Citrus Sinensis ID: 027899


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------
MLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREPELNNEKETTEQETTEHENRRRLLEAVAASGGSIRRALAAGSTTEKCSKGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAKMKKWKKWEKETRTIDYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQFVRSVPKVDYLTLRHGFVTVIFLCFQSLAISIKYY
cHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccHHHHHccccccccEEHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccccc
ccHHHHHHHHHHcccHHHHEEccHHHHHccccccccccHHHccccccccccccccccccEEEEcccccccccHHHHcccccccccccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccccc
MLLGFISLLLTVAGSwiskicipesvantwhpcdkerepelnneketteqeTTEHENRRRLLEAVAASGGSIRRALAagsttekcskgkvpfvsedglhqLHIFIFVLALFHVLYSILTMALSRAKMKKWKKWEKETRTIdyqfshdperfrFAREtsfgrrhlsswtktpVLIWIVCFFRQfvrsvpkvdyltlRHGFVTVIFLCFQSLAISIKYY
MLLGFISLLLTVAGSWISKICIPEsvantwhpcdkerepelnneketteqettehenrRRLLEAVAASGGSIRRAlaagsttekcskGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAKMKKWKKWEKETRtidyqfshdperfRFARETsfgrrhlsswtktpvLIWIVCFFRQFVRSVPKVDYLTLRHGFVTVIFLCFQSLAISIKYY
MLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREPelnneketteqettehenRRRLLEAVAASGGSIRRALAAGSTTEKCSKGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAkmkkwkkwekeTRTIDYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQFVRSVPKVDYLTLRHGFVTVIFLCFQSLAISIKYY
*LLGFISLLLTVAGSWISKICIPESVANTWHPC******************************************************GKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAKMKKWKKWEKETRTIDYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQFVRSVPKVDYLTLRHGFVTVIFLCFQSLAISIKY*
MLLGFISLLLTVAGSWISKICIPESVANTWHPC**************************RLLEAVAASGGSIRRALAAGSTTEKCSKGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAKMKKWKKWEKET***************FARETSFGRRHLSSWTKTPVLIWIVCFFRQFVRSVPKVDYLTLRHGFVTVIFLCFQSL****KYY
MLLGFISLLLTVAGSWISKICIPESVANTWHPCDKE*********************RRRLLEAVAASGGSIRRAL**********KGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSR*********EKETRTIDYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQFVRSVPKVDYLTLRHGFVTVIFLCFQSLAISIKYY
MLLGFISLLLTVAGSWISKICIPESVANTWHPCDKE********************NRRRLLEAVAASGGSIRRALAAGSTTEKCSKGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAKMKKWKKWEKETRTIDYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQFVRSVPKVDYLTLRHGFVTVIFLCFQSLAISI***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiii
SSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREPELNNEKETTEQETTEHENRRRLLEAVAASGGSIRRALAAGSTTEKCSKGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAKMKKWKKWEKETRTIDYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQFVRSVPKVDYLTLRHGFVTVIFLCFQSLAISIKYY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query217 2.2.26 [Sep-21-2011]
Q94KB7 583 MLO-like protein 6 OS=Ara yes no 0.903 0.336 0.587 1e-63
O80961 576 MLO-like protein 12 OS=Ar no no 0.884 0.333 0.562 8e-60
Q9SXB6 573 MLO-like protein 2 OS=Ara no no 0.935 0.354 0.556 1e-56
A2YD22 540 MLO protein homolog 1 OS= N/A no 0.815 0.327 0.544 1e-52
Q0DC45 540 MLO protein homolog 1 OS= no no 0.811 0.325 0.527 9e-52
Q9FKY5 569 MLO-like protein 10 OS=Ar no no 0.797 0.304 0.47 5e-46
O22757 593 MLO-like protein 8 OS=Ara no no 0.852 0.311 0.497 9e-46
O22752 542 MLO-like protein 7 OS=Ara no no 0.824 0.330 0.467 4e-45
O49873 544 MLO protein homolog 1 OS= N/A no 0.870 0.347 0.485 2e-44
O22815 501 MLO-like protein 5 OS=Ara no no 0.834 0.361 0.435 1e-42
>sp|Q94KB7|MLO6_ARATH MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6 PE=2 SV=2 Back     alignment and function desciption
 Score =  243 bits (619), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 152/201 (75%), Gaps = 5/201 (2%)

Query: 1   MLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREPELNNEKETTEQETTEHEN-RR 59
           ML+GFISLLLT+   +IS ICIP+++A + HPC    E     +K+  +++  E EN RR
Sbjct: 63  MLMGFISLLLTIGQGYISNICIPKNIAASMHPCSASEEARKYGKKDVPKED--EEENLRR 120

Query: 60  RLLEAVAASGGSIRRALAAGSTTEKCSKGKVPFVSEDGLHQLHIFIFVLALFHVLYSILT 119
           +LL+ V +     RR+LA     +   KGKV FVS  G+HQLHIFIFVLA+ HV+Y I+T
Sbjct: 121 KLLQLVDSLIP--RRSLATKGYDKCAEKGKVAFVSAYGMHQLHIFIFVLAVCHVIYCIVT 178

Query: 120 MALSRAKMKKWKKWEKETRTIDYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCF 179
            AL + KM++WKKWE+ET+TI+YQ+SHDPERFRFAR+TSFGRRHLS W+K+ + +WIVCF
Sbjct: 179 YALGKTKMRRWKKWEEETKTIEYQYSHDPERFRFARDTSFGRRHLSFWSKSTITLWIVCF 238

Query: 180 FRQFVRSVPKVDYLTLRHGFV 200
           FRQF RSV KVDYLTLRHGF+
Sbjct: 239 FRQFFRSVTKVDYLTLRHGFI 259




May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins.
Arabidopsis thaliana (taxid: 3702)
>sp|O80961|MLO12_ARATH MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO12 PE=2 SV=2 Back     alignment and function description
>sp|Q9SXB6|MLO2_ARATH MLO-like protein 2 OS=Arabidopsis thaliana GN=MLO2 PE=1 SV=1 Back     alignment and function description
>sp|A2YD22|MLOH1_ORYSI MLO protein homolog 1 OS=Oryza sativa subsp. indica GN=MLO1 PE=3 SV=2 Back     alignment and function description
>sp|Q0DC45|MLOH1_ORYSJ MLO protein homolog 1 OS=Oryza sativa subsp. japonica GN=MLO1 PE=3 SV=2 Back     alignment and function description
>sp|Q9FKY5|MLO10_ARATH MLO-like protein 10 OS=Arabidopsis thaliana GN=MLO10 PE=2 SV=1 Back     alignment and function description
>sp|O22757|MLO8_ARATH MLO-like protein 8 OS=Arabidopsis thaliana GN=MLO8 PE=2 SV=2 Back     alignment and function description
>sp|O22752|MLO7_ARATH MLO-like protein 7 OS=Arabidopsis thaliana GN=MLO7 PE=2 SV=3 Back     alignment and function description
>sp|O49873|MLOH1_HORVU MLO protein homolog 1 OS=Hordeum vulgare GN=MLO-H1 PE=3 SV=1 Back     alignment and function description
>sp|O22815|MLO5_ARATH MLO-like protein 5 OS=Arabidopsis thaliana GN=MLO5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query217
224106758 620 predicted protein [Populus trichocarpa] 0.907 0.317 0.736 6e-82
255570839 594 Protein MLO, putative [Ricinus communis] 0.903 0.329 0.75 1e-78
449463647 415 PREDICTED: MLO-like protein 6-like [Cucu 0.912 0.477 0.689 4e-77
356539124 576 PREDICTED: MLO-like protein 6-like [Glyc 0.907 0.342 0.705 9e-77
449508693 593 PREDICTED: MLO-like protein 6-like [Cucu 0.903 0.330 0.686 7e-76
356544617 577 PREDICTED: MLO-like protein 6-like [Glyc 0.894 0.336 0.685 4e-75
414146301 592 MLO protein 1 [Rosa multiflora] 0.894 0.327 0.693 3e-73
449462111 582 PREDICTED: MLO-like protein 6-like [Cucu 0.907 0.338 0.676 7e-72
60617257 587 MLO1 [Capsicum annuum] 0.884 0.327 0.67 2e-71
297746234 699 unnamed protein product [Vitis vinifera] 0.898 0.278 0.69 6e-71
>gi|224106758|ref|XP_002314276.1| predicted protein [Populus trichocarpa] gi|222850684|gb|EEE88231.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  309 bits (791), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 148/201 (73%), Positives = 168/201 (83%), Gaps = 4/201 (1%)

Query: 1   MLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREPELNNEKETTEQETTEHENRRR 60
           MLLGFISLLLTV  S IS ICI +    TWHPC+K+ E +LN  +   E   T++ENRR+
Sbjct: 63  MLLGFISLLLTVGQSPISNICISKKAGATWHPCNKKEEAKLNGTENIKE---TDYENRRK 119

Query: 61  LLEAVAASGGSIRRALAAGSTTEKCS-KGKVPFVSEDGLHQLHIFIFVLALFHVLYSILT 119
           LL    ++G S+RR LAAG +T+KC+ KGKVPFVS DG+HQLHIFIFVLA+FH+LY ILT
Sbjct: 120 LLSISDSAGESLRRVLAAGESTDKCAAKGKVPFVSSDGIHQLHIFIFVLAIFHILYCILT 179

Query: 120 MALSRAKMKKWKKWEKETRTIDYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCF 179
           MAL RAKMK WK+WEKETRT +YQFSHDPERFRFARETSFGRRHLS WTKTPVLIWIVCF
Sbjct: 180 MALGRAKMKSWKRWEKETRTAEYQFSHDPERFRFARETSFGRRHLSFWTKTPVLIWIVCF 239

Query: 180 FRQFVRSVPKVDYLTLRHGFV 200
           FRQFVRSVPKVDYLTLRHGF+
Sbjct: 240 FRQFVRSVPKVDYLTLRHGFI 260




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570839|ref|XP_002526372.1| Protein MLO, putative [Ricinus communis] gi|223534331|gb|EEF36043.1| Protein MLO, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449463647|ref|XP_004149543.1| PREDICTED: MLO-like protein 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356539124|ref|XP_003538050.1| PREDICTED: MLO-like protein 6-like [Glycine max] Back     alignment and taxonomy information
>gi|449508693|ref|XP_004163384.1| PREDICTED: MLO-like protein 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356544617|ref|XP_003540745.1| PREDICTED: MLO-like protein 6-like [Glycine max] Back     alignment and taxonomy information
>gi|414146301|gb|AFW98801.1| MLO protein 1 [Rosa multiflora] Back     alignment and taxonomy information
>gi|449462111|ref|XP_004148785.1| PREDICTED: MLO-like protein 6-like [Cucumis sativus] gi|449522974|ref|XP_004168500.1| PREDICTED: MLO-like protein 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|60617257|gb|AAX31277.1| MLO1 [Capsicum annuum] Back     alignment and taxonomy information
>gi|297746234|emb|CBI16290.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query217
TAIR|locus:2200883 583 MLO6 "AT1G61560" [Arabidopsis 0.903 0.336 0.537 3.6e-50
TAIR|locus:2202064 573 MLO2 "AT1G11310" [Arabidopsis 0.926 0.350 0.526 1.2e-47
TAIR|locus:2056113 576 MLO12 "AT2G39200" [Arabidopsis 0.880 0.331 0.519 2.6e-47
TAIR|locus:2156837 569 MLO10 "AT5G65970" [Arabidopsis 0.589 0.224 0.5 2.6e-38
TAIR|locus:2827607 542 MLO7 "AT2G17430" [Arabidopsis 0.645 0.258 0.482 4.8e-38
TAIR|locus:2078292 508 MLO3 "AT3G45290" [Arabidopsis 0.539 0.230 0.516 4e-36
TAIR|locus:2053888 593 MLO8 "AT2G17480" [Arabidopsis 0.857 0.313 0.441 9.7e-34
TAIR|locus:2051073 501 MLO5 "AT2G33670" [Arabidopsis 0.589 0.255 0.476 4.1e-33
TAIR|locus:2036650 460 MLO9 "AT1G42560" [Arabidopsis 0.870 0.410 0.386 3e-30
TAIR|locus:2164037 573 MLO11 "AT5G53760" [Arabidopsis 0.870 0.329 0.394 4.5e-25
TAIR|locus:2200883 MLO6 "AT1G61560" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 108/201 (53%), Positives = 135/201 (67%)

Query:     1 MLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREPXXXXXXXXXXXXXXXXXXRRR 60
             ML+GFISLLLT+   +IS ICIP+++A + HPC    E                   RR+
Sbjct:    63 MLMGFISLLLTIGQGYISNICIPKNIAASMHPCSASEE-ARKYGKKDVPKEDEEENLRRK 121

Query:    61 LLEAVAASGGSIRRALAAGSTTEKCS-KGKVPFVSEDGLHQLHIFIFVLALFHVLYSILT 119
             LL+ V +     RR+LA     +KC+ KGKV FVS  G+HQLHIFIFVLA+ HV+Y I+T
Sbjct:   122 LLQLVDSL--IPRRSLATKGY-DKCAEKGKVAFVSAYGMHQLHIFIFVLAVCHVIYCIVT 178

Query:   120 MALSRAXXXXXXXXXXXTRTIDYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCF 179
              AL +            T+TI+YQ+SHDPERFRFAR+TSFGRRHLS W+K+ + +WIVCF
Sbjct:   179 YALGKTKMRRWKKWEEETKTIEYQYSHDPERFRFARDTSFGRRHLSFWSKSTITLWIVCF 238

Query:   180 FRQFVRSVPKVDYLTLRHGFV 200
             FRQF RSV KVDYLTLRHGF+
Sbjct:   239 FRQFFRSVTKVDYLTLRHGFI 259




GO:0005516 "calmodulin binding" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0005886 "plasma membrane" evidence=ISS;TAS
GO:0006952 "defense response" evidence=ISS
GO:0008219 "cell death" evidence=IEA;ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IMP
GO:0052542 "defense response by callose deposition" evidence=RCA
TAIR|locus:2202064 MLO2 "AT1G11310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056113 MLO12 "AT2G39200" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156837 MLO10 "AT5G65970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827607 MLO7 "AT2G17430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078292 MLO3 "AT3G45290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053888 MLO8 "AT2G17480" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2051073 MLO5 "AT2G33670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036650 MLO9 "AT1G42560" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164037 MLO11 "AT5G53760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00091521
hypothetical protein (620 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query217
pfam03094 481 pfam03094, Mlo, Mlo family 5e-86
>gnl|CDD|217363 pfam03094, Mlo, Mlo family Back     alignment and domain information
 Score =  262 bits (671), Expect = 5e-86
 Identities = 105/203 (51%), Positives = 128/203 (63%), Gaps = 22/203 (10%)

Query: 1   MLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREPELNNEKETTEQETTEHENRRR 60
           MLLGFISLLLTV  ++ISKIC+  +VA+T  PC    E     +K T           R 
Sbjct: 59  MLLGFISLLLTVGQTYISKICVSSNVASTMLPCSAGEEDSKPGKKHTG----------RH 108

Query: 61  LLEAVAASGGSIRRALAAGSTTEKCS-KGKVPFVSEDGLHQLHIFIFVLALFHVLYSILT 119
           LL    A                 C+ KGKVP VS + LHQLHIFIFVLA+FHVLYS +T
Sbjct: 109 LLAHGLAEASPD-----------YCAEKGKVPLVSLEALHQLHIFIFVLAVFHVLYSAIT 157

Query: 120 MALSRAKMKKWKKWEKETRTIDYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCF 179
           M L R K+++WKKWE ET++I+Y+FS+DP RFR   ETSF R HL+ W+K+  L W+ CF
Sbjct: 158 MMLGRLKIRQWKKWEDETKSIEYEFSNDPSRFRHTHETSFVREHLNGWSKSRFLFWVQCF 217

Query: 180 FRQFVRSVPKVDYLTLRHGFVTV 202
           FRQF  SV K DYLTLRHGF+  
Sbjct: 218 FRQFFGSVTKSDYLTLRHGFIMA 240


A family of plant integral membrane proteins, first discovered in barley. Mutants lacking wild-type Mlo proteins show broad spectrum resistance to the powdery mildew fungus, and dysregulated cell death control, with spontaneous cell death in response to developmental or abiotic stimuli. Thus wild-type Mlo proteins are thought to be inhibitors of cell death whose deficiency lowers the threshold required to trigger the cascade of events that result in plant cell death. Mlo proteins are localised in the plasma membrane and possess seven transmembrane regions; thus the Mlo family is the only major higher plant family to possess 7 transmembrane domains. It has been suggested that Mlo proteins function as G-protein coupled receptors in plants; however the molecular and biological functions of Mlo proteins remain to be fully determined. Length = 481

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 217
PF03094 478 Mlo: Mlo family; InterPro: IPR004326 The Mlo-relat 100.0
>PF03094 Mlo: Mlo family; InterPro: IPR004326 The Mlo-related proteins are a family of plant integral membrane proteins, first discovered in barley Back     alignment and domain information
Probab=100.00  E-value=9.7e-79  Score=574.94  Aligned_cols=187  Identities=60%  Similarity=1.004  Sum_probs=171.2

Q ss_pred             CchhHHHHHHHHhhhhccccccccCCCCccccCCCCCCcCccccccccchhhhhhhHHHHHHHHHHhcCcchhhhhcc--
Q 027899            1 MLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREPELNNEKETTEQETTEHENRRRLLEAVAASGGSIRRALAA--   78 (217)
Q Consensus         1 MLLGFISLLLTv~Q~~IskICIp~s~~~~mlPC~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~RRlLa~--   78 (217)
                      ||||||||||||+|++|+|||||++++++|+||+.+++..+.   ++                     ....||+|+.  
T Consensus        58 MlLGfiSLlLt~~q~~IskICIp~~~~~~~lPC~~~~~~~~~---~~---------------------~~~~r~ll~~~~  113 (478)
T PF03094_consen   58 MLLGFISLLLTVFQNPISKICIPSSYASTMLPCKPPEESSKE---GS---------------------SHNRRRLLASGA  113 (478)
T ss_pred             HHHHHHHHHHHHHHHhHhHeecChhHHhcccCCCCccccccc---cc---------------------chhhhhhhhhhc
Confidence            999999999999999999999999999999999865543321   00                     1136888873  


Q ss_pred             CCCcccCC-CCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhccccccCCCCceeeeeeec
Q 027899           79 GSTTEKCS-KGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAKMKKWKKWEKETRTIDYQFSHDPERFRFARET  157 (217)
Q Consensus        79 ~~~~~~C~-kGkvpliS~egLHQLHIFIFVLAv~HV~ys~lTm~Lg~~Kir~Wk~WE~e~~~~~~~~~~dp~r~r~~~qt  157 (217)
                      +.+.++|+ ||||||+|.|||||||||||||||+||+|||+||+||++|||+||+||+|+++++++..|||+|+|++||+
T Consensus       114 ~~~~~~C~~kGkvpliS~egLHQLHIFIFVLAV~HV~Ys~lTm~Lg~~KIr~Wk~WE~e~~~~~~~~~~d~~r~~~~~qt  193 (478)
T PF03094_consen  114 AEGSDYCPKKGKVPLISAEGLHQLHIFIFVLAVVHVLYSCLTMLLGRAKIRRWKKWEDEAQTDEYQFSNDPRRFRLTRQT  193 (478)
T ss_pred             ccccCcccccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcceeeeeccc
Confidence            34467897 69999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCcchHHHHHHHHHhhcCCCChhHHHHHHhhhhhhhhCCCCcee
Q 027899          158 SFGRRHLSSWTKTPVLIWIVCFFRQFVRSVPKVDYLTLRHGFVTVIFLCFQSLA  211 (217)
Q Consensus       158 tF~r~h~~~ws~~~~l~Wi~~FfrQF~~SV~k~DYltLR~GFI~~H~~~~~~~~  211 (217)
                      +|+|+|.++|++++++.|++|||||||+||+|+||+|||+|||++|++||+.|.
T Consensus       194 ~F~r~h~~~w~~~~~~~wi~~FfrQF~~SV~k~DYltLR~gFI~~H~~~~~~FD  247 (478)
T PF03094_consen  194 TFVRRHTSFWSKSPVLSWIVCFFRQFYGSVTKSDYLTLRHGFITAHLLPNPKFD  247 (478)
T ss_pred             HHHHhhcCCcccChhHHhHHHHHHHhhccccHHHHHHHHHHHHHhhcCCCCCCC
Confidence            999999999999999999999999999999999999999999999999988874



Mutants lacking wild-type Mlo proteins show broad spectrum resistance to the powdery mildew fungus, and dysregulated cell death control, with spontaneous cell death in response to developmental or abiotic stimuli. Thus wild-type Mlo proteins are thought to be inhibitors of cell death whose deficiency lowers the threshold required to trigger the cascade of events that result in plant cell death. Mlo proteins are localized in the plasma membrane and possess seven transmembrane regions; thus the Mlo family is the only major higher plant family to possess 7 transmembrane domains. It has been suggested that Mlo proteins function as G-protein coupled receptors in plants []; however the molecular and biological functions of Mlo proteins is still unclear.; GO: 0008219 cell death, 0016021 integral to membrane


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00