSLGMYALPTRAHLLNMLKED 171

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0017089 "glycolipid transporter activity" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

GO:0051861 "glycolipid binding" evidence=IEA

GO:0008219 "cell death" evidence=IMP

GO:0009751 "response to salicylic acid stimulus" evidence=IMP

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IMP

GO:0010175 "sphingosine transmembrane transporter activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:2135252 AT4G39670 [Arabidopsis thaliana (taxid:3702)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 93/171 (54%), Positives = 122/171 (71%)

Query:     9 PLTKISESFKELAATVNSQAAD------VELAAFSRACSYVSPLFGCLGIAFKFAEMDYV 62
             PL+ I+E+F++LA  V  Q +D      + L  F  AC++VS LF CLG AFKFAEM+Y+
Sbjct:    27 PLSVITEAFEDLADLVKPQRSDEIDEDELRLDDFCSACTHVSVLFNCLGFAFKFAEMEYI 86

Query:    63 AKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE 122
             AKV DL EASK+  TL +++D D+E   V+  GSH+RNL RV++GLD++R +FEQ L A+
Sbjct:    87 AKVKDLVEASKTFETLHNILDLDVEKETVKTPGSHSRNLRRVRQGLDLIRAIFEQFLIAD 146

Query:   123 GNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGES 173
               SLKD A+ AYT+V AP H WA+R AV AGMY LPTR QLL +LNE  +S
Sbjct:   147 DYSLKDAATTAYTEVCAPFHTWAVRTAVYAGMYTLPTRDQLLLRLNETDQS 197

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0017089 "glycolipid transporter activity" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

GO:0051861 "glycolipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006984 "ER-nucleus signaling pathway" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

FB|FBgn0050392 CG30392 [Drosophila melanogaster (taxid:7227)]

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 52/166 (31%), Positives = 78/166 (46%)

Query:    30 DVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDL-------AEASKSILTLQSVI 82
             DV+L A+  A   +   F  +G  F F   D  +K+D L       AE  +   T ++++
Sbjct:    38 DVQLDAYLAAYEEIMKFFQLMGSVFSFVSSDVRSKIDILYALRAKDAEEQEHFNTFRTML 97

Query:    83 DRDIEGNCVRKAG--SHTRNLLRVKRGLDMVRVLFEQILAA-EGNSLKDPASKAYTQVFA 139
             D + E   + + G  S +R LLR+ RGLD V     +I A  +     D   +AY     
Sbjct:    98 DYEKEAQLLTQKGYVSGSRTLLRLHRGLDFVYEFLNRIQAIPDDQKTVDVCKEAYDDTLG 157

Query:   140 PHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLFLLSNM 185
              HH + IRK     MYA+PTR  LL+K+  D E+       +L +M
Sbjct:   158 KHHSFLIRKGARLAMYAMPTRGDLLKKVCSDVEAAKENLPSMLKHM 203

GO:0005737 "cytoplasm" evidence=IEA

GO:0051861 "glycolipid binding" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

GO:0017089 "glycolipid transporter activity" evidence=IEA

ZFIN|ZDB-GENE-060526-266 gltpa "glycolipid transfer protein a" [Danio rerio (taxid:7955)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 49/172 (28%), Positives = 86/172 (50%)

Query:    31 VELAAFSRACSYVSPLFGCLGIA-FKFAEMDY---VAKVDDLAEASKS-ILTLQSVID-- 83
             VE   F  A S++ P F CLG A F   + D    + K+  + +++ +   TLQ +++  
Sbjct:    18 VETRPFLEAVSHLPPFFDCLGSAVFSPIKADIAGNITKIKAVYDSNPTRFKTLQQILEAE 77

Query:    84 RDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEG-----NSLKDPASKAYTQVF 138
             +++ G    K G+ T  L+ +KRGL  ++VL + ++  +      N +K   +KAY    
Sbjct:    78 KEMHGAEWPKVGA-TLALMWLKRGLRFIQVLLQSLVDGDKDDNNPNLIKVNVTKAYEMAL 136

Query:   139 APHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLFLLSNMILTFT 190
               +HGW ++K   A +YA P R+  LR L++  E      L  +   ++ FT
Sbjct:   137 KKYHGWIVQKLFQAALYAAPYRSDFLRALSKGREVKDEECLDKVRQFLVNFT 188

GO:0051861 "glycolipid binding" evidence=IEA

GO:0017089 "glycolipid transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006869 "lipid transport" evidence=IEA

ZFIN|ZDB-GENE-091118-80 gltpb "glycolipid transfer protein b" [Danio rerio (taxid:7955)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 46/177 (25%), Positives = 84/177 (47%)

Query:    26 SQAADVELAAFSRACSYVSPLFGCLGI-AFKFAEMDY---VAKVDDLAEASK-SILTLQS 80
             S   ++    F  + S++ P F CLG   F   + D    + K+  + ++      TLQ 
Sbjct:    13 SDTKEIATKTFLESVSHLPPFFDCLGSKVFAPIKSDINGNITKIKAVYDSDPVKYETLQQ 72

Query:    81 V--IDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEG-----NSLKDPASKA 133
             +  I++   G+   K G+ T  L+ +KRGL  +++L + +   E      N ++   +KA
Sbjct:    73 ILIIEKSSYGSEWPKVGA-TLALMWLKRGLRFIQILLQSLADGERDEDNPNLIRVNITKA 131

Query:   134 YTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLFLLSNMILTFT 190
             Y Q    +HGW ++K   A ++A P R+  L+ L++D E      L  +   ++ FT
Sbjct:   132 YDQALKRYHGWIVQKVFKAALFAAPCRSDFLKALSKDQEVAEEDCLAKVRQFLINFT 188

GO:0017089 "glycolipid transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

GO:0051861 "glycolipid binding" evidence=IEA

ZFIN|ZDB-GENE-040801-240 gltpd1 "glycolipid transfer protein domain containing 1" [Danio rerio (taxid:7955)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 48/171 (28%), Positives = 77/171 (45%)

Query:    10 LTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDL- 68
             L ++ E+F+   +          +A +    S+++ L    G  F F   D V+K+  L 
Sbjct:     7 LQRVLETFRSSLSENKEVYIKYYIAGWQELVSFMNSL----GNVFSFISKDVVSKIQILE 62

Query:    69 ----AEASKSILTLQSVIDRDIEGNCV--RKAGSHT----RNLLRVKRGLDMVRVLFEQI 118
                  E   + +T+QS++  ++E + V   K GSH     R LLR+ R L  + +  E++
Sbjct:    63 NFLSGENGSNYVTIQSMVKYELENDLVDLTKRGSHPESGCRTLLRLHRALRWLELFLERL 122

Query:   119 -LAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLN 168
               + E +      S AY +  A HH W IRKAV     ALP R      +N
Sbjct:   123 RTSTEDSKTSVMCSDAYNESLANHHPWLIRKAVGVAFCALPGRETFFDVMN 173

GO:0051861 "glycolipid binding" evidence=IEA

GO:0017089 "glycolipid transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

UNIPROTKB|P68265 GLTP "Glycolipid transfer protein" [Bos taurus (taxid:9913)]

 Score = 151 (58.2 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 42/151 (27%), Positives = 77/151 (50%)

Query:    31 VELAAFSRACSYVSPLFGCLGI-AFKFAEMDY---VAKVDDLAEASKS-ILTLQSV--ID 83
             +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  ++
Sbjct:    18 IETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFRTLQNILEVE 77

Query:    84 RDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEG-----NSLKDPASKAYTQVF 138
             +++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY    
Sbjct:    78 KEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMAL 136

Query:   139 APHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
               +HGW ++K   A +YA P ++  L+ L++
Sbjct:   137 KKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

GO:0051861 "glycolipid binding" evidence=ISS

GO:0046836 "glycolipid transport" evidence=ISS

GO:0017089 "glycolipid transporter activity" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|E2R7T7 TRPV4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 151 (58.2 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 42/151 (27%), Positives = 77/151 (50%)

Query:    31 VELAAFSRACSYVSPLFGCLGI-AFKFAEMDY---VAKVDDLAEASKS-ILTLQSV--ID 83
             +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  ++
Sbjct:    18 IETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVE 77

Query:    84 RDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEG-----NSLKDPASKAYTQVF 138
             +++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY    
Sbjct:    78 KEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMAL 136

Query:   139 APHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
               +HGW ++K   A +YA P ++  L+ L++
Sbjct:   137 KKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

GO:0051861 "glycolipid binding" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

GO:0017089 "glycolipid transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q9NZD2 GLTP "Glycolipid transfer protein" [Homo sapiens (taxid:9606)]

 Score = 151 (58.2 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 42/151 (27%), Positives = 77/151 (50%)

Query:    31 VELAAFSRACSYVSPLFGCLGI-AFKFAEMDY---VAKVDDLAEASKS-ILTLQSV--ID 83
             +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  ++
Sbjct:    18 IETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVE 77

Query:    84 RDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEG-----NSLKDPASKAYTQVF 138
             +++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY    
Sbjct:    78 KEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMAL 136

Query:   139 APHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
               +HGW ++K   A +YA P ++  L+ L++
Sbjct:   137 KKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

GO:0005737 "cytoplasm" evidence=IEA

GO:0051861 "glycolipid binding" evidence=IDA

GO:0008289 "lipid binding" evidence=IDA

GO:0016020 "membrane" evidence=IC

GO:0017089 "glycolipid transporter activity" evidence=IDA

GO:0046836 "glycolipid transport" evidence=IDA

UNIPROTKB|F1RIT0 GLTP "Glycolipid transfer protein" [Sus scrofa (taxid:9823)]

 Score = 151 (58.2 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 42/151 (27%), Positives = 77/151 (50%)

Query:    31 VELAAFSRACSYVSPLFGCLGI-AFKFAEMDY---VAKVDDLAEASKS-ILTLQSV--ID 83
             +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  ++
Sbjct:    18 IETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVE 77

Query:    84 RDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEG-----NSLKDPASKAYTQVF 138
             +++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY    
Sbjct:    78 KEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMAL 136

Query:   139 APHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
               +HGW ++K   A +YA P ++  L+ L++
Sbjct:   137 KKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

GO:0051861 "glycolipid binding" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

GO:0017089 "glycolipid transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_VI0173 hypothetical protein (206 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	218
pfam08718	148	pfam08718, GLTP, Glycolipid transfer protein (GLTP	3e-48

>gnl|CDD|204041 pfam08718, GLTP, Glycolipid transfer protein (GLTP)

 Score =  155 bits (393), Expect = 3e-48
 Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 5/146 (3%)

Query: 30  DVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKS----ILTLQSVIDRD 85
           D+    F  AC  +   F  LG AF F + D    +  L +  +S      TLQ ++ ++
Sbjct: 2   DIPTKPFLEACEELVKFFDKLGTAFSFVKKDIKGNITKLEKRYESDPEEYKTLQDLVLKE 61

Query: 86  IEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEG-NSLKDPASKAYTQVFAPHHGW 144
            E    +K GS TR LL +KRGLD ++V  E++L       L D  ++AY +   PHHGW
Sbjct: 62  KENGLAKKKGSATRGLLWLKRGLDFIKVFLERLLTDPDDEKLSDACTEAYNKTLKPHHGW 121

Query: 145 AIRKAVAAGMYALPTRAQLLRKLNED 170
            +RKA    M ALP+R   L KL  D
Sbjct: 122 LVRKAFKLAMKALPSRKDFLEKLGGD 147

GLTP is a cytosolic protein that catalyzes the intermembrane transfer of glycolipids. Length = 148

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	218
PF08718	149	GLTP: Glycolipid transfer protein (GLTP); InterPro	100.0
KOG3221	199	consensus Glycolipid transfer protein [Carbohydrat	100.0
KOG4189	209	consensus Uncharacterized conserved protein [Funct	100.0

>PF08718 GLTP: Glycolipid transfer protein (GLTP); InterPro: IPR014830 Glycolipid transfer protein (GLTP) is a cytosolic protein that catalyses the intermembrane transfer of glycolipids such as glycosphingolipids, glyceroglycolipids, and possibly glucosylceramides, but not of phospholipids

Probab=100.00  E-value=1.6e-48  Score=318.24  Aligned_cols=143  Identities=32%  Similarity=0.623  Sum_probs=130.7

Q ss_pred             CCcchHHHHHHHhHHHHHHHhhchhhHHHHHHHHHhHHHHHH-----cccccccHHHHHHHHHhcCccccCCcchhhHHH
Q 027852           29 ADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAE-----ASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLR  103 (218)
Q Consensus        29 ~~I~t~~fL~a~~~l~~~~d~LG~vFs~v~~Dv~~kI~~l~~-----~~~~~~TL~~mv~~E~~~g~~~~~~S~tr~LLw  103 (218)
                      ++|+|.+||+||++|++|||.||++|+||++||.+||++|++     +|++|.||++||++|++.|+.++++||+++|||
T Consensus         1 n~i~~~~fl~a~~~l~~~~~~lG~~f~~v~~Dv~~ni~~l~~~~~~~~~~~~~tl~~~v~~E~~~~~~~~~~s~s~~LLw   80 (149)
T PF08718_consen    1 NDIDTEPFLEACRELVKFFDKLGTVFSFVKSDVQGNIKKLRKAYQEEDPEKYKTLESMVDYEVENGTHKKKGSGSRTLLW   80 (149)
T ss_dssp             SEEBHHHHHHHHTTSHHHHCCSSGGGHHHHHHHHHHHHHHHHHH-HHSTTTTSBHHHHHHHHHHHHGGGTSSHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCChhhhccHHHHHHHHHHHhcccccccHHHHHHH
Confidence            479999999999999999999999999999999999999875     367899999999999999998888899999999


Q ss_pred             HHhhHHHHHHHHHHHHhcCCC-ChhHHHHHHHHhhhccccchHHHHHHHHHhhhCCCHHHHHHHHccCC
Q 027852          104 VKRGLDMVRVLFEQILAAEGN-SLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDG  171 (218)
Q Consensus       104 L~RaL~Fi~~fl~~l~~~~~~-~ls~~a~~AY~~tL~~yH~W~vR~a~~lA~~alP~R~~fl~~l~~~~  171 (218)
                      |||||+|++.||+++.+++++ +++++|++||++||+|||||+||++|++||+++|+|++|++++++++
T Consensus        81 L~RaL~Fi~~~l~~l~~~~~~~~~~~~~~~AY~~tL~~yH~w~vr~~~~~a~~~~P~R~~fl~~l~~~~  149 (149)
T PF08718_consen   81 LHRALEFIVAFLENLLESPDDEKLSDAAREAYDKTLAPYHGWIVRKAFKLALKALPSRSDFLKKLGGNN  149 (149)
T ss_dssp             HHHHHHHHHHHHHHHHTS--BTBHHHHHHHHHHHHTGGGB-HHHHHHHHHHHHT--BHHHHHHHHTTT-
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHhCCC
Confidence            999999999999999998665 49999999999999999999999999999999999999999998763

The GLTP protein consists of a single domain with a multi-helical structure consisting of two layers of orthogonally packed helices [, ]. The GLTP domain is also found in trans-Golgi network proteins involved in Golgi-to-cell-surface membrane traffic [].; GO: 0017089 glycolipid transporter activity, 0051861 glycolipid binding, 0046836 glycolipid transport, 0005737 cytoplasm; PDB: 2BV7_A 1TFJ_A 1WBE_A 3KV0_A 3RWV_B 2EVD_A 2EUK_A 3RZN_A 2EVL_A 3S0K_A ....

>KOG3221 consensus Glycolipid transfer protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.4e-47  Score=319.13  Aligned_cols=181  Identities=18%  Similarity=0.314  Sum_probs=172.2

Q ss_pred             ccCCCCcchHHHHHHHhHHHHHHHhhchhhHHHHHHHHHhHHHHHH----cccccccHHHHHHHHHhcCccccCCcchhh
Q 027852           25 NSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAE----ASKSILTLQSVIDRDIEGNCVRKAGSHTRN  100 (218)
Q Consensus        25 ~~~~~~I~t~~fL~a~~~l~~~~d~LG~vFs~v~~Dv~~kI~~l~~----~~~~~~TL~~mv~~E~~~g~~~~~~S~tr~  100 (218)
                      .+++++|+|.+||+||.+|+||+|+||++|+||++||+|||+++.+    ++++++|||.+|..|++..... ++|||++
T Consensus        12 l~~d~~i~T~~FL~ac~~i~pvid~lG~~ftpVk~Di~gNI~kv~~~y~~d~~k~~~Lq~~i~~eie~~~a~-~~sat~a   90 (199)
T KOG3221|consen   12 LPDDGKIETGPFLEACKHIVPVIDKLGAVFTPVKSDISGNITKVKKVYDTDKEKFKYLQKIVKVEIETDIAE-KVSATLA   90 (199)
T ss_pred             CCcccCCccHHHHHHHhhhhhHHHHhhhhhHhHHHHhhccHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcc-cchhhHH
Confidence            5789999999999999999999999999999999999999999875    4889999999999999998877 8899999


Q ss_pred             HHHHHhhHHHHHHHHHHHHhcCCCChhHHHHHHHHhhhccccchHHHHHHHHHhhhCCCHHHHHHHHccCCCCchhhHHH
Q 027852          101 LLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLF  180 (218)
Q Consensus       101 LLwL~RaL~Fi~~fl~~l~~~~~~~ls~~a~~AY~~tL~~yH~W~vR~a~~lA~~alP~R~~fl~~l~~~~~~~~~~~~~  180 (218)
                      ||||+|||+|+..||++|.++.+..+.+++.+||++||+|||||++|++|++|++++|+|++|++.++-+ +...+.|++
T Consensus        91 LLWLkRgldF~~~~l~~l~~~~~~~l~~av~daY~kTLK~~HGwI~q~~FkvaLklvP~r~~Fl~als~~-d~t~~~~~e  169 (199)
T KOG3221|consen   91 LLWLKRGLDFTLAFLQELVNGESDCLIQAVADAYEKTLKKYHGWIVQSTFKVALKLVPDRKTFLKALSAG-DETYDECIE  169 (199)
T ss_pred             HHHHHhHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCcHHHHHHHHhcc-cchHHHHHH
Confidence            9999999999999999999988777999999999999999999999999999999999999999999877 677889999


Q ss_pred             HhhhhhhhcchhhhHHHHHHHHHHhhhhh
Q 027852          181 LLSNMILTFTFRFNFSFLLNNYILKKFHI  209 (218)
Q Consensus       181 ~l~~~~~~~~~~~~~~~~~~~y~~~~~~~  209 (218)
                      .|+.  ++.+|+-+++.+..+|..+++..
T Consensus       170 di~~--fl~~~~~~L~~i~~~l~~~~ld~  196 (199)
T KOG3221|consen  170 DITS--FLSLLTPILKEIYFVLEQYGLDD  196 (199)
T ss_pred             HHHH--HHHHHHhhHHHHHHHHHHhcccc
Confidence            9999  99999999999999999998864

>KOG4189 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.1e-42  Score=291.49  Aligned_cols=202  Identities=39%  Similarity=0.545  Sum_probs=175.5

Q ss_pred             CCCCCCCchHHHHHHHHHHHhhhccCCCCcchHHHHHHHhHHHHHHHhhchhhHHHHHHHHHhHHHHHHc-ccccccHHH
Q 027852            2 AGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEA-SKSILTLQS   80 (218)
Q Consensus         2 ~~~~~~~~l~~~~~~F~~~~~~v~~~~~~I~t~~fL~a~~~l~~~~d~LG~vFs~v~~Dv~~kI~~l~~~-~~~~~TL~~   80 (218)
                      .+.+...++.++...|+-+..++.+++++|++.+|+.||+++++||++||++|+||.+|+.+||+.|.+. ++...|+..
T Consensus         2 ~~~~~~~~~~~i~~~~~~i~~~v~~e~~eV~L~~f~~a~e~v~~~f~~lG~iF~Fve~Dv~aKid~L~~l~ssd~et~rt   81 (209)
T KOG4189|consen    2 FCMEQLGPLPKILQAFKTIEKSVIEEDNEVDLDQFLLAYEEVCKFFGCLGTIFSFVEKDVRAKIDDLVELRSSDPETYRT   81 (209)
T ss_pred             cchhhccchHHHHHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHH
Confidence            4566778899999999999988888989999999999999999999999999999999999999999875 445778888


Q ss_pred             HHHHHHhcCccccCC--cchhhHHHHHhhHHHHHHHHHHHHhcC-CCChhHHHHHHHHhhhccccchHHHHHHHHHhhhC
Q 027852           81 VIDRDIEGNCVRKAG--SHTRNLLRVKRGLDMVRVLFEQILAAE-GNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYAL  157 (218)
Q Consensus        81 mv~~E~~~g~~~~~~--S~tr~LLwL~RaL~Fi~~fl~~l~~~~-~~~ls~~a~~AY~~tL~~yH~W~vR~a~~lA~~al  157 (218)
                      |++.+.++...++.|  ||+|+||+|+|||+|+..||.++.+++ +++++++|++||++||+|||||+||+|+++||+++
T Consensus        82 ild~~~e~~~~~~~G~~Sgtr~Llrl~R~LefV~efl~~i~as~nD~s~~diakesYd~~lakhHsW~IRtAV~~amYtL  161 (209)
T KOG4189|consen   82 ILDLDTEESEVGTIGNQSGTRNLLRLNRALEFVIEFLDQIFASTNDESLKDIAKESYDKTLAKHHSWAIRTAVAAAMYTL  161 (209)
T ss_pred             HHHHHHHHhHhcccCccccchHHHHHHhhHHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhhccccHHHHHHHHHHHHhC
Confidence            888888887776677  999999999999999999999999885 68999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHccCCCCchhhHHHHhhhhhhhcchhhhHHHHHHHHHHhhhhh
Q 027852          158 PTRAQLLRKLNEDGESYPMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHI  209 (218)
Q Consensus       158 P~R~~fl~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~  209 (218)
                      |+|.+|+..++++.+.+. ++..   -  .+..=|-.+--+.++|+.+.+|.
T Consensus       162 PTR~~lL~~Lk~d~~~~~-~~~~---~--~~~~~r~ii~~~~~l~~~~~l~~  207 (209)
T KOG4189|consen  162 PTRPELLCRLKEDMDAAN-QNMQ---S--YNRDSRPIIRRVDKLYELFELTD  207 (209)
T ss_pred             CCcHHHHHHHHhHHHHHH-HHHH---H--HHHccChHHHHHhHHHHHhcccc
Confidence            999999999998875544 2212   1  33444556777778888888775

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	218
1wbe_A	209	X-Ray Structure Of Bovine Gltp Length = 209		3e-10
2bv7_A	208	Crystal Structure Of Gltp With Bound Gm3 Length = 2		3e-10
2evt_A	209	Crystal Structure Of D48v Mutant Of Human Glycolipi		3e-10
1swx_A	209	Crystal Structure Of A Human Glycolipid Transfer Pr		3e-10
1tfj_A	219	Crystal Structure Of Bovine Glycolipid Transfer Pro		3e-10
3ric_A	209	Crystal Structure Of D48v||a47d Mutant Of Human Gly		4e-10
2i3f_A	224	Crystal Structure Of A Glycolipid Transfer-Like Pro		5e-04

>pdb|1WBE|A Chain A, X-Ray Structure Of Bovine Gltp Length = 209

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 30  DVELAAFSRACSYVSPLFGCLG-IAFKFAEMDY---VAKVDDLAEASKSIL-TLQSV--I 82
            +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  +
Sbjct: 17  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFRTLQNILEV 76
Query: 83  DRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE-----GNSLKDPASKAYTQV 137
           ++++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY   
Sbjct: 77  EKEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMA 135
Query: 138 FAPHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
              +HGW ++K   A +YA P ++  L+ L++
Sbjct: 136 LKKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

>pdb|2BV7|A Chain A, Crystal Structure Of Gltp With Bound Gm3 Length = 208

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 30  DVELAAFSRACSYVSPLFGCLG-IAFKFAEMDY---VAKVDDLAEASKSIL-TLQSV--I 82
            +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  +
Sbjct: 16  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFRTLQNILEV 75
Query: 83  DRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE-----GNSLKDPASKAYTQV 137
           ++++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY   
Sbjct: 76  EKEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMA 134
Query: 138 FAPHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
              +HGW ++K   A +YA P ++  L+ L++
Sbjct: 135 LKKYHGWIVQKIFQAALYAAPYKSDFLKALSK 166

>pdb|2EVT|A Chain A, Crystal Structure Of D48v Mutant Of Human Glycolipid Transfer Protein Length = 209

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 30  DVELAAFSRACSYVSPLFGCLG----IAFKFAEMDYVAKVDDLAEASKSIL-TLQSV--I 82
            +E   F  A S++ P F CLG       K      + K+  + + + +   TLQ++  +
Sbjct: 17  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKAVISGNITKIKAVYDTNPAKFRTLQNILEV 76
Query: 83  DRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE-----GNSLKDPASKAYTQV 137
           ++++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY   
Sbjct: 77  EKEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMA 135
Query: 138 FAPHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
              +HGW ++K   A +YA P ++  L+ L++
Sbjct: 136 LKKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

>pdb|1SWX|A Chain A, Crystal Structure Of A Human Glycolipid Transfer Protein In Apo-Form Length = 209

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 30  DVELAAFSRACSYVSPLFGCLG-IAFKFAEMDY---VAKVDDLAEASKSIL-TLQSV--I 82
            +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  +
Sbjct: 17  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEV 76
Query: 83  DRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE-----GNSLKDPASKAYTQV 137
           ++++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY   
Sbjct: 77  EKEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMA 135
Query: 138 FAPHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
              +HGW ++K   A +YA P ++  L+ L++
Sbjct: 136 LKKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

>pdb|1TFJ|A Chain A, Crystal Structure Of Bovine Glycolipid Transfer Protein In Complex With A Fatty Acid Length = 219

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 30  DVELAAFSRACSYVSPLFGCLG-IAFKFAEMDY---VAKVDDLAEASKSIL-TLQSV--I 82
            +E   F  A S++ P F CLG   F   + D    + K+  + + + +   TLQ++  +
Sbjct: 27  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFRTLQNILEV 86
Query: 83  DRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE-----GNSLKDPASKAYTQV 137
           ++++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY   
Sbjct: 87  EKEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMA 145
Query: 138 FAPHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
              +HGW ++K   A +YA P ++  L+ L++
Sbjct: 146 LKKYHGWIVQKIFQAALYAAPYKSDFLKALSK 177

>pdb|3RIC|A Chain A, Crystal Structure Of D48v||a47d Mutant Of Human Glycolipid Transfer Protein Complexed With 3-O-Sulfo-Galactosylceramide Containing Nervonoyl Acyl Chain (24:1) Length = 209

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 30  DVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVA----KVDDLAEASKSIL-TLQSV--I 82
            +E   F  A S++ P F CLG        D ++    K+  + + + +   TLQ++  +
Sbjct: 17  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKDVISGNITKIKAVYDTNPAKFRTLQNILEV 76
Query: 83  DRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE-----GNSLKDPASKAYTQV 137
           ++++ G    K G+ T  L+ +KRGL  ++V  + I   E      N ++  A+KAY   
Sbjct: 77  EKEMYGAEWPKVGA-TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMA 135
Query: 138 FAPHHGWAIRKAVAAGMYALPTRAQLLRKLNE 169
              +HGW ++K   A +YA P ++  L+ L++
Sbjct: 136 LKKYHGWIVQKIFQAALYAAPYKSDFLKALSK 167

>pdb|2I3F|A Chain A, Crystal Structure Of A Glycolipid Transfer-Like Protein From Galdieria Sulphuraria Length = 224

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 31  VELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSIL--TLQSVIDRDIEG 88
           V L  F  A   V  +    G  F+  + D    +  L  A++++   TLQ +I   I  
Sbjct: 30  VPLEPFLTAAKEVLRVVDAFGSGFRIVKNDIAGNIKKLYRANQTVHAETLQELI---IAE 86
Query: 89  NCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRK 148
           N     G  T  LL +KR    +     +++  +  SL+   ++AY     P H   I+K
Sbjct: 87  N--SPDGLATVALLWLKRAFQFIASFLRRLVVTD-KSLEQCVTEAYNCTLRPCHSAVIQK 143
Query: 149 AVAAGMYALPTRAQLLRKLNED 170
               G+   P+R +  RKL+ D
Sbjct: 144 VFWGGVKLAPSRERFYRKLHPD 165

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	218
2i3f_A	224	Glycolipid transfer-like protein; GLTP superfamily	2e-41
3kv0_A	209	HET-C2; GLTP, glycolipid transfer protein, transpo	4e-35
3rzn_A	209	GLTP, glycolipid transfer protein; GLTP-fold, lipi	6e-35

>2i3f_A Glycolipid transfer-like protein; GLTP superfamily, GLTP-like, protein structure initiative, PSI; 1.38A {Galdieria sulphuraria} PDB: 2q52_A Length = 224

 Score =  139 bits (351), Expect = 2e-41
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 11/171 (6%)

Query: 5   DNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAK 64
           +  +    I   +K++    +     V L  F  A   V  +    G  F+  + D    
Sbjct: 7   EEKEDFGIIVILWKQVTVKED---GKVPLEPFLTAAKEVLRVVDAFGSGFRIVKNDIAGN 63

Query: 65  VDDLAEASKSI--LTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE 122
           +  L  A++++   TLQ +I  +         G  T  LL +KR    +     +++  +
Sbjct: 64  IKKLYRANQTVHAETLQELIIAENS-----PDGLATVALLWLKRAFQFIASFLRRLVVTD 118

Query: 123 GNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGES 173
             SL+   ++AY     P H   I+K    G+   P+R +  RKL+ D   
Sbjct: 119 -KSLEQCVTEAYNCTLRPCHSAVIQKVFWGGVKLAPSRERFYRKLHPDLNI 168

>3kv0_A HET-C2; GLTP, glycolipid transfer protein, transport protein; HET: MLY; 1.90A {Podospora anserina} Length = 209

 Score =  122 bits (307), Expect = 4e-35
 Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 3/164 (1%)

Query: 10  LTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLG-IAFKFAEMDYVAKVDDL 68
           L     SF ++          +  A F  A   ++ +F  LG IAF     D +  V+ +
Sbjct: 17  LETFXXSFVDVPID-AEXGNAISTAEFLEAAESLTTMFDVLGSIAFSPVXTDMLGNVEXI 75

Query: 69  AEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKD 128
                +       I   +       + + T  LL + RGL+   +     + +    L D
Sbjct: 76  RXRMLAAPLESQNIQDLVRNELXTXSHTATEGLLWLVRGLEFTCIALSXNIGST-EELAD 134

Query: 129 PASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGE 172
               +Y     PHH + +    +A M A P R      L +D +
Sbjct: 135 SFRGSYRVTLXPHHSFLVXPIFSAAMSACPYRXDFYAXLGDDEQ 178

>3rzn_A GLTP, glycolipid transfer protein; GLTP-fold, lipid transport; HET: CIS; 1.10A {Homo sapiens} PDB: 1sx6_A* 2euk_A* 2eum_A* 2evd_A* 2evl_A* 2evs_A* 1swx_A 3rwv_A* 3s0k_A* 3s0i_A* 2evt_A* 1wbe_A* 3ric_A* 1tfj_A* 2bv7_A* Length = 209

 Score =  122 bits (306), Expect = 6e-35
 Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 12/173 (6%)

Query: 13  ISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLG-IAFKFAEMDYVAKVDDLAEA 71
           ++   + L   + +    +E   F  A S++ P F CLG   F   + D    +  +   
Sbjct: 1   MALLAEHLLKPLPA-DKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAV 59

Query: 72  SKS----ILTLQSVIDRDIEGNCVRKAG-SHTRNLLRVKRGLDMVRVLFEQILAAE---- 122
             +      TLQ++++ + E           T  L+ +KRGL  ++V  + I   E    
Sbjct: 60  YDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDEN 119

Query: 123 -GNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESY 174
             N ++  A+KAY      +HGW ++K   A +YA P ++  L+ L++     
Sbjct: 120 HPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVT 172

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	218
d1swxa_	202	a.224.1.1 (A:) Glycolipid transfer protein, GLTP {	4e-39

>d1swxa_ a.224.1.1 (A:) Glycolipid transfer protein, GLTP {Human (Homo sapiens) [TaxId: 9606]} Length = 202

class: All alpha proteins
fold: Glycolipid transfer protein, GLTP
superfamily: Glycolipid transfer protein, GLTP
family: Glycolipid transfer protein, GLTP
domain: Glycolipid transfer protein, GLTP
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (332), Expect = 4e-39
 Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 11/156 (7%)

Query: 30  DVELAAFSRACSYVSPLFGCLG-IAFKFAEMDYVAKVDDLAEASKS----ILTLQSVIDR 84
            +E   F  A S++ P F CLG   F   + D    +  +     +      TLQ++++ 
Sbjct: 10  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEV 69

Query: 85  DIEGNCVRKAGSH-TRNLLRVKRGLDMVRVLFEQILAAEG-----NSLKDPASKAYTQVF 138
           + E           T  L+ +KRGL  ++V  + I   E      N ++  A+KAY    
Sbjct: 70  EKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMAL 129

Query: 139 APHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESY 174
             +HGW ++K   A +YA P ++  L+ L++     
Sbjct: 130 KKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVT 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	218
d1swxa_	202	Glycolipid transfer protein, GLTP {Human (Homo sap	100.0

>d1swxa_ a.224.1.1 (A:) Glycolipid transfer protein, GLTP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Glycolipid transfer protein, GLTP
superfamily: Glycolipid transfer protein, GLTP
family: Glycolipid transfer protein, GLTP
domain: Glycolipid transfer protein, GLTP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=322.21  Aligned_cols=185  Identities=22%  Similarity=0.394  Sum_probs=169.1

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHH----CCCCCCCHHHHHHHHHHCCCCCC-CCCCHH
Q ss_conf             68998663889999958977897430-3468979879982999997----42124109999999873376456-886205
Q 027852           26 SQAADVELAAFSRACSYVSPLFGCLG-IAFKFAEMDYVAKVDDLAE----ASKSILTLQSVIDRDIEGNCVRK-AGSHTR   99 (218)
Q Consensus        26 ~~~~~I~t~~FL~a~~~l~~~~d~LG-~vFs~vk~Di~~kI~~l~~----~~~~~~TL~~li~~E~~~g~~~~-~~S~t~   99 (218)
                      .++++|+|.+||+||+++++||+.|| ++|+||++||.+||+++++    +|++|.||++||++|++.+..++ .+||++
T Consensus         6 ~~d~~i~t~~fL~a~~~i~~~~~~lG~~~F~~v~~Dv~gnI~kl~~~~~~~~~~~~tL~~mv~~E~~~~~~k~~~~s~t~   85 (202)
T d1swxa_           6 PADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATL   85 (202)
T ss_dssp             CTTCCCBHHHHHHHHTTSGGGGGTTSSCSSHHHHHHHHHHHHHHHHHHHHCTTTTSBHHHHHHHHHHHHGGGTTSSHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf             98887448999999999999999826179999999999799999999875827766799999999872446678871589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
Q ss_conf             689997468999999999985289-----880079999998620226506789999997530899789999970389973
Q 027852          100 NLLRVKRGLDMVRVLFEQILAAEG-----NSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESY  174 (218)
Q Consensus       100 ~LLwL~RaL~Fi~~fl~~l~~~~~-----~~l~~~~~~AY~~tL~~yHgw~vr~a~~~Al~a~P~R~~fl~~l~~~~~~~  174 (218)
                      +||||+|||+|++.||+++.++++     .+++.+|++||++||+|||||+||++|++||+++|+|++|+++++.+++..
T Consensus        86 ~LLwL~RaL~Fi~~fl~~l~~~~~~~~~~~~l~~~~~~AY~~tL~~yH~w~vr~~~~~A~~~~P~R~~fl~~l~~~~~~~  165 (202)
T d1swxa_          86 ALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVT  165 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCTTSTTCCHHHHHHHHHHHTGGGCCHHHHHHHHHHHHTCCCHHHHHHHHTC----C
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHH
T ss_conf             99999999999999999987074644320678999999999998844609999999999981797999999983698424


Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             35589875533330010135789999999755555431
Q 027852          175 PMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHIFFR  212 (218)
Q Consensus       175 ~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~  212 (218)
                      ++..+..+..  +++.++..+..+.++|..++||...+
T Consensus       166 ~~~~~~~l~~--~~~~~~~~~~~i~~ly~~~~L~~~~k  201 (202)
T d1swxa_         166 EEECLEKIRL--FLVNYTATIDVIYEMYTQMNAELNYK  201 (202)
T ss_dssp             HHHHHHHHHH--HHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             8999999999--99999999999999999869997787