Citrus Sinensis ID: 027936

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
Protein Sequence
MGEQNEGDKKAAGAAADAGGKKDDGVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEEEEEEEccHHHHHHHHHHHHccccccEEEEEEccccEEEEEEEccHHHHHHHHHHHccccEEEEEcccccccccccccccccccHHHHHccccccccccccHHHHHHcccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccEEEEEEEEEccHHHHHHHHHHHHHccccEEEEEEccccEEEEEEEEcHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcc
Coil and Loop (DISEMBL)
mgeqnegdkKAAGaaadaggkkddGVVTVVLKIRLHCEGCISKIKKIIYKtkgvdnvtidggkdlvtvkgtmDVKELVPYLKEKLKRNvevvpakkddgekkenkdadkggdkkakeaapatdkggekkekeaaaagggdggkvEVHKMeyygypyppapsywydnhvygqsypmenqHQVVYanqgyppqmhhappmyhapqmfsdenpnacsvm
Flexible Loop (DISEMBL)
mgeqnegdkkaagaaadaggkkddGVVTVVLKIRLHCegciskikkiiyktkgvdnvtidggkdlvtvkgtmdVKELVpylkeklkrnvevvpakkddgekkenkdadkggdkkakeaapatdkggekkekeaaaagggdggkVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Low Complexity Region (SEG)
MGEQNEgdkkaagaaadaggkkddgVVTVVLKIRLHCEGCiskikkiiyktkGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPakkddgekkenkdadkggdkkakeaaPATdkggekkekeaaaagggdggkvevHKMEyygypyppapsywyDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Disordered region (IsUnstruct)
************************GVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR********************************************************VEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYAN*******************************
Disordered Region (DISOPRED)
****************************VVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP*************************************************KVEVHKMEYYGYPYP**********************************MHHAPPMYHAPQMFSDENPNACSVM
Disordered Region (DISEMBL)
*********************KDDGVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAK**********************************************GKVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Disordered Region (DISPRO)
***********************DGVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAK**************************************************VHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGEQNEGDKKAAGAAADAGGKKDDGVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	216	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.337	0.477	0.328	0.0005

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 43/73 (58%)

Query: 21 KKDDGVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPY 80
          KK   + TV +K+++ CEGC  K+++ +   KGV +VT++     VTV G +D  ++V  
Sbjct: 20 KKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVAR 79

Query: 81 LKEKLKRNVEVVP 93
          +  +  + VE+ P
Sbjct: 80 MSHRTGKKVELWP 92

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
356505250	329	PREDICTED: uncharacterized protein LOC10	0.768	0.504	0.470	3e-37
297823503	388	hypothetical protein ARALYDRAFT_482676 [	0.842	0.469	0.502	9e-37
356570770	335	PREDICTED: uncharacterized protein LOC10	0.805	0.519	0.506	1e-36
18404283	386	heavy-metal-associated domain-containing	0.851	0.476	0.497	1e-35
4097545	248	ATFP2, partial [Arabidopsis thaliana]	0.856	0.745	0.487	5e-35
356548272	331	PREDICTED: uncharacterized protein LOC54	0.842	0.549	0.521	3e-34
413968366	324	hypothetical protein [Phaseolus vulgaris	0.763	0.509	0.450	3e-34
4097571	217	GMFP5, partial [Glycine max]	0.842	0.838	0.521	6e-34
255556920	345	metal ion binding protein, putative [Ric	0.805	0.504	0.468	7e-34
225440067	345	PREDICTED: uncharacterized protein LOC10	0.879	0.550	0.495	9e-34

>gi|356505250|ref|XP_003521405.1| PREDICTED: uncharacterized protein LOC100792662 [Glycine max]

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/223 (47%), Positives = 122/223 (54%), Gaps = 57/223 (25%)

Query: 28  TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87
           TVVLKIRLHCEGCI KI+KII KTKGV++V I+GGKDLV+VKGTMDVKE+VPYL EKLKR
Sbjct: 130 TVVLKIRLHCEGCIQKIRKIILKTKGVESVNIEGGKDLVSVKGTMDVKEIVPYLNEKLKR 189

Query: 88  NVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEVH 147
           NVEVVP KK+ G                       DK    K++     G     KVEV+
Sbjct: 190 NVEVVPPKKEGG-----------------------DKKENNKKEGGGGGGAEGAAKVEVN 226

Query: 148 KMEYYGYPYPPAPSYWYDNHVYG------------QSYPMENQHQVVYANQGY------- 188
           KME+YGY YP    YW+ +  Y              SY +E Q    Y+NQGY       
Sbjct: 227 KMEHYGYAYPAPHMYWHGHGGYAPGESSSSSSSSNNSYEVEVQSGYSYSNQGYDGNYVNY 286

Query: 189 ---------------PPQMHHAPPMYHAPQMFSDENPNACSVM 216
                          PP   +  P +  PQMFSDENPNACSVM
Sbjct: 287 PYQHGYNDNYMAMAQPPPPFYLNPHHPPPQMFSDENPNACSVM 329

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823503|ref|XP_002879634.1| hypothetical protein ARALYDRAFT_482676 [Arabidopsis lyrata subsp. lyrata] gi|297325473|gb|EFH55893.1| hypothetical protein ARALYDRAFT_482676 [Arabidopsis lyrata subsp. lyrata]

 Score =  159 bits (401), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 120/239 (50%), Positives = 136/239 (56%), Gaps = 57/239 (23%)

Query: 29  VVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRN 88
           V LKIRLHCEGCI KIKKII K KGV+ V IDG KD+VTVKGTMDVKELVP L +KLKR 
Sbjct: 156 VPLKIRLHCEGCILKIKKIILKIKGVETVAIDGAKDVVTVKGTMDVKELVPLLTKKLKRT 215

Query: 89  VE-VVPAKKDDGEKKENKDADKGGDKKAKEAAPAT---------DKGGEKKEKEAAAAG- 137
           VE +VPAKKDDG  ++ K      D  AK+ APAT           GGEKK KEA   G 
Sbjct: 216 VEPLVPAKKDDGAAEKKKTEAAAPD--AKKEAPATGVNEAKKEGSDGGEKK-KEAGDGGE 272

Query: 138 ----GGDGGK------------------------VEVHKMEYYGY-PYPPAPSYWYDNHV 168
                GDGG+                          V+KM+YYGY  YP AP YW + HV
Sbjct: 273 KKKEAGDGGEKKKETGDGGEKKEGGGGGGVPAPVAMVNKMDYYGYSSYPTAPMYWQEGHV 332

Query: 169 YGQSYPMENQHQVV-----------YANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM 216
           YGQSY M  Q   V           YA++ Y P   ++ P  +AP MFSDENPN CSVM
Sbjct: 333 YGQSYSMGGQSYPVAGQSYPGSGYNYASESYVP---YSQPNVNAPGMFSDENPNGCSVM 388

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570770|ref|XP_003553557.1| PREDICTED: uncharacterized protein LOC100795652 [Glycine max]

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/217 (50%), Positives = 132/217 (60%), Gaps = 43/217 (19%)

Query: 28  TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87
           TVVLKIRLHC+GC+ KI+KII K+KGV++V I+GGKDLV+VKGTMDVKE+VPYL +KLKR
Sbjct: 134 TVVLKIRLHCDGCVQKIRKIILKSKGVESVNIEGGKDLVSVKGTMDVKEIVPYLNDKLKR 193

Query: 88  NVEVVPAKKDDGE-KKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEV 146
           NVEVVP KK+ G+ KKENK+   G  KK         +GG+K+E E  AA      KVEV
Sbjct: 194 NVEVVPPKKEGGDNKKENKEGGGGDSKK---------EGGKKQEGEDGAA------KVEV 238

Query: 147 HKMEYYGYP---------------YPPAPSYWYDNHVYGQSYPMENQ-HQVVYAN---QG 187
           +KME+YGY                Y P  S  Y+  V        NQ +   Y N   QG
Sbjct: 239 NKMEHYGYGYGYPPPPMYWYGHGGYAPGESSSYEAEVQPGYNSYSNQGYDGNYGNYHYQG 298

Query: 188 Y--------PPQMHHAPPMYHAPQMFSDENPNACSVM 216
           Y        PP   +  P +  PQMFSDENPNACSVM
Sbjct: 299 YNNNYMMAQPPPPFYLNPHHPPPQMFSDENPNACSVM 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18404283|ref|NP_565855.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] gi|20197942|gb|AAD31580.2| putative farnesylated protein [Arabidopsis thaliana] gi|330254231|gb|AEC09325.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana]

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/237 (49%), Positives = 134/237 (56%), Gaps = 53/237 (22%)

Query: 28  TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87
            V LKIRLHCEGCI KIKKII K KGV+ V IDG KD+VTVKGT+DVKELVP L +KLKR
Sbjct: 155 VVPLKIRLHCEGCIQKIKKIILKIKGVETVAIDGAKDVVTVKGTIDVKELVPLLTKKLKR 214

Query: 88  NVE-VVPAKKDDGEKKENKDADKGGDKKAKEAAPA--------TDKGGEKKEKEAAAAG- 137
            VE +VPAKKDDG   ENK  +       KEA  A           GGEKK KE    G 
Sbjct: 215 TVEPLVPAKKDDG-AAENKKTEAAAPDAKKEAPSAGVNEAKKEGSDGGEKK-KEVGDGGE 272

Query: 138 ----GGDGGK----------------------VEVHKMEYYGYP-YPPAPSYWYDNHVYG 170
               GGDGG+                        V+KM+YYGY  YP AP +W + HVYG
Sbjct: 273 KKKEGGDGGEKKKEAGDGGEKKKDGGGVPAPVAMVNKMDYYGYSAYPTAPMHWQEGHVYG 332

Query: 171 QSYPMENQHQVV-----------YANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM 216
           QSY M  Q+  V           YA++ Y P   +A P  +AP MFSDENPN CSVM
Sbjct: 333 QSYSMTGQNYPVGGQSYPGSGYNYASESYVP---YAQPNVNAPGMFSDENPNGCSVM 386

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4097545|gb|AAD09506.1| ATFP2, partial [Arabidopsis thaliana]

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/236 (48%), Positives = 132/236 (55%), Gaps = 51/236 (21%)

Query: 28  TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87
            V LKIRLHCEGCI KIKKII K KGV+ V IDG KD+VTVKGT+DVKELVP L +KLKR
Sbjct: 17  VVPLKIRLHCEGCIQKIKKIILKIKGVETVAIDGAKDVVTVKGTIDVKELVPLLTKKLKR 76

Query: 88  NVE-VVPAKKDDGEKKENKDADKGGDKK-------AKEAAPATDKGGEKKEKEAAAAG-- 137
            VE +VPAKKDDG  +  +      D K         EA      GGEKK KE    G  
Sbjct: 77  TVEPLVPAKKDDGAAEIRRTERAAPDAKKEAPSAGVNEAKKEGSDGGEKK-KEVGDGGEK 135

Query: 138 ---GGDGGK----------------------VEVHKMEYYGYP-YPPAPSYWYDNHVYGQ 171
              GGDGG+                        V+KM+YYGY  YP AP +W + HVYGQ
Sbjct: 136 KKEGGDGGEKKKEAGDGGEKKKDGGGVPAPVAMVNKMDYYGYSAYPTAPMHWQEGHVYGQ 195

Query: 172 SYPMENQHQVV-----------YANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM 216
           SY M  Q+  V           YA++ Y P   +A P  +AP MFSDENPN CSVM
Sbjct: 196 SYSMTGQNYPVGGQSYPGSGYNYASESYVP---YAQPNVNAPGMFSDENPNGCSVM 248

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548272|ref|XP_003542527.1| PREDICTED: uncharacterized protein LOC547884 [Glycine max]

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/209 (52%), Positives = 129/209 (61%), Gaps = 27/209 (12%)

Query: 28  TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87
           TVVLKI+LHC+GCI+KI++II + KGV  V++DG KDLVTVKGTMDVKE++PYL EKLKR
Sbjct: 130 TVVLKIKLHCDGCIAKIRRIILRFKGVQLVSLDGSKDLVTVKGTMDVKEMLPYLNEKLKR 189

Query: 88  NVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEVH 147
           NVEVVP  K D +KKE +    GG  + KE      +     EK+          +V ++
Sbjct: 190 NVEVVPPPKKDDDKKEKEGGGGGGGGEKKEGGGEKKEKEGDGEKKEKDGAAAAAAEV-IN 248

Query: 148 KMEYYGYPYPPAPSYWYD-NHVYGQ-SYPME---------NQHQVV--YANQGYPPQ--- 191
           KMEY     P  PS+WYD  H  GQ SY ME         N H V   Y NQGYP Q   
Sbjct: 249 KMEYMHRMAP--PSFWYDGGHFPGQTSYAMEVHPGYGASANNHYVEPGYVNQGYPLQPPL 306

Query: 192 ---MH-HAPPMYHAPQMFSDENPNACSVM 216
              MH HAPP    PQMFSDENPNACS+M
Sbjct: 307 PYYMHPHAPP----PQMFSDENPNACSIM 331

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413968366|gb|AFW90521.1| hypothetical protein [Phaseolus vulgaris]

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 114/211 (54%), Gaps = 46/211 (21%)

Query: 29  VVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRN 88
           VVLKIRLHCEGCI KI+++I K KGV++V ID  K+ V V GTMDV  +V YL+EKLKR 
Sbjct: 137 VVLKIRLHCEGCIQKIRRVILKIKGVESVNIDASKNWVNVNGTMDVNGMVAYLEEKLKRK 196

Query: 89  VEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEVHK 148
           VEVVP  K  GEKKE+   + GGD K K                          KVEV+K
Sbjct: 197 VEVVPVHKKSGEKKEDLKEENGGDGKRKSEP-----------------------KVEVNK 233

Query: 149 MEYYGYPYPPAPSYWYDNHV-----------------YGQSY-PMENQHQVVYANQGYPP 190
           ME YGY +PP P YWYD +                  Y  ++    +Q+   Y NQGY  
Sbjct: 234 MELYGYAFPPPPMYWYDGYGPGQSSSSGGFSVEVHSGYDSNFGNFPDQYPNGYGNQGYMV 293

Query: 191 QMH-----HAPPMYHAPQMFSDENPNACSVM 216
           Q       +  P +  PQMFSDENPNAC VM
Sbjct: 294 QQKPPPPFYFNPPHPPPQMFSDENPNACFVM 324

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4097571|gb|AAD09514.1| GMFP5, partial [Glycine max]

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/209 (52%), Positives = 129/209 (61%), Gaps = 27/209 (12%)

Query: 28  TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87
           TVVLKI+LHC+GCI+KI++II + KGV  V++DG KDLVTVKGTMDVKE++PYL EKLKR
Sbjct: 16  TVVLKIKLHCDGCIAKIRRIILRFKGVQLVSLDGSKDLVTVKGTMDVKEMLPYLNEKLKR 75

Query: 88  NVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEVH 147
           NVEVVP  K D +KKE +    GG  + KE      +     EK+          +V ++
Sbjct: 76  NVEVVPPPKKDDDKKEKEGGGGGGGGEKKEGGGEKKEKEGDGEKKEKDGAAAAAAEV-IN 134

Query: 148 KMEYYGYPYPPAPSYWYD-NHVYGQ-SYPME---------NQHQVV--YANQGYPPQ--- 191
           KMEY     P  PS+WYD  H  GQ SY ME         N H V   Y NQGYP Q   
Sbjct: 135 KMEYMHRMAP--PSFWYDGGHFPGQTSYAMEVHPGYGASANNHYVEPGYVNQGYPLQPPL 192

Query: 192 ---MH-HAPPMYHAPQMFSDENPNACSVM 216
              MH HAPP    PQMFSDENPNACS+M
Sbjct: 193 PYYMHPHAPP----PQMFSDENPNACSIM 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556920|ref|XP_002519493.1| metal ion binding protein, putative [Ricinus communis] gi|223541356|gb|EEF42907.1| metal ion binding protein, putative [Ricinus communis]

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/224 (46%), Positives = 129/224 (57%), Gaps = 50/224 (22%)

Query: 28  TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87
           TVVLKIR HC+GC+SK+KKII K KGVD+V++D  KDL+TVKGTMDV  +VPYL  KLKR
Sbjct: 137 TVVLKIRTHCDGCVSKMKKIIVKIKGVDSVSVDAPKDLLTVKGTMDVNTMVPYLNAKLKR 196

Query: 88  NVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGG----- 142
            VEVVP KKD+ +K+      +   +K +    A    GEKKE        GDGG     
Sbjct: 197 TVEVVPPKKDEPKKEGGGGGGEAKTEKKEGGGEAK---GEKKE--------GDGGKKDAP 245

Query: 143 -------KVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVY---ANQGYPPQM 192
                  K+EV K+EY+     PAP++W D  V+G SY  E  HQ  Y    +Q Y P M
Sbjct: 246 APAAEPPKMEVSKLEYFP---APAPTHWLDG-VFGHSYSAEPHHQQGYYPVNHQAYNPVM 301

Query: 193 HHAP----------------PMY----HAPQMFSDENPNACSVM 216
           +H                  PMY    HAPQMFS+ENPNACS+M
Sbjct: 302 NHGSYGYVQQGYVQQGYVMEPMYNHPMHAPQMFSEENPNACSIM 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440067|ref|XP_002282335.1| PREDICTED: uncharacterized protein LOC100244817 [Vitis vinifera] gi|297741643|emb|CBI32775.3| unnamed protein product [Vitis vinifera]

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 112/226 (49%), Positives = 132/226 (58%), Gaps = 36/226 (15%)

Query: 16  ADAGGKKDDGVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVK 75
           AD    K+  V TVVLKIRLHC+GCI KIKKII K+KGV  VT+D  KDLVTV G MDVK
Sbjct: 131 ADEKKPKETPVSTVVLKIRLHCDGCIHKIKKIISKSKGVKTVTVDSQKDLVTVTGPMDVK 190

Query: 76  ELVPYLKEKLKRNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDK---GGEKKEKE 132
           EL+PYLKEKL+R VE+V  KKDD    + +    G  K+        D    GGEKKE +
Sbjct: 191 ELIPYLKEKLRRTVEIVSPKKDDAGGDKKEKGGGGDKKEGGGEKKEGDGKAAGGEKKEGD 250

Query: 133 AAAAGGGD----GGKVEVHKMEYYG-----------------YPYPP-APSYWYDNHVYG 170
           A AA GG     G KVEV+KMEY+G                 + YP   PS WY+  +YG
Sbjct: 251 AKAASGGKQEEGGVKVEVNKMEYHGYGYAPPPQYYYGPPMYNHGYPAEGPSQWYEPPMYG 310

Query: 171 QSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM 216
           Q Y  E       ++ GY   + H PP    PQ+FSDENPNACSVM
Sbjct: 311 QGYSGEGP-----SHHGY--VVEHTPP----PQIFSDENPNACSVM 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
TAIR|locus:2057951	386	AT2G36950 [Arabidopsis thalian	0.300	0.168	0.621	1.3e-25
TAIR|locus:2142614	392	AT5G03380 [Arabidopsis thalian	0.305	0.168	0.606	9.4e-24
TAIR|locus:2046183	245	AT2G28090 [Arabidopsis thalian	0.314	0.277	0.455	3.1e-13
TAIR|locus:2167366	355	FP3 "farnesylated protein 3" [	0.310	0.188	0.328	5.3e-13
TAIR|locus:2075497	246	AT3G02960 "AT3G02960" [Arabido	0.310	0.272	0.328	2.8e-12
TAIR|locus:2163300	290	AT5G50740 [Arabidopsis thalian	0.310	0.231	0.328	6e-12
TAIR|locus:2153969	319	AT5G24580 "AT5G24580" [Arabido	0.314	0.213	0.294	4.7e-11
TAIR|locus:2018768	287	AT1G29000 [Arabidopsis thalian	0.310	0.233	0.298	1.5e-10
TAIR|locus:2121199	153	FP6 "farnesylated protein 6" [	0.305	0.431	0.303	4.5e-09
TAIR|locus:2096204	577	AT3G05220 [Arabidopsis thalian	0.217	0.081	0.407	8.2e-09

TAIR|locus:2057951 AT2G36950 [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
 Identities = 41/66 (62%), Positives = 46/66 (69%)

Query:    29 VVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRN 88
             V LKIRLHCEGC            GV+ V IDG KD+VTVKGT+DVKELVP L +KLKR 
Sbjct:   156 VPLKIRLHCEGCIQKIKKIILKIKGVETVAIDGAKDVVTVKGTIDVKELVPLLTKKLKRT 215

Query:    89 VE-VVP 93
             VE +VP
Sbjct:   216 VEPLVP 221

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2142614 AT5G03380 [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 9.4e-24, Sum P(2) = 9.4e-24
 Identities = 40/66 (60%), Positives = 45/66 (68%)

Query:    28 TVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87
             TVVLK +LHCEGC            GV++V ID  KDLV VKG +DVK+L PYL EKLKR
Sbjct:   155 TVVLKTKLHCEGCEHKIKRIVNKIKGVNSVAIDSAKDLVIVKGIIDVKQLTPYLNEKLKR 214

Query:    88 NVEVVP 93
              VEVVP
Sbjct:   215 TVEVVP 220

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2046183 AT2G28090 [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
 Identities = 31/68 (45%), Positives = 39/68 (57%)

Query:    26 VVTVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 85
             V TVVLK+   C+GC            GV  V +D  K+ VTV GTMD+K +   LK KL
Sbjct:   121 VTTVVLKVNCSCDGCIKRIQKAVSTTKGVYQVKMDKEKETVTVMGTMDIKSVTDNLKRKL 180

Query:    86 KRNVEVVP 93
             K+ V+VVP
Sbjct:   181 KKTVQVVP 188

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2167366 FP3 "farnesylated protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query:    26 VVTVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 85
             VVTVVLK+ +HCE C            GV++   D     VTVKG  + ++LV Y+ ++ 
Sbjct:   170 VVTVVLKVHMHCEACATEIKKRIMRMKGVESAESDLKSSQVTVKGVFEPQKLVEYVYKRT 229

Query:    86 KRNVEVV 92
              ++  ++
Sbjct:   230 GKHAAIM 236

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0046914 "transition metal ion binding" evidence=IDA

GO:0046916 "cellular transition metal ion homeostasis" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

TAIR|locus:2075497 AT3G02960 "AT3G02960" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query:    26 VVTVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 85
             + T +L++ +HCEGC            G+ +V  D  K  V V+G MD  +LV  +K+KL
Sbjct:   125 IKTAILRMNMHCEGCVHEIKRGIEKIKGIQSVEPDRSKSTVVVRGVMDPPKLVEKIKKKL 184

Query:    86 KRNVEVV 92
              ++ E++
Sbjct:   185 GKHAELL 191

GO:0005507 "copper ion binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2163300 AT5G50740 [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query:    26 VVTVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 85
             VVTVVL++ +HCE C            GV++V  D     V+VKG    ++LV ++ +++
Sbjct:   130 VVTVVLRVHMHCEACAMEIQKRIMRMKGVESVEPDFKASQVSVKGVFTPEKLVEFIYKRI 189

Query:    86 KRNVEVV 92
              ++  VV
Sbjct:   190 GKHAAVV 196

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2153969 AT5G24580 "AT5G24580" [Arabidopsis thaliana (taxid:3702)]

 Score = 102 (41.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
 Identities = 20/68 (29%), Positives = 31/68 (45%)

Query:    26 VVTVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 85
             + TV L + +HC+ C            GV     +     V V GTMD ++LV Y+  + 
Sbjct:   144 LTTVELSVNMHCQACADQLKKKILKMRGVQTTVTEHTTGKVIVTGTMDAEKLVDYVYRRT 203

Query:    86 KRNVEVVP 93
             K+   +VP
Sbjct:   204 KKQARIVP 211

GO:0005507 "copper ion binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2018768 AT1G29000 [Arabidopsis thaliana (taxid:3702)]

 Score = 97 (39.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query:    26 VVTVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 85
             ++T V K+ LHC  C            GV NV  D  K+ + VKG ++V ++   +++  
Sbjct:    14 IITAVYKVHLHCRKCACDIKKPLLRFQGVQNVDFDLEKNEIKVKGKIEVVKIHKQIEKWS 73

Query:    86 KRNVEVV 92
             K+ VE++
Sbjct:    74 KKKVELI 80

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2121199 FP6 "farnesylated protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 94 (38.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
 Identities = 20/66 (30%), Positives = 34/66 (51%)

Query:    28 TVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87
             TV +K+++ CEGC            GV +VT++     VTV G +D  ++V  +  +  +
Sbjct:    27 TVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGK 86

Query:    88 NVEVVP 93
              VE+ P
Sbjct:    87 KVELWP 92

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010286 "heat acclimation" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2096204 AT3G05220 [Arabidopsis thaliana (taxid:3702)]

 Score = 87 (35.7 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
 Identities = 22/54 (40%), Positives = 30/54 (55%)

Query:   169 YGQSYPMENQHQVVYANQGYPPQMH-HAPPMY--HAPQ---MFSDENPNACSVM 216
             YG  +  +  H ++YA   YP   + H PPM   H+     MFSDENP +CS+M
Sbjct:   525 YGGGHGGDMYHPMMYARP-YPAVNYAHPPPMPPPHSDSYTHMFSDENPGSCSIM 577

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.4__1736__AT2G36950.1 annotation not avaliable (388 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	216
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	4e-09
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	8e-04

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 29 VVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRN 88
           +    + C GC  K++K + K  GV +V++D     VTV G  D  +L     EKLK+ 
Sbjct: 1  TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKL-----EKLKKA 55

Query: 89 VE 90
          +E
Sbjct: 56 IE 57

Length = 62

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 35 LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG 70
          + C GC+SKI+K + K  GV++V +D      TV+ 
Sbjct: 7  MTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEY 42

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	216
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.5
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.43
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.3
KOG4656	247	consensus Copper chaperone for superoxide dismutas	99.03
PLN02957	238	copper, zinc superoxide dismutase	98.46
PRK10671	834	copA copper exporting ATPase; Provisional	98.32
TIGR00003	68	copper ion binding protein. This model describes a	97.92
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.79
PRK10671	834	copA copper exporting ATPase; Provisional	97.12
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.62
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	96.42
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.02
TIGR02052	92	MerP mercuric transport protein periplasmic compon	94.13
COG1888	97	Uncharacterized protein conserved in archaea [Func	90.23
PF02680	95	DUF211: Uncharacterized ArCR, COG1888; InterPro: I	90.1
cd00371	63	HMA Heavy-metal-associated domain (HMA) is a conse	88.49
PRK13748	561	putative mercuric reductase; Provisional	87.75
PF01883	72	DUF59: Domain of unknown function DUF59; InterPro:	86.3

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.50  E-value=9.9e-14  Score=101.05  Aligned_cols=68  Identities=44%  Similarity=0.686  Sum_probs=62.3

Q ss_pred             CceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEc
Q 027936           25 GVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        25 ~~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      ..++++|+|.|||++|+.+|++.|+.++||.++.+|...++|||.|.+|+..|++.|++..+.++.++
T Consensus         3 ~~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~   70 (73)
T KOG1603|consen    3 PIKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELW   70 (73)
T ss_pred             CccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEe
Confidence            45788999999999999999999999999999999999999999999999999999995444777766

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.43  E-value=6e-13  Score=92.43  Aligned_cols=58  Identities=28%  Similarity=0.514  Sum_probs=53.3

Q ss_pred             EEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhccCCc
Q 027936           30 VLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRN   88 (216)
Q Consensus        30 ~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~G~~   88 (216)
                      +|+|. |+|.+|+++|+++|++++||.++.+|+.+++|+|.+.   +++.+|.++|+ ++||.
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~-~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIE-KAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHH-HTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHH-HhCcC
Confidence            68994 9999999999999999999999999999999999987   45699999999 88873

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.30  E-value=1.1e-11  Score=90.09  Aligned_cols=66  Identities=23%  Similarity=0.495  Sum_probs=58.6

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEE--ee-cCCHHHHHHHHHhccCCcEEEc
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTV--KG-TMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV--~G-~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      +++++|+|. |+|.+|+.+|+++|..++||.+|.+|+..++++|  ++ .++.+.|+++|. .+||.+..+
T Consensus         1 ~~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~-~aGy~~~~~   70 (71)
T COG2608           1 MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIE-DAGYKVEEI   70 (71)
T ss_pred             CceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHH-HcCCCeeec
Confidence            467899996 9999999999999999999999999999966665  45 589999999999 999988754

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=99.03  E-value=9.3e-10  Score=95.75  Aligned_cols=72  Identities=19%  Similarity=0.399  Sum_probs=67.3

Q ss_pred             CceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCCCCC
Q 027936           25 GVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKKD   97 (216)
Q Consensus        25 ~~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p~k~   97 (216)
                      ..-+++|.|.|||++|++.|+..|..++||++|++|+..+.|.|.+++.+++|...|+ .+|+++.+....+.
T Consensus         5 ~~~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le-~tGr~Avl~G~G~p   76 (247)
T KOG4656|consen    5 DTYEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLE-NTGRDAVLRGAGKP   76 (247)
T ss_pred             CceeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHH-hhChheEEecCCch
Confidence            4567899999999999999999999999999999999999999999999999999999 99999999877554

>PLN02957 copper, zinc superoxide dismutase

Probab=98.46  E-value=1.2e-06  Score=76.94  Aligned_cols=71  Identities=23%  Similarity=0.450  Sum_probs=64.0

Q ss_pred             CceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCCCC
Q 027936           25 GVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKK   96 (216)
Q Consensus        25 ~~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p~k   96 (216)
                      ...++.|.|.|+|..|+.+|+++|..++||.++.+|+..++++|...++...|+..|+ ++|+.++++....
T Consensus         4 ~~~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~~~   74 (238)
T PLN02957          4 PELLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALE-QTGRKARLIGQGD   74 (238)
T ss_pred             CcEEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCcEEEecCCC
Confidence            3456788889999999999999999999999999999999999998888999999999 9999998886643

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.32  E-value=1.4e-06  Score=88.11  Aligned_cols=65  Identities=20%  Similarity=0.367  Sum_probs=59.0

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcC
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      +++++|+|. |+|.+|+.+|+++|.+++||.+|.+|+.  +++|++..+...|...|+ .+||.+.++.
T Consensus         2 ~~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~   67 (834)
T PRK10671          2 SQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIK-QAGYDASVSH   67 (834)
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHH-hcCCcccccc
Confidence            468999996 9999999999999999999999999994  567777789999999999 9999999875

>TIGR00003 copper ion binding protein

Probab=97.92  E-value=0.00013  Score=46.09  Aligned_cols=61  Identities=18%  Similarity=0.291  Sum_probs=50.5

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCc
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRN   88 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~   88 (216)
                      +++.|.|. |+|..|+..|++.|..+.+|..+.+++....++|..   ..+...+...|. ..|+.
T Consensus         2 ~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~   66 (68)
T TIGR00003         2 QKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAIL-DAGYE   66 (68)
T ss_pred             cEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHH-HcCCC
Confidence            46678996 999999999999999999999999999999988863   356777777776 66654

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.79  E-value=5.3e-05  Score=76.27  Aligned_cols=63  Identities=21%  Similarity=0.392  Sum_probs=56.7

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CC-HHHHHHHHHhccCCcEEE
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MD-VKELVPYLKEKLKRNVEV   91 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd-~~~L~~~L~kk~G~~vei   91 (216)
                      .++.|.|. |||..|+.+|+ +|.+++||..+.+++.+++++|...   .+ .+.+...++ .+||.+..
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~-~~gy~~~~   69 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVE-KAGYSARL   69 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHH-hcCccccc
Confidence            46789996 99999999999 9999999999999999999999743   56 789999999 99998876

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.12  E-value=0.0014  Score=66.71  Aligned_cols=65  Identities=18%  Similarity=0.393  Sum_probs=57.4

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEc
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .+++|.|. |+|..|+..|++.|..++||.++.+++.+++++|.+..++..|...|+ .+|+.+.++
T Consensus        99 ~~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~-~~Gy~a~~~  164 (834)
T PRK10671         99 DSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVE-KAGYGAEAI  164 (834)
T ss_pred             ceEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHH-hcCCCcccc
Confidence            35778886 999999999999999999999999999999999887778888888898 899987644

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.62  E-value=0.0047  Score=63.62  Aligned_cols=65  Identities=18%  Similarity=0.386  Sum_probs=58.4

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEc
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .++.|.|. |.|.+|..+|++.|.+++||.++.+++.+++++|.-   .+.+..+++.|. .+++...+.
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie-~~~~~~~~~  214 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIE-ETGFEASVR  214 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHH-hhcccceee
Confidence            78999996 999999999999999999999999999999999864   378899999999 888876554

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=96.42  E-value=0.0081  Score=60.67  Aligned_cols=65  Identities=14%  Similarity=0.280  Sum_probs=53.1

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec--CCHHHHHHHHHhccCCcEEE
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEV   91 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~--vd~~~L~~~L~kk~G~~vei   91 (216)
                      ...++.|+|. |+|.+|+.+|+++|..++||.++.+++.+.+++|...  .+ ..+...++ .+|+.+..
T Consensus        51 ~~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~-~~I~~aI~-~~Gy~a~~  118 (741)
T PRK11033         51 SGTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIR-AQVESAVQ-KAGFSLRD  118 (741)
T ss_pred             CCceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccch-HHHHHHHH-hccccccc
Confidence            3456788896 9999999999999999999999999999999888632  23 66677777 78887653

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.02  E-value=0.012  Score=60.72  Aligned_cols=61  Identities=13%  Similarity=0.321  Sum_probs=55.6

Q ss_pred             eecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee--cCCHHHHHHHHHhccCCcEEEcCCC
Q 027936           34 RLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG--TMDVKELVPYLKEKLKRNVEVVPAK   95 (216)
Q Consensus        34 ~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G--~vd~~~L~~~L~kk~G~~veiV~p~   95 (216)
                      .|+|..|.+.|+++|.+.+||.++.+++.+++.+|.-  .++++.|.+.|. ..|+.+.++...
T Consensus         2 gmtc~ac~~si~~~~~~~~g~~~i~vsl~~~~~~v~~~~~~~~~~i~~~ie-d~gf~~~~~~~~   64 (951)
T KOG0207|consen    2 GMTCSACSNSIEKAISRKPGVQKIEVSLAQKRANVSYDNIVSPESIKETIE-DMGFEASLLSDS   64 (951)
T ss_pred             CccHHHHhhhHHHHHhcCCCceeEEEEeccccceEEEeeccCHHHHHHHhh-cccceeeecccC
Confidence            5999999999999999999999999999999999864  488999999999 999999888653

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=94.13  E-value=0.79  Score=31.71  Aligned_cols=63  Identities=21%  Similarity=0.306  Sum_probs=47.3

Q ss_pred             EEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEE
Q 027936           28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEV   91 (216)
Q Consensus        28 tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~vei   91 (216)
                      ++.+.+. ++|..|...++..+....+|..+.++.....+.+.-   ..+...+...+. ..++.+++
T Consensus        24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~   90 (92)
T TIGR02052        24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATT-DAGYPSSL   90 (92)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEe
Confidence            5566775 999999999999999999998888888887766642   246666656665 66766543

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>COG1888 Uncharacterized protein conserved in archaea [Function unknown]

Probab=90.23  E-value=2  Score=33.45  Aligned_cols=68  Identities=25%  Similarity=0.396  Sum_probs=48.5

Q ss_pred             CCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEE-----eCC--CCeEEEeec-CCHHHHHHHHHhccCCcEEEc
Q 027936           24 DGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DGG--KDLVTVKGT-MDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        24 ~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~v-----D~~--t~kVtV~G~-vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .....++|.|- -|-+--.--+-+.|+++.||+-|.+     |..  +=++||.|+ +|-+.|.+.|+ .+|--+.+|
T Consensus         3 ~~iRRlVLDvlKP~~~p~ive~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE-~~Gg~IHSi   79 (97)
T COG1888           3 KGIRRLVLDVLKPHRGPTIVELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIE-ELGGAIHSI   79 (97)
T ss_pred             ccceeeeeeecCCcCCCcHHHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHH-HcCCeeeeh
Confidence            34566777774 3434445567778999999887654     333  445667786 99999999999 999888766

>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function

Probab=90.10  E-value=1.4  Score=34.25  Aligned_cols=66  Identities=26%  Similarity=0.454  Sum_probs=46.0

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEE-----eCCCCe--EEEeec-CCHHHHHHHHHhccCCcEEEc
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDL--VTVKGT-MDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~v-----D~~t~k--VtV~G~-vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .+..++|-|- -|-. -.--+-++|.+++||..|.+     |..+..  +||.|. +|.+.|.++|+ .+|-.+..|
T Consensus         3 ~irRlVLDVlKP~~p-~i~e~A~~l~~~~gV~gVnitv~EvD~ete~lkitiEG~~id~d~i~~~Ie-~~Gg~IHSI   77 (95)
T PF02680_consen    3 GIRRLVLDVLKPHEP-SIVELAKALSELEGVDGVNITVVEVDVETENLKITIEGDDIDFDEIKEAIE-ELGGVIHSI   77 (95)
T ss_dssp             SEEEEEEEEEEESSS--HHHHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEEEESSE-HHHHHHHHH-HTT-EEEEE
T ss_pred             ceeEEEEEeecCCCC-CHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEeCCCCHHHHHHHHH-HcCCeEEee
Confidence            4567788884 3444 45577888999999887764     444444  455686 99999999999 999887665

; PDB: 3BPD_I 2RAQ_F 2X3D_E.

>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

Probab=88.49  E-value=2.8  Score=23.19  Aligned_cols=49  Identities=33%  Similarity=0.556  Sum_probs=35.5

Q ss_pred             eecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec--CCHHHHHHHHH
Q 027936           34 RLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLK   82 (216)
Q Consensus        34 ~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~--vd~~~L~~~L~   82 (216)
                      .++|..|...+...+..+.++....+++....+.+...  .+...+...+.
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   56 (63)
T cd00371           6 GMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIE   56 (63)
T ss_pred             CeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEECCCCCHHHHHHHHH
Confidence            48899999999999999999887888877776666532  24444443443

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.

>PRK13748 putative mercuric reductase; Provisional

Probab=87.75  E-value=2.9  Score=40.23  Aligned_cols=64  Identities=20%  Similarity=0.325  Sum_probs=49.8

Q ss_pred             EEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee--cCCHHHHHHHHHhccCCcEEEcCC
Q 027936           30 VLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG--TMDVKELVPYLKEKLKRNVEVVPA   94 (216)
Q Consensus        30 ~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G--~vd~~~L~~~L~kk~G~~veiV~p   94 (216)
                      .+.+. |+|..|..+++..+..+++|....+++....+.+..  ..+...+...+. ..++.++++..
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~-~~g~~~~~~~~   69 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVA-GLGYRATLADA   69 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCeeeccCc
Confidence            45675 999999999999999999999999999888877763  245666666666 67777665544

>PF01883 DUF59: Domain of unknown function DUF59; InterPro: IPR002744 This family includes prokaryotic proteins of unknown function

Probab=86.30  E-value=1.3  Score=31.32  Aligned_cols=33  Identities=21%  Similarity=0.410  Sum_probs=23.3

Q ss_pred             eEEEEEEeecchhHH------HHHHHHHhcCCCccEEEE
Q 027936           27 VTVVLKIRLHCEGCI------SKIKKIIYKTKGVDNVTI   59 (216)
Q Consensus        27 ~tv~LKV~MhC~gCa------~kI~KaL~kl~GVesV~v   59 (216)
                      .++.|.|.+.+.+|.      ..|+.+|..++||.+|+|
T Consensus        34 ~~V~v~l~l~~~~~~~~~~l~~~i~~~l~~l~gv~~V~V   72 (72)
T PF01883_consen   34 GKVSVSLELPTPACPAAEPLREEIREALKALPGVKSVKV   72 (72)
T ss_dssp             CEEEEEE--SSTTHTTHHHHHHHHHHHHHTSTT-SEEEE
T ss_pred             CEEEEEEEECCCCchHHHHHHHHHHHHHHhCCCCceEeC
Confidence            456666666666665      788999999999999875

The family also includes PhaH (O84984 from SWISSPROT) from Pseudomonas putida. PhaH forms a complex with PhaF (O84982 from SWISSPROT), PhaG (O84983 from SWISSPROT) and PhaI (O84985 from SWISSPROT), which hydroxylates phenylacetic acid to 2-hydroxyphenylacetic acid []. So members of this family may all be components of ring hydroxylating complexes.; PDB: 3LNO_C 3CQ3_A 3CQ2_D 2CU6_B 3CQ1_A 3UX3_B 3UX2_A 1WCJ_A 1UWD_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	216
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	7e-11
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	8e-10
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	1e-08
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	3e-07
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	3e-07

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 56.0 bits (135), Expect = 7e-11
 Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 1/92 (1%)

Query: 10  KAAGAAADAGGKKDDGVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK 69
            +  +   +       + T+   +++ C+ C+  ++K +    GV +V +     +V V 
Sbjct: 2   SSGSSGMASDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVH 61

Query: 70  GTMDVKELVPYLKEKLKRNVEVVPAKKDDGEK 101
            T+  +E+   L E   R   +        + 
Sbjct: 62  TTLPSQEVQALL-EGTGRQAVLKGMGSGQLQN 92

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 55.8 bits (134), Expect = 8e-10
 Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 5/134 (3%)

Query: 23  DDGVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYL- 81
            +        I +HCE C++ IK  +    G++++  D  + +++V+ ++    ++  L 
Sbjct: 2   TNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR 61

Query: 82  ---KEKLKRNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPA-TDKGGEKKEKEAAAAG 137
              K+ + R      +      +   K         A          G  K   +    G
Sbjct: 62  NCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNG 121

Query: 138 GGDGGKVEVHKMEY 151
             + G       E 
Sbjct: 122 VPEAGNYHASIHEK 135

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 52.5 bits (125), Expect = 1e-08
 Identities = 11/61 (18%), Positives = 30/61 (49%)

Query: 23 DDGVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLK 82
           +        I +HCE C++ IK  +    G++++  D  + +++V+ ++    ++  L+
Sbjct: 3  TNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR 62

Query: 83 E 83
           
Sbjct: 63 N 63

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 45.4 bits (108), Expect = 3e-07
 Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 28 TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELV 78
               + + C GC   + +++ K  GV    ID     V ++    +  L+
Sbjct: 3  KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLL 52

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 28 TVVLKIRLHCEGCISKIKKIIYKTK-GVDNVTIDGGKDLVTVKGTMDVKELV 78
               + + C GC   + K++ K +  V  + I   K LV V  T+    ++
Sbjct: 6  HYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFIL 57

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	216
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.6
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.51
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.47
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.43
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.42
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.39
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.32
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.3
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.26
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.26
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.22
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.21
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.2
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.19
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.19
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.19
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.18
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.18
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.18
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.18
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.17
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.16
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.16
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.15
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.14
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.13
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.11
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.1
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	99.09
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.09
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.05
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.05
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.04
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.03
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.99
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.94
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.89
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.86
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.61
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.52
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.36
3bpd_A	100	Uncharacterized protein; heptamer, Mg+2 ION, PSI-2	89.69
2raq_A	97	Conserved protein MTH889; alpha-beta protein, stru	89.6
2x3d_A	96	SSO6206; unknown function; 2.70A {Sulfolobus solfa	89.3
3lno_A	108	Putative uncharacterized protein; alpha-beta fold,	81.95
3cq1_A	103	Putative uncharacterized protein TTHB138; DTDP-4-k	81.91

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.60  E-value=3.7e-15  Score=103.06  Aligned_cols=67  Identities=21%  Similarity=0.397  Sum_probs=63.2

Q ss_pred             ceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCC
Q 027936           26 VVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA   94 (216)
Q Consensus        26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p   94 (216)
                      |.+++|+|+|+|.+|+.+|+++|.+++|| ++.+|+.+++++|++.++++.|+++|+ ++||.+.++++
T Consensus         1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~   67 (68)
T 3iwl_A            1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLGL   67 (68)
T ss_dssp             -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTCSCEEEEEC
T ss_pred             CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCceEecCC
Confidence            45788999999999999999999999999 999999999999999999999999999 99999999875

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.51  E-value=9.2e-14  Score=96.38  Aligned_cols=67  Identities=22%  Similarity=0.386  Sum_probs=63.3

Q ss_pred             ceEEEEEEeecchhHHHHHHHHHhcCC-CccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcC
Q 027936           26 VVTVVLKIRLHCEGCISKIKKIIYKTK-GVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~-GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      +.+++|+|.|+|.+|+.+|+++|.+++ ||.++.+|+.+++++|.+.+++..|++.|+ ++||.+.++.
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~   71 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVRSGK   71 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCCceeee
Confidence            567899999999999999999999999 999999999999999999899999999999 9999998764

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.47  E-value=3.1e-13  Score=92.09  Aligned_cols=65  Identities=22%  Similarity=0.399  Sum_probs=60.9

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe--ecCCHHHHHHHHHhccCCcEEEc
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK--GTMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~--G~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      ++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.  +.+++..|++.|+ ++||.++++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~   69 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL   69 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HTTCEEEEC
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HcCCceEeC
Confidence            57899996 99999999999999999999999999999999998  6799999999999 999998864

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.43  E-value=4.4e-13  Score=93.48  Aligned_cols=68  Identities=21%  Similarity=0.419  Sum_probs=63.5

Q ss_pred             CCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCC
Q 027936           24 DGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA   94 (216)
Q Consensus        24 ~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p   94 (216)
                      +.+.+++|.|. |+|.+|+.+|+++|.+ +||..+.+|+.+++++|+.. ++..|+++|+ ++||.+.++++
T Consensus         2 ~~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~-~~Gy~~~~~~~   70 (73)
T 3fry_A            2 DSVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVE-AAGYQAKLRSS   70 (73)
T ss_dssp             CCCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHH-HTTCEEEECCS
T ss_pred             CccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHH-HcCCceEecCc
Confidence            35788999996 9999999999999999 99999999999999999988 9999999999 99999998764

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.42  E-value=4.4e-13  Score=92.73  Aligned_cols=67  Identities=9%  Similarity=0.235  Sum_probs=61.8

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcC
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      |.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .++...|+++|+ ++||.++++.
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   71 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE-DAGFEAEILA   71 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceEEcc
Confidence            468899996 999999999999999999999999999999999974   379999999999 9999998874

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=1.6e-12  Score=96.97  Aligned_cols=71  Identities=18%  Similarity=0.387  Sum_probs=65.5

Q ss_pred             CceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCCCC
Q 027936           25 GVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKK   96 (216)
Q Consensus        25 ~~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p~k   96 (216)
                      .+.+++|+|.|+|.+|+.+|+++|.+++||.+|.+|+.+++++|.+.+++..|++.|+ ++||.+.++....
T Consensus        17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~-~~Gy~~~~~~~~~   87 (98)
T 2crl_A           17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLE-GTGRQAVLKGMGS   87 (98)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEESCC
T ss_pred             cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCceEEccCCC
Confidence            4567889999999999999999999999999999999999999999899999999999 9999999876544

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.32  E-value=4e-12  Score=85.40  Aligned_cols=63  Identities=30%  Similarity=0.492  Sum_probs=58.4

Q ss_pred             EEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEc
Q 027936           29 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        29 v~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      ++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|.+.|+ ++||.+..+
T Consensus         2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~   65 (66)
T 2roe_A            2 LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVE-EEGYKAEVL   65 (66)
T ss_dssp             BCEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHH-TTTCEEEEC
T ss_pred             EEEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHH-HcCCCcEec
Confidence            468896 999999999999999999999999999999999987789999999999 999988765

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.30  E-value=3.7e-12  Score=83.60  Aligned_cols=61  Identities=20%  Similarity=0.366  Sum_probs=56.8

Q ss_pred             EEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcE
Q 027936           28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNV   89 (216)
Q Consensus        28 tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~v   89 (216)
                      +++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.++...|.+.|+ ++||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~G~~~   63 (64)
T 2xmm_A            2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGYEV   63 (64)
T ss_dssp             CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHH-HTTCCC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence            4678995 999999999999999999999999999999999998889999999999 899865

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.26  E-value=2.7e-11  Score=81.40  Aligned_cols=64  Identities=19%  Similarity=0.432  Sum_probs=58.0

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcE
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNV   89 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~v   89 (216)
                      .+.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .++...|++.|. .+||.+
T Consensus         3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   70 (71)
T 2l3m_A            3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE-DQGYDV   70 (71)
T ss_dssp             SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHH-HTTCEE
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCC
Confidence            4678899996 999999999999999999999999999999999973   478899999999 899865

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.26  E-value=3.7e-11  Score=80.24  Aligned_cols=66  Identities=20%  Similarity=0.341  Sum_probs=58.3

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec--CCHHHHHHHHHhccCCcEEEc
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~--vd~~~L~~~L~kk~G~~veiV   92 (216)
                      +.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...  ++...|+..|. .+||.+.++
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~   70 (71)
T 2xmw_A            2 AQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL   70 (71)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHH-HHTCEEEEE
T ss_pred             CcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcCCCceeC
Confidence            467889996 9999999999999999999999999999999999743  67889999999 899987653

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.22  E-value=6e-11  Score=79.64  Aligned_cols=65  Identities=18%  Similarity=0.344  Sum_probs=58.5

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhccCCcEEEc
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~G~~veiV   92 (216)
                      ++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   ++...|++.|. .+||.+.++
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   71 (72)
T 1aw0_A            3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEC
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHH-HCCCCcEeC
Confidence            46789996 9999999999999999999999999999999999754   67899999999 899987764

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.21  E-value=6.1e-11  Score=79.60  Aligned_cols=66  Identities=24%  Similarity=0.295  Sum_probs=59.1

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEc
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      +.+++|+|. |+|.+|+.+|+++|..++||.++.+|+.+++++|..   .++...|+..|. .+||.+.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   71 (72)
T 1osd_A            2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred             ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEec
Confidence            457889996 999999999999999999999999999999999974   368899999999 999987654

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.20  E-value=1.4e-10  Score=79.04  Aligned_cols=66  Identities=15%  Similarity=0.234  Sum_probs=58.2

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecC-CHHHHHHHHHhccCCcEEEc
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTM-DVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~v-d~~~L~~~L~kk~G~~veiV   92 (216)
                      +.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.... ....|+..|. .+||.+...
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~-~~Gy~~~~~   69 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE   69 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCEEEEC
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHH-HcCCccccc
Confidence            567899996 99999999999999999999999999999999997542 3678889998 899987654

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.19  E-value=7.6e-11  Score=85.46  Aligned_cols=70  Identities=16%  Similarity=0.261  Sum_probs=61.0

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhcc---CCcEEEcCCCCC
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKL---KRNVEVVPAKKD   97 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~---G~~veiV~p~k~   97 (216)
                      .+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .++...|++.|. .+   ||.+.++.+...
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~-~~g~Ggy~~~~~~~~~~   79 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE-AVSPGLYRVSITSEVEI   79 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHH-TTSTTTCEEECCCCC--
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-hccCCCeEEEEeCCCcc
Confidence            46789996 999999999999999999999999999999999974   468899999999 88   599988876543

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.19  E-value=1.1e-10  Score=76.36  Aligned_cols=63  Identities=17%  Similarity=0.359  Sum_probs=56.4

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcE
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNV   89 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~v   89 (216)
                      |.+++|+|. |+|.+|+.+|+++|..++||.++.+|+.+++++|..   .++...|...|. .+||.+
T Consensus         1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   67 (69)
T 2qif_A            1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCc
Confidence            346789996 999999999999999999999999999999999974   468899999999 899865

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.19  E-value=1.6e-10  Score=78.73  Aligned_cols=65  Identities=17%  Similarity=0.302  Sum_probs=58.7

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEc
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .+++|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|..   .++...|...|. .+||.+.++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~   70 (75)
T 3cjk_B            2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIH   70 (75)
T ss_dssp             EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEEEE
T ss_pred             cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEee
Confidence            46789996 999999999999999999999999999999999974   367899999999 999988765

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.18  E-value=3e-11  Score=87.68  Aligned_cols=65  Identities=20%  Similarity=0.219  Sum_probs=58.5

Q ss_pred             CCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcE
Q 027936           24 DGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNV   89 (216)
Q Consensus        24 ~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~v   89 (216)
                      ..+.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...+++..|++.|+ .+||.+
T Consensus        19 ~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~-~~Gy~~   84 (85)
T 2k2p_A           19 FQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIIT-AAGYTP   84 (85)
T ss_dssp             ---CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHH-HTTCCC
T ss_pred             ccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence            45567889996 999999999999999999999999999999999998899999999999 899864

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.18  E-value=7.7e-11  Score=79.09  Aligned_cols=66  Identities=17%  Similarity=0.310  Sum_probs=59.4

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee--cCCHHHHHHHHHhccCCcEEEcC
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG--TMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G--~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      ++++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..  .++...|...|. .+||.+.++.
T Consensus         2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~~   70 (72)
T 1fvq_A            2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR   70 (72)
T ss_dssp             EEEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHH-HHTCCEEEEE
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HCCCceEEcc
Confidence            36789996 999999999999999999999999999999999974  467899999999 8999988763

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.18  E-value=1e-10  Score=77.40  Aligned_cols=63  Identities=21%  Similarity=0.456  Sum_probs=56.8

Q ss_pred             EEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEc
Q 027936           29 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        29 v~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      ++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .++...|.+.|. .+||.+.++
T Consensus         2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   68 (68)
T 1cpz_A            2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI   68 (68)
T ss_dssp             CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred             EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcccC
Confidence            368885 999999999999999999999999999999999975   368899999999 999988764

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.18  E-value=7.9e-11  Score=83.28  Aligned_cols=70  Identities=21%  Similarity=0.335  Sum_probs=62.1

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcCCC
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPAK   95 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~p~   95 (216)
                      ...+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .++...|+..|. .+||.+.++..+
T Consensus         7 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~   80 (84)
T 1q8l_A            7 GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQP   80 (84)
T ss_dssp             SCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCCT
T ss_pred             CceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEecCCc
Confidence            3467889996 999999999999999999999999999999999975   368899999999 999998877543

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.17  E-value=1.1e-10  Score=80.53  Aligned_cols=68  Identities=19%  Similarity=0.334  Sum_probs=61.0

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcC
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      ...+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .++...|++.|. .+||.+.++.
T Consensus         6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   77 (79)
T 1kvi_A            6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN   77 (79)
T ss_dssp             TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHCCCEEECC
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HCCCceEecC
Confidence            4567899996 999999999999999999999999999999999974   367899999999 8999987764

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.16  E-value=1.2e-10  Score=78.52  Aligned_cols=67  Identities=16%  Similarity=0.341  Sum_probs=59.9

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEc
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .+.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .++...|...|. .+||.+.++
T Consensus         4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   74 (76)
T 1opz_A            4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHVVIE   74 (76)
T ss_dssp             CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEECC
T ss_pred             cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceecC
Confidence            4677899996 999999999999999999999999999999999973   468899999999 899987654

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.16  E-value=6.7e-11  Score=81.42  Aligned_cols=67  Identities=10%  Similarity=0.342  Sum_probs=60.5

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcC
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      |.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .++...|.+.|. .+||.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   72 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR-ELGFGATVIE   72 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHH-HHTSCEEEES
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEECC
Confidence            567899996 999999999999999999999999999999999975   367889999999 8999987754

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.15  E-value=1.1e-10  Score=77.32  Aligned_cols=64  Identities=17%  Similarity=0.329  Sum_probs=57.5

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEE
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVE   90 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~ve   90 (216)
                      +.+++|+|. |+|.+|+.+|+++|..++||.++.+|+.+++++|..   .++...|...|. .+||.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~   69 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLA   69 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHH-TTTCEEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcc
Confidence            567789997 999999999999999999999999999999999974   367888999999 8999764

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.14  E-value=1.2e-10  Score=78.02  Aligned_cols=63  Identities=19%  Similarity=0.320  Sum_probs=56.2

Q ss_pred             EEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec--CCHHHHHHHHHhccCCcEEEc
Q 027936           29 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        29 v~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~--vd~~~L~~~L~kk~G~~veiV   92 (216)
                      ++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...  .+...|+..|+ .+||.+.+.
T Consensus         2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~   67 (69)
T 2kt2_A            2 THLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA-GLGYKATLA   67 (69)
T ss_dssp             CCEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHH-TTTSEEECC
T ss_pred             EEEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HCCCceEeC
Confidence            357886 9999999999999999999999999999999999743  67899999999 999987654

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.13  E-value=7.2e-11  Score=79.60  Aligned_cols=62  Identities=23%  Similarity=0.342  Sum_probs=55.3

Q ss_pred             EEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEc
Q 027936           28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        28 tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      +++|.|. |+|.+|+.+|+++|.++ ||.++.+|+.+++++|....+ ..|...|+ .+||.+..+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~-~~Gy~~~~~   64 (67)
T 2kyz_A            2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLE-EIDYPVESY   64 (67)
T ss_dssp             EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHH-TTTCCCCBC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHH-HcCCceeeE
Confidence            4678995 99999999999999999 999999999999999987655 88999999 999976543

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.11  E-value=1.5e-10  Score=76.17  Aligned_cols=61  Identities=20%  Similarity=0.341  Sum_probs=54.6

Q ss_pred             EEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec--CCHHHHHHHHHhccCCcE
Q 027936           28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNV   89 (216)
Q Consensus        28 tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~--vd~~~L~~~L~kk~G~~v   89 (216)
                      +++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...  .+...|.+.|+ .+||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~   65 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL-DAGQEV   65 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HHTCCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCCc
Confidence            4678896 9999999999999999999999999999999999743  57889999999 889864

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.10  E-value=3.5e-10  Score=77.52  Aligned_cols=67  Identities=24%  Similarity=0.388  Sum_probs=60.1

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcC
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      |.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .++...|...|. .+||.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~   72 (80)
T 1jww_A            2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKG   72 (80)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHH-HHTSEEEECC
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCeEEecC
Confidence            467889996 999999999999999999999999999999999964   468899999999 8999987754

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.09  E-value=2.6e-10  Score=97.70  Aligned_cols=70  Identities=19%  Similarity=0.442  Sum_probs=64.3

Q ss_pred             ceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCCCC
Q 027936           26 VVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKK   96 (216)
Q Consensus        26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p~k   96 (216)
                      ..+++|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|+++|+ ++||.+.++....
T Consensus         5 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~-~~Gy~a~~~~~~~   74 (222)
T 1qup_A            5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGK   74 (222)
T ss_dssp             CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEECCSC
T ss_pred             ceEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHH-HcCCccccccCCC
Confidence            356788999999999999999999999999999999999999999899999999999 9999998876543

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.09  E-value=2.9e-10  Score=76.78  Aligned_cols=65  Identities=17%  Similarity=0.376  Sum_probs=57.5

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhccCCcEEEc
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   ++...|...|. .+||.+.+.
T Consensus         4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   72 (75)
T 1yjr_A            4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE-SLGFEPSLV   72 (75)
T ss_dssp             CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHH-HHHCEEEES
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCceee
Confidence            35789996 9999999999999999999999999999999999754   56788999999 899987654

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.05  E-value=1.3e-09  Score=78.92  Aligned_cols=70  Identities=13%  Similarity=0.177  Sum_probs=62.1

Q ss_pred             CCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhccCCcEEEcCC
Q 027936           24 DGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVPA   94 (216)
Q Consensus        24 ~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~G~~veiV~p   94 (216)
                      ..+.+++|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|...   ++...|+..|. .+||.+.++..
T Consensus        13 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~   86 (95)
T 2kkh_A           13 KKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN-EARLEANVRVN   86 (95)
T ss_dssp             SCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCC
T ss_pred             cceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEecC
Confidence            35678899996 9999999999999999999999999999999999753   57899999999 89999887644

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.04  E-value=5.1e-10  Score=86.23  Aligned_cols=69  Identities=23%  Similarity=0.398  Sum_probs=62.0

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe---ecCCHHHHHHHHHhccCCcEEEcCCC
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELVPYLKEKLKRNVEVVPAK   95 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~---G~vd~~~L~~~L~kk~G~~veiV~p~   95 (216)
                      ..+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.   +.+++..|++.|+ .+||.+.++.+.
T Consensus        73 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~  145 (151)
T 1p6t_A           73 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGEQ  145 (151)
T ss_dssp             CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCSS
T ss_pred             ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCCeEEcCcc
Confidence            357889996 99999999999999999999999999999999997   3578999999999 999999886543

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.03  E-value=8.4e-10  Score=84.42  Aligned_cols=66  Identities=14%  Similarity=0.347  Sum_probs=59.4

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhccCCcEEEc
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~G~~veiV   92 (216)
                      ..+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   +++..|++.|. .+||.+.++
T Consensus        79 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~  148 (149)
T 2ew9_A           79 DGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE-EIGFHASLA  148 (149)
T ss_dssp             SSEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH-HHTCEEECC
T ss_pred             cceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hCCCceEec
Confidence            357889996 9999999999999999999999999999999999743   68899999999 999987654

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.99  E-value=8.6e-10  Score=96.19  Aligned_cols=68  Identities=18%  Similarity=0.445  Sum_probs=63.0

Q ss_pred             ceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCC
Q 027936           26 VVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA   94 (216)
Q Consensus        26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p   94 (216)
                      ..+++|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|+++|+ ++||.+.++..
T Consensus         6 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~   73 (249)
T 1jk9_B            6 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGA   73 (249)
T ss_dssp             CEEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTTCCCEEEEE
T ss_pred             ceeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHH-HhCCCcccccC
Confidence            356788889999999999999999999999999999999999998899999999999 99999887654

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.94  E-value=9.1e-10  Score=74.72  Aligned_cols=58  Identities=19%  Similarity=0.409  Sum_probs=50.4

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcE
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNV   89 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~v   89 (216)
                      .+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+..+    .+.|. .+||.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~-~~Gy~~   61 (71)
T 2aj0_A            3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVE-QAGAFE   61 (71)
T ss_dssp             CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHH-HHHTTT
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHH-HhCCCc
Confidence            46789997 999999999999999999999999999999999987764    44666 777754

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.89  E-value=5.5e-09  Score=85.48  Aligned_cols=67  Identities=21%  Similarity=0.406  Sum_probs=59.9

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcCC
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPA   94 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~p   94 (216)
                      .+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .+++..|+..|. .+||.+.++..
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~  192 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE-DMGFEASVVSE  192 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSCEEEC--
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEcCC
Confidence            57889996 999999999999999999999999999999999974   468899999999 99999988754

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.86  E-value=9.3e-09  Score=78.55  Aligned_cols=67  Identities=21%  Similarity=0.373  Sum_probs=60.3

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcC
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      +.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .+++..|...|. .+||.+.++.
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~   73 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ-DLGFEAAVME   73 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHh-cCCCceEeec
Confidence            578899996 999999999999999999999999999999999964   367889999999 8999887654

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.61  E-value=9.1e-08  Score=78.19  Aligned_cols=66  Identities=26%  Similarity=0.399  Sum_probs=56.2

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhcc---CCcEEE
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKL---KRNVEV   91 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~---G~~vei   91 (216)
                      .+.+++|+|. |+|.+|+.+|+++|.+++||.++.+++.+++++|...   +++..|...|+ .+   ++.+.+
T Consensus        18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~~~gg~~v~~   90 (202)
T 2rop_A           18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE-ALPPGNFKVSL   90 (202)
T ss_dssp             --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHT-TSSSSCSEEEC
T ss_pred             ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HhccCCeEEEe
Confidence            4677889997 9999999999999999999999999999999999743   67889999999 77   366643

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.52  E-value=2.4e-07  Score=71.08  Aligned_cols=64  Identities=17%  Similarity=0.360  Sum_probs=55.9

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcE
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNV   89 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~v   89 (216)
                      .+.+++|.|. |+|.+|+.+|+++|..++||.++.+++.+++++|..   .++...|...|+ .+|+.+
T Consensus         4 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   71 (151)
T 1p6t_A            4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV   71 (151)
T ss_dssp             CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred             cceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHH-HcCCcc
Confidence            3466789996 999999999999999999999999999999999863   367888999998 888854

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.36  E-value=7.4e-07  Score=87.27  Aligned_cols=63  Identities=14%  Similarity=0.365  Sum_probs=57.7

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEE
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVE   90 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~ve   90 (216)
                      ++++|+|. |||.+|+.+|+++|.+++||.++.+|+.+++++|+.   .++.+.|++.|+ ++||.+.
T Consensus         2 m~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~-~~Gy~~~   68 (723)
T 3j09_A            2 MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE-DLGYGVV   68 (723)
T ss_dssp             CCEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHCCEES
T ss_pred             eeEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHH-hcCCccc
Confidence            45789997 999999999999999999999999999999999963   478999999999 9999874

>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1

Probab=89.69  E-value=1.1  Score=34.15  Aligned_cols=67  Identities=19%  Similarity=0.295  Sum_probs=49.5

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEE-----eCCCCe--EEEeec-CCHHHHHHHHHhccCCcEEEcC
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDL--VTVKGT-MDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~v-----D~~t~k--VtV~G~-vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      .+..++|-|- -|-. -.-.+-++|.+++||..|.+     |..+..  +||.|. +|.+.|.++|+ ++|-.+..|.
T Consensus         5 ~iRRlVLDVlKPh~P-~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE-~~GgvIHSID   80 (100)
T 3bpd_A            5 GLRRLVLDVLKPHEP-KTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSVD   80 (100)
T ss_dssp             SEEEEEEEEEEESCS-CHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEEE
T ss_pred             cceEEEEEecCCCCC-CHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence            4677888884 4444 45577888999999988764     444444  445676 99999999999 9998876653

>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1

Probab=89.60  E-value=1.2  Score=33.66  Aligned_cols=68  Identities=25%  Similarity=0.465  Sum_probs=50.1

Q ss_pred             CCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEE-----eCCCCeE--EEeec-CCHHHHHHHHHhccCCcEEEcC
Q 027936           24 DGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDLV--TVKGT-MDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        24 ~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~v-----D~~t~kV--tV~G~-vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      ..+..++|-|- -|-. -.-.+-++|.+++||..|.+     |..+..+  ||.|. +|.+.|.++|+ ++|-.+..|.
T Consensus         4 ~~irRlVLDVlKPh~p-~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE-~~Gg~IHSID   80 (97)
T 2raq_A            4 KGLIRIVLDILKPHEP-IIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSVD   80 (97)
T ss_dssp             CSEEEEEEEEECCSCS-CHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred             cCceEEEEEecCCCCC-CHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence            35678888884 4444 34577788999999887764     4455544  45676 99999999999 9998876653

>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}

Probab=89.30  E-value=1.5  Score=33.21  Aligned_cols=67  Identities=18%  Similarity=0.326  Sum_probs=49.6

Q ss_pred             CceEEEEEEe--ecchhHHHHHHHHHhcCCCccEEEE-----eCCCCe--EEEeec-CCHHHHHHHHHhccCCcEEEcC
Q 027936           25 GVVTVVLKIR--LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDL--VTVKGT-MDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        25 ~~~tv~LKV~--MhC~gCa~kI~KaL~kl~GVesV~v-----D~~t~k--VtV~G~-vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      .+..++|-|-  +|-..-. .+-++|.+++||..|.+     |..+..  +||.|. +|.+.|.++|+ ++|-.+..|.
T Consensus         3 ~irRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE-~~Gg~IHSID   79 (96)
T 2x3d_A            3 AIRRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLE-EEGCAIHSID   79 (96)
T ss_dssp             CEEEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred             ceEEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence            3567888883  5666544 67788999999988765     444444  455686 99999999999 9998877653

>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0

Probab=81.95  E-value=1.1  Score=33.41  Aligned_cols=35  Identities=20%  Similarity=0.516  Sum_probs=27.8

Q ss_pred             EEEEEEeecchhH------HHHHHHHH-hcCCCccEEEEeCC
Q 027936           28 TVVLKIRLHCEGC------ISKIKKII-YKTKGVDNVTIDGG   62 (216)
Q Consensus        28 tv~LKV~MhC~gC------a~kI~KaL-~kl~GVesV~vD~~   62 (216)
                      .|.|.+.|++.+|      ...|+.+| ..++||.+|.|++.
T Consensus        45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~   86 (108)
T 3lno_A           45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVV   86 (108)
T ss_dssp             CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred             eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEE
Confidence            4666677777777      56789999 89999999988764

>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*

Probab=81.91  E-value=1.2  Score=32.83  Aligned_cols=35  Identities=17%  Similarity=0.478  Sum_probs=27.8

Q ss_pred             EEEEEEeecchhHH------HHHHHHHhcCCCccEEEEeCC
Q 027936           28 TVVLKIRLHCEGCI------SKIKKIIYKTKGVDNVTIDGG   62 (216)
Q Consensus        28 tv~LKV~MhC~gCa------~kI~KaL~kl~GVesV~vD~~   62 (216)
                      .|.|.+.+.+.+|-      ..|+.+|..++||.+|.|++.
T Consensus        42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~   82 (103)
T 3cq1_A           42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT   82 (103)
T ss_dssp             EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred             EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence            45666777887774      578999999999999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	216
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	6e-08
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-06
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	9e-06
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	1e-05
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	3e-05
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	7e-05
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	8e-05
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-04
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	2e-04
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	8e-04
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	9e-04
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	0.001
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	0.002
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	0.004

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.3 bits (110), Expect = 6e-08
 Identities = 10/56 (17%), Positives = 28/56 (50%)

Query: 23 DDGVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELV 78
           +        I +HCE C++ IK  +    G++++  D  + +++V+ ++    ++
Sbjct: 2  TNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTII 57

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.8 bits (101), Expect = 1e-06
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 28 TVVLKIRLHCEGCISKIKKIIYKTK-GVDNVTIDGGKDLVTVKGTMDVKELVPYLKE 83
               + + C GC   + K++ K +  V  + I   K LV V  T+    ++  +K+
Sbjct: 5  HYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 61

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 40.1 bits (94), Expect = 9e-06
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELV 78
          TV L +  + C  C   +KK I K +GV  V +        V        V++L 
Sbjct: 4  TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLT 58

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 3/54 (5%)

Query: 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTID--GGKDLVTVKGTMDVKELV 78
           V+L +  + C  C + I   +   KGV    I     +  VT    +    + 
Sbjct: 3  EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIK 56

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 38.8 bits (90), Expect = 3e-05
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELV 78
          T+ L +  + CE C   + K +        V +D     VT+   +  ++L 
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLR 53

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (88), Expect = 7e-05
 Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK 69
          GV +V + +  + C  C+  I++ I K  GV ++ +   +   T+ 
Sbjct: 6  GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATII 51

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 37.5 bits (87), Expect = 8e-05
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 31 LKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVE 90
            + + C GC   + +++ K  GV    ID     V ++    +  L+  L +K  + V 
Sbjct: 5  FSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATL-KKTGKTVS 62

Query: 91 VV 92
           +
Sbjct: 63 YL 64

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 2e-04
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELV 78
            V+ I  + C  C+  I+ +I K  GV ++ +       TV+        + L 
Sbjct: 4  ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLR 58

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 36.3 bits (84), Expect = 2e-04
 Identities = 8/55 (14%), Positives = 23/55 (41%), Gaps = 4/55 (7%)

Query: 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELV 78
           + +++  + C  C ++I+K + +  GV +  ++   + V V           + 
Sbjct: 7  EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQ 61

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 34.8 bits (80), Expect = 8e-04
 Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKE 76
              K+  + C  C  K++  + +  GV+ V +    + + V    D++ 
Sbjct: 4  RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRA 53

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 34.9 bits (80), Expect = 9e-04
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELV 78
               I  + C  C ++I+K + K +GV N  ++   + VTV+       V +L 
Sbjct: 3  KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLK 57

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 34.4 bits (79), Expect = 0.001
 Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK 69
             L++  + C+ C+  ++  + +  GV  V ++     V V 
Sbjct: 3  QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVS 45

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (78), Expect = 0.002
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 19 GGKKDDGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTID 60
          G     G V + +K+  + C  C S I+  I K +GV  + + 
Sbjct: 1  GSMAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVS 43

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 32.8 bits (75), Expect = 0.004
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 35 LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELV 78
          + C  C+++I++ + +  GV  V +   K+   VK     +   E+ 
Sbjct: 9  MSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEIC 55

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	216
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.68
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.68
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.67
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.56
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.52
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.5
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.5
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.49
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.48
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.47
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.46
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.42
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.4
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.4
d2raqa1	93	Uncharacterized protein MTH889 {Methanobacterium t	89.36
d3bpda1	91	Uncharacterized protein AF1549 {Archaeoglobus fulg	89.31
d1uwda_	102	Hypothetical protein TM0487 {Thermotoga maritima [	85.27
d2cu6a1	91	Hypothetical protein TTHB138 {Thermus thermophilus	84.01

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.68  E-value=5.2e-17  Score=113.86  Aligned_cols=64  Identities=22%  Similarity=0.423  Sum_probs=61.3

Q ss_pred             EEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcC
Q 027936           28 TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        28 tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      +++|+|+|||.+|+++|+++|.+++|| +|.+|+.+++|+|++.++++.|+++|+ ++||++++++
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~-~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHH-HhCCeEEEee
Confidence            579999999999999999999999998 699999999999999999999999999 9999999875

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=8.7e-17  Score=114.44  Aligned_cols=65  Identities=23%  Similarity=0.410  Sum_probs=62.1

Q ss_pred             CceEEEEEEeecchhHHHHHHHHHhcC-CCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEE
Q 027936           25 GVVTVVLKIRLHCEGCISKIKKIIYKT-KGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVE   90 (216)
Q Consensus        25 ~~~tv~LKV~MhC~gCa~kI~KaL~kl-~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~ve   90 (216)
                      .+++++|+|+|||.+|+++|+++|.++ +||.+|.+|+.+++|+|.|.++++.|+++|+ ++||.|.
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~-~~G~~~~   67 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVR   67 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHH-HHCCccC
Confidence            478999999999999999999999999 4999999999999999999999999999999 9999886

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=6.8e-17  Score=114.79  Aligned_cols=67  Identities=16%  Similarity=0.439  Sum_probs=63.4

Q ss_pred             ceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcC
Q 027936           26 VVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      ...++|+|+|||.+|+++|+++|.+++||.+|.+|+.+++|+|++.++++.|+++|+ ++||++.+.+
T Consensus         5 ~~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~-~~G~~A~l~g   71 (72)
T d1qupa2           5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRG   71 (72)
T ss_dssp             CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEEC
T ss_pred             cEEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHH-HhCCCEEEec
Confidence            457789999999999999999999999999999999999999999999999999999 9999998854

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.56  E-value=1e-15  Score=105.92  Aligned_cols=63  Identities=21%  Similarity=0.394  Sum_probs=59.7

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEE
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVE   90 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~ve   90 (216)
                      ++++|+|. |+|.+|+.+|+++|.+++||.+|.+|+.+++|+|++.++++.|+++|. .+||+++
T Consensus         1 Mt~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~-~~GY~ve   64 (64)
T d1sb6a_           1 MTIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGHEVE   64 (64)
T ss_dssp             CEEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHH-HHCCCCC
T ss_pred             CeEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHH-HcCCCCC
Confidence            36889996 999999999999999999999999999999999999999999999999 9999874

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=9.4e-15  Score=103.05  Aligned_cols=66  Identities=17%  Similarity=0.332  Sum_probs=61.7

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe--ecCCHHHHHHHHHhccCCcEEEcC
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK--GTMDVKELVPYLKEKLKRNVEVVP   93 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~--G~vd~~~L~~~L~kk~G~~veiV~   93 (216)
                      ++++|.|. |||.+|+.+|+++|.+++||.+|.||+.+++++|+  ..++++.|+++|+ .+||.++++.
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHH-HTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHH-HhCCCeEEcc
Confidence            57999996 99999999999999999999999999999999997  4589999999999 9999999874

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.50  E-value=3.5e-14  Score=99.18  Aligned_cols=63  Identities=17%  Similarity=0.359  Sum_probs=58.9

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcE
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNV   89 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~v   89 (216)
                      |.+++|+|+ |+|.+|+.+|+++|++++||.+|++|+.+++|+|+.   .++.+.|++.|+ .+||.+
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHH-HhCCcc
Confidence            578899996 999999999999999999999999999999999984   489999999999 899976

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=5.1e-14  Score=100.83  Aligned_cols=71  Identities=18%  Similarity=0.323  Sum_probs=65.5

Q ss_pred             CCCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe---ecCCHHHHHHHHHhccCCcEEEcCC
Q 027936           23 DDGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELVPYLKEKLKRNVEVVPA   94 (216)
Q Consensus        23 ~~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~---G~vd~~~L~~~L~kk~G~~veiV~p   94 (216)
                      ...+.+++|.|. |||.+|+.+|+++|++++||.++.||+.+++|+|+   +.+++..|+++|+ ++||++.+..|
T Consensus         4 ~~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~GY~~~~~~~   78 (79)
T d1kvja_           4 SMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHNP   78 (79)
T ss_dssp             STTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECSC
T ss_pred             CCCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hcCCCcEeCCC
Confidence            456789999997 99999999999999999999999999999999998   4489999999999 99999998765

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.49  E-value=3.4e-14  Score=99.09  Aligned_cols=62  Identities=21%  Similarity=0.502  Sum_probs=58.2

Q ss_pred             EEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe---ecCCHHHHHHHHHhccCCcEEEc
Q 027936           30 VLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        30 ~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~---G~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .|+|. |||.+|+.+|+++|.+++||.+|.||+.+++|+|+   +.++++.|+++|+ .+||++++|
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hhCCCcEEC
Confidence            58996 99999999999999999999999999999999997   4589999999999 999999875

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=7.9e-14  Score=97.97  Aligned_cols=66  Identities=18%  Similarity=0.330  Sum_probs=60.9

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe---ecCCHHHHHHHHHhccCCcEEEc
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~---G~vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .++++|+|. |+|.+|+.+|+++|.+++||.+|.+|+.+++|+|.   +.+++..|+++|+ .+||.+.+.
T Consensus         2 t~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~a~l~   71 (72)
T d2aw0a_           2 TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS   71 (72)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSEEEEC
T ss_pred             cEEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hhCCCcEeC
Confidence            357899997 99999999999999999999999999999999997   4589999999999 999998764

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.47  E-value=5.2e-14  Score=99.18  Aligned_cols=65  Identities=25%  Similarity=0.338  Sum_probs=60.7

Q ss_pred             ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe---ecCCHHHHHHHHHhccCCcEEE
Q 027936           26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELVPYLKEKLKRNVEV   91 (216)
Q Consensus        26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~---G~vd~~~L~~~L~kk~G~~vei   91 (216)
                      -++++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++|+|+   +.++++.|+++|. .+||.+++
T Consensus         2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~a~v   70 (72)
T d1osda_           2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSV   70 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEE
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEe
Confidence            368999996 99999999999999999999999999999999997   4589999999999 99999886

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=6.5e-14  Score=101.69  Aligned_cols=72  Identities=22%  Similarity=0.351  Sum_probs=65.0

Q ss_pred             CCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe---ecCCHHHHHHHHHhccCCcEEEcCCCC
Q 027936           24 DGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELVPYLKEKLKRNVEVVPAKK   96 (216)
Q Consensus        24 ~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~---G~vd~~~L~~~L~kk~G~~veiV~p~k   96 (216)
                      .....+.|+|+ |+|.+|+.+|+++|.+++||.+|.||+.+++|+|+   ..++.+.|+++|+ .+||.+.++...+
T Consensus         6 ~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~-~~Gy~a~~~~~~k   81 (84)
T d1q8la_           6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQPK   81 (84)
T ss_dssp             SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCCTT
T ss_pred             CCCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHH-HhCCccEEcCCcc
Confidence            45678999997 99999999999999999999999999999999998   4589999999999 9999999875443

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.42  E-value=2e-13  Score=95.89  Aligned_cols=64  Identities=17%  Similarity=0.384  Sum_probs=59.3

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe---ecCCHHHHHHHHHhccCCcE
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELVPYLKEKLKRNV   89 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~---G~vd~~~L~~~L~kk~G~~v   89 (216)
                      ...+++|+|. |||.+|+.+|+++|.+++||.+|.+|+.+++++|+   +.+++..|+++|+ .+||.+
T Consensus         4 ~~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~-~~Gy~v   71 (72)
T d1p6ta1           4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV   71 (72)
T ss_dssp             CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-HhCCcc
Confidence            3468999997 99999999999999999999999999999999996   5689999999999 999976

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.40  E-value=3.1e-13  Score=96.67  Aligned_cols=67  Identities=24%  Similarity=0.403  Sum_probs=61.5

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe---ecCCHHHHHHHHHhccCCcEEEcCC
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELVPYLKEKLKRNVEVVPA   94 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~---G~vd~~~L~~~L~kk~G~~veiV~p   94 (216)
                      .+++|.|+ |+|.+|+.+|+++|..++||.+|.||+.+++|+|+   ..++...|+++|+ .+||.+.+...
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~   72 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE   72 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHH-HHCCceEECCc
Confidence            46899997 99999999999999999999999999999999997   3589999999999 99999988643

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.40  E-value=2.5e-13  Score=95.79  Aligned_cols=65  Identities=15%  Similarity=0.250  Sum_probs=58.7

Q ss_pred             eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec-CCHHHHHHHHHhccCCcEEEc
Q 027936           27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT-MDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~-vd~~~L~~~L~kk~G~~veiV   92 (216)
                      ++++|+|. |+|.+|+.+|+++|.+++||.+|.||+.+++|+|+.. ...+.|++.|. .+||++...
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~-~~GY~v~~~   69 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE   69 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCCCCBC
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHH-HcCCcccCC
Confidence            46899996 9999999999999999999999999999999999865 45789999999 999987643

>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein MTH889
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.36  E-value=0.63  Score=33.22  Aligned_cols=66  Identities=26%  Similarity=0.480  Sum_probs=50.5

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEE-----eCCCCeE--EEeec-CCHHHHHHHHHhccCCcEEEc
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDLV--TVKGT-MDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~v-----D~~t~kV--tV~G~-vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .+..++|-|- -|-. -.-.+-+.|.+++||..|.+     |..+..+  ||.|. +|-+.|.+.|+ ++|-.+..|
T Consensus         3 ~iRRlVLDVlKPh~P-~i~e~A~~l~~~~gV~~VnitV~EiD~et~~i~itiEG~~idyd~i~~~IE-~~Gg~IHSI   77 (93)
T d2raqa1           3 GLIRIVLDILKPHEP-IIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSV   77 (93)
T ss_dssp             SEEEEEEEEECCSCS-CHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEE
T ss_pred             ceEEEEEEeecCCCC-CHHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHH-HcCCeEEEE
Confidence            4677888885 3544 66788899999999887764     4455544  45676 99999999999 999888765

>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein AF1549
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.31  E-value=0.58  Score=33.30  Aligned_cols=66  Identities=20%  Similarity=0.303  Sum_probs=49.3

Q ss_pred             CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEE-----eCCCCeE--EEeec-CCHHHHHHHHHhccCCcEEEc
Q 027936           25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDLV--TVKGT-MDVKELVPYLKEKLKRNVEVV   92 (216)
Q Consensus        25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~v-----D~~t~kV--tV~G~-vd~~~L~~~L~kk~G~~veiV   92 (216)
                      .+..++|-|- -|-+ -.-.+-+.|.+++||..|.+     |..+..+  ||.|. +|-+.|.+.|+ ++|-.+..+
T Consensus         3 ~irRlVLDVlKPh~p-~~~~~A~~l~~~~gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE-~~Gg~IHSI   77 (91)
T d3bpda1           3 GLRRLVLDVLKPHEP-KTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSV   77 (91)
T ss_dssp             SEEEEEEEEEEESCS-CHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEE
T ss_pred             ceeEEEEEeecCCCC-CHHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHH-HcCCeEEEE
Confidence            4577888884 4555 44458888999999988764     4444444  45676 99999999999 999888765

>d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TM0487
species: Thermotoga maritima [TaxId: 2336]

Probab=85.27  E-value=0.37  Score=34.42  Aligned_cols=35  Identities=26%  Similarity=0.432  Sum_probs=26.8

Q ss_pred             EEEEEEeecchhH------HHHHHHHHhcCCCccEEEEeCC
Q 027936           28 TVVLKIRLHCEGC------ISKIKKIIYKTKGVDNVTIDGG   62 (216)
Q Consensus        28 tv~LKV~MhC~gC------a~kI~KaL~kl~GVesV~vD~~   62 (216)
                      .|.+.+.+++.+|      ..-|+++|.+++||.+|.|++.
T Consensus        42 ~V~v~~~lt~~~Cp~~~~i~~~i~~al~~~~gV~~v~V~i~   82 (102)
T d1uwda_          42 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT   82 (102)
T ss_dssp             EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred             ceEEEEecCCCCCchHHHHHHHHHHHHHcCCCCceEEEEEE
Confidence            4556666666666      5678999999999999999764

>d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TTHB138
species: Thermus thermophilus [TaxId: 274]

Probab=84.01  E-value=0.5  Score=32.83  Aligned_cols=35  Identities=17%  Similarity=0.460  Sum_probs=28.1

Q ss_pred             EEEEEEeecchhH------HHHHHHHHhcCCCccEEEEeCC
Q 027936           28 TVVLKIRLHCEGC------ISKIKKIIYKTKGVDNVTIDGG   62 (216)
Q Consensus        28 tv~LKV~MhC~gC------a~kI~KaL~kl~GVesV~vD~~   62 (216)
                      .+.+.+.+++.+|      .+.|+.+|..++||.+|.|++.
T Consensus        37 ~v~v~l~lt~~~cp~~~~i~~~i~~al~~l~gv~~V~V~~~   77 (91)
T d2cu6a1          37 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT   77 (91)
T ss_dssp             EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred             ccEEEEEcCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEEE
Confidence            4556666777777      5789999999999999998874