Citrus Sinensis ID: 027951

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
Protein Sequence
MSMASVSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPPPPTSLADSSENQAASNLLGNAHWLILLTWSLALVL
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHccccccccccHHccHcHcHHHcccccccccEEccccccccEEEEcccccccccccccccccccccEccccccccccccccccccccccccccccccccEEEEccccEEEcccccEEEEEcccccHHHcccccccccccccccccHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MSMASVSVIAFLAIFFVlqpltapsnflsplspllapafenvcdkvtcgkgkckasqnstFFYEcecdlgwkqntmavdqnlkflpciapdctlnqdcapspspaqeKAAKKNESIFDLCrwidcgggsckntsmFSYSCQCavdhynllntstfpcykecsigmdcknmgisvplppppppptsladsseNQAASNLLGNAHWLILLTWSLALVL
Flexible Loop (DISEMBL)
MSMASVSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPPPPTSLADSSENQAASNLLGNAHWLILLTWSLALVL
Low Complexity Region (SEG)
MSMASVSVIAFLAIFFVLQPLTapsnflsplspllapafENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVplpppppppTSLADSSENQAASNLLGNAHWLILLTWSLALVL
Disordered region (IsUnstruct)
*****VSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQ******************SIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGI********************************************
Disordered Region (DISOPRED)
*****VS*IAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMG*****************************NAHWLILLTWSLALVL
Disordered Region (DISEMBL)
MSMASVSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDC***************ESIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPP************QAASNLLGNAHWLILLTWSLALVL
Disordered Region (DISPRO)
*SMASVSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISV***********************LLGNAHWLILLTWSLALVL
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSMASVSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPPPPTSLADSSENQAASNLLGNAHWLILLTWSLALVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
356502862	213	PREDICTED: uncharacterized protein LOC10	0.953	0.967	0.549	2e-58
356536615	395	PREDICTED: uncharacterized protein LOC10	0.953	0.521	0.539	7e-58
224111120	214	predicted protein [Populus trichocarpa]	0.847	0.855	0.601	2e-57
255552065	240	conserved hypothetical protein [Ricinus	0.953	0.858	0.518	3e-54
297737101	212	unnamed protein product [Vitis vinifera]	0.972	0.990	0.5	6e-53
356535976	208	PREDICTED: uncharacterized protein LOC10	0.930	0.966	0.516	7e-53
359477359	225	PREDICTED: uncharacterized protein LOC10	0.870	0.835	0.515	1e-49
224099833	190	predicted protein [Populus trichocarpa]	0.851	0.968	0.553	4e-49
297800742	214	hypothetical protein ARALYDRAFT_493423 [	0.925	0.934	0.473	1e-46
79580566	212	uncharacterized protein [Arabidopsis tha	0.916	0.933	0.483	7e-42

>gi|356502862|ref|XP_003520234.1| PREDICTED: uncharacterized protein LOC100802013 [Glycine max]

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 116/211 (54%), Positives = 150/211 (71%), Gaps = 5/211 (2%)

Query: 3   MASVSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFF 62
           MA  SV+A +A F +LQPL+A S+ LSPL   L+P F++VC +V CGKG CK S+NSTFF
Sbjct: 1   MAFASVVAIVA-FLLLQPLSATSDLLSPL---LSPIFDDVCKEVECGKGTCKPSKNSTFF 56

Query: 63  YECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRW 122
           +ECEC  GWK+        LKFLPCI P+CTL+  C+ +P+P QEK+ K NESIFD C W
Sbjct: 57  FECECHPGWKRAPSNDKMGLKFLPCIVPNCTLDYSCSKAPAPVQEKSTKSNESIFDACHW 116

Query: 123 IDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPPP 182
           IDCGGGSC  TS FSYSC+C V + NLLN +TFPC++ECS+G+ C  +GISV       P
Sbjct: 117 IDCGGGSCNKTSKFSYSCECDVGYDNLLNVTTFPCFRECSLGLGCSELGISVKNSSTSAP 176

Query: 183 PTSLADSSENQAASNLLGNAHWLILLTWSLA 213
           PT L D+S+N+ +S L GN+  L++L   +A
Sbjct: 177 PT-LNDNSKNEGSSILQGNSLRLVMLIMFVA 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536615|ref|XP_003536832.1| PREDICTED: uncharacterized protein LOC100807319 [Glycine max]

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 115/213 (53%), Positives = 151/213 (70%), Gaps = 7/213 (3%)

Query: 3   MASVSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFF 62
           MA  SVIA +A F +LQPL+  S+FLSPL   L+P F++VC +V CGKG CK S+NSTF 
Sbjct: 1   MAFASVIAIVA-FLLLQPLSTTSDFLSPL---LSPIFDDVCKEVECGKGTCKPSKNSTFL 56

Query: 63  YECECDLGWKQNTMAVDQ--NLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLC 120
           +ECEC  GWKQ+    D   +LKFLPCI P+CTL+  C+ +P+P QEKA K NESIF  C
Sbjct: 57  FECECHQGWKQSLSNDDDESSLKFLPCIVPNCTLDYSCSKAPAPVQEKATKSNESIFYAC 116

Query: 121 RWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPP 180
            W+DCGGGSC  TSMFSY+C+C   +YNLLN + FPC++ECS+GM C  +GIS+      
Sbjct: 117 HWVDCGGGSCNKTSMFSYNCECDAGYYNLLNVTAFPCFRECSLGMGCSELGISMTNSSTS 176

Query: 181 PPPTSLADSSENQAASNLLGNAHWLILLTWSLA 213
            PP +L D+ +N+ +S L G++ WLI+L   +A
Sbjct: 177 TPP-ALNDNIKNEGSSILQGSSLWLIMLIMFVA 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111120|ref|XP_002315754.1| predicted protein [Populus trichocarpa] gi|222864794|gb|EEF01925.1| predicted protein [Populus trichocarpa]

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 116/193 (60%), Positives = 136/193 (70%), Gaps = 10/193 (5%)

Query: 3   MASVSVIA-FLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTF 61
           MA  S  A ++AI F+LQPL A S FLSPL   L+P F++VC KV CGKG CK S NST+
Sbjct: 1   MAYASTCATWVAILFLLQPLIARSGFLSPL---LSPVFDDVCKKVECGKGTCKPSDNSTW 57

Query: 62  FYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCR 121
           F+ECECD GWKQ +   D +LKFLPCI PDCTLN  C  +PSP QEKA K NESIFD C 
Sbjct: 58  FFECECDPGWKQTSSDHDDHLKFLPCIVPDCTLNSSCMAAPSPVQEKARKDNESIFDSCS 117

Query: 122 WIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPP 181
           W DCGGGSC  TS F+YSC CA  + NLLN S FPCYK+C+IGMDC+N+GISV       
Sbjct: 118 WTDCGGGSCNKTSTFTYSCACAEGYNNLLNASAFPCYKDCAIGMDCRNLGISV------S 171

Query: 182 PPTSLADSSENQA 194
             ++  D+S NQ 
Sbjct: 172 NKSASVDNSRNQG 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552065|ref|XP_002517077.1| conserved hypothetical protein [Ricinus communis] gi|223543712|gb|EEF45240.1| conserved hypothetical protein [Ricinus communis]

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 110/212 (51%), Positives = 137/212 (64%), Gaps = 6/212 (2%)

Query: 3   MASVSVIA-FLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTF 61
           M  VS IA  +A   VLQ + A S+FL+PL   L+P F++ C KV CGKG CKAS NS+F
Sbjct: 1   MVYVSFIACLVATLVVLQSMIATSDFLAPL---LSPIFDDACKKVECGKGTCKASSNSSF 57

Query: 62  FYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCR 121
           FYECECD GWKQ     D  LKFLPC+ P+CT++  C  +PSP Q+K++K N S+FD C 
Sbjct: 58  FYECECDPGWKQTRSDHDDTLKFLPCVVPNCTMDYSCVAAPSPIQDKSSKSNASVFDPCF 117

Query: 122 WIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPP 181
           W DCGGGSC  TS F+YSC+C   +YNLLN S FPC+KEC+IGMDC N+GIS+      P
Sbjct: 118 WTDCGGGSCNKTSPFTYSCECTEGYYNLLNISAFPCFKECAIGMDCSNLGISMSNRSASP 177

Query: 182 PPTSLADSSENQAASNLLGNAHWLILLTWSLA 213
            P  +   S NQ   +L    +     T  LA
Sbjct: 178 TP--VLTESSNQEEMDLRVALYSYSTFTSDLA 207

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737101|emb|CBI26302.3| unnamed protein product [Vitis vinifera]

 Score =  212 bits (540), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 107/214 (50%), Positives = 140/214 (65%), Gaps = 4/214 (1%)

Query: 3   MASVSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFF 62
           MAS +VI FL I   LQP T  S  LSPL   L+P F+ VC +V CGKG CK S +S  +
Sbjct: 1   MASANVIVFLTILLALQPTTTISEILSPL---LSPIFDEVCKEVECGKGTCKPSNDSPLY 57

Query: 63  YECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRW 122
           + CEC+ GW Q   A D +LKFLPC+ P+CTL+  C  +PSP QEK  + N S+FD CRW
Sbjct: 58  FACECNPGWMQTRPAHDDHLKFLPCVIPNCTLDYSCKEAPSPVQEKENRANLSLFDPCRW 117

Query: 123 IDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPPP 182
            DCGGGSC  TS F+++C+C   +YNLLN +TFPC +ECSIG+DC N+GI+         
Sbjct: 118 TDCGGGSCNKTSKFTHTCECREGYYNLLNITTFPCLRECSIGLDCLNLGITSSNKSTSST 177

Query: 183 PTSLADSSENQAASNLLGNAHWLILLTWSLALVL 216
             S+AD+ +NQA + L GN +  I+   S A+V+
Sbjct: 178 -PSMADNGKNQAKTILQGNFYLWIIFMLSWAMVM 210

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535976|ref|XP_003536517.1| PREDICTED: uncharacterized protein LOC100816071 [Glycine max]

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 110/213 (51%), Positives = 144/213 (67%), Gaps = 12/213 (5%)

Query: 3   MASVSVIAFLAIFFVLQPLTA-PSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTF 61
           MA  S IAFL    +L  L++  S+FLSPLSPL+AP +E+VC KV CGKG CK SQNST 
Sbjct: 1   MAFASAIAFL----LLHTLSSVRSDFLSPLSPLVAPLYEDVCKKVECGKGTCKPSQNSTL 56

Query: 62  FYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCR 121
            +EC C  GW+Q   A D+  KFLPCI P+CT++  C+ +P+PAQ++  K NESIFD C 
Sbjct: 57  LFECHCHPGWRQTLSAHDEGFKFLPCIVPNCTMDSSCSNAPAPAQQE-RKANESIFDACH 115

Query: 122 WIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPP 181
           W+DCGGGSC  TS+FSYSC C   +YNLLN +  PC++EC+IG  C N+GIS+       
Sbjct: 116 WVDCGGGSCNKTSLFSYSCNCDAGYYNLLNATALPCFRECAIGFGCSNLGISMTNSSTAS 175

Query: 182 PPTSLADSSENQAASNLL-GNAHWLILLTWSLA 213
           PP  L     N+ AS +L G++ WL++L   +A
Sbjct: 176 PPPPL-----NENASLILKGSSPWLLVLIIFIA 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477359|ref|XP_002279253.2| PREDICTED: uncharacterized protein LOC100263116 [Vitis vinifera]

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 99/192 (51%), Positives = 127/192 (66%), Gaps = 4/192 (2%)

Query: 3   MASVSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFF 62
           MAS +VI FL I   LQP T  S  LSPL   L+P F+ VC +V CGKG CK S +S  +
Sbjct: 1   MASANVIVFLTILLALQPTTTISEILSPL---LSPIFDEVCKEVECGKGTCKPSNDSPLY 57

Query: 63  YECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRW 122
           + CEC+ GW Q   A D +LKFLPC+ P+CTL+  C  +PSP QEK  + N S+FD CRW
Sbjct: 58  FACECNPGWMQTRPAHDDHLKFLPCVIPNCTLDYSCKEAPSPVQEKENRANLSLFDPCRW 117

Query: 123 IDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPPP 182
            DCGGGSC  TS F+++C+C   +YNLLN +TFPC +ECSIG+DC N+GI+         
Sbjct: 118 TDCGGGSCNKTSKFTHTCECREGYYNLLNITTFPCLRECSIGLDCLNLGITS-SNKSTSS 176

Query: 183 PTSLADSSENQA 194
             S+AD+ +NQ 
Sbjct: 177 TPSMADNGKNQG 188

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099833|ref|XP_002311637.1| predicted protein [Populus trichocarpa] gi|222851457|gb|EEE89004.1| predicted protein [Populus trichocarpa]

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 104/188 (55%), Positives = 130/188 (69%), Gaps = 4/188 (2%)

Query: 9   IAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECECD 68
           IA++AI F+ QPL A S+ LSPL   +   F++VC KV CGKG CK S NST+FYECECD
Sbjct: 5   IAWIAILFLSQPLIASSDLLSPLLSPI---FDDVCKKVECGKGTCKPSDNSTWFYECECD 61

Query: 69  LGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWIDCGGG 128
            GW Q     D +L+FLPC+ P+CT+N  C  +PSP QEKA++ N+SIFD C W DCGGG
Sbjct: 62  PGWTQTRFDQDDHLQFLPCVVPNCTVNFSCTAAPSPVQEKASRDNQSIFDPCFWADCGGG 121

Query: 129 SCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPPPPTSLAD 188
           SC  TS  +YSC CA  + NLLN STFPCYK+C+IGMDC N+GI +      P P  +A 
Sbjct: 122 SCNKTSQLTYSCACAEGYSNLLNVSTFPCYKDCAIGMDCSNLGIMMSNKSAAPTPV-MAG 180

Query: 189 SSENQAAS 196
           +S NQ  +
Sbjct: 181 NSMNQGEA 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800742|ref|XP_002868255.1| hypothetical protein ARALYDRAFT_493423 [Arabidopsis lyrata subsp. lyrata] gi|297314091|gb|EFH44514.1| hypothetical protein ARALYDRAFT_493423 [Arabidopsis lyrata subsp. lyrata]

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/211 (47%), Positives = 136/211 (64%), Gaps = 11/211 (5%)

Query: 7   SVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECE 66
           + +  +A   ++   TA  +FLSPL    AP ++N+C +V CGKGKCK+S N+TF YECE
Sbjct: 6   NTLCLVAALLLIYQKTATCDFLSPL---FAPMYDNICKEVECGKGKCKSSLNTTFMYECE 62

Query: 67  CDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNE--SIFDLCRWID 124
           CD GWKQ     DQ+LKFLPCI P+CT +  C  + SPAQ K   K+   S+FD C+W+D
Sbjct: 63  CDDGWKQ----FDQHLKFLPCITPNCTFDLTCGEAASPAQPKTPPKDNITSLFDACQWMD 118

Query: 125 CGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPPPPT 184
           CGGG C +T+ F YSC C   + NL+N +TFPC K+C++GMDC N+GI +       PP 
Sbjct: 119 CGGGFCNSTTAFQYSCNCHEGYSNLMNITTFPCLKQCALGMDCLNLGIPLSNTSSSSPP- 177

Query: 185 SLADSSENQAASNLLGNAHWLILLTWSLALV 215
           +L DSS+NQ   NL G++ W I     ++L 
Sbjct: 178 ALPDSSKNQGL-NLRGSSLWWITFMLCVSLA 207

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79580566|ref|NP_680687.2| uncharacterized protein [Arabidopsis thaliana] gi|332658093|gb|AEE83493.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  176 bits (445), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/209 (48%), Positives = 134/209 (64%), Gaps = 11/209 (5%)

Query: 7   SVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECE 66
           + +  +A   ++   TA S+FLSPL    AP ++N+C +V CGKGKCKA  N+TF YECE
Sbjct: 6   NTLCLVAALLLINQKTATSDFLSPL---FAPVYDNICKEVECGKGKCKAPSNTTFMYECE 62

Query: 67  CDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNE--SIFDLCRWID 124
           C+ GWKQ     DQ+LKFLPCI P+CT +  C  + SPAQ K   K+   S FD C+W+D
Sbjct: 63  CEDGWKQ----FDQHLKFLPCITPNCTFDLTCGEAASPAQPKPPPKDNITSFFDPCQWMD 118

Query: 125 CGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPPPPPT 184
           CGGG C ++  F YSC C   + NL+N +TFPC K+C++GMDC N+GI +        P 
Sbjct: 119 CGGGLCNSSMPFQYSCNCREGYSNLMNITTFPCLKQCALGMDCLNLGIPL-SNSSSSSPP 177

Query: 185 SLADSSENQAASNLLGNAHWLILLTWSLA 213
           +L DSS+NQ   NL G++ W I L  SLA
Sbjct: 178 ALPDSSKNQGL-NLRGSSLWWITLCVSLA 205

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
TAIR|locus:504955446	212	AT4G14746 "AT4G14746" [Arabido	0.777	0.792	0.505	6.2e-46

TAIR|locus:504955446 AT4G14746 "AT4G14746" [Arabidopsis thaliana (taxid:3702)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 89/176 (50%), Positives = 115/176 (65%)

Query:    40 ENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCA 99
             +N+C +V CGKGKCKA  N+TF YECEC+ GWKQ     DQ+LKFLPCI P+CT +  C 
Sbjct:    36 DNICKEVECGKGKCKAPSNTTFMYECECEDGWKQ----FDQHLKFLPCITPNCTFDLTCG 91

Query:   100 PSPSPAQEKAAKKNE--SIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPC 157
              + SPAQ K   K+   S FD C+W+DCGGG C ++  F YSC C   + NL+N +TFPC
Sbjct:    92 EAASPAQPKPPPKDNITSFFDPCQWMDCGGGLCNSSMPFQYSCNCREGYSNLMNITTFPC 151

Query:   158 YKECSIGMDCKNMGISVXXXXXXXXXTSLADSSENQAASNLLGNAHWLILLTWSLA 213
              K+C++GMDC N+GI +          +L DSS+NQ   NL G++ W I L  SLA
Sbjct:   152 LKQCALGMDCLNLGIPLSNSSSSSP-PALPDSSKNQGL-NLRGSSLWWITLCVSLA 205


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.132   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      216       190   0.00091  110 3  11 22  0.41    32
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  193 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.17u 0.17s 16.34t   Elapsed:  00:00:01
  Total cpu time:  16.17u 0.17s 16.34t   Elapsed:  00:00:01
  Start:  Tue May 21 02:56:40 2013   End:  Tue May 21 02:56:41 2013

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_X000758 hypothetical protein (214 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	216
KOG1219	4289	consensus Uncharacterized conserved protein, conta	99.32
KOG4289	2531	consensus Cadherin EGF LAG seven-pass G-type recep	98.84
KOG4289	2531	consensus Cadherin EGF LAG seven-pass G-type recep	98.28
KOG1219	4289	consensus Uncharacterized conserved protein, conta	98.11
KOG1214	1289	consensus Nidogen and related basement membrane pr	98.1
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.95
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.94
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.77
KOG1217	487	consensus Fibrillins and related proteins containi	97.68
KOG1217	487	consensus Fibrillins and related proteins containi	97.64
KOG1225	525	consensus Teneurin-1 and related extracellular mat	97.61
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.59
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.4
KOG1225	525	consensus Teneurin-1 and related extracellular mat	97.38
KOG4260	350	consensus Uncharacterized conserved protein [Funct	97.31
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.29
smart00181	35	EGF Epidermal growth factor-like domain.	97.16
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.11
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.92
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.88
smart00181	35	EGF Epidermal growth factor-like domain.	96.85
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	96.73
KOG1214	1289	consensus Nidogen and related basement membrane pr	96.47
KOG1226	783	consensus Integrin beta subunit (N-terminal portio	96.3
KOG1226	783	consensus Integrin beta subunit (N-terminal portio	96.3
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	96.21
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	95.83
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	95.79
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	95.73
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	95.44
PF12662	24	cEGF: Complement Clr-like EGF-like	95.34
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	94.74
PHA02887	126	EGF-like protein; Provisional	93.99
KOG4260	350	consensus Uncharacterized conserved protein [Funct	93.51
PHA02887	126	EGF-like protein; Provisional	92.24
PF12662	24	cEGF: Complement Clr-like EGF-like	91.27
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	90.41
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	89.03
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	89.02
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	85.97
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	84.71
smart00051	63	DSL delta serrate ligand.	84.2
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	84.19
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	83.13

>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]

Probab=99.32  E-value=1.7e-12  Score=138.66  Aligned_cols=103  Identities=23%  Similarity=0.475  Sum_probs=90.0

Q ss_pred             cCCCccCCCCCC-eeeccCCCCCcceeecCCCCccCccc-ccCCCccCCccCC-CCCC---CCCCCCCCCCcccccccCC
Q 027951           40 ENVCDKVTCGKG-KCKASQNSTFFYECECDLGWKQNTMA-VDQNLKFLPCIAP-DCTL---NQDCAPSPSPAQEKAAKKN  113 (216)
Q Consensus        40 ~~~C~~~~Cg~G-tC~~~~~~~~~Y~C~C~pGwtg~~c~-~~d~~~~lPC~ip-nCt~---n~sC~~~~~~~~~~~~~~n  113 (216)
                      .++|+..+|+|| +|..+.  ..+|.|+|.+-|+|.+|+ ++..|.+.||-.+ .|..   ++.|.|..++     |++.
T Consensus      3864 ~d~C~~npCqhgG~C~~~~--~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gy-----TG~~ 3936 (4289)
T KOG1219|consen 3864 TDPCNDNPCQHGGTCISQP--KGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGY-----TGKR 3936 (4289)
T ss_pred             ccccccCcccCCCEecCCC--CCceEEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCc-----cCce
Confidence            489999999985 999874  569999999999999999 5889999999987 7985   5899998888     5665


Q ss_pred             -C-CcCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          114 -E-SIFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       114 -~-s~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                       | +-+++|..+.|+ +|+|++.. ++|+|.|.+||.|++
T Consensus      3937 Ce~~Gi~eCs~n~C~~gg~C~n~~-gsf~CncT~g~~gr~ 3975 (4289)
T KOG1219|consen 3937 CEARGISECSKNVCGTGGQCINIP-GSFHCNCTPGILGRT 3975 (4289)
T ss_pred             eecccccccccccccCCceeeccC-CceEeccChhHhccc
Confidence             3 337999999999 88999975 799999999999987

>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms]

Probab=98.84  E-value=1.7e-09  Score=113.19  Aligned_cols=101  Identities=24%  Similarity=0.488  Sum_probs=84.5

Q ss_pred             ccccCCCccCCCCCC-eeeccCC-------------------CCCcceeecCCCCccCcccccCCCccCCccCCCCCCCC
Q 027951           37 PAFENVCDKVTCGKG-KCKASQN-------------------STFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQ   96 (216)
Q Consensus        37 ~~~~~~C~~~~Cg~G-tC~~~~~-------------------~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~   96 (216)
                      |+.|++|..+||-|= .|+...-                   ...+++|+|.|||||..|+                   
T Consensus      1176 pfdDniClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~Ce------------------- 1236 (2531)
T KOG4289|consen 1176 PFDDNICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDYCE------------------- 1236 (2531)
T ss_pred             eccCchhhcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCccccc-------------------
Confidence            778999999999974 8865321                   1348999999999999864                   


Q ss_pred             CCCCCCCCcccccccCCCCcCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC---CCCccccc-ccCCcccccccCC
Q 027951           97 DCAPSPSPAQEKAAKKNESIFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL---NTSTFPCY-KECSIGMDCKNMG  171 (216)
Q Consensus        97 sC~~~~~~~~~~~~~~n~s~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll---n~t~~pC~-~~CslG~dC~~lg  171 (216)
                                        ..+|.|+..+|+ +|+|+.-. ++|+|+|++||.|..   ...++-|+ .-|.-|.-|.+++
T Consensus      1237 ------------------TeiDlCYs~pC~nng~C~srE-ggYtCeCrpg~tGehCEvs~~agrCvpGvC~nggtC~~~~ 1297 (2531)
T KOG4289|consen 1237 ------------------TEIDLCYSGPCGNNGRCRSRE-GGYTCECRPGFTGEHCEVSARAGRCVPGVCKNGGTCVNLL 1297 (2531)
T ss_pred             ------------------chhHhhhcCCCCCCCceEEec-CceeEEecCCccccceeeecccCccccceecCCCEEeecC
Confidence                              235899999999 99999865 799999999999996   47789999 7799999999998


Q ss_pred             CcCC
Q 027951          172 ISVP  175 (216)
Q Consensus       172 i~~~  175 (216)
                      +...
T Consensus      1298 nggf 1301 (2531)
T KOG4289|consen 1298 NGGF 1301 (2531)
T ss_pred             CCce
Confidence            8753

>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms]

Probab=98.28  E-value=6.6e-07  Score=94.45  Aligned_cols=66  Identities=29%  Similarity=0.666  Sum_probs=53.6

Q ss_pred             CCccCCCC-CCeeeccCCCCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcCCCC
Q 027951           42 VCDKVTCG-KGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLC  120 (216)
Q Consensus        42 ~C~~~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~DPC  120 (216)
                      .|-+.+|+ ||+|...   .++|.|+|.|||+|.+|++.-                                   ...-|
T Consensus      1241 lCYs~pC~nng~C~sr---EggYtCeCrpg~tGehCEvs~-----------------------------------~agrC 1282 (2531)
T KOG4289|consen 1241 LCYSGPCGNNGRCRSR---EGGYTCECRPGFTGEHCEVSA-----------------------------------RAGRC 1282 (2531)
T ss_pred             hhhcCCCCCCCceEEe---cCceeEEecCCccccceeeec-----------------------------------ccCcc
Confidence            56677899 6899987   568999999999999976310                                   12357


Q ss_pred             CCCCcC-CCeeecCCCCceeeecCCC
Q 027951          121 RWIDCG-GGSCKNTSMFSYSCQCAVD  145 (216)
Q Consensus       121 ~~~~Cg-gGtCv~~~~~sY~C~C~~G  145 (216)
                      ...+|. +|+|++...++++|.|+.|
T Consensus      1283 vpGvC~nggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1283 VPGVCKNGGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred             ccceecCCCEEeecCCCceeccCCCc
Confidence            778888 8899998888999999998

>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]

Probab=98.11  E-value=3e-06  Score=92.56  Aligned_cols=85  Identities=20%  Similarity=0.397  Sum_probs=71.9

Q ss_pred             CCCccCCccCC-CCCC----CCCCCCCCCCcccccccCC-CCcCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCCC
Q 027951           80 QNLKFLPCIAP-DCTL----NQDCAPSPSPAQEKAAKKN-ESIFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLNT  152 (216)
Q Consensus        80 d~~~~lPC~ip-nCt~----n~sC~~~~~~~~~~~~~~n-~s~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~  152 (216)
                      +.|+.+||+|+ .|+-    .|.|.|.+-+     ++++ |....||..++|. ||+|+... ++|.|.|+.||+|....
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqy-----sG~~CEi~~epC~snPC~~GgtCip~~-n~f~CnC~~gyTG~~Ce 3938 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQY-----SGNHCEIDLEPCASNPCLTGGTCIPFY-NGFLCNCPNGYTGKRCE 3938 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccc-----cCcccccccccccCCCCCCCCEEEecC-CCeeEeCCCCccCceee
Confidence            67999999988 8986    5899997766     5777 8788999999999 99999864 78999999999999753


Q ss_pred             -C-ccccc-ccCCcccccccC
Q 027951          153 -S-TFPCY-KECSIGMDCKNM  170 (216)
Q Consensus       153 -t-~~pC~-~~CslG~dC~~l  170 (216)
                       . ...|- ..|.-|+-|.++
T Consensus      3939 ~~Gi~eCs~n~C~~gg~C~n~ 3959 (4289)
T KOG1219|consen 3939 ARGISECSKNVCGTGGQCINI 3959 (4289)
T ss_pred             cccccccccccccCCceeecc
Confidence             3 56788 668899999886

>KOG1214 consensus Nidogen and related basement membrane protein proteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=98.10  E-value=5.4e-06  Score=84.35  Aligned_cols=111  Identities=29%  Similarity=0.571  Sum_probs=80.1

Q ss_pred             CCCcc--CCCC-CCeeeccCCCCCcceeecCCCCc----cCccc-ccCCCccCCccCC--CCCC------------CCCC
Q 027951           41 NVCDK--VTCG-KGKCKASQNSTFFYECECDLGWK----QNTMA-VDQNLKFLPCIAP--DCTL------------NQDC   98 (216)
Q Consensus        41 ~~C~~--~~Cg-~GtC~~~~~~~~~Y~C~C~pGwt----g~~c~-~~d~~~~lPC~ip--nCt~------------n~sC   98 (216)
                      +.|++  ..|| +-.|+..   +.+|+|+|..||.    |..|. ..+.-+..||+.+  +|.+            .|+|
T Consensus       735 ~eca~~~~~CGp~s~Cin~---pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C  811 (1289)
T KOG1214|consen  735 NECATGFHRCGPNSVCINL---PGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSC  811 (1289)
T ss_pred             hhhccCCCCCCCCceeecC---CCceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEecCCceEEE
Confidence            34544  3477 5688765   7789999999985    33454 2444566788865  6765            2889


Q ss_pred             CCCCCCcccccccCC--CCcCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC------CCCccccccc
Q 027951           99 APSPSPAQEKAAKKN--ESIFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL------NTSTFPCYKE  160 (216)
Q Consensus        99 ~~~~~~~~~~~~~~n--~s~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll------n~t~~pC~~~  160 (216)
                      ++-|++     .++.  -.+.|+|....|. ..+|+++. ++|+|+|++||.|..      ....-+|-+|
T Consensus       812 ~CLPGf-----sGDG~~c~dvDeC~psrChp~A~Cyntp-gsfsC~C~pGy~GDGf~CVP~~~~~T~C~~e  876 (1289)
T KOG1214|consen  812 ACLPGF-----SGDGHQCTDVDECSPSRCHPAATCYNTP-GSFSCRCQPGYYGDGFQCVPDTSSLTPCEQE  876 (1289)
T ss_pred             eecCCc-----cCCccccccccccCccccCCCceEecCC-CcceeecccCccCCCceecCCCccCCccccc
Confidence            998888     3333  2356999999999 88999986 899999999999985      2455667655

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.95  E-value=4.3e-06  Score=52.35  Aligned_cols=31  Identities=26%  Similarity=0.610  Sum_probs=26.0

Q ss_pred             CCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          120 CRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       120 C~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      |..++|. +|+|+.....+|+|+|++||+|..
T Consensus         1 C~~~~C~n~g~C~~~~~~~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGGYTCECPPGYTGKR   32 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSEEEEEEBTTEESTT
T ss_pred             CCCCcCCCCeEEEeCCCCCEEeECCCCCccCC
Confidence            5667888 789999765799999999999963

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.94  E-value=5.2e-06  Score=51.95  Aligned_cols=31  Identities=29%  Similarity=0.699  Sum_probs=26.1

Q ss_pred             CccCCCCC-CeeeccCCCCCcceeecCCCCccCc
Q 027951           43 CDKVTCGK-GKCKASQNSTFFYECECDLGWKQNT   75 (216)
Q Consensus        43 C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~   75 (216)
                      |...+|.| |+|++..  ..+|+|+|.+||+|.+
T Consensus         1 C~~~~C~n~g~C~~~~--~~~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLP--GGGYTCECPPGYTGKR   32 (32)
T ss_dssp             TTTTSSTTTEEEEEES--TSEEEEEEBTTEESTT
T ss_pred             CCCCcCCCCeEEEeCC--CCCEEeECCCCCccCC
Confidence            66779997 6999984  3699999999999963

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.77  E-value=2e-05  Score=51.78  Aligned_cols=30  Identities=40%  Similarity=0.757  Sum_probs=26.1

Q ss_pred             CCCCCC--CCcC-CCeeecCCCCceeeecCCCCc
Q 027951          117 FDLCRW--IDCG-GGSCKNTSMFSYSCQCAVDHY  147 (216)
Q Consensus       117 ~DPC~~--~~Cg-gGtCv~~~~~sY~C~C~~Gy~  147 (216)
                      +|+|..  +.|. +++|+++. ++|+|.|++||.
T Consensus         2 idEC~~~~~~C~~~~~C~N~~-Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    2 IDECAEGPHNCPENGTCVNTE-GSYSCSCPPGYE   34 (42)
T ss_dssp             SSTTTTTSSSSSTTSEEEEET-TEEEEEESTTEE
T ss_pred             ccccCCCCCcCCCCCEEEcCC-CCEEeeCCCCcE
Confidence            578876  3698 88999986 899999999999

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1217 consensus Fibrillins and related proteins containing Ca2+-binding EGF-like domains [Signal transduction mechanisms]

Probab=97.68  E-value=0.00025  Score=63.77  Aligned_cols=102  Identities=25%  Similarity=0.522  Sum_probs=71.6

Q ss_pred             cCCCccCC-CCC-CeeeccCCCCCcceeecCCCCccCcc-c--ccCCC----ccCCccCC-CCCC-----CCCCCCCCCC
Q 027951           40 ENVCDKVT-CGK-GKCKASQNSTFFYECECDLGWKQNTM-A--VDQNL----KFLPCIAP-DCTL-----NQDCAPSPSP  104 (216)
Q Consensus        40 ~~~C~~~~-Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c-~--~~d~~----~~lPC~ip-nCt~-----n~sC~~~~~~  104 (216)
                      .+.|.... |.+ |+|+..   ...|+|+|.+||+|..+ .  +.++|    .-.+|..+ .|..     .+.|.+..++
T Consensus       271 ~~~C~~~~~c~~~~~C~~~---~~~~~C~C~~g~~g~~~~~~~~~~~C~~~~~~~~c~~g~~C~~~~~~~~~~C~c~~~~  347 (487)
T KOG1217|consen  271 VDSCALIASCPNGGTCVNV---PGSYRCTCPPGFTGRLCTECVDVDECSPRNAGGPCANGGTCNTLGSFGGFRCACGPGF  347 (487)
T ss_pred             ccccCCCCccCCCCeeecC---CCcceeeCCCCCCCCCCccccccccccccccCCcCCCCcccccCCCCCCCCcCCCCCC
Confidence            56788764 885 799987   33599999999999997 2  23455    34557665 6622     2456666653


Q ss_pred             cccccccCC-CCcCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCC
Q 027951          105 AQEKAAKKN-ESIFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       105 ~~~~~~~~n-~s~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                           +++. +...|.|....|. +|+|++...++|+|.|+.||.+.
T Consensus       348 -----~g~~C~~~~~~C~~~~~~~~~~c~~~~~~~~~c~~~~~~~~~  389 (487)
T KOG1217|consen  348 -----TGRRCEDSNDECASSPCCPGGTCVNETPGSYRCACPAGFAGK  389 (487)
T ss_pred             -----CCCccccCCccccCCccccCCEeccCCCCCeEecCCCccccC
Confidence                 3444 3222589988877 88999843378999999999985

>KOG1217 consensus Fibrillins and related proteins containing Ca2+-binding EGF-like domains [Signal transduction mechanisms]

Probab=97.64  E-value=0.00024  Score=63.79  Aligned_cols=121  Identities=24%  Similarity=0.479  Sum_probs=72.3

Q ss_pred             CCCc--cCCCCC-CeeeccCCCCCcceeecCCCCccCccccc---CCCc------------cCCccC---------CCCC
Q 027951           41 NVCD--KVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAVD---QNLK------------FLPCIA---------PDCT   93 (216)
Q Consensus        41 ~~C~--~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~---d~~~------------~lPC~i---------pnCt   93 (216)
                      +.|.  ...|.+ ++|+..   ..+|.|.|.+||++..++..   ..+.            ...|.+         ..|.
T Consensus       170 ~~C~~~~~~c~~~~~C~~~---~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~~~~~~~~~c~  246 (487)
T KOG1217|consen  170 DECIQYSSPCQNGGTCVNT---GGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECEVSIVECASGDGTCV  246 (487)
T ss_pred             cccccCCCCcCCCcccccC---CCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCCCcccccccccCCCCccc
Confidence            4676  335885 599887   44699999999999987532   0111            112222         1222


Q ss_pred             C---CCCCCCCCCCcccccccCCCCcCCCCCCCC-cC-CCeeecCCCCceeeecCCCCcCCCC--C-Cccccc-----cc
Q 027951           94 L---NQDCAPSPSPAQEKAAKKNESIFDLCRWID-CG-GGSCKNTSMFSYSCQCAVDHYNLLN--T-STFPCY-----KE  160 (216)
Q Consensus        94 ~---n~sC~~~~~~~~~~~~~~n~s~~DPC~~~~-Cg-gGtCv~~~~~sY~C~C~~Gy~nlln--~-t~~pC~-----~~  160 (216)
                      .   ++.|.+.+++.....  ....+.|.|.... |. +|+|++.. ++|.|+|++||.+...  . ....|.     ..
T Consensus       247 ~~~~~~~C~~~~g~~~~~~--~~~~~~~~C~~~~~c~~~~~C~~~~-~~~~C~C~~g~~g~~~~~~~~~~~C~~~~~~~~  323 (487)
T KOG1217|consen  247 NTVGSYTCRCPEGYTGDAC--VTCVDVDSCALIASCPNGGTCVNVP-GSYRCTCPPGFTGRLCTECVDVDECSPRNAGGP  323 (487)
T ss_pred             ccCCceeeeCCCCcccccc--ceeeeccccCCCCccCCCCeeecCC-CcceeeCCCCCCCCCCccccccccccccccCCc
Confidence            2   234554444421100  0112468899864 88 78999975 5699999999999996  1 224451     23


Q ss_pred             CCccccc
Q 027951          161 CSIGMDC  167 (216)
Q Consensus       161 CslG~dC  167 (216)
                      |..|..|
T Consensus       324 c~~g~~C  330 (487)
T KOG1217|consen  324 CANGGTC  330 (487)
T ss_pred             CCCCccc
Confidence            5566566

>KOG1225 consensus Teneurin-1 and related extracellular matrix proteins, contain EGF-like repeats [Signal transduction mechanisms; Extracellular structures]

Probab=97.61  E-value=0.00016  Score=70.72  Aligned_cols=94  Identities=24%  Similarity=0.555  Sum_probs=60.6

Q ss_pred             ccCCCccCCCCCC-----eeeccCCCCCcceeecCCCCccCcccccCCCccCCccC-CCCCCCCCCCCCCCCcccccccC
Q 027951           39 FENVCDKVTCGKG-----KCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIA-PDCTLNQDCAPSPSPAQEKAAKK  112 (216)
Q Consensus        39 ~~~~C~~~~Cg~G-----tC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~i-pnCt~n~sC~~~~~~~~~~~~~~  112 (216)
                      +...|....|.+|     .|++.       +|.|++||+|..|+. -.|+.. |.- ..|.++ .|.+.++|     .+.
T Consensus       243 ~g~~c~~~~C~~~c~~~g~c~~G-------~CIC~~Gf~G~dC~e-~~Cp~~-cs~~g~~~~g-~CiC~~g~-----~G~  307 (525)
T KOG1225|consen  243 FGPLCSTIYCPGGCTGRGQCVEG-------RCICPPGFTGDDCDE-LVCPVD-CSGGGVCVDG-ECICNPGY-----SGK  307 (525)
T ss_pred             eCCccccccCCCCCcccceEeCC-------eEeCCCCCcCCCCCc-ccCCcc-cCCCceecCC-EeecCCCc-----ccc
Confidence            3445666666644     68775       699999999998763 234444 542 244444 78888877     222


Q ss_pred             CCCcCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCCCCc
Q 027951          113 NESIFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLNTST  154 (216)
Q Consensus       113 n~s~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t~  154 (216)
                      .=+. --|- ..|. +|.|+++     +|+|.+||+|.+-.+.
T Consensus       308 dCs~-~~cp-adC~g~G~Ci~G-----~C~C~~Gy~G~~C~~~  343 (525)
T KOG1225|consen  308 DCSI-RRCP-ADCSGHGKCIDG-----ECLCDEGYTGELCIQR  343 (525)
T ss_pred             cccc-ccCC-ccCCCCCcccCC-----ceEeCCCCcCCccccc
Confidence            2010 1132 6676 8999943     6999999999997665

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.59  E-value=9e-05  Score=46.02  Aligned_cols=30  Identities=40%  Similarity=0.790  Sum_probs=25.6

Q ss_pred             CCCCCC-CCcC-CCeeecCCCCceeeecCCCCc
Q 027951          117 FDLCRW-IDCG-GGSCKNTSMFSYSCQCAVDHY  147 (216)
Q Consensus       117 ~DPC~~-~~Cg-gGtCv~~~~~sY~C~C~~Gy~  147 (216)
                      +|+|.. .+|. +|+|++.. ++|+|.|++||.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~-g~~~C~C~~g~~   33 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTV-GSYRCECPPGYT   33 (39)
T ss_pred             cccCcCCCCcCCCCEeECCC-CCeEeECCCCCc
Confidence            478887 7898 67999875 789999999998

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.40  E-value=0.00019  Score=44.49  Aligned_cols=33  Identities=27%  Similarity=0.727  Sum_probs=27.0

Q ss_pred             CCCcc-CCCCC-CeeeccCCCCCcceeecCCCCc-cCcc
Q 027951           41 NVCDK-VTCGK-GKCKASQNSTFFYECECDLGWK-QNTM   76 (216)
Q Consensus        41 ~~C~~-~~Cg~-GtC~~~~~~~~~Y~C~C~pGwt-g~~c   76 (216)
                      +.|.. .+|.+ |+|+..   ..+|+|.|.+||+ |.+|
T Consensus         3 ~~C~~~~~C~~~~~C~~~---~g~~~C~C~~g~~~g~~C   38 (39)
T smart00179        3 DECASGNPCQNGGTCVNT---VGSYRCECPPGYTDGRNC   38 (39)
T ss_pred             ccCcCCCCcCCCCEeECC---CCCeEeECCCCCccCCcC
Confidence            56877 68986 499987   5689999999999 8764

>KOG1225 consensus Teneurin-1 and related extracellular matrix proteins, contain EGF-like repeats [Signal transduction mechanisms; Extracellular structures]

Probab=97.38  E-value=0.00034  Score=68.47  Aligned_cols=67  Identities=24%  Similarity=0.572  Sum_probs=50.0

Q ss_pred             eeecCCCCccCcccccCCCccCCcc-CCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCCCcC-CCeeecCCCCceeee
Q 027951           64 ECECDLGWKQNTMAVDQNLKFLPCI-APDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWIDCG-GGSCKNTSMFSYSCQ  141 (216)
Q Consensus        64 ~C~C~pGwtg~~c~~~d~~~~lPC~-ipnCt~n~sC~~~~~~~~~~~~~~n~s~~DPC~~~~Cg-gGtCv~~~~~sY~C~  141 (216)
                      +|.|++||+|..|+ +..|+ -.|. +++|. +..|.+.++|.           -+.|....|. +|+|++    +  |.
T Consensus       297 ~CiC~~g~~G~dCs-~~~cp-adC~g~G~Ci-~G~C~C~~Gy~-----------G~~C~~~~C~~~g~cv~----g--C~  356 (525)
T KOG1225|consen  297 ECICNPGYSGKDCS-IRRCP-ADCSGHGKCI-DGECLCDEGYT-----------GELCIQRACSGGGQCVN----G--CK  356 (525)
T ss_pred             EeecCCCccccccc-cccCC-ccCCCCCccc-CCceEeCCCCc-----------CCcccccccCCCceecc----C--ce
Confidence            89999999999985 22233 3465 56787 67899999882           1456655587 778887    2  99


Q ss_pred             cCCCCcCCC
Q 027951          142 CAVDHYNLL  150 (216)
Q Consensus       142 C~~Gy~nll  150 (216)
                      |++||+|.-
T Consensus       357 C~~Gw~G~d  365 (525)
T KOG1225|consen  357 CKKGWRGPD  365 (525)
T ss_pred             eccCccCCC
Confidence            999999876

>KOG4260 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.31  E-value=0.00025  Score=64.90  Aligned_cols=99  Identities=17%  Similarity=0.335  Sum_probs=59.6

Q ss_pred             CCCC-CCeeeccCCCCCcceeecCCCCccCcccc--cCCC------ccCCcc---C---CCCCC--CCCCCC-CCCCccc
Q 027951           46 VTCG-KGKCKASQNSTFFYECECDLGWKQNTMAV--DQNL------KFLPCI---A---PDCTL--NQDCAP-SPSPAQE  107 (216)
Q Consensus        46 ~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~--~d~~------~~lPC~---i---pnCt~--n~sC~~-~~~~~~~  107 (216)
                      .+|. +|.|.-...-.++-.|+|++||+|+.|..  +.-+      +-+=|.   -   ..|+-  +.+|.. --+|+- 
T Consensus       150 r~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~~~Csg~~~k~C~kCkkGW~l-  228 (350)
T KOG4260|consen  150 RPCFGNGSCHGDGSREGSGKCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTACHEGCLGVCSGESSKGCSKCKKGWKL-  228 (350)
T ss_pred             CCcCCCCcccCCCCCCCCCcccccCCCCCccccccchHHHHhhcccccchhhhhhhhhhcccCCCCCCChhhhccccee-
Confidence            3565 89998644335678999999999999763  1111      111111   0   02221  122221 223311 


Q ss_pred             ccccCCCCcCCCCCC--CCcC-CCeeecCCCCceeeecCCCCcC
Q 027951          108 KAAKKNESIFDLCRW--IDCG-GGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       108 ~~~~~n~s~~DPC~~--~~Cg-gGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                        ....=.++|+|..  .+|+ +--|+|+. +||+|++++||.+
T Consensus       229 --de~gCvDvnEC~~ep~~c~~~qfCvNte-GSf~C~dk~Gy~~  269 (350)
T KOG4260|consen  229 --DEEGCVDVNECQNEPAPCKAHQFCVNTE-GSFKCEDKEGYKK  269 (350)
T ss_pred             --cccccccHHHHhcCCCCCChhheeecCC-CceEecccccccC
Confidence              1111135689975  5798 77899986 8999999999998

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.29  E-value=0.00033  Score=42.62  Aligned_cols=32  Identities=38%  Similarity=0.706  Sum_probs=26.6

Q ss_pred             CCCCCC-CCcC-CCeeecCCCCceeeecCCCCcCC
Q 027951          117 FDLCRW-IDCG-GGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       117 ~DPC~~-~~Cg-gGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      .|+|.. .+|. +|+|++.. ++|+|.|.+||.|.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~-~~~~C~C~~g~~g~   35 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTV-GSYRCSCPPGYTGR   35 (38)
T ss_pred             cccCCCCCCcCCCCEeECCC-CCeEeECCCCCcCC
Confidence            477887 6898 77999865 68999999999883

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>smart00181 EGF Epidermal growth factor-like domain

Probab=97.16  E-value=0.00052  Score=42.14  Aligned_cols=31  Identities=26%  Similarity=0.727  Sum_probs=25.3

Q ss_pred             Ccc-CCCCCCeeeccCCCCCcceeecCCCCcc-Ccc
Q 027951           43 CDK-VTCGKGKCKASQNSTFFYECECDLGWKQ-NTM   76 (216)
Q Consensus        43 C~~-~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg-~~c   76 (216)
                      |.. .+|.+|+|+..   ..+|+|.|.+||+| ..|
T Consensus         2 C~~~~~C~~~~C~~~---~~~~~C~C~~g~~g~~~C   34 (35)
T smart00181        2 CASGGPCSNGTCINT---PGSYTCSCPPGYTGDKRC   34 (35)
T ss_pred             CCCcCCCCCCEEECC---CCCeEeECCCCCccCCcc
Confidence            555 57888899987   56899999999999 653

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.11  E-value=0.00061  Score=41.41  Aligned_cols=33  Identities=24%  Similarity=0.674  Sum_probs=26.7

Q ss_pred             CCCcc-CCCC-CCeeeccCCCCCcceeecCCCCccCcc
Q 027951           41 NVCDK-VTCG-KGKCKASQNSTFFYECECDLGWKQNTM   76 (216)
Q Consensus        41 ~~C~~-~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c   76 (216)
                      +.|.. .+|. +|+|+..   ..+|+|+|.+||.|..|
T Consensus         3 ~~C~~~~~C~~~~~C~~~---~~~~~C~C~~g~~g~~C   37 (38)
T cd00054           3 DECASGNPCQNGGTCVNT---VGSYRCSCPPGYTGRNC   37 (38)
T ss_pred             ccCCCCCCcCCCCEeECC---CCCeEeECCCCCcCCcC
Confidence            56776 6898 4699977   56799999999999764

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.92  E-value=0.0013  Score=39.22  Aligned_cols=29  Identities=38%  Similarity=0.738  Sum_probs=23.8

Q ss_pred             CC-CCCcC-CCeeecCCCCceeeecCCCCcCC
Q 027951          120 CR-WIDCG-GGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       120 C~-~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      |. ...|. +++|++.. ++|+|.|++||.+.
T Consensus         2 C~~~~~C~~~~~C~~~~-~~~~C~C~~g~~g~   32 (36)
T cd00053           2 CAASNPCSNGGTCVNTP-GSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCCCCCEEecCC-CCeEeECCCCCccc
Confidence            44 56677 68999876 68999999999987

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.88  E-value=0.0014  Score=39.12  Aligned_cols=29  Identities=28%  Similarity=0.804  Sum_probs=23.6

Q ss_pred             Cc-cCCCCC-CeeeccCCCCCcceeecCCCCccC
Q 027951           43 CD-KVTCGK-GKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        43 C~-~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      |. ..+|.+ |+|+..   ..+|+|+|.+||.|.
T Consensus         2 C~~~~~C~~~~~C~~~---~~~~~C~C~~g~~g~   32 (36)
T cd00053           2 CAASNPCSNGGTCVNT---PGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCCCCCEEecC---CCCeEeECCCCCccc
Confidence            44 567875 899987   468999999999997

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.85  E-value=0.0015  Score=40.07  Aligned_cols=30  Identities=33%  Similarity=0.597  Sum_probs=23.9

Q ss_pred             CCCC-CCcCCCeeecCCCCceeeecCCCCcCC
Q 027951          119 LCRW-IDCGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       119 PC~~-~~CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      +|.. .+|.+++|++. .++|+|.|++||.+.
T Consensus         1 ~C~~~~~C~~~~C~~~-~~~~~C~C~~g~~g~   31 (35)
T smart00181        1 ECASGGPCSNGTCINT-PGSYTCSCPPGYTGD   31 (35)
T ss_pred             CCCCcCCCCCCEEECC-CCCeEeECCCCCccC
Confidence            3555 57885599987 479999999999985

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.73  E-value=0.0016  Score=41.09  Aligned_cols=25  Identities=28%  Similarity=0.763  Sum_probs=20.4

Q ss_pred             CCC-CCeeeccCCCCCcceeecCCCCccCcc
Q 027951           47 TCG-KGKCKASQNSTFFYECECDLGWKQNTM   76 (216)
Q Consensus        47 ~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c   76 (216)
                      .|. ||+|+..     ..+|+|++||+|+.|
T Consensus         7 ~C~~~G~C~~~-----~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSP-----CGRCVCDSGYTGPDC   32 (32)
T ss_pred             ccCCCCEEeCC-----CCEEECCCCCcCCCC
Confidence            466 8999864     478999999999863

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG1214 consensus Nidogen and related basement membrane protein proteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=96.47  E-value=0.01  Score=61.33  Aligned_cols=123  Identities=20%  Similarity=0.408  Sum_probs=74.3

Q ss_pred             CCccCCCCCC-eeeccCCCCCcceeecCCCCccC--cccccCCCccCCccCCCCCCCCCCCCCCCCcc-c-------ccc
Q 027951           42 VCDKVTCGKG-KCKASQNSTFFYECECDLGWKQN--TMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQ-E-------KAA  110 (216)
Q Consensus        42 ~C~~~~Cg~G-tC~~~~~~~~~Y~C~C~pGwtg~--~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~-~-------~~~  110 (216)
                      +|.+..|+-+ .|.++.  ...|.|+|..||.|.  .|.++++|..-+   ++|--+.-|.+.++--+ +       ...
T Consensus       696 y~gsh~cdt~a~C~pg~--~~~~tcecs~g~~gdgr~c~d~~eca~~~---~~CGp~s~Cin~pg~~rceC~~gy~F~dd  770 (1289)
T KOG1214|consen  696 YDGSHMCDTTARCHPGT--GVDYTCECSSGYQGDGRNCVDENECATGF---HRCGPNSVCINLPGSYRCECRSGYEFADD  770 (1289)
T ss_pred             eecCcccCCCccccCCC--CcceEEEEeeccCCCCCCCCChhhhccCC---CCCCCCceeecCCCceeEEEeecceeccC
Confidence            4566778865 888863  347999999999865  455566666522   34444333333222110 0       000


Q ss_pred             cCC-C-----CcCCCCCC--CCcC-CC--eeecCCCCceeeecCCCCcCCC--CCCccccc-ccCCccccccc
Q 027951          111 KKN-E-----SIFDLCRW--IDCG-GG--SCKNTSMFSYSCQCAVDHYNLL--NTSTFPCY-KECSIGMDCKN  169 (216)
Q Consensus       111 ~~n-~-----s~~DPC~~--~~Cg-gG--tCv~~~~~sY~C~C~~Gy~nll--n~t~~pC~-~~CslG~dC~~  169 (216)
                      +.+ .     -..++|..  +.|. .|  +|+-+.+++|+|.|-+||+|..  |...+.|- +-|.--+-|-+
T Consensus       771 ~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~~c~dvDeC~psrChp~A~Cyn  843 (1289)
T KOG1214|consen  771 RHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGHQCTDVDECSPSRCHPAATCYN  843 (1289)
T ss_pred             CcceEEecCCCCCCccccCccccCcCCceEEEecCCceEEEeecCCccCCccccccccccCccccCCCceEec
Confidence            001 0     01357764  5676 44  6777777789999999999875  66667776 55666666654

>KOG1226 consensus Integrin beta subunit (N-terminal portion of extracellular region) [Signal transduction mechanisms; Extracellular structures]

Probab=96.30  E-value=0.0075  Score=61.31  Aligned_cols=40  Identities=20%  Similarity=0.527  Sum_probs=24.9

Q ss_pred             CCcC-CCeeecCCCCceeeecCCC-CcCCCCCCcccccccCCccccc
Q 027951          123 IDCG-GGSCKNTSMFSYSCQCAVD-HYNLLNTSTFPCYKECSIGMDC  167 (216)
Q Consensus       123 ~~Cg-gGtCv~~~~~sY~C~C~~G-y~nlln~t~~pC~~~CslG~dC  167 (216)
                      ..|. +|+|+=+     +|+|.+. |+|.+-.--.-|...|..-.+|
T Consensus       594 ~iCSGrG~C~Cg-----~C~C~~~~~sG~~CE~cptc~~~C~~~~~C  635 (783)
T KOG1226|consen  594 QICSGRGTCECG-----RCKCTDPPYSGEFCEKCPTCPDPCAENKSC  635 (783)
T ss_pred             ceeCCCceeeCC-----ceEcCCCCcCcchhhcCCCCCCcccccccc
Confidence            3465 8899874     6999888 9998754433344334443333

>KOG1226 consensus Integrin beta subunit (N-terminal portion of extracellular region) [Signal transduction mechanisms; Extracellular structures]

Probab=96.30  E-value=0.0077  Score=61.24  Aligned_cols=89  Identities=27%  Similarity=0.481  Sum_probs=50.1

Q ss_pred             eeecCCCCccCcccc-cCCCcc----CCcc----CCCCCCCCCCC-----CCCCCcccccccCC-CCcCCCCCC---CCc
Q 027951           64 ECECDLGWKQNTMAV-DQNLKF----LPCI----APDCTLNQDCA-----PSPSPAQEKAAKKN-ESIFDLCRW---IDC  125 (216)
Q Consensus        64 ~C~C~pGwtg~~c~~-~d~~~~----lPC~----ipnCt~n~sC~-----~~~~~~~~~~~~~n-~s~~DPC~~---~~C  125 (216)
                      .|+|++||.|.+|+- .++...    --|.    .|.|+-.-.|.     +.+...+ +-+++- |-+.--|..   ..|
T Consensus       479 ~C~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~CGqC~C~~~~~~-~i~G~fCECDnfsC~r~~g~lC  557 (783)
T KOG1226|consen  479 QCRCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVCGQCVCHKPDNG-KIYGKFCECDNFSCERHKGVLC  557 (783)
T ss_pred             ceecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeCCceEecCCCCC-ceeeeeeeccCcccccccCccc
Confidence            699999999999983 333333    1232    12344433333     3333211 223333 322123443   358


Q ss_pred             C-CCeeecCCCCceeeecCCCCcCCCC---CCccccc
Q 027951          126 G-GGSCKNTSMFSYSCQCAVDHYNLLN---TSTFPCY  158 (216)
Q Consensus       126 g-gGtCv~~~~~sY~C~C~~Gy~nlln---~t~~pC~  158 (216)
                      + +|+|.=+     +|.|++||+|..-   .++.-|.
T Consensus       558 ~g~G~C~CG-----~CvC~~GwtG~~C~C~~std~C~  589 (783)
T KOG1226|consen  558 GGHGRCECG-----RCVCNPGWTGSACNCPLSTDTCE  589 (783)
T ss_pred             CCCCeEeCC-----cEEcCCCCccCCCCCCCCCcccc
Confidence            7 8999874     6999999999973   4445555

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=96.21  E-value=0.0018  Score=33.43  Aligned_cols=13  Identities=31%  Similarity=1.030  Sum_probs=10.4

Q ss_pred             eeecCCCCccCcc
Q 027951           64 ECECDLGWKQNTM   76 (216)
Q Consensus        64 ~C~C~pGwtg~~c   76 (216)
                      +|+|++||+|.+|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            5999999999874

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=95.83  E-value=0.01  Score=37.39  Aligned_cols=25  Identities=20%  Similarity=0.388  Sum_probs=20.6

Q ss_pred             CCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          123 IDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       123 ~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ..|. +|+|+..   .++|+|++||+|..
T Consensus         6 ~~C~~~G~C~~~---~g~C~C~~g~~G~~   31 (32)
T PF07974_consen    6 NICSGHGTCVSP---CGRCVCDSGYTGPD   31 (32)
T ss_pred             CccCCCCEEeCC---CCEEECCCCCcCCC
Confidence            4576 9999985   47999999999864

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=95.79  E-value=0.0073  Score=39.47  Aligned_cols=29  Identities=28%  Similarity=0.808  Sum_probs=24.0

Q ss_pred             CCCccC--CCC-CCeeeccCCCCCcceeecCCCCc
Q 027951           41 NVCDKV--TCG-KGKCKASQNSTFFYECECDLGWK   72 (216)
Q Consensus        41 ~~C~~~--~Cg-~GtC~~~~~~~~~Y~C~C~pGwt   72 (216)
                      +.|+..  .|. +++|+.+   .++|+|+|.+||+
T Consensus         3 dEC~~~~~~C~~~~~C~N~---~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    3 DECAEGPHNCPENGTCVNT---EGSYSCSCPPGYE   34 (42)
T ss_dssp             STTTTTSSSSSTTSEEEEE---TTEEEEEESTTEE
T ss_pred             cccCCCCCcCCCCCEEEcC---CCCEEeeCCCCcE
Confidence            466654  587 6799998   7799999999999

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=95.73  E-value=0.018  Score=47.44  Aligned_cols=38  Identities=18%  Similarity=0.398  Sum_probs=29.2

Q ss_pred             CCccC---CCCCCeeeccCCCCCcceeecCCCCccCcccccC
Q 027951           42 VCDKV---TCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQ   80 (216)
Q Consensus        42 ~C~~~---~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d   80 (216)
                      .|.+.   -|-||+|.--.+ ...+.|.|+.||+|.+|++.+
T Consensus        44 ~Cp~ey~~YClHG~C~yI~d-l~~~~CrC~~GYtGeRCEh~d   84 (139)
T PHA03099         44 LCGPEGDGYCLHGDCIHARD-IDGMYCRCSHGYTGIRCQHVV   84 (139)
T ss_pred             cCChhhCCEeECCEEEeecc-CCCceeECCCCccccccccee
Confidence            46543   499999976533 457999999999999988543

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=95.44  E-value=0.0077  Score=38.88  Aligned_cols=26  Identities=31%  Similarity=0.580  Sum_probs=19.6

Q ss_pred             CcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          124 DCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       124 ~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      .|. +.+|++.. ++|+|+|++||.|..
T Consensus         7 ~C~~nA~C~~~~-~~~~C~C~~Gy~GdG   33 (36)
T PF12947_consen    7 GCHPNATCTNTG-GSYTCTCKPGYEGDG   33 (36)
T ss_dssp             GS-TTCEEEE-T-TSEEEEE-CEEECCS
T ss_pred             CCCCCcEeecCC-CCEEeECCCCCccCC
Confidence            466 78999986 599999999999864

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=95.34  E-value=0.011  Score=35.24  Aligned_cols=13  Identities=31%  Similarity=0.938  Sum_probs=11.1

Q ss_pred             cceeecCCCCccC
Q 027951           62 FYECECDLGWKQN   74 (216)
Q Consensus        62 ~Y~C~C~pGwtg~   74 (216)
                      +|+|+|.+||+-.
T Consensus         1 sy~C~C~~Gy~l~   13 (24)
T PF12662_consen    1 SYTCSCPPGYQLS   13 (24)
T ss_pred             CEEeeCCCCCcCC
Confidence            5999999999843

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=94.74  E-value=0.0083  Score=52.18  Aligned_cols=31  Identities=23%  Similarity=0.481  Sum_probs=18.4

Q ss_pred             CCCCCCcC-CCeeecCCCCceeeecCCCCcCCCC
Q 027951          119 LCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       119 PC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      +|. ..|. +-.|.+.+ +-|+|.|++||.+-..
T Consensus       133 ~C~-LKCk~nE~CK~~~-~~Y~C~~~~~~~~~~~  164 (197)
T PF06247_consen  133 KCS-LKCKENEECKLVD-GYYKCVCKEGFPGDGE  164 (197)
T ss_dssp             -------TTTEEEEEET-TEEEEEE-TT-EEETT
T ss_pred             cee-eecCCCcceeeeC-cEEEeecCCCCCCCCC
Confidence            465 4566 55899876 6899999999987653

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PHA02887 EGF-like protein; Provisional

Probab=93.99  E-value=0.046  Score=44.47  Aligned_cols=36  Identities=19%  Similarity=0.356  Sum_probs=28.6

Q ss_pred             CCccC---CCCCCeeeccCCCCCcceeecCCCCccCcccc
Q 027951           42 VCDKV---TCGKGKCKASQNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        42 ~C~~~---~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      +|.+.   -|-||+|.-..+ ...+.|.|+.||+|.+|+.
T Consensus        85 pC~~eyk~YCiHG~C~yI~d-L~epsCrC~~GYtG~RCE~  123 (126)
T PHA02887         85 KCKNDFNDFCINGECMNIID-LDEKFCICNKGYTGIRCDE  123 (126)
T ss_pred             ccChHhhCEeeCCEEEcccc-CCCceeECCCCcccCCCCc
Confidence            67653   499999986543 4578999999999999874

>KOG4260 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.51  E-value=0.058  Score=49.79  Aligned_cols=74  Identities=23%  Similarity=0.422  Sum_probs=48.9

Q ss_pred             CCC-CCeeeccCCCCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCCCc
Q 027951           47 TCG-KGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWIDC  125 (216)
Q Consensus        47 ~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~DPC~~~~C  125 (216)
                      +|. +--|+.+   .++|+|++.+||++.    +|+|.+  |.                             |-|..   
T Consensus       245 ~c~~~qfCvNt---eGSf~C~dk~Gy~~g----~d~C~~--~~-----------------------------d~~~~---  283 (350)
T KOG4260|consen  245 PCKAHQFCVNT---EGSFKCEDKEGYKKG----VDECQF--CA-----------------------------DVCAS---  283 (350)
T ss_pred             CCChhheeecC---CCceEecccccccCC----hHHhhh--hh-----------------------------hhccc---
Confidence            465 4578876   668999999999983    233332  10                             12220   


Q ss_pred             CCCeeecCCCCceeeecCCCCcCCCCCCcccccccCCcccc
Q 027951          126 GGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMD  166 (216)
Q Consensus       126 ggGtCv~~~~~sY~C~C~~Gy~nlln~t~~pC~~~CslG~d  166 (216)
                      .++.|.+.+ ++|+|.|..|+    -...+.|+..+++-.-
T Consensus       284 kn~~c~ni~-~~~r~v~f~~~----~~~~g~cV~~~~p~~a  319 (350)
T KOG4260|consen  284 KNRPCMNID-GQYRCVCFSGL----IIIEGFCVWHGSPVLA  319 (350)
T ss_pred             CCCCcccCC-ccEEEEecccc----eeeeeeeeccCCchhh
Confidence            156788876 79999997763    3667889988875443

>PHA02887 EGF-like protein; Provisional

Probab=92.24  E-value=0.14  Score=41.65  Aligned_cols=36  Identities=22%  Similarity=0.417  Sum_probs=28.9

Q ss_pred             CcCCCCCC---CCcCCCeeecCC-CCceeeecCCCCcCCC
Q 027951          115 SIFDLCRW---IDCGGGSCKNTS-MFSYSCQCAVDHYNLL  150 (216)
Q Consensus       115 s~~DPC~~---~~CggGtCv~~~-~~sY~C~C~~Gy~nll  150 (216)
                      -.++||..   ++|-||+|.--. ...+.|.|.+||+|.-
T Consensus        81 ~hf~pC~~eyk~YCiHG~C~yI~dL~epsCrC~~GYtG~R  120 (126)
T PHA02887         81 MFFEKCKNDFNDFCINGECMNIIDLDEKFCICNKGYTGIR  120 (126)
T ss_pred             cCccccChHhhCEeeCCEEEccccCCCceeECCCCcccCC
Confidence            35789975   679999997643 4579999999999974

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=91.27  E-value=0.17  Score=30.15  Aligned_cols=14  Identities=29%  Similarity=0.524  Sum_probs=11.8

Q ss_pred             ceeeecCCCCcCCC
Q 027951          137 SYSCQCAVDHYNLL  150 (216)
Q Consensus       137 sY~C~C~~Gy~nll  150 (216)
                      ||+|+|++||.-..
T Consensus         1 sy~C~C~~Gy~l~~   14 (24)
T PF12662_consen    1 SYTCSCPPGYQLSP   14 (24)
T ss_pred             CEEeeCCCCCcCCC
Confidence            69999999998543

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=90.41  E-value=0.14  Score=32.93  Aligned_cols=24  Identities=25%  Similarity=0.793  Sum_probs=17.2

Q ss_pred             CC-CCeeeccCCCCCcceeecCCCCccC
Q 027951           48 CG-KGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        48 Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      |. +-+|+.+   ..+|+|+|++||+|.
T Consensus         8 C~~nA~C~~~---~~~~~C~C~~Gy~Gd   32 (36)
T PF12947_consen    8 CHPNATCTNT---GGSYTCTCKPGYEGD   32 (36)
T ss_dssp             S-TTCEEEE----TTSEEEEE-CEEECC
T ss_pred             CCCCcEeecC---CCCEEeECCCCCccC
Confidence            44 4589887   448999999999985

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=89.03  E-value=0.28  Score=31.66  Aligned_cols=22  Identities=32%  Similarity=0.486  Sum_probs=16.6

Q ss_pred             eeecCCCCceeeecCCCCcCCCC
Q 027951          129 SCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       129 tCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      .|++.. ++|+|.|++||.-.-|
T Consensus        11 ~C~~~~-g~~~C~C~~Gy~L~~D   32 (36)
T PF14670_consen   11 ICVNTP-GSYRCSCPPGYKLAED   32 (36)
T ss_dssp             EEEEET-TSEEEE-STTEEE-TT
T ss_pred             CCccCC-CceEeECCCCCEECcC
Confidence            799975 7899999999985543

...

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=89.02  E-value=0.46  Score=40.51  Aligned_cols=33  Identities=33%  Similarity=0.498  Sum_probs=24.1

Q ss_pred             CCCCCC--CCcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951          117 FDLCRW--IDCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       117 ~DPC~~--~~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      .|+|..  +.|.+ .|.++. ++|.|.|.+||....+
T Consensus       187 ~~~C~~~~~~c~~-~C~~~~-g~~~c~c~~g~~~~~~  221 (224)
T cd01475         187 PDLCATLSHVCQQ-VCISTP-GSYLCACTEGYALLED  221 (224)
T ss_pred             chhhcCCCCCccc-eEEcCC-CCEEeECCCCccCCCC
Confidence            467753  34553 799875 8999999999986543

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=85.97  E-value=0.41  Score=30.89  Aligned_cols=21  Identities=29%  Similarity=0.656  Sum_probs=16.2

Q ss_pred             eeeccCCCCCcceeecCCCCccCc
Q 027951           52 KCKASQNSTFFYECECDLGWKQNT   75 (216)
Q Consensus        52 tC~~~~~~~~~Y~C~C~pGwtg~~   75 (216)
                      .|++.   +.+|+|.|.+||+-..
T Consensus        11 ~C~~~---~g~~~C~C~~Gy~L~~   31 (36)
T PF14670_consen   11 ICVNT---PGSYRCSCPPGYKLAE   31 (36)
T ss_dssp             EEEEE---TTSEEEE-STTEEE-T
T ss_pred             CCccC---CCceEeECCCCCEECc
Confidence            78887   6689999999998753

...

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=84.71  E-value=0.96  Score=37.49  Aligned_cols=34  Identities=21%  Similarity=0.435  Sum_probs=25.9

Q ss_pred             CCCCCC---CCcCCCeeecC-CCCceeeecCCCCcCCC
Q 027951          117 FDLCRW---IDCGGGSCKNT-SMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       117 ~DPC~~---~~CggGtCv~~-~~~sY~C~C~~Gy~nll  150 (216)
                      +-+|..   ++|-||+|.-- +...|.|+|..||.|.-
T Consensus        42 i~~Cp~ey~~YClHG~C~yI~dl~~~~CrC~~GYtGeR   79 (139)
T PHA03099         42 IRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYTGIR   79 (139)
T ss_pred             cccCChhhCCEeECCEEEeeccCCCceeECCCCccccc
Confidence            446653   67999999753 24689999999999875

>smart00051 DSL delta serrate ligand

Probab=84.20  E-value=0.73  Score=33.09  Aligned_cols=13  Identities=23%  Similarity=0.429  Sum_probs=10.1

Q ss_pred             eeecCCCCccCcc
Q 027951           64 ECECDLGWKQNTM   76 (216)
Q Consensus        64 ~C~C~pGwtg~~c   76 (216)
                      .|.|.|||+|..|
T Consensus        51 ~~~C~~Gw~G~~C   63 (63)
T smart00051       51 NKGCLEGWMGPYC   63 (63)
T ss_pred             CEecCCCCcCCCC
Confidence            3559999999863

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=84.19  E-value=0.93  Score=34.80  Aligned_cols=30  Identities=30%  Similarity=0.527  Sum_probs=24.5

Q ss_pred             cCCCCCC-CCcC-CCeeecCCCCceeeecCCCCc
Q 027951          116 IFDLCRW-IDCG-GGSCKNTSMFSYSCQCAVDHY  147 (216)
Q Consensus       116 ~~DPC~~-~~Cg-gGtCv~~~~~sY~C~C~~Gy~  147 (216)
                      ..|+|+. ..|| .|.|..+  .+..|+|-+||.
T Consensus        76 p~d~Cd~y~~CG~~g~C~~~--~~~~C~Cl~GF~  107 (110)
T PF00954_consen   76 PKDQCDVYGFCGPNGICNSN--NSPKCSCLPGFE  107 (110)
T ss_pred             cccCCCCccccCCccEeCCC--CCCceECCCCcC
Confidence            3589996 6899 8999764  467899999996

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=83.13  E-value=0.47  Score=41.50  Aligned_cols=86  Identities=27%  Similarity=0.633  Sum_probs=48.0

Q ss_pred             CCC-CeeeccCC--CCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCCC
Q 027951           48 CGK-GKCKASQN--STFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWID  124 (216)
Q Consensus        48 Cg~-GtC~~~~~--~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~DPC~~~~  124 (216)
                      |+. ++|....+  ....|+|+|-+||.-..-.         |+                            .+.|....
T Consensus        52 Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~v---------Cv----------------------------p~~C~~~~   94 (197)
T PF06247_consen   52 CGDYAKCINQANKGEERAYKCDCINGYILKQGV---------CV----------------------------PNKCNNKD   94 (197)
T ss_dssp             EETTEEEEE-SSTTSSTSEEEEE-TTEEESSSS---------EE----------------------------EGGGSS--
T ss_pred             ccchhhhhcCCCcccceeEEEecccCceeeCCe---------Ec----------------------------hhhcCcee
Confidence            665 79987653  3468999999999877521         32                            14688889


Q ss_pred             cCCCeeecCC--CCceeeecCCCCc-CCCC----CCcccccccCCcccccccC
Q 027951          125 CGGGSCKNTS--MFSYSCQCAVDHY-NLLN----TSTFPCYKECSIGMDCKNM  170 (216)
Q Consensus       125 CggGtCv~~~--~~sY~C~C~~Gy~-nlln----~t~~pC~~~CslG~dC~~l  170 (216)
                      ||.|.|+-..  ...+.|.|+=|+. ...+    .-.-+|.=.|.-...|...
T Consensus        95 Cg~GKCI~d~~~~~~~~CSC~IGkV~~dn~kCtk~G~T~C~LKCk~nE~CK~~  147 (197)
T PF06247_consen   95 CGSGKCILDPDNPNNPTCSCNIGKVPDDNKKCTKTGETKCSLKCKENEECKLV  147 (197)
T ss_dssp             -TTEEEEEEEGGGSEEEEEE-TEEETTTTTESEEEE--------TTTEEEEEE
T ss_pred             cCCCeEEecCCCCCCceeEeeeceEeccCCcccCCCccceeeecCCCcceeee
Confidence            9999998643  2367999999999 1111    1113455455556666554

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	216
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.6
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.59
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.48
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.32
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.29
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.28
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.25
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.25
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.24
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.23
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.21
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.19
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.15
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.12
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.01
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.01
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.01
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.99
2vh0_B	134	Activated factor XA light chain; serine protease,	98.95
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.94
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.92
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.88
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.86
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.84
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.78
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.76
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.73
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.71
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	98.65
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.62
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	98.43
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.41
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.41
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.35
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	98.33
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.25
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.24
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.22
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.19
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.13
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.12
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	98.12
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.08
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.02
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.01
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.01
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.98
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.93
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.89
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.86
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.85
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	97.81
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.75
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	97.74
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	97.74
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	97.72
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	97.69
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.69
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.58
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.58
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.55
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	97.52
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	97.51
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	97.47
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.42
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.41
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.36
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.34
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.33
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.31
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	97.25
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	97.24
1aut_L	114	Activated protein C; serine proteinase, plasma cal	97.19
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	97.17
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.13
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	97.11
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.0
2vh0_B	134	Activated factor XA light chain; serine protease,	97.0
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.97
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	96.97
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	96.93
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	96.91
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	96.9
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	96.89
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	96.8
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.7
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	96.64
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.56
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	96.52
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	96.48
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.42
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	96.39
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	96.38
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	96.35
1ob1_C	99	Major merozoite surface protein; immune system, im	96.31
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	96.15
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	96.13
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.11
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.1
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	96.01
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	96.0
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	95.92
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	95.73
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	95.69
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	95.62
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.6
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.59
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	95.59
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	95.49
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	95.48
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	95.34
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	95.3
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	95.21
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	94.96
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	94.91
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	94.48
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	94.2
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	93.86
1szb_A	170	Mannose binding lectin-associated serine protease-	93.69
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	93.6
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	93.57
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	93.44
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	93.42
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	93.4
2wph_E	59	Coagulation factor IXA light chain; serine proteas	93.18
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	93.16
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	93.03
1szb_A	170	Mannose binding lectin-associated serine protease-	92.76
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	91.61
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	91.58
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	91.5
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	91.11
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	90.99
1nzi_A	159	Complement C1S component; calcium, innate immunity	90.22
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	89.51
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	88.69
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	88.33
1nzi_A	159	Complement C1S component; calcium, innate immunity	88.08
2wph_E	59	Coagulation factor IXA light chain; serine proteas	87.59
1ob1_C	99	Major merozoite surface protein; immune system, im	87.12
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	84.68
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	84.02
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	83.35

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.60  E-value=9.6e-16  Score=119.82  Aligned_cols=104  Identities=21%  Similarity=0.491  Sum_probs=79.3

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccc-------------cCCCccCCccCC-CCC----------CC
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAV-------------DQNLKFLPCIAP-DCT----------LN   95 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~-------------~d~~~~lPC~ip-nCt----------~n   95 (216)
                      |.|+..+|.+ |+|++... ..+|+|+|.+||+|..|+.             +++|...||.+. .|.          ..
T Consensus         1 d~C~~~pC~~~g~C~~~~~-~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~   79 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLA-DGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIG   79 (143)
T ss_dssp             --CCSCCCGGGCEEEC------CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECC
T ss_pred             CcCCCCcCCCCCEeeCCCC-CCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCC
Confidence            4788999985 79998632 2579999999999999874             356777788754 676          25


Q ss_pred             CCCCCCCCCcccccccCC-CCcCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCC
Q 027951           96 QDCAPSPSPAQEKAAKKN-ESIFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus        96 ~sC~~~~~~~~~~~~~~n-~s~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      |.|.+.++|     ++.+ +.++|+|..++|. +|+|++.. ++|+|+|++||+|..-
T Consensus        80 ~~C~C~~G~-----~G~~C~~~i~~C~~~~C~~~~~C~~~~-g~~~C~C~~G~~G~~c  131 (143)
T 4d90_A           80 YVCKCPRGF-----NGIHCQHNINECEVEPCKNGGICTDLV-ANYSCECPGEFMGRNC  131 (143)
T ss_dssp             EEEECCTTE-----ESTTSCEECCTTTTCCSCTTCEEEEET-TEEEEECCTTCBSTTS
T ss_pred             eEeECcCCC-----cCCCcccCCCcCCCCCCCCCCEeECCC-CCeEeECCCCCccCCc
Confidence            788888888     4555 5467999999998 78999875 7999999999999753

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.59  E-value=1.2e-15  Score=119.71  Aligned_cols=103  Identities=22%  Similarity=0.449  Sum_probs=85.6

Q ss_pred             cCCCc--cCCCCC-CeeeccCCCCCcceeecCCCCccCccc-ccCCCccCCccCC-CCCC---CCCCCCCCCCccccccc
Q 027951           40 ENVCD--KVTCGK-GKCKASQNSTFFYECECDLGWKQNTMA-VDQNLKFLPCIAP-DCTL---NQDCAPSPSPAQEKAAK  111 (216)
Q Consensus        40 ~~~C~--~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~-~~d~~~~lPC~ip-nCt~---n~sC~~~~~~~~~~~~~  111 (216)
                      .+.|.  ..+|.+ |+|+..   ..+|+|+|.+||+|.+|+ ++++|...||... .|..   .|.|.+.++|     ++
T Consensus         5 ideC~~~~~~C~~~g~C~~~---~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~-----~G   76 (135)
T 2vj3_A            5 VDECSLGANPCEHAGKCINT---LGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGY-----EG   76 (135)
T ss_dssp             CCTTTSSSCSSSTTCEEEEC---SSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTE-----ES
T ss_pred             cccccCCCCCCCCCCEeECC---CCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCC-----cC
Confidence            46787  678985 799987   568999999999999997 5889999999854 7875   4789998888     35


Q ss_pred             CC-CCcCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCC
Q 027951          112 KN-ESIFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       112 ~n-~s~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      .+ +...|+|...+|. +|+|++.. ++|+|+|++||+|..-
T Consensus        77 ~~C~~~~~~C~~~~C~~~g~C~~~~-g~~~C~C~~G~~G~~C  117 (135)
T 2vj3_A           77 VHCEVNTDECASSPCLHNGRCLDKI-NEFQCECPTGFTGHLC  117 (135)
T ss_dssp             SSSCEECCTTTTCCSTTTCEEEECS-SCEEEECCTTEESSSS
T ss_pred             CcceecCCcccCCCcCCCCEeECCC-CCeEEECCCCCcCCcc
Confidence            55 5457999999998 78999975 7899999999999753

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.48  E-value=1.5e-15  Score=124.40  Aligned_cols=120  Identities=21%  Similarity=0.455  Sum_probs=92.1

Q ss_pred             CCccCCCCCCeeeccCCCCCcceeecCCCCccC---cccccCCCc----cCCccCC-CCCC--------CCCCCCCCCCc
Q 027951           42 VCDKVTCGKGKCKASQNSTFFYECECDLGWKQN---TMAVDQNLK----FLPCIAP-DCTL--------NQDCAPSPSPA  105 (216)
Q Consensus        42 ~C~~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~---~c~~~d~~~----~lPC~ip-nCt~--------n~sC~~~~~~~  105 (216)
                      .+...+|+||+|++.   ..+|+|+|.+||+|.   .|+++++|.    ..||.+. .|+.        .|.|.+.++|.
T Consensus         7 ~~~~~pC~ng~C~~~---~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~   83 (186)
T 1z1y_A            7 VTVDTICXNGQLVQM---SNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYT   83 (186)
T ss_dssp             CCTTCCCBTEEEEEC---SSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEE
T ss_pred             cCCCCCCCCCEeECC---CCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCc
Confidence            456778999999987   568999999999988   788889998    7899864 7864        35799988883


Q ss_pred             ccccccCC-CCcCCCCCCCCcC-CCeee----cCCCCceeeecCCCCcCC-----CCCC--cccccccC-CcccccccC
Q 027951          106 QEKAAKKN-ESIFDLCRWIDCG-GGSCK----NTSMFSYSCQCAVDHYNL-----LNTS--TFPCYKEC-SIGMDCKNM  170 (216)
Q Consensus       106 ~~~~~~~n-~s~~DPC~~~~Cg-gGtCv----~~~~~sY~C~C~~Gy~nl-----ln~t--~~pC~~~C-slG~dC~~l  170 (216)
                           +.+ +-..|+|...+|+ +|+|+    +. .++|+|.|++||+|.     .-..  ..+|...| .-++.|.+.
T Consensus        84 -----g~~~~C~~d~C~~~~C~~~g~C~~~~~~~-~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~  156 (186)
T 1z1y_A           84 -----LXEDTCVLDVCQYXNCGESGECIVEYLSE-IQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNV  156 (186)
T ss_dssp             -----EETTEEEEGGGTTCCCCTTEEEEEEEETT-EEEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEE
T ss_pred             -----cCCCCCCCCcCcCCCCCCCCEEeeCCcCC-CCCceEECCCCCcccCCCCCcceEcCCCcccccccccCcceecC
Confidence                 222 2125899999999 88999    54 368999999999983     2222  35777778 777777664

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.32  E-value=1.3e-12  Score=95.04  Aligned_cols=70  Identities=29%  Similarity=0.615  Sum_probs=56.3

Q ss_pred             cCCCcc-CCCCCCeeeccCCCCCcceeecCCCCc--cCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCc
Q 027951           40 ENVCDK-VTCGKGKCKASQNSTFFYECECDLGWK--QNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESI  116 (216)
Q Consensus        40 ~~~C~~-~~Cg~GtC~~~~~~~~~Y~C~C~pGwt--g~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~  116 (216)
                      -+.|.. .+|.+|+|++.   ..+|+|+|.+||+  |..|+                                      +
T Consensus         5 ideC~~~~~C~~g~C~n~---~g~y~C~C~~Gy~~~g~~C~--------------------------------------d   43 (82)
T 1emn_A            5 MDECKEPDVCKHGQCINT---DGSYRCECPFGYILAGNECV--------------------------------------D   43 (82)
T ss_dssp             CCSSSSTTSCSSSEECCC---SSCCCEECCTTEEEETTEEE--------------------------------------E
T ss_pred             cccCCCCCCcCCCEEEec---CCCEEEECCCCeECCCCccC--------------------------------------C
Confidence            467886 78999999987   6689999999998  66653                                      2


Q ss_pred             CCCCC-CCCcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951          117 FDLCR-WIDCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       117 ~DPC~-~~~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      +|+|. .++|.+|+|++.. ++|+|.|++||.+..+
T Consensus        44 ideC~~~~~C~~~~C~n~~-g~y~C~C~~G~~g~~~   78 (82)
T 1emn_A           44 TDECSVGNPCGNGTCKNVI-GGFECTCEEGFEPGPM   78 (82)
T ss_dssp             CCGGGTCCTTSSSCEEECS-SSEEECCSSSSCCCSS
T ss_pred             cccccCCCCCCCCEeECCC-CCEEeECCCCeEeCCC
Confidence            35665 4678778999975 7999999999998664

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.29  E-value=1.4e-12  Score=95.43  Aligned_cols=70  Identities=34%  Similarity=0.765  Sum_probs=55.1

Q ss_pred             CCCccCC--CCCCeeeccCCCCCcceeecCCCCcc-----CcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCC
Q 027951           41 NVCDKVT--CGKGKCKASQNSTFFYECECDLGWKQ-----NTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKN  113 (216)
Q Consensus        41 ~~C~~~~--Cg~GtC~~~~~~~~~Y~C~C~pGwtg-----~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n  113 (216)
                      +.|+..+  |.+|+|+.+   ..+|+|.|.+||++     ..|+                                    
T Consensus         4 deC~~~~~~C~~g~C~n~---~g~y~C~C~~Gy~~~~~~g~~C~------------------------------------   44 (86)
T 1lmj_A            4 DECRISPDLCGRGQCVNT---PGDFECKCDEGYESGFMMMKNCM------------------------------------   44 (86)
T ss_dssp             CTTTTCSSTTTTSCEEEE---TTEEEECCCSSEEECTTTSSSEE------------------------------------
T ss_pred             ccccCCCCCCCCCEEECC---CCCEEeeCCCCcCccCCCCCccC------------------------------------
Confidence            5788766  999999998   66999999999994     3332                                    


Q ss_pred             CCcCCCCCCCC--cCCCeeecCCCCceeeecCCCCcCCCCC
Q 027951          114 ESIFDLCRWID--CGGGSCKNTSMFSYSCQCAVDHYNLLNT  152 (216)
Q Consensus       114 ~s~~DPC~~~~--CggGtCv~~~~~sY~C~C~~Gy~nlln~  152 (216)
                        ++|+|...+  |.+|+|++.. ++|+|+|++||.+..+.
T Consensus        45 --dideC~~~~~~C~~~~C~n~~-g~y~C~C~~G~~~~~~~   82 (86)
T 1lmj_A           45 --DIDECQRDPLLCRGGVCHNTE-GSYRCECPPGHQLSPNI   82 (86)
T ss_dssp             --ECCHHHHCSSTTTTSEEEEET-TEEEEESCTTSCCCSSS
T ss_pred             --CcccccCCCCcCCCCEeEcCC-CCEEEECcCCcccCCCC
Confidence              246676544  6678999975 89999999999987654

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.28  E-value=1e-12  Score=103.97  Aligned_cols=105  Identities=25%  Similarity=0.416  Sum_probs=70.6

Q ss_pred             cCCCccCCCCCCeeeccCCCCCcceeecCCCCccCc----ccc------------------cCCCcc-CCccC-------
Q 027951           40 ENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNT----MAV------------------DQNLKF-LPCIA-------   89 (216)
Q Consensus        40 ~~~C~~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~----c~~------------------~d~~~~-lPC~i-------   89 (216)
                      .|.|+..+|.||+|++.   ..+|+|+|.+||+|..    |.+                  ++++.. ..|..       
T Consensus         4 ideC~~~pC~ng~C~n~---~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g   80 (147)
T 2w86_A            4 IDECESSPCINGVCKNS---PGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWG   80 (147)
T ss_dssp             CCGGGGCCSBTSEEEEE---TTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEET
T ss_pred             CccCcCCCCCCCEeECC---CCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccC
Confidence            46899999999999987   6799999999999753    221                  111100 00100       


Q ss_pred             CCCCC-CCCCCCCCCCcccccccCC-CCcCCCCCCC--CcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951           90 PDCTL-NQDCAPSPSPAQEKAAKKN-ESIFDLCRWI--DCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus        90 pnCt~-n~sC~~~~~~~~~~~~~~n-~s~~DPC~~~--~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      ..|+. .|.|.+.++|..  ..+++ + ++|+|...  .|.+|+|++.. ++|+|.|++||++..+
T Consensus        81 ~~C~~c~~~C~C~~Gy~~--~~g~~C~-dideC~~~~~~C~~g~C~n~~-g~y~C~C~~Gy~g~~~  142 (147)
T 2w86_A           81 SPCTLCQVDPICGKGYSR--IKGTQCE-DIDECEVFPGVCKNGLCVNTR-GSFKCQCPSGMTLDAT  142 (147)
T ss_dssp             TTTEECCCCTTTCTTEEE--EETTEEE-ECCHHHHSTTCSSSSEEEEET-TEEEEECCTTCCBCTT
T ss_pred             CCcccCCCcccCCCcccc--CCCCccC-ccccccCCCCCCCCCEEECCC-CCEEeeCCCCCccCCC
Confidence            01111 266778888732  12444 4 57999854  49988999975 8999999999998764

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.25  E-value=1.2e-12  Score=101.05  Aligned_cols=103  Identities=19%  Similarity=0.377  Sum_probs=75.3

Q ss_pred             cCCCccCCCCCCeeeccCCCCCcceeecCCCCccCcccccC----CCccCCccCCCCCC--CCCCCCCCCCcccccccCC
Q 027951           40 ENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQ----NLKFLPCIAPDCTL--NQDCAPSPSPAQEKAAKKN  113 (216)
Q Consensus        40 ~~~C~~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d----~~~~lPC~ipnCt~--n~sC~~~~~~~~~~~~~~n  113 (216)
                      .|.|...+|++ +|++..  ..+|+|+|.+||+|..++ ++    +|...||. ..|..  .|.|.+.++|.-..  ++.
T Consensus         4 ideC~~~pC~~-~C~~~~--~g~y~C~C~~Gy~g~~~~-~~~C~~~C~~~~C~-~~C~~~~~y~C~C~~Gy~~~~--g~~   76 (118)
T 1dx5_I            4 VDPCFRANCEY-QCQPLD--QTSYLCVCAEGFAPIPHE-PHRCQMFCNQTACP-ADCDPNTQASCECPEGYILDD--GFI   76 (118)
T ss_dssp             CCGGGGCCCSS-EEEECS--SSCEEEECCTTEEEETTE-EEEEEECCCSSEEE-CEECTTSTTCEECCTTEEEET--TTE
T ss_pred             cccCCCCCCCC-CCCCCC--CCCEEeECCCCccccCCC-CCccccccCCCCCC-CcccCCCCeEeECCCCccCCC--CCc
Confidence            36899999996 999872  358999999999998532 22    33455565 44544  58899998884211  333


Q ss_pred             CCcCCCCCC-CCcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951          114 ESIFDLCRW-IDCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       114 ~s~~DPC~~-~~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      =.++|+|.. ++| +++|++.. ++|+|+|++||++..+
T Consensus        77 C~dideC~~~~~C-~~~C~n~~-g~y~C~C~~G~~g~~~  113 (118)
T 1dx5_I           77 CTDIDECENGGFC-SGVCHNLP-GTFECICGPDSALAGQ  113 (118)
T ss_dssp             EEECCHHHHCSSC-SSEEEECS-SSEEEEECSSSSCEEE
T ss_pred             cccccccCCCCCC-cCeEEeCC-CCEEEECCCCCccCCC
Confidence            124689987 889 88999975 7999999999998653

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.25  E-value=1e-12  Score=105.44  Aligned_cols=108  Identities=24%  Similarity=0.385  Sum_probs=73.1

Q ss_pred             cCCCcc-CCCCCCeeeccCCCCCcceeecCCCCc----cCcccccCC--CccC--Ccc---CCCCCC-------CCCCCC
Q 027951           40 ENVCDK-VTCGKGKCKASQNSTFFYECECDLGWK----QNTMAVDQN--LKFL--PCI---APDCTL-------NQDCAP  100 (216)
Q Consensus        40 ~~~C~~-~~Cg~GtC~~~~~~~~~Y~C~C~pGwt----g~~c~~~d~--~~~l--PC~---ipnCt~-------n~sC~~  100 (216)
                      .|.|+. .+|.+|+|+.+   ..+|+|+|.+||+    |.+|+++++  |...  ||.   ...|+.       .|.|.+
T Consensus         3 ideC~~~~~C~~~~C~n~---~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C   79 (162)
T 1uzk_A            3 VNECLDPTTCISGNCVNT---PGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC   79 (162)
T ss_dssp             CCGGGSTTSSBTSEEEEE---TTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred             cccCCCCCCCCCCEeECC---CCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence            367874 78989999988   6799999999998    888886665  5543  232   224554       355666


Q ss_pred             CCCCccc-------------------c--c-cc----CCCCcCCCCCC--CCcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951          101 SPSPAQE-------------------K--A-AK----KNESIFDLCRW--IDCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       101 ~~~~~~~-------------------~--~-~~----~n~s~~DPC~~--~~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      .+++...                   .  . ++    ....++|+|..  ++|.+|+|++.. ++|+|.|++||++..+
T Consensus        80 ~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~-gsy~C~C~~Gy~g~~d  157 (162)
T 1uzk_A           80 SLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTF-GSFQCRCPTGYYLNED  157 (162)
T ss_dssp             TTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECS-SCEEEECCTTCCBCTT
T ss_pred             CCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCC-CCEEeeCCCCccCCCC
Confidence            5554300                   0  0 11    11246799985  469988999975 8999999999998654

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.24  E-value=8.6e-13  Score=107.93  Aligned_cols=110  Identities=20%  Similarity=0.485  Sum_probs=80.6

Q ss_pred             CCCc----cCCCCC-CeeeccCC--CCCcceeecCCCCccCccc-ccCCCccCCccC-CCCC----C---CCCCCCCCCC
Q 027951           41 NVCD----KVTCGK-GKCKASQN--STFFYECECDLGWKQNTMA-VDQNLKFLPCIA-PDCT----L---NQDCAPSPSP  104 (216)
Q Consensus        41 ~~C~----~~~Cg~-GtC~~~~~--~~~~Y~C~C~pGwtg~~c~-~~d~~~~lPC~i-pnCt----~---n~sC~~~~~~  104 (216)
                      +.|.    ..+|++ |+|+....  ...+|+|+|.+||+|..+. ++++|...||.. ..|+    .   .|.|.+.++|
T Consensus        45 d~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy  124 (186)
T 1z1y_A           45 NECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGX  124 (186)
T ss_dssp             CCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEE
T ss_pred             CcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCC
Confidence            5787    567986 69998731  0168999999999998544 378999999984 4787    3   4789998888


Q ss_pred             cccccccCC-CCc-CCCCCCCCc-C-CCeeecCCCCceeeecCCCCcCCCCC
Q 027951          105 AQEKAAKKN-ESI-FDLCRWIDC-G-GGSCKNTSMFSYSCQCAVDHYNLLNT  152 (216)
Q Consensus       105 ~~~~~~~~n-~s~-~DPC~~~~C-g-gGtCv~~~~~sY~C~C~~Gy~nlln~  152 (216)
                      .-....++. +.+ .|+|. .+| + +|+|++.. ++|+|+|++||+|....
T Consensus       125 ~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n~~-g~y~C~C~~G~~g~~~~  174 (186)
T 1z1y_A          125 VPNPEDEXXCTXTGETACQ-LXCNTDNEVCXNVE-GVYXCQCMEGFTFDXEX  174 (186)
T ss_dssp             EEETTTTTEEEEEECCCCC-CCCCTTTEEEEEET-TEEEEEECTTCEEETTT
T ss_pred             cccCCCCCcceEcCCCccc-ccccccCcceecCC-CCeeeECCCCCccCccc
Confidence            321111233 322 48898 599 6 78999975 79999999999987643

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.23  E-value=2.9e-12  Score=104.37  Aligned_cols=79  Identities=23%  Similarity=0.499  Sum_probs=42.1

Q ss_pred             ceeecCCCCccCcccccCCCccCC-ccCCCCCCCCCCCCCCCCcccccccCC-CCcCCCCCC-CCcC-CCeeecCCCCce
Q 027951           63 YECECDLGWKQNTMAVDQNLKFLP-CIAPDCTLNQDCAPSPSPAQEKAAKKN-ESIFDLCRW-IDCG-GGSCKNTSMFSY  138 (216)
Q Consensus        63 Y~C~C~pGwtg~~c~~~d~~~~lP-C~ipnCt~n~sC~~~~~~~~~~~~~~n-~s~~DPC~~-~~Cg-gGtCv~~~~~sY  138 (216)
                      |+|+|++||+|..|+   ++...| |.++.|+..+.|.+.++|     ++.+ +.++|+|.. .+|. +|+|++...++|
T Consensus        83 ~~C~C~~G~~G~~C~---~C~~~~~C~~g~C~~~~~C~C~~G~-----~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~  154 (169)
T 2vj2_A           83 GDCRCQYGWQGLYCD---KCIPHPGCVHGICNEPWQCLCETNW-----GGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKY  154 (169)
T ss_dssp             TCCEECTTEESSSSC---EECCCTTCSSEECSSTTCCEECTTE-----ETTTTCEESCHHHHTCCCCTTCEEEECSTTCE
T ss_pred             CeeECCCCCCCCCcc---cCCCCCCCCCCCcCCCCEEeCCCCC-----CCCcccCCCCCCCCCCCCCCCCEEcCCCCCCc
Confidence            556666666666553   233333 555555555666665555     2333 323455553 4565 456665423456


Q ss_pred             eeecCCCCcCC
Q 027951          139 SCQCAVDHYNL  149 (216)
Q Consensus       139 ~C~C~~Gy~nl  149 (216)
                      +|+|++||+|.
T Consensus       155 ~C~C~~G~~G~  165 (169)
T 2vj2_A          155 QCSCPEGYSGP  165 (169)
T ss_dssp             EEECCTTCCST
T ss_pred             EeECCCCCcCc
Confidence            66666666654

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.21  E-value=2.7e-12  Score=100.89  Aligned_cols=102  Identities=25%  Similarity=0.441  Sum_probs=75.1

Q ss_pred             CCccCCCC-CCeeeccCCCCCcceeecCCCCcc---------CcccccCCCccC---CccCC-CCCC---CCCCCCCCCC
Q 027951           42 VCDKVTCG-KGKCKASQNSTFFYECECDLGWKQ---------NTMAVDQNLKFL---PCIAP-DCTL---NQDCAPSPSP  104 (216)
Q Consensus        42 ~C~~~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg---------~~c~~~d~~~~l---PC~ip-nCt~---n~sC~~~~~~  104 (216)
                      .|. .+|. +|+|+..      |+|+|.+||+|         ..|+++++|...   ||... .|++   .|.|.+.++|
T Consensus         4 ~C~-~~C~~~~~C~~~------~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy   76 (143)
T 2bou_A            4 GCA-RWCPQDSSCVNA------TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGY   76 (143)
T ss_dssp             CCC-TTCCTTEEESSS------SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTE
T ss_pred             CCc-CcCCCCCEEcCC------CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCc
Confidence            453 4687 5799763      89999999998         578778999876   89854 7875   5789998888


Q ss_pred             ccccc-------ccCCCCcCCCCCC--CCcC-CCeeecCCCCceeeecCCCCcCCCC
Q 027951          105 AQEKA-------AKKNESIFDLCRW--IDCG-GGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       105 ~~~~~-------~~~n~s~~DPC~~--~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      .-..-       .+..=.++|+|..  ++|. +++|++.. ++|+|+|++||++..+
T Consensus        77 ~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~-g~y~C~C~~Gy~g~~~  132 (143)
T 2bou_A           77 EPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTV-GSYSCRCRPGWKPRHG  132 (143)
T ss_dssp             EETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECS-SCEEEECCSSSCBCTT
T ss_pred             ccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCC-CCEEeeCCCCcccCCC
Confidence            43110       0112124689984  7898 78999975 7999999999999764

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.19  E-value=1e-11  Score=121.13  Aligned_cols=106  Identities=17%  Similarity=0.382  Sum_probs=81.5

Q ss_pred             CCCccCCCCC-CeeeccCCCCCccee-ecCCCCcc--CcccccCCCccCC--ccCC----CCCC---CCCCC-CCCCCcc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYEC-ECDLGWKQ--NTMAVDQNLKFLP--CIAP----DCTL---NQDCA-PSPSPAQ  106 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C-~C~pGwtg--~~c~~~d~~~~lP--C~ip----nCt~---n~sC~-~~~~~~~  106 (216)
                      +.|...+|.+ |+|+...  ..+|+| +|.+||+|  ..|+++++|...|  |.+.    .|+.   .|.|. |.++|.-
T Consensus         4 DeC~~nPC~~gg~C~n~~--~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G   81 (634)
T 1yo8_A            4 DGCLSNPCFPGAQCSSFP--DGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRG   81 (634)
T ss_dssp             CGGGGCCSCTTCCEEECT--TSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEE
T ss_pred             cccCCCCCCCCCEEecCC--CCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCccc
Confidence            5799999996 5999873  234999 99999998  7898899999999  9865    5875   58898 9888842


Q ss_pred             ccc----------ccCCCCcCCCCCC--CCcC-CCeeecCC---CCceeeecCCCCcC
Q 027951          107 EKA----------AKKNESIFDLCRW--IDCG-GGSCKNTS---MFSYSCQCAVDHYN  148 (216)
Q Consensus       107 ~~~----------~~~n~s~~DPC~~--~~Cg-gGtCv~~~---~~sY~C~C~~Gy~n  148 (216)
                      ..-          .++.=..+++|..  ++|. +++|++..   .++|+|+|++||+|
T Consensus        82 ~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G  139 (634)
T 1yo8_A           82 NQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG  139 (634)
T ss_dssp             CCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE
T ss_pred             CccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccc
Confidence            110          1111124689985  5898 78999864   27899999999998

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.15  E-value=1.3e-11  Score=91.77  Aligned_cols=79  Identities=18%  Similarity=0.303  Sum_probs=63.5

Q ss_pred             cceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCC-C-CcCCCCCCCCcC-CCeeecCC-CCc
Q 027951           62 FYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKN-E-SIFDLCRWIDCG-GGSCKNTS-MFS  137 (216)
Q Consensus        62 ~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n-~-s~~DPC~~~~Cg-gGtCv~~~-~~s  137 (216)
                      +|+|.|.+||+|..|+ ++++...||++.  ...|.|.+.++|.       + + ..+|+|..++|. +|+|++.. .++
T Consensus         1 sy~C~C~~g~~g~~c~-~~~c~~~pC~n~--~~~y~C~C~~G~~-------~C~~~~~~~C~~~pC~ngg~C~~~~~~~~   70 (91)
T 1tpg_A            1 SYQVICRDEKTQMIYQ-QHQSWLRPVLRS--NRVEYCWCNSGRA-------QCHSVPVKSCSEPRCFNGGTCQQALYFSD   70 (91)
T ss_dssp             CCCCCCBCSSSCCBCC-SSCEEEEECSSS--SCEEEEECSSSCC-------BCCEECEEECSSCCSCTTCEEEEESSSSC
T ss_pred             CeeeECCCCCcCCeEC-CCcccCCccccC--CCCcEeECCCCCc-------ccccCcCCcccCCCCCCCCEeecCCCCCC
Confidence            5899999999999885 678888888755  2358899988883       2 3 346899999999 78999853 368


Q ss_pred             eeeecCCCCcCCC
Q 027951          138 YSCQCAVDHYNLL  150 (216)
Q Consensus       138 Y~C~C~~Gy~nll  150 (216)
                      |+|.|++||+|..
T Consensus        71 ~~C~C~~G~~G~~   83 (91)
T 1tpg_A           71 FVCQCPEGFAGKS   83 (91)
T ss_dssp             EEEECCTTCBSSS
T ss_pred             eEeECCCCCcCCc
Confidence            9999999999865

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.12  E-value=7.9e-11  Score=90.17  Aligned_cols=72  Identities=21%  Similarity=0.429  Sum_probs=52.2

Q ss_pred             cCCCccCC--------CC-CCeeeccCCCCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccc
Q 027951           40 ENVCDKVT--------CG-KGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAA  110 (216)
Q Consensus        40 ~~~C~~~~--------Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~  110 (216)
                      .+.|+..+        |. +|+|++.   ..+|+|+|.+||+|..|++++                              
T Consensus         6 ~d~C~~~p~~~~C~~~C~~~g~C~~~---~~~y~C~C~~G~~G~~C~~~~------------------------------   52 (114)
T 1aut_L            6 GDQCLVLPLEHPCASLCCGHGTCIDG---IGSFSCDCRSGWEGRFCQREV------------------------------   52 (114)
T ss_dssp             --CCCCCSSCCSSSSTTTTSEEECCC---SSCCCEEECTTEESTTSCEEC------------------------------
T ss_pred             cccccCCCccccccccCCCcCCCCCC---CCCcEeeCCCCCcCCCcCcCC------------------------------
Confidence            35677666        76 5699887   568999999999999865311                              


Q ss_pred             cCCCCcCCCCCCC--CcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951          111 KKNESIFDLCRWI--DCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       111 ~~n~s~~DPC~~~--~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                           ..|+|...  .|.+ +|++.. ++|+|+|.+||++..+
T Consensus        53 -----~~~~C~~~~~~C~~-~C~n~~-g~y~C~C~~G~~~~~~   88 (114)
T 1aut_L           53 -----SFLNCSLDNGGCTH-YCLEEV-GWRRCSCAPGYKLGDD   88 (114)
T ss_dssp             -----CSSSSSSGGGGCSS-EEEECS-SSEEEECCTTEEECTT
T ss_pred             -----cCCcCcCCCCCCCC-EeECCC-CCEEeECCCCeeECCC
Confidence                 12466643  3444 999975 7999999999997654

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.01  E-value=3.6e-10  Score=98.46  Aligned_cols=69  Identities=25%  Similarity=0.503  Sum_probs=55.3

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcCC
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFD  118 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~D  118 (216)
                      .+.|...+|.+ |+|++.   ..+|+|+|.+||+|..|+.                                     +.|
T Consensus         5 ~~~C~~~pC~~~g~C~~~---~~~~~C~C~~g~~g~~C~~-------------------------------------~~~   44 (317)
T 3h5c_B            5 GSPCISQPCLHNGSCQDS---IWGYTCTCSPGYEGSNCEL-------------------------------------AKN   44 (317)
T ss_dssp             -CCTTSCCCTTTCCCCCC---SSSCCCCCSSSCCSSSSCC-------------------------------------CSS
T ss_pred             CCcCCCCCCCCCCEeECC---CCCeEEECCCCCcCCcccc-------------------------------------Ccc
Confidence            57899999997 699987   5689999999999998641                                     235


Q ss_pred             CCCC---CCcCCCeeecCCCCceeeecCCCCcCCC
Q 027951          119 LCRW---IDCGGGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       119 PC~~---~~CggGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      +|..   .+|.+ +|++.. ++|+|.|.+||.+..
T Consensus        45 eC~~~~~~~C~~-~C~~~~-g~~~C~C~~g~~~~~   77 (317)
T 3h5c_B           45 ECHPERTDGCQH-FCLPGQ-ESYTCSCAQGYRLGE   77 (317)
T ss_dssp             SCCTTCTTSCSS-EEECCS-SSCEEECCTTEECCT
T ss_pred             cCCCCCCCCCcC-ccccCC-CeeEEeccccccccc
Confidence            6654   56777 999865 799999999999854

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.01  E-value=2e-10  Score=92.06  Aligned_cols=67  Identities=24%  Similarity=0.587  Sum_probs=51.8

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcCC
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFD  118 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~D  118 (216)
                      .+.|...+|.+ |+|++.   ..+|+|.|.+||+|..|+++                                      |
T Consensus        48 ideC~~~pC~n~g~C~~~---~~~y~C~C~~G~~G~~C~~~--------------------------------------d   86 (146)
T 1x7a_L           48 GDQCEPNPCLNGGLCKDD---INSYECWCQVGFEGKNCELD--------------------------------------A   86 (146)
T ss_dssp             --CCSSCSSCTTCEEEEC---SSCEEEECCSSEESTTTCEE--------------------------------------C
T ss_pred             cCcCCCCCCCCCCEeECC---CCCEEEecCCCCcCCcCCCC--------------------------------------c
Confidence            46899999997 699987   56899999999999986532                                      4


Q ss_pred             CCCCC--CcCCCee-ecCCCCceeeecCCCCcCC
Q 027951          119 LCRWI--DCGGGSC-KNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       119 PC~~~--~CggGtC-v~~~~~sY~C~C~~Gy~nl  149 (216)
                      +|...  .|.+ +| ++.. ++|+|.|++||.+.
T Consensus        87 eC~~~~~~C~~-~C~~n~~-g~y~C~C~~Gy~l~  118 (146)
T 1x7a_L           87 TCNIKNGRCKQ-FCKTGAD-SKVLCSCTTGYRLA  118 (146)
T ss_dssp             CTTSGGGSCSS-BCCCCSS-SCCCCBCCTTEEEC
T ss_pred             cccCCCCCCcC-CCCCCCC-CCEEeEcCCCcEeC
Confidence            55543  3555 89 7754 79999999999953

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.01  E-value=1e-10  Score=89.61  Aligned_cols=73  Identities=23%  Similarity=0.418  Sum_probs=30.1

Q ss_pred             CccccCCCccCCCCCC------eeeccCCCCCcceeecCCCCcc---CcccccCCCccCCccCCCCCCCCCCCCCCCCcc
Q 027951           36 APAFENVCDKVTCGKG------KCKASQNSTFFYECECDLGWKQ---NTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQ  106 (216)
Q Consensus        36 ~~~~~~~C~~~~Cg~G------tC~~~~~~~~~Y~C~C~pGwtg---~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~  106 (216)
                      ..+..+.|+..+|..+      +|++.   ..+|+|+|.+||+|   ..|+                             
T Consensus        20 ~~~~~~~Cd~neC~~~~~~C~~~C~n~---~g~y~C~C~~Gy~g~~g~~C~-----------------------------   67 (107)
T 2w2n_E           20 NLYFQGAMGTNECLDNNGGCSYVCNDL---KIGYECLCPDGFQLVAQRRCE-----------------------------   67 (107)
T ss_dssp             CCCCSCCBSCCGGGTGGGGCSSEEECC---SBSCEEECCTTCEEETTTEEE-----------------------------
T ss_pred             CCcCCCCCcCccCcCCCCCCCCEeEeC---CCCeEEECCCCccccCCCccc-----------------------------
Confidence            3455788988899853      88876   66899999999998   4432                             


Q ss_pred             cccccCCCCcCCCCCC-CCcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951          107 EKAAKKNESIFDLCRW-IDCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       107 ~~~~~~n~s~~DPC~~-~~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                               ++|+|.. .+|. ++|++.. ++|+|.|.+||.+..+
T Consensus        68 ---------dideC~~~~~C~-~~C~n~~-gsy~C~C~~Gy~~~~d  102 (107)
T 2w2n_E           68 ---------DIDECQDPDTCS-QLCVNLE-GGYKCQCEEGFQLDPH  102 (107)
T ss_dssp             ---------C------------------------------------
T ss_pred             ---------cccccCCCCCcC-CeeecCC-CCEEEECCCCceECCC
Confidence                     2466763 5676 7999975 7999999999997653

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.99  E-value=2.9e-10  Score=90.20  Aligned_cols=72  Identities=18%  Similarity=0.375  Sum_probs=51.8

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccc-cCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcC
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAV-DQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIF  117 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~-~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~  117 (216)
                      .+.|...+|++ |+|++.   ..+|+|.|.+||+|.+|++ ++++..                                 
T Consensus        47 id~C~~~pC~n~g~C~~~---~g~y~C~C~~G~~G~~C~~~~~~c~~---------------------------------   90 (142)
T 2c4f_L           47 GDQCASSPCQNGGSCKDQ---LQSYICFCLPAFEGRNCETHKDDQLI---------------------------------   90 (142)
T ss_dssp             CCGGGGCCCCTTCEEEEE---TTEEEEECCTTEESTTSCEEGGGCCS---------------------------------
T ss_pred             cCcCcCCCcCCCCEEeCC---CCCEEeeCCCCccCCccccCcccccc---------------------------------
Confidence            46899999997 699987   5689999999999998753 222111                                 


Q ss_pred             CCCCCCCcCCCeeecCCCCceeeecCCCCcC
Q 027951          118 DLCRWIDCGGGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       118 DPC~~~~CggGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      .+|....|.+ +|++..+.+|+|.|++||++
T Consensus        91 c~~~~~~C~~-~C~~~~g~~y~C~C~~Gy~l  120 (142)
T 2c4f_L           91 CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSL  120 (142)
T ss_dssp             TTTGGGGCSS-EEECCTTSCCEEECCTTEEE
T ss_pred             ccCCCCCccC-EeECCCCCCEEEECCCCceE
Confidence            1122223443 89987633999999999993

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.95  E-value=1.9e-10  Score=90.67  Aligned_cols=67  Identities=28%  Similarity=0.620  Sum_probs=21.9

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcC-
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIF-  117 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~-  117 (216)
                      .+.|...+|++ |+|++.   ..+|+|.|.+||+|..|++                                     .+ 
T Consensus        42 ~d~C~~~pC~n~g~C~~~---~~~y~C~C~~G~~G~~C~~-------------------------------------~i~   81 (134)
T 2vh0_B           42 GDQCETSPCQNQGKCKDG---LGEYTCTCLEGFEGKNCEL-------------------------------------FTR   81 (134)
T ss_dssp             -------------------------------------------------------------------------------C
T ss_pred             cCcCCCCCCCCcCCcccC---CCCEEeeCCCCccCCcccc-------------------------------------CCC
Confidence            46799899997 699887   5689999999999988642                                     12 


Q ss_pred             CCCCCC--CcCCCeeecCCCCceeeecCCCCcC
Q 027951          118 DLCRWI--DCGGGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       118 DPC~~~--~CggGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      |+|...  .|.+ +|++.. ++|+|.|.+||+.
T Consensus        82 d~C~~~~~~C~~-~C~~~~-g~y~C~C~~Gy~l  112 (134)
T 2vh0_B           82 KLCSLDNGDCDQ-FCHEEQ-NSVVCSCARGYTL  112 (134)
T ss_dssp             CGGGTGGGGCSS-EEEEET-TEEEEECCTTEEE
T ss_pred             CccccCCCCCCC-EeECCC-CCEEEECCCCcEE
Confidence            455542  4555 999875 7999999999993

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.94  E-value=4.2e-10  Score=82.40  Aligned_cols=66  Identities=27%  Similarity=0.613  Sum_probs=50.3

Q ss_pred             cCCCccCC--CCCCeeeccCCCCCcceeecCCCCc----cCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCC
Q 027951           40 ENVCDKVT--CGKGKCKASQNSTFFYECECDLGWK----QNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKN  113 (216)
Q Consensus        40 ~~~C~~~~--Cg~GtC~~~~~~~~~Y~C~C~pGwt----g~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n  113 (216)
                      .+.|+..+  |.+|+|++.   ..+|+|+|.+||+    |..|+                                    
T Consensus         3 ideC~~~~~~C~~~~C~n~---~g~y~C~C~~G~~~~~~g~~C~------------------------------------   43 (87)
T 1z6c_A            3 VDECSLKPSICGTAVCKNI---PGDFECECPEGYRYNLKSKSCE------------------------------------   43 (87)
T ss_dssp             SCSSSSSSSSBTTSSCCCB---TTBCCCSSSTTCEEETTTTEEE------------------------------------
T ss_pred             cccccCCCCCCCCCEeECC---CCCEEEECCCCceECCCCCcCC------------------------------------
Confidence            36788877  877899987   6689999999999    44432                                    


Q ss_pred             CCcCCCCCCCCcCCCeeecCCCCceeeecCCCCcCC
Q 027951          114 ESIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       114 ~s~~DPC~~~~CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                        ++|+|..++|. ++|++.. ++|+|+|+ ||.|.
T Consensus        44 --dideC~~~~C~-~~C~n~~-g~y~C~C~-g~~G~   74 (87)
T 1z6c_A           44 --DIDECSENMCA-QLCVNYP-GGYTCYCD-GKKGF   74 (87)
T ss_dssp             --CCCHHHHSCCS-SEECCCS-SSCCEECC-SSSCC
T ss_pred             --CcCeeCCCCCC-CEEEccC-CCEEEECC-CCcCC
Confidence              24677667777 7999975 79999996 55553

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.92  E-value=2.5e-10  Score=96.59  Aligned_cols=66  Identities=29%  Similarity=0.641  Sum_probs=21.7

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcC-
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIF-  117 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~-  117 (216)
                      .+.|...+|++ |+|+..   ..+|+|.|.+||+|..|++                                     .+ 
T Consensus        42 ideC~~~pC~ngg~C~n~---~g~y~C~C~~Gf~G~~Ce~-------------------------------------~i~   81 (195)
T 1nfu_B           42 GDQCETSPCQNQGKCKDG---LGEYTCTCLEGFEGKNCEL-------------------------------------FTR   81 (195)
T ss_dssp             -------------------------------------------------------------------------------C
T ss_pred             CcccCCCCCCCCCEeECC---CCCeeEeCCCCceeccccc-------------------------------------ccc
Confidence            46899999997 699987   5689999999999998642                                     12 


Q ss_pred             CCCCC--CCcCCCeeecCCCCceeeecCCCCc
Q 027951          118 DLCRW--IDCGGGSCKNTSMFSYSCQCAVDHY  147 (216)
Q Consensus       118 DPC~~--~~CggGtCv~~~~~sY~C~C~~Gy~  147 (216)
                      |+|..  ..|.+ +|++.. ++|+|.|.+||.
T Consensus        82 deC~~~~~~C~~-~C~n~~-gsy~C~C~~Gy~  111 (195)
T 1nfu_B           82 KLCSLDNGDCDQ-FCHEEQ-NSVVCSCARGYT  111 (195)
T ss_dssp             CGGGTGGGGCSS-EEEEET-TEEEEECCTTEE
T ss_pred             ccccCCCCCCCC-EeECCC-CCeEEECCCCce
Confidence            45554  24665 999875 799999999999

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.88  E-value=1.4e-09  Score=106.78  Aligned_cols=112  Identities=21%  Similarity=0.412  Sum_probs=80.9

Q ss_pred             CCccCCCCC-CeeeccCCCCCcce---eecCCCCccCcccc-c--------CCCccC----Ccc-CCCCCCCCCCCCC--
Q 027951           42 VCDKVTCGK-GKCKASQNSTFFYE---CECDLGWKQNTMAV-D--------QNLKFL----PCI-APDCTLNQDCAPS--  101 (216)
Q Consensus        42 ~C~~~~Cg~-GtC~~~~~~~~~Y~---C~C~pGwtg~~c~~-~--------d~~~~l----PC~-ipnCt~n~sC~~~--  101 (216)
                      .|...+|.+ |+|.+.   .+.|.   |+|.+||+|.+|+. +        ++|...    +|. ++.|. ++.|.+.  
T Consensus       436 ~C~~~pc~n~~~C~~g---~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~g~C~C~~~  511 (690)
T 3fcs_B          436 ACQAQAEPNSHRCNNG---NGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL-CGQCVCHSS  511 (690)
T ss_dssp             GGGTTCCTTCTTTTTT---SEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC-SSSEEECCC
T ss_pred             CCcCCCCCCCCcccCC---CCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE-CCeeEeecC
Confidence            577788886 589754   44677   99999999999973 3        567653    476 34776 5788888  


Q ss_pred             --CCCcccccccCC-CCcCCCCCC---CCcC-CCeeecCCCCceeeecCCCCcCCCCC---Cccccc----ccCCccccc
Q 027951          102 --PSPAQEKAAKKN-ESIFDLCRW---IDCG-GGSCKNTSMFSYSCQCAVDHYNLLNT---STFPCY----KECSIGMDC  167 (216)
Q Consensus       102 --~~~~~~~~~~~n-~s~~DPC~~---~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~---t~~pC~----~~CslG~dC  167 (216)
                        ++|     ++.+ +...+.|..   ..|. +|+|+.     |+|.|++||+|..-.   ....|.    ..|+-++.|
T Consensus       512 ~~~Gy-----~G~~Ce~~~~~C~~~~~~~C~~~G~C~~-----g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C  581 (690)
T 3fcs_B          512 DFGKI-----TGKYCECDDFSCVRYKGEMCSGHGQCSC-----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKC  581 (690)
T ss_dssp             SSCCC-----BSTTSCBCSSCCCBSSSSBGGGSEEEET-----TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEE
T ss_pred             CCCCe-----eCCCcCcccCcCcCCCCCCCCCCCEecC-----CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEE
Confidence              777     4555 545678985   4797 889976     789999999998754   356676    345555554

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.86  E-value=2.1e-09  Score=96.39  Aligned_cols=103  Identities=22%  Similarity=0.412  Sum_probs=57.1

Q ss_pred             CCCC-CCeeeccCCCCCcceeecCCCCccCcccccCCCccCCccC-CCCCCCCCCCCCCCCcccccccCC-CCcCCCCCC
Q 027951           46 VTCG-KGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIA-PDCTLNQDCAPSPSPAQEKAAKKN-ESIFDLCRW  122 (216)
Q Consensus        46 ~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~i-pnCt~n~sC~~~~~~~~~~~~~~n-~s~~DPC~~  122 (216)
                      .+|. +|+|.+      .|+|+|.+||+|..|+. +.|. .+|.. +.|...+.|.+.++|     ++.+ +.  +.|. 
T Consensus       153 ~~C~~~G~C~~------~~~C~C~~G~~G~~C~~-~~C~-~~C~~~G~C~~~~~C~C~~G~-----~G~~C~~--~~C~-  216 (324)
T 2ygq_A          153 GGCRNGGFCNE------RRICECPDGFHGPHCEK-ALCT-PRCMNGGLCVTPGFCICPPGF-----YGVNCDK--ANCS-  216 (324)
T ss_dssp             SCCCSSCEECT------TSCEECCTTEESSSSCE-ESSS-SCCCTTCEECSSCCEECCTTC-----BTTTTCB--CCCS-
T ss_pred             CCCCCCCEECC------CCeEECCCCCcCCCCCC-CCCC-CCCCCCCEEcCCCEEeCCCCc-----cCCCccc--CcCC-
Confidence            4576 478864      37888889988888864 3444 36763 467777788888877     3333 21  3454 


Q ss_pred             CCcC-CCeeecCCCCceeeecCCCCcCCCCCCcccccccCCccccccc
Q 027951          123 IDCG-GGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKN  169 (216)
Q Consensus       123 ~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t~~pC~~~CslG~dC~~  169 (216)
                      .+|. +|+|++    .|+|+|++||+|..-. ...|...|.-|+.|.+
T Consensus       217 ~~C~~~G~C~~----~~~C~C~~G~~G~~C~-~~~C~~~C~~~g~C~~  259 (324)
T 2ygq_A          217 TTCFNGGTCFY----PGKCICPPGLEGEQCE-ISKCPQPCRNGGKCIG  259 (324)
T ss_dssp             SCCCSSCCBSC----SSCBCCCTTCCTTTTC-----------------
T ss_pred             CCCCCCCeeCC----CCeeeCCCCccCCCCC-cCcCCCcCCCCCEECC
Confidence            5676 677765    2678888888776532 3455556665555543

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.84  E-value=3.4e-09  Score=94.96  Aligned_cols=102  Identities=23%  Similarity=0.484  Sum_probs=41.7

Q ss_pred             CCC-CCeeeccCCCCCcceeecCCCCccCcccccCCCccCCccC-CCCCCCCCCCCCCCCcccccccCC-CCcCCCCCCC
Q 027951           47 TCG-KGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIA-PDCTLNQDCAPSPSPAQEKAAKKN-ESIFDLCRWI  123 (216)
Q Consensus        47 ~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~i-pnCt~n~sC~~~~~~~~~~~~~~n-~s~~DPC~~~  123 (216)
                      +|. +|+|+.      .|+|+|.+||+|..|+. +.|. .||.. +.|...+.|.+.++|     ++.+ +  .+.|. .
T Consensus       186 ~C~~~G~C~~------~~~C~C~~G~~G~~C~~-~~C~-~~C~~~G~C~~~~~C~C~~G~-----~G~~C~--~~~C~-~  249 (324)
T 2ygq_A          186 RCMNGGLCVT------PGFCICPPGFYGVNCDK-ANCS-TTCFNGGTCFYPGKCICPPGL-----EGEQCE--ISKCP-Q  249 (324)
T ss_dssp             CCCTTCEECS------SCCEECCTTCBTTTTCB-CCCS-SCCCSSCCBSCSSCBCCCTTC-----CTTTTC---------
T ss_pred             CCCCCCEEcC------CCEEeCCCCccCCCccc-CcCC-CCCCCCCeeCCCCeeeCCCCc-----cCCCCC--cCcCC-C
Confidence            455 578865      37899999999999974 3464 68885 489888999999998     3444 3  25675 6


Q ss_pred             CcC-CCeeecCCCCceeeecCCCCcCCCCCCcccccccCCccccccc
Q 027951          124 DCG-GGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKN  169 (216)
Q Consensus       124 ~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t~~pC~~~CslG~dC~~  169 (216)
                      +|. +|+|+.    .|+|+|++||+|..-. ...|...|+-++.|.+
T Consensus       250 ~C~~~g~C~~----~~~C~C~~G~~G~~C~-~~~C~~~C~~~g~C~~  291 (324)
T 2ygq_A          250 PCRNGGKCIG----KSKCKCSKGYQGDLCS-KPVCEPGCGAHGTCHE  291 (324)
T ss_dssp             -----------------------------------------------
T ss_pred             cCCCCCEECC----CCEEECCCCCcCCCCc-CCCCCCCCCCCCEECC
Confidence            788 789985    4899999999998633 4567777777777764

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.78  E-value=5e-11  Score=105.70  Aligned_cols=98  Identities=12%  Similarity=0.088  Sum_probs=66.8

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccc-cCCCccCCccCC-CCCCCCCCCCCCCCcccccccCC-CC
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAV-DQNLKFLPCIAP-DCTLNQDCAPSPSPAQEKAAKKN-ES  115 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~-~d~~~~lPC~ip-nCt~n~sC~~~~~~~~~~~~~~n-~s  115 (216)
                      .+.|.+.+|.+ |+|++.   ..+|+|+|.+||+|.+|+. ++++...+|... .|.....|.          .+.+ +.
T Consensus        99 ~~eC~s~pC~ngG~C~~~---~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~----------~G~~c~~  165 (267)
T 4fbr_A           99 NIVAVSIKSNDGGKTLTG---TTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWV----------LGTRGKQ  165 (267)
T ss_dssp             CEEEEEEECSSTTSEEEE---EEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEE----------CCSSTTS
T ss_pred             ccccCCCCCCCCCEEecC---CccEEeeCCCCccccCCCCCcccccccCCcCCccccCCccee----------ccccccc
Confidence            34788899996 699987   5689999999999999984 667443332211 111111111          1223 22


Q ss_pred             cCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCCC
Q 027951          116 IFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLNT  152 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~  152 (216)
                      . +.|...+|. +|+|++.. .+|+|+|++||+|.+-.
T Consensus       166 ~-i~c~~~~c~ngg~C~dg~-~~y~C~Cp~Gf~G~~c~  201 (267)
T 4fbr_A          166 N-VINVDAKSNDGGKTLSGT-MTYNGEGPIGFRGTLTS  201 (267)
T ss_dssp             C-EEEEEEECSSTTSEEEEE-EEETTSCCEEEEEEEEE
T ss_pred             c-cccCCCCCCCCCEeeCCC-CCeEEeCCCCccccccc
Confidence            2 345567787 89999965 79999999999998743

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.76  E-value=8.7e-11  Score=104.19  Aligned_cols=87  Identities=14%  Similarity=0.164  Sum_probs=66.8

Q ss_pred             cCCCC-CCeeeccCCCCCcceeecCCCCccCccc-ccCC------CccCCccCC-CCCCCCCCCCCCCCcccccccCCCC
Q 027951           45 KVTCG-KGKCKASQNSTFFYECECDLGWKQNTMA-VDQN------LKFLPCIAP-DCTLNQDCAPSPSPAQEKAAKKNES  115 (216)
Q Consensus        45 ~~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~-~~d~------~~~lPC~ip-nCt~n~sC~~~~~~~~~~~~~~n~s  115 (216)
                      +++|+ +|+|++.   ..+|+|+|.+||+|.+|+ ++++      +...||+.. .|...                .+-.
T Consensus        37 ~~~c~ngG~C~~g---~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G----------------~~c~   97 (267)
T 4fbr_A           37 DIKSDDGGKTLKG---TMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLG----------------ARDK   97 (267)
T ss_dssp             EEECSSTTSEEEE---EEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECC----------------CCSS
T ss_pred             CCCcCCCCeecCC---CCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeecc----------------Cccc
Confidence            34666 5799997   668999999999999998 4777      666777643 34322                2211


Q ss_pred             cCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCC
Q 027951          116 IFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      ..++|...+|. +|+|++.. .+|+|+|.+||+|..-
T Consensus        98 ~~~eC~s~pC~ngG~C~~~~-~sy~C~C~~Gf~G~~C  133 (267)
T 4fbr_A           98 QNIVAVSIKSNDGGKTLTGT-TTYNGEGPIGFKSEVT  133 (267)
T ss_dssp             CCEEEEEEECSSTTSEEEEE-EEETTSCCEEEEEEEC
T ss_pred             cccccCCCCCCCCCEEecCC-ccEEeeCCCCccccCC
Confidence            23689999999 89999976 7999999999999764

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.73  E-value=2.3e-09  Score=87.13  Aligned_cols=101  Identities=22%  Similarity=0.360  Sum_probs=74.7

Q ss_pred             CCeeeccCCCCCcceeecCCCCccCcccccCCCccCCc--cCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCCC-cC
Q 027951           50 KGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPC--IAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWID-CG  126 (216)
Q Consensus        50 ~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC--~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~DPC~~~~-Cg  126 (216)
                      +|+|..      ..+|+|.+||+|..|+. +.|. .+|  .++.|+..+.|.+.++|.     +.+   =+.|...+ |.
T Consensus        43 ~g~C~~------~g~C~C~~G~~G~~C~~-~~C~-~~C~~~~g~C~~~~~C~C~~G~~-----G~~---C~~C~~~~~C~  106 (169)
T 2vj2_A           43 HYACDQ------NGNKTCMEGWMGPECNR-AICR-QGCSPKHGSCKLPGDCRCQYGWQ-----GLY---CDKCIPHPGCV  106 (169)
T ss_dssp             EEEECS------SCCEEECTTEESTTSCE-ECCC-TTCCTTTEECSSTTCCEECTTEE-----SSS---SCEECCCTTCS
T ss_pred             CCEeCC------CCeeECCCCCcCCCCCC-CCCC-CCCCCCCcccCCCCeeECCCCCC-----CCC---cccCCCCCCCC
Confidence            678853      35799999999999874 3344 346  466788889999998882     333   13466555 88


Q ss_pred             CCeeecCCCCceeeecCCCCcCCCCC-Cccccc--ccCCcccccccC
Q 027951          127 GGSCKNTSMFSYSCQCAVDHYNLLNT-STFPCY--KECSIGMDCKNM  170 (216)
Q Consensus       127 gGtCv~~~~~sY~C~C~~Gy~nlln~-t~~pC~--~~CslG~dC~~l  170 (216)
                      +|+|+    .+|+|+|++||+|..-. ...+|.  ..|.-++.|.+.
T Consensus       107 ~g~C~----~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~  149 (169)
T 2vj2_A          107 HGICN----EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNT  149 (169)
T ss_dssp             SEECS----STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEEC
T ss_pred             CCCcC----CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCC
Confidence            88998    36999999999998754 567786  578888888774

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.71  E-value=1.4e-08  Score=99.77  Aligned_cols=111  Identities=21%  Similarity=0.439  Sum_probs=82.5

Q ss_pred             CCCccC----CCC-CCeeeccCCCCCcceeecC----CCCccCccc-ccCCCcc---CCcc-CCCCCCCCCCCCCCCCcc
Q 027951           41 NVCDKV----TCG-KGKCKASQNSTFFYECECD----LGWKQNTMA-VDQNLKF---LPCI-APDCTLNQDCAPSPSPAQ  106 (216)
Q Consensus        41 ~~C~~~----~Cg-~GtC~~~~~~~~~Y~C~C~----pGwtg~~c~-~~d~~~~---lPC~-ipnCt~n~sC~~~~~~~~  106 (216)
                      +.|...    +|. +|+|+.       ++|.|+    +||+|..|+ ++++|..   .+|. ++.|.. +.|.+.++|  
T Consensus       484 ~~C~~~~~~~~Cs~~G~C~~-------g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy--  553 (690)
T 3fcs_B          484 DECSPREGQPVCSQRGECLC-------GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC-GDCLCDSDW--  553 (690)
T ss_dssp             CCCSSSSSSCGGGGSEEECS-------SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET-TEEEECTTE--
T ss_pred             CcCCCCCCCCCCCCCCEEEC-------CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC-CeeECcCCC--
Confidence            457653    486 689973       689999    999999998 4677875   5887 457855 899999998  


Q ss_pred             cccccCC-C--CcCCCCCC---CCcC-CCeeecCCCCceeeec-CCCCcCCCCCCcccccccCCccccccc
Q 027951          107 EKAAKKN-E--SIFDLCRW---IDCG-GGSCKNTSMFSYSCQC-AVDHYNLLNTSTFPCYKECSIGMDCKN  169 (216)
Q Consensus       107 ~~~~~~n-~--s~~DPC~~---~~Cg-gGtCv~~~~~sY~C~C-~~Gy~nlln~t~~pC~~~CslG~dC~~  169 (216)
                         ++.+ +  ...+.|..   ..|. +|+|+.     .+|.| ++||+|..-..-..|-..|+-+..|.+
T Consensus       554 ---~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~-----g~C~C~~~Gy~G~~Ce~C~~C~~~C~~~g~Cv~  616 (690)
T 3fcs_B          554 ---TGYYCNCTTRTDTCMSSNGLLCSGRGKCEC-----GSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE  616 (690)
T ss_dssp             ---ESSSSCEECCCTTTBCTTSSBTSSSCEEET-----TEEECCSTTCBSTTSCBCTTSCCTTTSCCGGGT
T ss_pred             ---cCCCCccCCCCCcccCCCCCCCCCCCEEeC-----CEEECCCCCccCCCcCcCCCCCCCCCCCCCccc
Confidence               4555 4  34578876   6798 899976     28999 999999986542446666776666653

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=98.65  E-value=1.6e-08  Score=79.01  Aligned_cols=88  Identities=16%  Similarity=0.279  Sum_probs=68.1

Q ss_pred             cccCCCc--cCCccCC-CCCC---CCCCCCCCCCcccccccCC-CCcCCCCCCCCcC-CCeeecCCCCceeeecCCCCcC
Q 027951           77 AVDQNLK--FLPCIAP-DCTL---NQDCAPSPSPAQEKAAKKN-ESIFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus        77 ~~~d~~~--~lPC~ip-nCt~---n~sC~~~~~~~~~~~~~~n-~s~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      .++|+|.  ..||.+. .|..   .|.|.+.++|     ++.. +.++|+|...+|. +|+|++.. ++|+|+|++||+|
T Consensus         3 ~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy-----~G~~C~~~~~~C~~~~C~~~~~C~~~~-g~~~C~C~~G~~G   76 (135)
T 2vj3_A            3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGY-----TGPRCEIDVNECVSNPCQNDATCLDQI-GEFQCICMPGYEG   76 (135)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTE-----ESTTSCEECCTTTTCCCCSSCEEEECS-SCEEEECCTTEES
T ss_pred             cccccccCCCCCCCCCCEeECCCCCEEEECCCCC-----cCCcccccCccCCCCCCCCCCEEeCCC-CCceeeCCCCCcC
Confidence            4578888  6789854 7865   4789999988     3445 4467999999998 78999975 7899999999999


Q ss_pred             CCCC-Cccccc-ccCCcccccccC
Q 027951          149 LLNT-STFPCY-KECSIGMDCKNM  170 (216)
Q Consensus       149 lln~-t~~pC~-~~CslG~dC~~l  170 (216)
                      ..-. ...+|. ..|.-++.|.+.
T Consensus        77 ~~C~~~~~~C~~~~C~~~g~C~~~  100 (135)
T 2vj3_A           77 VHCEVNTDECASSPCLHNGRCLDK  100 (135)
T ss_dssp             SSSCEECCTTTTCCSTTTCEEEEC
T ss_pred             CcceecCCcccCCCcCCCCEeECC
Confidence            8753 456776 567777888654

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.62  E-value=2.6e-08  Score=89.61  Aligned_cols=68  Identities=28%  Similarity=0.470  Sum_probs=50.7

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecCCCCc---cCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECDLGWK---QNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESI  116 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwt---g~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~  116 (216)
                      +.|...+|+. ++|+++   +.+|+|.|.+||+   |..|++                                      
T Consensus         1 ~eC~~~~~~c~~~C~~~---~~~y~C~C~~G~~~~~~~~C~d--------------------------------------   39 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDL---KIGYECLCPDGFQLVAQRRCED--------------------------------------   39 (400)
T ss_dssp             CCTTTTGGGCSSEEEEC---SSSEEEECCTTEEECSSSCEEE--------------------------------------
T ss_pred             CcccCCCCCCCCEeECC---CCCeEEECCCCCCcCCCCcccC--------------------------------------
Confidence            4687777663 599987   6789999999999   555432                                      


Q ss_pred             CCCCCC-CCcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951          117 FDLCRW-IDCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       117 ~DPC~~-~~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      +|+|.. ..|.+ +|++.. ++|+|.|.+||.+..+
T Consensus        40 ideC~~~~~C~~-~C~n~~-g~~~C~C~~g~~~~~~   73 (400)
T 3p5b_L           40 IDECQDPDTCSQ-LCVNLE-GGYKCQCEEGFQLDPH   73 (400)
T ss_dssp             CCCCSTTSSCSS-CCBCCS-SSCBCCCCTTCCCCTT
T ss_pred             chhhhccCCCCC-ccCCCc-cceeeecccccccccc
Confidence            355652 45654 899875 7999999999987643

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=98.43  E-value=1.1e-07  Score=73.72  Aligned_cols=91  Identities=18%  Similarity=0.419  Sum_probs=62.0

Q ss_pred             CCCccCCccC-CCCCC-----CCCCCCCCCCccc---cc----ccCC-CCcCCCCCCCCcC-CCeeecC------CCCce
Q 027951           80 QNLKFLPCIA-PDCTL-----NQDCAPSPSPAQE---KA----AKKN-ESIFDLCRWIDCG-GGSCKNT------SMFSY  138 (216)
Q Consensus        80 d~~~~lPC~i-pnCt~-----n~sC~~~~~~~~~---~~----~~~n-~s~~DPC~~~~Cg-gGtCv~~------~~~sY  138 (216)
                      |+|...||.+ ..|..     .|.|.+.++|.-+   ..    .... -...|+|..++|. +|+|+..      ..++|
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~   80 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGY   80 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCE
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCe
Confidence            3567778875 37764     3789998888321   00    0000 1245899999998 7899932      22689


Q ss_pred             eeecCCCCcCCCCC-Cccccc-ccCCcccccccC
Q 027951          139 SCQCAVDHYNLLNT-STFPCY-KECSIGMDCKNM  170 (216)
Q Consensus       139 ~C~C~~Gy~nlln~-t~~pC~-~~CslG~dC~~l  170 (216)
                      +|.|++||.|..-. ...+|. ..|.-++.|.+.
T Consensus        81 ~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~  114 (143)
T 4d90_A           81 VCKCPRGFNGIHCQHNINECEVEPCKNGGICTDL  114 (143)
T ss_dssp             EEECCTTEESTTSCEECCTTTTCCSCTTCEEEEE
T ss_pred             EeECcCCCcCCCcccCCCcCCCCCCCCCCEeECC
Confidence            99999999998865 677886 668888888765

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.41  E-value=1.2e-07  Score=93.38  Aligned_cols=109  Identities=20%  Similarity=0.371  Sum_probs=77.8

Q ss_pred             CCccC----CCC-CCeeeccCCCCCcceeecC------CCCccCccc-ccCCCcc---CCcc---CCCCCCCCCCCCCCC
Q 027951           42 VCDKV----TCG-KGKCKASQNSTFFYECECD------LGWKQNTMA-VDQNLKF---LPCI---APDCTLNQDCAPSPS  103 (216)
Q Consensus        42 ~C~~~----~Cg-~GtC~~~~~~~~~Y~C~C~------pGwtg~~c~-~~d~~~~---lPC~---ipnCt~n~sC~~~~~  103 (216)
                      .|...    .|. +|+|..       .+|.|+      +||+|..|+ +.+.|..   .+|.   ++.|.. ..|.+.++
T Consensus       474 ~C~~~~~~~~Cs~~G~C~~-------G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~-g~C~C~~G  545 (687)
T 3k6s_B          474 SCRKDNNSIICSGLGDCVC-------GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-GKCRCHPG  545 (687)
T ss_dssp             TTSSSTTSCGGGSSEEEET-------TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET-TEEEECTT
T ss_pred             CCCCCCCCCcCCCCCEEeC-------CEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC-CEEEcCCC
Confidence            46543    376 689984       289999      999999998 3566763   4676   356764 47899998


Q ss_pred             CcccccccCC-C--CcCCCCCCC---CcC-CCeeecCCCCceeeecCCCCcCCCCCCcccccccCCcccccc
Q 027951          104 PAQEKAAKKN-E--SIFDLCRWI---DCG-GGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCK  168 (216)
Q Consensus       104 ~~~~~~~~~n-~--s~~DPC~~~---~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t~~pC~~~CslG~dC~  168 (216)
                      |     ++.+ +  ...+.|...   .|. +|+|+.     ++|.|++||+|..-..-..|...|+-+..|.
T Consensus       546 ~-----~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~-----g~C~C~~Gy~G~~Ce~c~~C~~~C~~~g~Cv  607 (687)
T 3k6s_B          546 F-----EGSACQCERTTEGCLNPRRVECSGRGRCRC-----NVCECHSGYQLPLCQECPGCPSPCGKYISCA  607 (687)
T ss_dssp             C-----CSTTSCSCCSSCTTBCTTCSBTSSSCCBCS-----SCBCCSTTCCTTTTCCCTTSCCCCTTTHHHH
T ss_pred             C-----cCCCCccCCCCCCCCCCCCCCCCCCCcCCC-----CEEECCCCCcCCCCCCCCCCCcccCCCCCCC
Confidence            8     4555 3  234788754   797 899986     4799999999998655345666676666554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.41  E-value=4.1e-08  Score=87.67  Aligned_cols=65  Identities=23%  Similarity=0.546  Sum_probs=15.7

Q ss_pred             CCCccCC--CCCCeeeccCCCCCcceeecCCCCc----cCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCC
Q 027951           41 NVCDKVT--CGKGKCKASQNSTFFYECECDLGWK----QNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNE  114 (216)
Q Consensus        41 ~~C~~~~--Cg~GtC~~~~~~~~~Y~C~C~pGwt----g~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~  114 (216)
                      +.|...+  |++ +|...   ..+|+|.|.+||+    |..|+                                     
T Consensus         4 ~~C~~~~~~c~~-~C~~~---~g~~~C~C~~G~~l~~~~~~C~-------------------------------------   42 (386)
T 3v65_B            4 ENCNVNNGGCAQ-KCQMI---RGAVQCTCHTGYRLTEDGRTCQ-------------------------------------   42 (386)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CcccCCCCCCCC-CCcCC---CCCcEeECCCCceECCCCCccC-------------------------------------
Confidence            5788776  554 89654   5579999999999    55543                                     


Q ss_pred             CcCCCCC-CCCcCCCeeecCCCCceeeecCCCCcCC
Q 027951          115 SIFDLCR-WIDCGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       115 s~~DPC~-~~~CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                       +.|+|. ..+|.++ |++.. ++|+|.|.+||...
T Consensus        43 -d~~eC~~~~~C~~~-C~~~~-g~~~C~C~~g~~l~   75 (386)
T 3v65_B           43 -DVNECAEEGYCSQG-CTNSE-GAFQCWCEAGYELR   75 (386)
T ss_dssp             ----------CCTTE-EC------CCEECCTTEEEC
T ss_pred             -ccceeCCcCcccCc-CCCCC-CCCeEEECCCceEc
Confidence             236675 4567754 99875 79999999999843

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.35  E-value=4.7e-08  Score=91.24  Aligned_cols=28  Identities=25%  Similarity=0.590  Sum_probs=1.6

Q ss_pred             CCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          118 DLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      +.|.. +|. +|+|++.    |+|+|.+||+|..
T Consensus       424 ~~C~~-~C~~~g~C~~~----~~C~C~~G~~G~~  452 (463)
T 2wg3_C          424 AKCEP-ACRHGGVCVRP----NKCLCKKGYLGPQ  452 (463)
T ss_dssp             ECC-------------------------------
T ss_pred             CcCCC-CCCCCCEECCC----CEEECCCCcccCC
Confidence            45665 787 7899974    7999999999875

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=98.33  E-value=2.9e-07  Score=60.98  Aligned_cols=37  Identities=19%  Similarity=0.442  Sum_probs=30.5

Q ss_pred             cCCCcc---CCCCCCeeeccCCCCCcceeecCCCCccCccc
Q 027951           40 ENVCDK---VTCGKGKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        40 ~~~C~~---~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      .+.|..   .+|.||+|+...+ ..+|+|+|.+||+|.+|+
T Consensus         3 i~~C~~~~~~pC~nG~C~~~~~-~~~~~C~C~~GytG~~Ce   42 (46)
T 1k36_A            3 ITKCSSDMNGYCLHGQCIYLVD-MSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             EECCCTTCCSSCSSEEEEEETT-TTEEEEEECTTCSSTTSC
T ss_pred             cccCCCCCCCCCCCCEeeccCC-CCCEEEECCCCCccCCCC
Confidence            357887   8999999997522 358999999999999976

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.25  E-value=9.6e-07  Score=81.84  Aligned_cols=31  Identities=26%  Similarity=0.428  Sum_probs=22.7

Q ss_pred             CCCC-CCcC-CCeeecCCCCceeeecCCCCcCCCCC
Q 027951          119 LCRW-IDCG-GGSCKNTSMFSYSCQCAVDHYNLLNT  152 (216)
Q Consensus       119 PC~~-~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~  152 (216)
                      +|.. ..|. +|+|..   ++|+|.|++||+|..-.
T Consensus       245 ~C~~~~~C~~~g~C~~---~~~~C~C~~G~~G~~C~  277 (423)
T 2gy5_A          245 RCSGQEGCKSYVFCLP---DPYGCSCATGWKGLQCN  277 (423)
T ss_dssp             ECCSTTTTTTCCEEET---TTTEEECCBTCBSGGGC
T ss_pred             cCCCCCCCCCCCEECC---CCCeEEeCCCccccccc
Confidence            4542 4577 678864   47999999999998644

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.24  E-value=3.3e-07  Score=78.43  Aligned_cols=91  Identities=24%  Similarity=0.407  Sum_probs=63.4

Q ss_pred             CCC-CCeeeccCCCCCcceeecCCCCccCcccc-cC---------CCc----cCCcc-CCCCCCCCCCCCCCCCccccc-
Q 027951           47 TCG-KGKCKASQNSTFFYECECDLGWKQNTMAV-DQ---------NLK----FLPCI-APDCTLNQDCAPSPSPAQEKA-  109 (216)
Q Consensus        47 ~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~-~d---------~~~----~lPC~-ipnCt~n~sC~~~~~~~~~~~-  109 (216)
                      .|. ||+|+.       .+|+|++||+|.+|+- .+         .|.    ..||. ++.|. +..|.+.++|.+.+. 
T Consensus        97 ~Csg~G~C~~-------g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~-~g~C~C~~gw~~~~~~  168 (217)
T 2p28_B           97 LCHGKGFLEC-------GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-CGQCLCHTSDVPGKLI  168 (217)
T ss_dssp             TTTTSEEEET-------TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEE-TTEEEECCCCSTTCCE
T ss_pred             ccCCCceEEC-------CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEe-CCceECCCCCCCcccE
Confidence            465 789974       4799999999999983 22         243    24565 34665 457888888743221 


Q ss_pred             ccCC-CCcCCCCCCC---CcC-C--CeeecCCCCceeeecCCCCcCCC
Q 027951          110 AKKN-ESIFDLCRWI---DCG-G--GSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       110 ~~~n-~s~~DPC~~~---~Cg-g--GtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++.+ +.+.+.|...   .|. +  |+|+.     .+|+|.+||+|..
T Consensus       169 ~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~-----g~C~C~~G~~G~~  211 (217)
T 2p28_B          169 YGQYCECDTINCERYNGQVCGGPGRGLCFC-----GKCRCHPGFEGSA  211 (217)
T ss_dssp             ESTTSCEESSCSCEETTEETTCTTTEEEET-----TEEEECTTEESTT
T ss_pred             ECCCcccCCccCCCCCCCCCCCCCCcEEeC-----CeeECCCCCccCC
Confidence            4555 5445678765   797 6  99995     2899999999974

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.22  E-value=1e-06  Score=55.26  Aligned_cols=34  Identities=35%  Similarity=0.561  Sum_probs=29.4

Q ss_pred             cCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++|+|..++|. +|+|++.. ++|+|.|++||+|..
T Consensus         2 d~d~C~~~pC~ngg~C~~~~-~~~~C~C~~G~~G~~   36 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDI-NSYECWCPFGFEGKN   36 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEET-TEEEEECCTTCCSTT
T ss_pred             ccccCCCCCCCCCCEeEcCC-CceEeECCCCCcCCc
Confidence            35899999998 78999865 789999999999864

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.19  E-value=1.1e-06  Score=55.13  Aligned_cols=35  Identities=29%  Similarity=0.736  Sum_probs=30.1

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      .+.|+..+|.+ |+|++.   ..+|+|+|.+||+|.+|+
T Consensus         3 ~d~C~~~pC~ngg~C~~~---~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            3 GDQCESNPCLNGGSCKDD---INSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEE---TTEEEEECCTTCCSTTSC
T ss_pred             cccCCCCCCCCCCEeEcC---CCceEeECCCCCcCCccC
Confidence            46899999997 699987   568999999999999864

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.13  E-value=4.7e-07  Score=63.68  Aligned_cols=36  Identities=25%  Similarity=0.633  Sum_probs=31.2

Q ss_pred             cCCCccCCCCCC---eeeccCCCCCcceeecCCCCc-cCcccc
Q 027951           40 ENVCDKVTCGKG---KCKASQNSTFFYECECDLGWK-QNTMAV   78 (216)
Q Consensus        40 ~~~C~~~~Cg~G---tC~~~~~~~~~Y~C~C~pGwt-g~~c~~   78 (216)
                      .+.|...||++|   +|++.   ..+|+|+|.+||+ |.+|++
T Consensus        11 ~d~C~snPC~nga~gtC~~~---~g~y~C~C~~Gy~~G~~C~~   50 (61)
T 2k2s_B           11 PAACSSNPCGPEAAGTCKET---NSGYICRCNQGYRISLDGTG   50 (61)
T ss_dssp             CCHHHHCSSCSSSCCEEEEC---SSEEEEECCTTEEEEECSSS
T ss_pred             CCcCcCCCCcCCCccccccC---CCceEeECCCCCccCCCCCC
Confidence            468999999985   99987   6689999999999 998764

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.12  E-value=1.4e-06  Score=60.06  Aligned_cols=39  Identities=18%  Similarity=0.364  Sum_probs=30.8

Q ss_pred             cCCCccCCCCC-CeeeccC--CCCCcceeecCCCCccCcccc
Q 027951           40 ENVCDKVTCGK-GKCKASQ--NSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~--~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      -+.|++.+|+| |+|++..  +...+|+|+|.+||+|.+|+.
T Consensus         8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~   49 (55)
T 3u7u_G            8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQN   49 (55)
T ss_dssp             CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred             CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence            36899999997 5996532  225689999999999999873

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=98.12  E-value=9.9e-07  Score=61.15  Aligned_cols=43  Identities=19%  Similarity=0.346  Sum_probs=32.5

Q ss_pred             CCCccCCCCC-CeeeccC--CCCCcceeecCCCCccCccc-ccCCCc
Q 027951           41 NVCDKVTCGK-GKCKASQ--NSTFFYECECDLGWKQNTMA-VDQNLK   83 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~--~~~~~Y~C~C~pGwtg~~c~-~~d~~~   83 (216)
                      +.|...+|.| |+|+...  +...+|+|+|.+||+|.+|+ +++++.
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~   53 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKV   53 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSC
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCccc
Confidence            5788899997 6999721  12568999999999999987 344443

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.08  E-value=1.7e-06  Score=85.04  Aligned_cols=105  Identities=25%  Similarity=0.399  Sum_probs=69.2

Q ss_pred             CCCC-CCeeeccCCCCCcceeecCCCCccCcccc-cC---------CCccC----Ccc-CCCCCCCCCCCCC------CC
Q 027951           46 VTCG-KGKCKASQNSTFFYECECDLGWKQNTMAV-DQ---------NLKFL----PCI-APDCTLNQDCAPS------PS  103 (216)
Q Consensus        46 ~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~-~d---------~~~~l----PC~-ipnCt~n~sC~~~------~~  103 (216)
                      ..|. +|+|..       .+|+|++||+|.+|+. .+         +|...    +|. ++.|. +..|.+.      ++
T Consensus       435 ~~Cs~~G~C~~-------g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~G~C~C~~~~~~~~G  506 (687)
T 3k6s_B          435 SLCHGKGFLEC-------GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-CGQCLCHTSDVPGKL  506 (687)
T ss_dssp             STGGGSEEESS-------SSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE-TTEEEECCCCSTTCC
T ss_pred             CCCCCCCEEeC-------CEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe-CCEEEcCCCCCCCCC
Confidence            3463 678862       4799999999999982 22         35432    355 23565 3477777      55


Q ss_pred             CcccccccCC-CCcCCCCCC---CCcC---CCeeecCCCCceeeecCCCCcCCCCC---Ccccccc----cCCcccccc
Q 027951          104 PAQEKAAKKN-ESIFDLCRW---IDCG---GGSCKNTSMFSYSCQCAVDHYNLLNT---STFPCYK----ECSIGMDCK  168 (216)
Q Consensus       104 ~~~~~~~~~n-~s~~DPC~~---~~Cg---gGtCv~~~~~sY~C~C~~Gy~nlln~---t~~pC~~----~CslG~dC~  168 (216)
                      |     ++.+ +...+.|..   ..|+   +|+|+.     .+|.|++||+|..-.   ....|..    .|+-+..|.
T Consensus       507 ~-----~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~-----g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~  575 (687)
T 3k6s_B          507 I-----YGQYCECDTINCERYNGQVCGGPGRGLCFC-----GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCR  575 (687)
T ss_dssp             E-----ESTTSCEESSCSCEETTEETSHHHHEEEET-----TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBC
T ss_pred             c-----cccccccccccccCCCCcCcCCCCCCeEEC-----CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCC
Confidence            5     4555 434577874   4687   589985     289999999999754   2467774    365555554

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.02  E-value=4.7e-06  Score=80.64  Aligned_cols=99  Identities=17%  Similarity=0.249  Sum_probs=65.8

Q ss_pred             CCCCCCeeeccCCCCCcceeecCCCC--ccCcccccCCCccC--CccCCCCCC---CCCCCCCCCCcccccccCCCCcCC
Q 027951           46 VTCGKGKCKASQNSTFFYECECDLGW--KQNTMAVDQNLKFL--PCIAPDCTL---NQDCAPSPSPAQEKAAKKNESIFD  118 (216)
Q Consensus        46 ~~Cg~GtC~~~~~~~~~Y~C~C~pGw--tg~~c~~~d~~~~l--PC~ipnCt~---n~sC~~~~~~~~~~~~~~n~s~~D  118 (216)
                      ..|.+|+|++... .-.+.+.|..|+  ....|+ +++|...  +|. ..|.+   .|.|.+.+++.-  ..++.=.++|
T Consensus       261 ~~C~~g~Ci~~~~-~Cd~~~dC~dgsDe~~~~C~-~~eC~~~~~~C~-~~C~~~~~~~~C~C~~G~~~--~~~~~C~did  335 (699)
T 1n7d_A          261 FKCHSGECITLDK-VCNMARDCRDWSDEPIKECG-TNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL--VAQRRCEDID  335 (699)
T ss_dssp             CCCTTSCCCCSSC-CSCSSCCSSSSCSCCCSSCC-CCCTTSSTTTSC-TTCCCCTTCCCCCCCSSSCC--CSSSCCCCCC
T ss_pred             eecCCCcEeCCcc-cccccceecCcccccccccc-cccccccccCcC-CCcccCCCCcEEeCCCCeEc--CCCCcccCcc
Confidence            5788899988753 335778888775  234453 4455443  343 25655   588888888842  1133312568


Q ss_pred             CCC-CCCcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951          119 LCR-WIDCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       119 PC~-~~~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      +|. ...|. .+|+++. ++|+|.|.+||.+..+
T Consensus       336 eC~~~~~C~-~~C~n~~-g~y~C~C~~G~~~~~~  367 (699)
T 1n7d_A          336 ECQDPDTCS-QLCVNLE-GGYKCQCEEGFQLDPH  367 (699)
T ss_dssp             CCSSSSSCT-TTCCBCS-SCBCCCCCSSCBCCSS
T ss_pred             ccCCCCccc-cccccCC-CCeeeeeecccccCCC
Confidence            997 46786 4899975 8999999999997654

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.01  E-value=2.6e-06  Score=58.74  Aligned_cols=36  Identities=19%  Similarity=0.270  Sum_probs=29.1

Q ss_pred             cCCCCCCCCcC-CCeeec----CCCCceeeecCCCCcCCCC
Q 027951          116 IFDLCRWIDCG-GGSCKN----TSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~----~~~~sY~C~C~~Gy~nlln  151 (216)
                      ..|+|..++|. +|+|+.    ....+|+|.|.+||+|..-
T Consensus         7 ~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~C   47 (55)
T 3u7u_G            7 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRC   47 (55)
T ss_dssp             ECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTS
T ss_pred             cCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCc
Confidence            46899999999 899953    1246899999999999874

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.01  E-value=1.1e-06  Score=68.62  Aligned_cols=85  Identities=21%  Similarity=0.394  Sum_probs=57.4

Q ss_pred             CCccCC-CCCCCCCCCCCCCCcccc----cccCCCCcCCCCCCC---CcC-CCeeecCCCCceeeecCCCCcCCCC----
Q 027951           85 LPCIAP-DCTLNQDCAPSPSPAQEK----AAKKNESIFDLCRWI---DCG-GGSCKNTSMFSYSCQCAVDHYNLLN----  151 (216)
Q Consensus        85 lPC~ip-nCt~n~sC~~~~~~~~~~----~~~~n~s~~DPC~~~---~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln----  151 (216)
                      .||... .|+..|.|.+.++|.-..    ..++.=.++|+|...   +|+ +++|++.. ++|+|+|++||++...    
T Consensus         7 ~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~-g~y~C~C~~Gy~g~~~~~~~   85 (143)
T 2bou_A            7 RWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTE-GSYDCVCSPGYEPVSGAKTF   85 (143)
T ss_dssp             TTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECS-SCEEEEECTTEEETTCCSCB
T ss_pred             CcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCC-CCeEeECCCCcccCcCcccc
Confidence            357643 788889999999984210    011221246899875   898 78999975 7999999999998732    


Q ss_pred             --------CCccccc---ccCCcccccccC
Q 027951          152 --------TSTFPCY---KECSIGMDCKNM  170 (216)
Q Consensus       152 --------~t~~pC~---~~CslG~dC~~l  170 (216)
                              ....+|.   ..|.-++.|.++
T Consensus        86 ~~~~~~~C~dideC~~~~~~C~~~~~C~n~  115 (143)
T 2bou_A           86 KNESENTCQDVDECSSGQHQCDSSTVCFNT  115 (143)
T ss_dssp             SSGGGCCEEECCHHHHTCCCCCTTSEEEEC
T ss_pred             ccCCCCCcCCccCccCcCCCCCCCCEEECC
Confidence                    2345565   357666777654

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.98  E-value=4.4e-06  Score=54.38  Aligned_cols=35  Identities=20%  Similarity=0.374  Sum_probs=27.4

Q ss_pred             CCccC---CCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           42 VCDKV---TCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        42 ~C~~~---~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      .|...   +|.| |+|+... ...+|+|+|.+||+|.+|+
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~-~~~~~~C~C~~G~~G~~Ce   40 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIE-SLDSYTCNCVIGYSGDRCQ   40 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECT-TTSSEEEECCTTEETTTTC
T ss_pred             CcccCCCCCCCCCCEEEeec-CCCCEEEEcCCCCcCCcCC
Confidence            46666   8997 6998421 1568999999999999986

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.93  E-value=1.9e-06  Score=60.56  Aligned_cols=35  Identities=31%  Similarity=0.636  Sum_probs=29.7

Q ss_pred             cCCCCCCCCcC-C--CeeecCCCCceeeecCCCCc-CCCC
Q 027951          116 IFDLCRWIDCG-G--GSCKNTSMFSYSCQCAVDHY-NLLN  151 (216)
Q Consensus       116 ~~DPC~~~~Cg-g--GtCv~~~~~sY~C~C~~Gy~-nlln  151 (216)
                      ..|+|..++|. +  |+|++.. ++|+|.|++||+ |..-
T Consensus        10 ~~d~C~snPC~nga~gtC~~~~-g~y~C~C~~Gy~~G~~C   48 (61)
T 2k2s_B           10 TPAACSSNPCGPEAAGTCKETN-SGYICRCNQGYRISLDG   48 (61)
T ss_dssp             SCCHHHHCSSCSSSCCEEEECS-SEEEEECCTTEEEEECS
T ss_pred             CCCcCcCCCCcCCCccccccCC-CceEeECCCCCccCCCC
Confidence            35899999998 5  7999975 789999999999 8653

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.89  E-value=8.8e-06  Score=80.57  Aligned_cols=33  Identities=27%  Similarity=0.408  Sum_probs=24.4

Q ss_pred             cCCCCCC-CCcCCCeeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCRW-IDCGGGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~~-~~CggGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++|+|.. ..|+ ++|++.. ++|+|.|.+||....
T Consensus       351 dideC~~~~~C~-~~C~n~~-gsy~C~C~~Gy~l~~  384 (791)
T 3m0c_C          351 DIDECQDPDTCS-QLCVNLE-GGYKCQCEEGFQLDP  384 (791)
T ss_dssp             CCCCCSSSSSCT-TTCCBCS-SCBCCCCCSSEECCS
T ss_pred             cCcccCCCCCCC-CeeecCC-CCceeecCCCCEeCC
Confidence            3577762 3464 4899975 899999999998643

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.86  E-value=1.1e-05  Score=54.17  Aligned_cols=33  Identities=27%  Similarity=0.620  Sum_probs=27.7

Q ss_pred             CCCCCCC---CcC-CCeee--cCCCCceeeecCCCCcCCC
Q 027951          117 FDLCRWI---DCG-GGSCK--NTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       117 ~DPC~~~---~Cg-gGtCv--~~~~~sY~C~C~~Gy~nll  150 (216)
                      +|+|...   +|. +|+|+  +. .++|+|.|.+||+|..
T Consensus         3 i~~C~~~~~~pC~ngg~C~~~~~-~~~~~C~C~~G~~G~~   41 (53)
T 1egf_A            3 YPGCPSSYDGYCLNGGVCMHIES-LDSYTCNCVIGYSGDR   41 (53)
T ss_dssp             ECCCCTTSSCSSCSSCEEEEESS-SSCEEEECCTTCCSSS
T ss_pred             cccCCCCCCCcCCCCcEEEeeCC-CCCEEEECCCCCcCCc
Confidence            5788876   898 78999  54 4789999999999975

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.85  E-value=1.2e-05  Score=54.04  Aligned_cols=36  Identities=25%  Similarity=0.571  Sum_probs=28.4

Q ss_pred             CCCccC---CCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           41 NVCDKV---TCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        41 ~~C~~~---~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      +.|...   +|.| |+|+... ...+|+|.|.+||+|.+|+
T Consensus         4 ~~C~~~~~~pC~ngg~C~~~~-~~~~~~C~C~~G~~G~~Ce   43 (53)
T 1egf_A            4 PGCPSSYDGYCLNGGVCMHIE-SLDSYTCNCVIGYSGDRCQ   43 (53)
T ss_dssp             CCCCTTSSCSSCSSCEEEEES-SSSCEEEECCTTCCSSSSC
T ss_pred             ccCCCCCCCcCCCCcEEEeeC-CCCCEEEECCCCCcCCcCC
Confidence            467776   9998 6999421 1568999999999999976

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=97.81  E-value=6.2e-06  Score=59.75  Aligned_cols=53  Identities=30%  Similarity=0.628  Sum_probs=37.9

Q ss_pred             cCCCCCCCC--cCCCeeecCCCCceeeecCCCCcC-----CCCCCccccccc---CCcccccccC
Q 027951          116 IFDLCRWID--CGGGSCKNTSMFSYSCQCAVDHYN-----LLNTSTFPCYKE---CSIGMDCKNM  170 (216)
Q Consensus       116 ~~DPC~~~~--CggGtCv~~~~~sY~C~C~~Gy~n-----lln~t~~pC~~~---CslG~dC~~l  170 (216)
                      ++|+|...+  |.+|+|++.. ++|+|.|++||++     ..-....+|...   |. ++.|.+.
T Consensus         2 dideC~~~~~~C~~g~C~n~~-g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~   64 (86)
T 1lmj_A            2 DIDECRISPDLCGRGQCVNTP-GDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNT   64 (86)
T ss_dssp             CCCTTTTCSSTTTTSCEEEET-TEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEE
T ss_pred             ccccccCCCCCCCCCEEECCC-CCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcC
Confidence            458898765  9888999976 7999999999983     333455666632   54 4566654

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.75  E-value=1.2e-05  Score=53.13  Aligned_cols=34  Identities=24%  Similarity=0.394  Sum_probs=28.2

Q ss_pred             CCCCCC---CCcCCCeeecCC-CCceeeecCCCCcCCC
Q 027951          117 FDLCRW---IDCGGGSCKNTS-MFSYSCQCAVDHYNLL  150 (216)
Q Consensus       117 ~DPC~~---~~CggGtCv~~~-~~sY~C~C~~Gy~nll  150 (216)
                      +|+|..   ++|.+|+|+... .++|+|+|.+||+|..
T Consensus         3 i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~GytG~~   40 (46)
T 1k36_A            3 ITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVR   40 (46)
T ss_dssp             EECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCSSTT
T ss_pred             cccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCccCC
Confidence            478887   899989998743 3689999999999975

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=97.74  E-value=1.3e-05  Score=78.23  Aligned_cols=89  Identities=18%  Similarity=0.360  Sum_probs=64.4

Q ss_pred             ccCCCccCCccCC-CCCC---C-CCC-CCCCCCcccccccCCCCcCCCCCCCC--cC-CC---eeecCCCCceeee-cCC
Q 027951           78 VDQNLKFLPCIAP-DCTL---N-QDC-APSPSPAQEKAAKKNESIFDLCRWID--CG-GG---SCKNTSMFSYSCQ-CAV  144 (216)
Q Consensus        78 ~~d~~~~lPC~ip-nCt~---n-~sC-~~~~~~~~~~~~~~n~s~~DPC~~~~--Cg-gG---tCv~~~~~sY~C~-C~~  144 (216)
                      ++++|...||.+. .|+.   . |.| .|.+++.-   .++.=..+|+|...+  |. ++   +|++.. ++|+|. |++
T Consensus         2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytG---dg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~-gsY~C~~C~~   77 (634)
T 1yo8_A            2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLG---NGTHCEDLDECALVPDICFSTSKVPRCVNTQ-PGFHCLPCPP   77 (634)
T ss_dssp             --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCS---CSSSCCBCCTTTTSCCCSCCCSSSCCEEECS-SSEEECCCCT
T ss_pred             cccccCCCCCCCCCEEecCCCCCeECCcCCCccCC---CCCCccccccccCCCCcccCCccccceeecc-CceecccCCC
Confidence            3678888999865 8975   2 789 89999831   123312569999877  99 56   899975 799999 999


Q ss_pred             CCcCCCC---------------CCcccccc---cCCcccccccC
Q 027951          145 DHYNLLN---------------TSTFPCYK---ECSIGMDCKNM  170 (216)
Q Consensus       145 Gy~nlln---------------~t~~pC~~---~CslG~dC~~l  170 (216)
                      ||+|..-               ....+|..   .|.-++.|.++
T Consensus        78 Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt  121 (634)
T 1yo8_A           78 RYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYL  121 (634)
T ss_dssp             TEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEEC
T ss_pred             CcccCccccccccccccCCCcccccccccCCCcccccCcccccc
Confidence            9998752               23566763   57777778765

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=97.74  E-value=1.7e-05  Score=57.18  Aligned_cols=53  Identities=34%  Similarity=0.619  Sum_probs=37.5

Q ss_pred             cCCCCCC-CCcCCCeeecCCCCceeeecCCCCc--CCCCCCccccc--ccCCcccccccC
Q 027951          116 IFDLCRW-IDCGGGSCKNTSMFSYSCQCAVDHY--NLLNTSTFPCY--KECSIGMDCKNM  170 (216)
Q Consensus       116 ~~DPC~~-~~CggGtCv~~~~~sY~C~C~~Gy~--nlln~t~~pC~--~~CslG~dC~~l  170 (216)
                      ++|+|.. ++|.+|+|++.. ++|+|.|++||.  |..-....+|.  ..|.-| .|.+.
T Consensus         4 dideC~~~~~C~~g~C~n~~-g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~~-~C~n~   61 (82)
T 1emn_A            4 DMDECKEPDVCKHGQCINTD-GSYRCECPFGYILAGNECVDTDECSVGNPCGNG-TCKNV   61 (82)
T ss_dssp             CCCSSSSTTSCSSSEECCCS-SCCCEECCTTEEEETTEEEECCGGGTCCTTSSS-CEEEC
T ss_pred             ccccCCCCCCcCCCEEEecC-CCEEEECCCCeECCCCccCCcccccCCCCCCCC-EeECC
Confidence            3588986 789889999975 799999999997  55444455564  345433 55543

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=97.72  E-value=1.2e-05  Score=59.30  Aligned_cols=59  Identities=12%  Similarity=0.098  Sum_probs=43.9

Q ss_pred             CCCccCCCCCCeeeccCCCCCcceeecCCCCccCccc--ccCCCccCCccCC-CCC-----CCCCCCCCCCC
Q 027951           41 NVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMA--VDQNLKFLPCIAP-DCT-----LNQDCAPSPSP  104 (216)
Q Consensus        41 ~~C~~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~--~~d~~~~lPC~ip-nCt-----~n~sC~~~~~~  104 (216)
                      ..|+..+|....|+..   ..+|+|+|.+||+  +|+  ++++|...||.++ .|.     ..|.|.+.++|
T Consensus        13 ~~c~~~~c~~~pC~n~---~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~   79 (91)
T 1tpg_A           13 MIYQQHQSWLRPVLRS---NRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGF   79 (91)
T ss_dssp             CBCCSSCEEEEECSSS---SCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTC
T ss_pred             CeECCCcccCCccccC---CCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCC
Confidence            3455455555556554   5589999999998  786  4789999999975 787     35788888887

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=97.69  E-value=1.7e-05  Score=60.76  Aligned_cols=45  Identities=24%  Similarity=0.502  Sum_probs=27.0

Q ss_pred             cCCCCCCCCcCCCeeecCCCCceeeecCCCCcCCCCCCcccccccCC
Q 027951          116 IFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECS  162 (216)
Q Consensus       116 ~~DPC~~~~CggGtCv~~~~~sY~C~C~~Gy~nlln~t~~pC~~~Cs  162 (216)
                      ++|+|..++|++ +|++...++|+|+|++||+|... ....|..+|.
T Consensus         3 dideC~~~pC~~-~C~~~~~g~y~C~C~~Gy~g~~~-~~~~C~~~C~   47 (118)
T 1dx5_I            3 PVDPCFRANCEY-QCQPLDQTSYLCVCAEGFAPIPH-EPHRCQMFCN   47 (118)
T ss_dssp             CCCGGGGCCCSS-EEEECSSSCEEEECCTTEEEETT-EEEEEEECCC
T ss_pred             ccccCCCCCCCC-CCCCCCCCCEEeECCCCccccCC-CCCccccccC
Confidence            346776667764 77775235677777777776632 3344554444

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.69  E-value=2.8e-05  Score=50.50  Aligned_cols=32  Identities=25%  Similarity=0.361  Sum_probs=24.9

Q ss_pred             CCCCC---CcC-CCeeec-CCCCceeeecCCCCcCCC
Q 027951          119 LCRWI---DCG-GGSCKN-TSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       119 PC~~~---~Cg-gGtCv~-~~~~sY~C~C~~Gy~nll  150 (216)
                      +|...   +|. +|+|+. ...++|+|.|.+||+|..
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~   38 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDR   38 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTT
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCc
Confidence            56665   887 789983 234789999999999875

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.58  E-value=4.5e-05  Score=71.49  Aligned_cols=96  Identities=23%  Similarity=0.477  Sum_probs=29.7

Q ss_pred             CeeeccCCCCCcceeecCCCCccCcccc-cCCCccCCccCCCC-----CCCCCCCCCCCCcccccccCCCCcCCCCCC--
Q 027951           51 GKCKASQNSTFFYECECDLGWKQNTMAV-DQNLKFLPCIAPDC-----TLNQDCAPSPSPAQEKAAKKNESIFDLCRW--  122 (216)
Q Consensus        51 GtC~~~~~~~~~Y~C~C~pGwtg~~c~~-~d~~~~lPC~ipnC-----t~n~sC~~~~~~~~~~~~~~n~s~~DPC~~--  122 (216)
                      .+|.+.   ...++|+|++||+|..|+. .+..--.|+..+.+     ...+.|..-...         . ..+.|+.  
T Consensus       304 s~C~~~---~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn---------~-~g~~CD~~t  370 (426)
T 3zyj_B          304 TVCVYD---NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISS---------I-GTNVCDNEL  370 (426)
T ss_dssp             SCEEEE---TTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------------
T ss_pred             hhcCCC---CCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCC---------C-CcCccccCc
Confidence            389876   3469999999999999985 33343456664432     112233221111         0 0123432  


Q ss_pred             CCcC-CCeeecCCCCceeeecCCCCcCCCCCCccccc-ccCCccccccc
Q 027951          123 IDCG-GGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCY-KECSIGMDCKN  169 (216)
Q Consensus       123 ~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t~~pC~-~~CslG~dC~~  169 (216)
                      .+|+ +|+|+++.    +|+|++||+|..      |- -.|+-|..|..
T Consensus       371 ~~C~ngg~C~~~~----~C~C~~G~~G~~------Ce~c~C~~~g~C~~  409 (426)
T 3zyj_B          371 LHCQNGGTCHNNV----RCLCPAAYTGIL------CEKLRCEEAGSCGS  409 (426)
T ss_dssp             -------------------------------------------------
T ss_pred             ccCCCCCCcCCCC----CCcCCCCCcCCC------CcCCCCCCCCcccC
Confidence            4687 78999853    999999999976      44 35666666643

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.58  E-value=2.1e-05  Score=61.88  Aligned_cols=38  Identities=24%  Similarity=0.585  Sum_probs=29.8

Q ss_pred             CCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccccCCC
Q 027951           42 VCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAVDQNL   82 (216)
Q Consensus        42 ~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~   82 (216)
                      .|...+|.+ |+|++.   ..+|.|+|.+||+|.+|+.+++|
T Consensus       121 ~c~~~~C~~~g~C~~~---~~~~~c~C~~g~~G~~Ce~~~~c  159 (162)
T 1g1s_A          121 SCQDMSCSKQGECLET---IGNYTCSCYPGFYGPECEYVRDD  159 (162)
T ss_dssp             CCCTTGGGGSEEEEEC---SSSEEEEECTTEESTTSCEECC-
T ss_pred             CCcCCCCCCCCEEecC---CCCceEeCCCCCcCcccccCccc
Confidence            455667875 799987   56899999999999998865444

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.55  E-value=1.8e-05  Score=54.76  Aligned_cols=34  Identities=21%  Similarity=0.315  Sum_probs=27.9

Q ss_pred             CCCCCCCcC-CCeeec----CCCCceeeecCCCCcCCCC
Q 027951          118 DLCRWIDCG-GGSCKN----TSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~----~~~~sY~C~C~~Gy~nlln  151 (216)
                      |+|..++|. +|+|++    ...++|+|.|.+||+|..-
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~C   45 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARC   45 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTS
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCcc
Confidence            678888998 789996    2346899999999998763

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=97.52  E-value=4.7e-05  Score=60.64  Aligned_cols=42  Identities=31%  Similarity=0.460  Sum_probs=32.7

Q ss_pred             cCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCCCCccccc
Q 027951          116 IFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCY  158 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t~~pC~  158 (216)
                      ++|+|..++|. +|+|++.. ++|+|.|++||+|..-....+|.
T Consensus        47 dideC~~~pC~n~g~C~~~~-~~y~C~C~~G~~G~~C~~~deC~   89 (146)
T 1x7a_L           47 DGDQCEPNPCLNGGLCKDDI-NSYECWCQVGFEGKNCELDATCN   89 (146)
T ss_dssp             ---CCSSCSSCTTCEEEECS-SCEEEECCSSEESTTTCEECCTT
T ss_pred             CcCcCCCCCCCCCCEeECCC-CCEEEecCCCCcCCcCCCCcccc
Confidence            46899999999 68999975 78999999999998755555554

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=97.51  E-value=3.6e-05  Score=55.88  Aligned_cols=52  Identities=25%  Similarity=0.512  Sum_probs=36.5

Q ss_pred             cCCCCCCCC--cCCCeeecCCCCceeeecCCCCc----CCCCCCccccc-ccCCcccccccC
Q 027951          116 IFDLCRWID--CGGGSCKNTSMFSYSCQCAVDHY----NLLNTSTFPCY-KECSIGMDCKNM  170 (216)
Q Consensus       116 ~~DPC~~~~--CggGtCv~~~~~sY~C~C~~Gy~----nlln~t~~pC~-~~CslG~dC~~l  170 (216)
                      ++|+|...+  |.+|+|++.. ++|+|+|++||+    |..-....+|. ..|.  ..|.+.
T Consensus         2 dideC~~~~~~C~~~~C~n~~-g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~   60 (87)
T 1z6c_A            2 DVDECSLKPSICGTAVCKNIP-GDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNY   60 (87)
T ss_dssp             CSCSSSSSSSSBTTSSCCCBT-TBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCC
T ss_pred             ccccccCCCCCCCCCEeECCC-CCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEcc
Confidence            358898877  8778999976 799999999999    44334555665 3354  345443

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=97.47  E-value=0.0002  Score=66.25  Aligned_cols=66  Identities=26%  Similarity=0.576  Sum_probs=42.0

Q ss_pred             CCCC-CeeeccCCCCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCC-CC
Q 027951           47 TCGK-GKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLCRW-ID  124 (216)
Q Consensus        47 ~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~DPC~~-~~  124 (216)
                      .|.+ |+|.+     ..|+|.|.+||+|.+|+.            .|.        +++     .+      +.|.. -.
T Consensus       251 ~C~~~g~C~~-----~~~~C~C~~G~~G~~C~~------------~C~--------~G~-----~G------~~C~~~C~  294 (423)
T 2gy5_A          251 GCKSYVFCLP-----DPYGCSCATGWKGLQCNE------------ACH--------PGF-----YG------PDCKLRCS  294 (423)
T ss_dssp             TTTTCCEEET-----TTTEEECCBTCBSGGGCB------------CCC--------TTB-----CS------BTTCCBCC
T ss_pred             CCCCCCEECC-----CCCeEEeCCCcccccccC------------ccC--------CCC-----cC------Cccccccc
Confidence            4553 56743     369999999999998752            121        122     11      12321 15


Q ss_pred             cC-CCeeecCCCCceeeecCCCCcCCCCC
Q 027951          125 CG-GGSCKNTSMFSYSCQCAVDHYNLLNT  152 (216)
Q Consensus       125 Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~  152 (216)
                      |. +|+|.+.    +.|.|++||+|..-.
T Consensus       295 C~ngg~C~~~----~~C~C~~G~~G~~Ce  319 (423)
T 2gy5_A          295 CNNGEMCDRF----QGCLCSPGWQGLQCE  319 (423)
T ss_dssp             CTTCCEEETT----TEEECCTTCBSTTSC
T ss_pred             CCCCCEecCC----CceECCCCCcCCCCc
Confidence            77 7899875    349999999998643

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.42  E-value=4.9e-05  Score=59.57  Aligned_cols=34  Identities=29%  Similarity=0.540  Sum_probs=30.1

Q ss_pred             cCCCCCCCCcCCCeeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~~~~CggGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++|+|..++|.+|+|++.. ++|+|+|++||++..
T Consensus         3 dideC~~~pC~ng~C~n~~-g~y~C~C~~G~~g~~   36 (147)
T 2w86_A            3 DIDECESSPCINGVCKNSP-GSFICECSSESTLDP   36 (147)
T ss_dssp             CCCGGGGCCSBTSEEEEET-TEEEEECCTTEEECT
T ss_pred             cCccCcCCCCCCCEeECCC-CCEEeECCCCcccCC
Confidence            5699999999988999975 799999999999764

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.41  E-value=0.00077  Score=65.18  Aligned_cols=30  Identities=20%  Similarity=0.523  Sum_probs=21.3

Q ss_pred             CCCCCCCC--cCCCeeecCCCCceeeecCCCCcC
Q 027951          117 FDLCRWID--CGGGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       117 ~DPC~~~~--CggGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      .|+|....  |. .+|++.. ++|+|.|.+||.+
T Consensus       294 ~~eC~~~~~~C~-~~C~~~~-~~~~C~C~~G~~~  325 (699)
T 1n7d_A          294 TNECLDNNGGCS-HVCNDLK-IGYECLCPDGFQL  325 (699)
T ss_dssp             CCCTTSSTTTSC-TTCCCCT-TCCCCCCCSSSCC
T ss_pred             cccccccccCcC-CCcccCC-CCcEEeCCCCeEc
Confidence            35555432  33 4798865 7999999999994

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.36  E-value=7e-05  Score=50.74  Aligned_cols=32  Identities=22%  Similarity=0.460  Sum_probs=25.3

Q ss_pred             cCCCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           45 KVTCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        45 ~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      ..+|.| |+|+.... ..+|+|+|.+||+|.+|+
T Consensus        11 ~~pC~nGG~C~~~~~-~~~~~C~C~~GytG~~Ce   43 (53)
T 1nql_B           11 DGYCLHDGVCMYIEA-LDKYACNCVVGYIGERCQ   43 (53)
T ss_dssp             CCEECTTCEEEEETT-TTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCeEEeeecC-CCCEEEecCCCCcCCCCC
Confidence            458997 69983211 558999999999999986

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.34  E-value=0.0001  Score=69.00  Aligned_cols=85  Identities=21%  Similarity=0.255  Sum_probs=27.8

Q ss_pred             Cccee-ecCCCCccCcccccCCCccCCccCC-CCCC-------CCCCCCCCCCcccccccCC-C----------CcCCCC
Q 027951           61 FFYEC-ECDLGWKQNTMAVDQNLKFLPCIAP-DCTL-------NQDCAPSPSPAQEKAAKKN-E----------SIFDLC  120 (216)
Q Consensus        61 ~~Y~C-~C~pGwtg~~c~~~d~~~~lPC~ip-nCt~-------n~sC~~~~~~~~~~~~~~n-~----------s~~DPC  120 (216)
                      .+++| +|.+||.|..++..+.|..-+|... .|..       ++.|.+.+++.     +.+ +          ...+.|
T Consensus       416 ~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~-----G~~Ce~C~~G~~g~~~~~~~C  490 (525)
T 4aqs_A          416 EGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVT-----GQRCDQCLPQHWGLSNDLDGC  490 (525)
T ss_dssp             ETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCC-----STTTCC---------------
T ss_pred             CCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCc-----CCCcccCCCCccCCCCCCCCC
Confidence            35666 5778887777665556666666532 3332       35677766662     222 1          234678


Q ss_pred             CCCCcC-CCeeecC-CCCceeeecCCCCcCCC
Q 027951          121 RWIDCG-GGSCKNT-SMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       121 ~~~~Cg-gGtCv~~-~~~sY~C~C~~Gy~nll  150 (216)
                      ...+|. +|+|... ...+++|+|++||.|..
T Consensus       491 ~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~  522 (525)
T 4aqs_A          491 RPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQ  522 (525)
T ss_dssp             --------------------------------
T ss_pred             cCCCCCCCCccCCccCCCCCeeECCCCCcCCC
Confidence            777787 6666543 12467899999999975

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.33  E-value=0.00028  Score=69.91  Aligned_cols=91  Identities=16%  Similarity=0.362  Sum_probs=31.0

Q ss_pred             CCCCCeeeccCCCCCccee----ecCCCCccCcccccCCCc---cCCccCCCCCCC-CCCCCCCCCcccccccCCCCcCC
Q 027951           47 TCGKGKCKASQNSTFFYEC----ECDLGWKQNTMAVDQNLK---FLPCIAPDCTLN-QDCAPSPSPAQEKAAKKNESIFD  118 (216)
Q Consensus        47 ~Cg~GtC~~~~~~~~~Y~C----~C~pGwtg~~c~~~d~~~---~lPC~ipnCt~n-~sC~~~~~~~~~~~~~~n~s~~D  118 (216)
                      .|.+|.|+..     .++|    +|..|+.+..|...++|.   ..+|..+.|... ..|....-..    .+..| ..+
T Consensus       239 ~C~~g~Ci~~-----~~~Cdg~~dC~dgsDE~~C~~~~~C~~~~~~~C~~G~Ci~~~~~Cd~~~dC~----dgsDe-~~~  308 (791)
T 3m0c_C          239 QCSDGNCIHG-----SRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCR----DWSDE-PIK  308 (791)
T ss_dssp             ---------------------------------------CCSTTCCCCTTSCCCCSSCCSCSSCCSS----SSCSC-CCT
T ss_pred             eecCCceEec-----ceecCChhccccccccCcccccccccCCCccccCCCcccccccccCCccccc----cccCc-ccc
Confidence            4555666553     3455    577777777766444442   346766666542 1221111110    00011 113


Q ss_pred             CCCCCCcC------CCeeecCCCCceeeecCCCCcC
Q 027951          119 LCRWIDCG------GGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       119 PC~~~~Cg------gGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      .|..+.|.      ..+|++.. ++|+|.|++||..
T Consensus       309 ~C~~~~C~~~~~~C~~~C~~~~-~~y~C~C~~Gy~l  343 (791)
T 3m0c_C          309 ECGTNECLDNNGGCSHVCNDLK-IGYECLCPDGFQL  343 (791)
T ss_dssp             TBSCCSTTTGGGGCSSEEEECS-BSEEEECCTTCEE
T ss_pred             ccccccccccccCccccccCCC-CCcccCCCCCCcc
Confidence            34444443      23899875 7899999999973

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.31  E-value=0.0002  Score=47.02  Aligned_cols=27  Identities=22%  Similarity=0.363  Sum_probs=22.0

Q ss_pred             CCcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951          123 IDCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       123 ~~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      .+|. ++|++.. ++|+|.|.+||.+..+
T Consensus        20 ~~C~-~~C~n~~-Gsy~C~C~~Gy~~~~d   46 (53)
T 1apq_A           20 PQCQ-HLCHNYV-GGYFCSCRPGYELQED   46 (53)
T ss_dssp             CTTS-SEEEEET-TEEEEECSTTCEECTT
T ss_pred             CCCC-CEeECCC-CCeEEECCCCCeECCC
Confidence            4676 4999976 8999999999987653

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=97.25  E-value=0.00014  Score=57.33  Aligned_cols=36  Identities=33%  Similarity=0.493  Sum_probs=31.0

Q ss_pred             cCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCCC
Q 027951          116 IFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLNT  152 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~  152 (216)
                      ++|+|..++|. +|+|++.. ++|+|.|++||+|..-.
T Consensus        46 did~C~~~pC~n~g~C~~~~-g~y~C~C~~G~~G~~C~   82 (142)
T 2c4f_L           46 DGDQCASSPCQNGGSCKDQL-QSYICFCLPAFEGRNCE   82 (142)
T ss_dssp             TCCGGGGCCCCTTCEEEEET-TEEEEECCTTEESTTSC
T ss_pred             ccCcCcCCCcCCCCEEeCCC-CCEEeeCCCCccCCccc
Confidence            46899999998 68999975 79999999999987643

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=97.19  E-value=0.00013  Score=55.31  Aligned_cols=33  Identities=27%  Similarity=0.556  Sum_probs=25.5

Q ss_pred             CCCCCCCC--------cC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          117 FDLCRWID--------CG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       117 ~DPC~~~~--------Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      .|+|..++        |. +|+|++.. ++|+|.|.+||+|..
T Consensus         6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~-~~y~C~C~~G~~G~~   47 (114)
T 1aut_L            6 GDQCLVLPLEHPCASLCCGHGTCIDGI-GSFSCDCRSGWEGRF   47 (114)
T ss_dssp             --CCCCCSSCCSSSSTTTTSEEECCCS-SCCCEEECTTEESTT
T ss_pred             cccccCCCccccccccCCCcCCCCCCC-CCcEeeCCCCCcCCC
Confidence            35555555        76 88999875 789999999999986

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=97.17  E-value=0.00024  Score=61.57  Aligned_cols=42  Identities=21%  Similarity=0.430  Sum_probs=33.5

Q ss_pred             cCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCCC-Cccccc
Q 027951          116 IFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLNT-STFPCY  158 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~-t~~pC~  158 (216)
                      +.|+|..++|. +|+|++.. ++|+|.|.+||.|..-. ...+|.
T Consensus         4 d~~~C~~~pC~~~g~C~~~~-~~~~C~C~~g~~g~~C~~~~~eC~   47 (317)
T 3h5c_B            4 GGSPCISQPCLHNGSCQDSI-WGYTCTCSPGYEGSNCELAKNECH   47 (317)
T ss_dssp             --CCTTSCCCTTTCCCCCCS-SSCCCCCSSSCCSSSSCCCSSSCC
T ss_pred             cCCcCCCCCCCCCCEeECCC-CCeEEECCCCCcCCccccCcccCC
Confidence            45899999999 78999875 78999999999998654 555554

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.13  E-value=0.00017  Score=56.54  Aligned_cols=36  Identities=25%  Similarity=0.562  Sum_probs=29.7

Q ss_pred             CCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCCCCc
Q 027951          118 DLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLNTST  154 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t~  154 (216)
                      ++|...+|. +|+|+++. ++|+|+|.+||+|..-.+.
T Consensus       120 ~~c~~~~C~~~g~C~~~~-~~~~c~C~~g~~G~~Ce~~  156 (162)
T 1g1s_A          120 ASCQDMSCSKQGECLETI-GNYTCSCYPGFYGPECEYV  156 (162)
T ss_dssp             CCCCTTGGGGSEEEEECS-SSEEEEECTTEESTTSCEE
T ss_pred             CCCcCCCCCCCCEEecCC-CCceEeCCCCCcCcccccC
Confidence            578888898 78999975 7899999999999754333

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=97.11  E-value=0.00018  Score=49.59  Aligned_cols=32  Identities=25%  Similarity=0.588  Sum_probs=24.4

Q ss_pred             CCCCC-eeeccC-CCCCcceeecCCCCccCcccc
Q 027951           47 TCGKG-KCKASQ-NSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        47 ~Cg~G-tC~~~~-~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      +|.|| +|+... ....+|.|+|.+||+|.+|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence            89985 998321 014479999999999999873

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.00  E-value=0.00027  Score=47.82  Aligned_cols=29  Identities=24%  Similarity=0.427  Sum_probs=22.8

Q ss_pred             CCCcC-CCeeec-CCCCceeeecCCCCcCCC
Q 027951          122 WIDCG-GGSCKN-TSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       122 ~~~Cg-gGtCv~-~~~~sY~C~C~~Gy~nll  150 (216)
                      .++|. +|+|+. ...++|+|+|.+||+|..
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~   41 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGER   41 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTT
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCCC
Confidence            35787 789983 234689999999999976

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.00  E-value=0.00012  Score=57.24  Aligned_cols=42  Identities=26%  Similarity=0.392  Sum_probs=2.2

Q ss_pred             cCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCCCC-c-cccc
Q 027951          116 IFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLNTS-T-FPCY  158 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t-~-~pC~  158 (216)
                      ++|+|..++|. +|+|++.. ++|+|.|++||+|..-.. . .+|.
T Consensus        41 d~d~C~~~pC~n~g~C~~~~-~~y~C~C~~G~~G~~C~~~i~d~C~   85 (134)
T 2vh0_B           41 DGDQCETSPCQNQGKCKDGL-GEYTCTCLEGFEGKNCELFTRKLCS   85 (134)
T ss_dssp             -----------------------------------------CCGGG
T ss_pred             CcCcCCCCCCCCcCCcccCC-CCEEeeCCCCccCCccccCCCCccc
Confidence            45899999998 68999875 789999999999986444 3 5565

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.97  E-value=0.00023  Score=47.53  Aligned_cols=33  Identities=24%  Similarity=0.530  Sum_probs=24.8

Q ss_pred             cCCCCC-CeeeccCC-CCCcceeecCCCCccCccc
Q 027951           45 KVTCGK-GKCKASQN-STFFYECECDLGWKQNTMA   77 (216)
Q Consensus        45 ~~~Cg~-GtC~~~~~-~~~~Y~C~C~pGwtg~~c~   77 (216)
                      ..+|.| |+|+.... ...+|+|+|.+||+|.+|+
T Consensus        13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce   47 (52)
T 3ca7_A           13 AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (52)
T ss_dssp             HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred             CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence            357997 59996310 1347999999999999976

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=96.97  E-value=0.00034  Score=55.53  Aligned_cols=32  Identities=34%  Similarity=0.572  Sum_probs=27.5

Q ss_pred             cCCCCCC-CCcCCCeeecCCCCceeeecCCCCcC
Q 027951          116 IFDLCRW-IDCGGGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       116 ~~DPC~~-~~CggGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      ++|+|.. ++|.+|+|++.. ++|+|.|++||++
T Consensus         2 dideC~~~~~C~~~~C~n~~-gsy~C~C~~Gy~~   34 (162)
T 1uzk_A            2 DVNECLDPTTCISGNCVNTP-GSYICDCPPDFEL   34 (162)
T ss_dssp             CCCGGGSTTSSBTSEEEEET-TEEEEECCTTCEE
T ss_pred             ccccCCCCCCCCCCEeECCC-CCEEEeCCCCCeE
Confidence            4688984 789889999976 7999999999983

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=96.93  E-value=0.00068  Score=52.73  Aligned_cols=30  Identities=17%  Similarity=0.377  Sum_probs=22.7

Q ss_pred             CCCC-CeeeccCCCCCcc-eeecCCCCccCccc
Q 027951           47 TCGK-GKCKASQNSTFFY-ECECDLGWKQNTMA   77 (216)
Q Consensus        47 ~Cg~-GtC~~~~~~~~~Y-~C~C~pGwtg~~c~   77 (216)
                      +|+| |+|++.... .+| +|.|.+||+|..|+
T Consensus         2 pC~nggtC~~~~~~-~~~~~C~Cp~g~~G~~Ce   33 (122)
T 2fd6_A            2 DCLNGGTCVSNKYF-SNIHWCNCPKKFGGQHCE   33 (122)
T ss_dssp             CCCSSCEEEECTTT-TTCEEEECCTTEESTTSC
T ss_pred             CCCCcCCcCCCccc-CCCCCccCCCCCCCcccc
Confidence            7997 599875211 245 99999999999865

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=96.91  E-value=0.00057  Score=46.28  Aligned_cols=33  Identities=18%  Similarity=0.325  Sum_probs=26.3

Q ss_pred             cCCCCCCeeeccCCCCCcceeecCCCCccCcccc
Q 027951           45 KVTCGKGKCKASQNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        45 ~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      +..|.||+|.-..+ ...+.|+|.+||+|.+|+.
T Consensus        13 ~~yC~nG~C~~~~~-~~~~~C~C~~gy~G~RCe~   45 (50)
T 3e50_C           13 TQFCFHGTCRFLVQ-EDKPACVCHSGYVGARCEH   45 (50)
T ss_pred             cCcccCCEEeeccC-CCCeEEECCCCCcccCCCc
Confidence            35699999986422 4579999999999999874

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=96.90  E-value=0.00016  Score=60.88  Aligned_cols=42  Identities=26%  Similarity=0.392  Sum_probs=2.0

Q ss_pred             cCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCCCCC-c-cccc
Q 027951          116 IFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLNTS-T-FPCY  158 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t-~-~pC~  158 (216)
                      ++|+|..++|. +|+|++.. ++|+|.|.+||+|..-.. . .+|.
T Consensus        41 dideC~~~pC~ngg~C~n~~-g~y~C~C~~Gf~G~~Ce~~i~deC~   85 (195)
T 1nfu_B           41 DGDQCETSPCQNQGKCKDGL-GEYTCTCLEGFEGKNCELFTRKLCS   85 (195)
T ss_dssp             -----------------------------------------CCGGG
T ss_pred             CCcccCCCCCCCCCEeECCC-CCeeEeCCCCceecccccccccccc
Confidence            45899999998 78999975 789999999999986543 2 4554

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=96.89  E-value=0.0003  Score=52.04  Aligned_cols=37  Identities=24%  Similarity=0.485  Sum_probs=28.4

Q ss_pred             cCCCc---cCCCCCCeeeccCCCCCcceeecCCCCccCccc
Q 027951           40 ENVCD---KVTCGKGKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        40 ~~~C~---~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      .++|.   ...|.||+|.-..+ ...|.|.|.+||+|.+|+
T Consensus        37 ~~pC~~~~~~yClnG~C~~i~~-~~~~~C~C~~GYtG~RCE   76 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHGECKYVKE-LRAPSCICHPGYHGERCH   76 (79)
T ss_dssp             --CTTTTTTTCCSSEEECCBGG-GTBCCEEECTTEESTTCC
T ss_pred             CCCCCccccCcCCCCEeeeecC-CCCeEEEcCCCccccccc
Confidence            35888   77899999954322 347899999999999975

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=96.80  E-value=0.0005  Score=52.11  Aligned_cols=20  Identities=20%  Similarity=0.531  Sum_probs=17.7

Q ss_pred             CeeecCCCCceeeecCCCCcC
Q 027951          128 GSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       128 GtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      .+|++.. ++|+|.|++||.+
T Consensus        41 ~~C~n~~-g~y~C~C~~Gy~g   60 (107)
T 2w2n_E           41 YVCNDLK-IGYECLCPDGFQL   60 (107)
T ss_dssp             SEEECCS-BSCEEECCTTCEE
T ss_pred             CEeEeCC-CCeEEECCCCccc
Confidence            4899865 7899999999998

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.70  E-value=0.00062  Score=65.29  Aligned_cols=35  Identities=26%  Similarity=0.662  Sum_probs=31.0

Q ss_pred             CCCccCCCCC-Ceeec-cCCCCCcceeecC-CCCccCcccc
Q 027951           41 NVCDKVTCGK-GKCKA-SQNSTFFYECECD-LGWKQNTMAV   78 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~-~~~~~~~Y~C~C~-pGwtg~~c~~   78 (216)
                      +.|...+|+| |+|++ .   ..+|+|.|. +||+|.+|+.
T Consensus         3 d~C~~~PC~ngG~C~~~~---~~~y~C~C~~~G~~G~~Ce~   40 (553)
T 1q4g_A            3 NPCCYYPCQHQGICVRFG---LDRYQCDCTRTGYSGPNCTI   40 (553)
T ss_dssp             CGGGGCCCCTTCEEEEET---TTEEEEECTTSSEETTTTCE
T ss_pred             CcCCCCCCCCCCCcCCCC---CCceEeeCCCCCcCCCCCCC
Confidence            6899999998 59998 5   568999999 9999999874

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=96.64  E-value=0.0011  Score=44.67  Aligned_cols=38  Identities=16%  Similarity=0.430  Sum_probs=26.7

Q ss_pred             CCCcc--CCCCCCeeeccCCCCCcceeecCCCCc----cCcccccCCC
Q 027951           41 NVCDK--VTCGKGKCKASQNSTFFYECECDLGWK----QNTMAVDQNL   82 (216)
Q Consensus        41 ~~C~~--~~Cg~GtC~~~~~~~~~Y~C~C~pGwt----g~~c~~~d~~   82 (216)
                      |.|+.  ..|.+ .|+.+   +.+|+|.|.+||+    |..|.+++++
T Consensus         2 dEC~~~~~~C~~-~C~nt---~Gsy~C~C~~Gy~L~~d~~~C~didec   45 (55)
T 2jkh_L            2 KLCSLDNGDCDQ-FCHEE---QNSVVCSCARGYTLADNGKACIPTGPY   45 (55)
T ss_dssp             CCTTTGGGGCSS-EEEEE---TTEEEEECCTTEEECTTSSCEEESSSS
T ss_pred             ccccCCCCCcCc-EeEcC---CCCeEEeCCCCCEECCCCCeeccCccc
Confidence            45653  35766 89987   7799999999997    4445544443

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.56  E-value=0.00037  Score=64.92  Aligned_cols=47  Identities=26%  Similarity=0.469  Sum_probs=25.7

Q ss_pred             CCCCCCCcCCCeeecCCCCceeeecCCCCcCCCCCCcccccccCCcccccccC
Q 027951          118 DLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNM  170 (216)
Q Consensus       118 DPC~~~~CggGtCv~~~~~sY~C~C~~Gy~nlln~t~~pC~~~CslG~dC~~l  170 (216)
                      +.|.. .|.+|+|++.    ++|.|.+||+|..- ....|...|+-|.-|.+.
T Consensus       393 ~~C~~-~C~nG~C~~~----~~C~C~~G~~G~~C-~~~~C~~~C~~~g~C~~~  439 (463)
T 2wg3_C          393 SECSR-LCRNGYCTPT----GKCCCSPGWEGDFC-RTAKCEPACRHGGVCVRP  439 (463)
T ss_dssp             CHHHH-HCCSEEECTT----SCEEECTTEESTTS-CEECC-------------
T ss_pred             ccccC-CCCCCccCCC----CeECCCCCcCCCcC-CcCcCCCCCCCCCEECCC
Confidence            34543 4778999863    58999999999864 467788888888888653

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=96.52  E-value=0.002  Score=43.45  Aligned_cols=36  Identities=22%  Similarity=0.518  Sum_probs=27.9

Q ss_pred             CCCc---cCCCCCCeeeccCCCCCcceeecCCCCccCccc
Q 027951           41 NVCD---KVTCGKGKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        41 ~~C~---~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      ++|.   +..|.||+|.-..+ ...+.|+|.+||+|.+|+
T Consensus        10 ~~C~~~~~~yC~nG~C~~i~~-~~~~~C~C~~gy~G~RCe   48 (50)
T 2rnl_A           10 NPCNAEFQNFCIHGECKYIEH-LEAVTCKCQQEYFGERCG   48 (50)
T ss_dssp             CTTTTTGGGTCSSSEEEEETT-TTEEEEECCSSCCSSSCC
T ss_pred             cccCchhhCcCCCCEEEEecC-CCCeeEECCCCccccccc
Confidence            4676   36799999983322 457899999999999975

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=96.48  E-value=0.0013  Score=44.29  Aligned_cols=33  Identities=27%  Similarity=0.479  Sum_probs=26.2

Q ss_pred             cCCCCCCeeeccCCCCCcceeecCCCCccCcccc
Q 027951           45 KVTCGKGKCKASQNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        45 ~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      +..|.||+|.-..+ ...+.|+|.+||+|.+|+.
T Consensus        13 ~~yC~nG~C~~~~~-~~~~~C~C~~gy~G~RCe~   45 (50)
T 1iox_A           13 KHYCIKGRCRFVVA-EQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             TTSCTTCCEEEETT-TTEEEECCCTTEETTTTCE
T ss_pred             cCcccCCEEEeEcC-CCCeEEECCCCcccCCCCe
Confidence            45799999974322 4578999999999999873

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.42  E-value=0.00092  Score=44.57  Aligned_cols=27  Identities=26%  Similarity=0.589  Sum_probs=20.8

Q ss_pred             CcC-CCeeecC---CCCceeeecCCCCcCCC
Q 027951          124 DCG-GGSCKNT---SMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       124 ~Cg-gGtCv~~---~~~sY~C~C~~Gy~nll  150 (216)
                      +|. +|+|+..   ..++|+|+|.+||+|..
T Consensus        15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~   45 (52)
T 3ca7_A           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQR   45 (52)
T ss_dssp             TSCTTCEEEEEEETTEEEEEEECCTTEESTT
T ss_pred             cCCCCCEEecCccCCCCCEEEECCCCCcCCC
Confidence            355 7899962   23589999999999975

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=96.39  E-value=0.0012  Score=64.02  Aligned_cols=35  Identities=26%  Similarity=0.680  Sum_probs=29.6

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecC-CCCccCccc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECD-LGWKQNTMA   77 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~-pGwtg~~c~   77 (216)
                      +.|...+|+| |+|++..  ..+|+|.|. +||+|..|+
T Consensus         2 d~C~s~PC~ngG~C~~~~--~~~y~C~C~~~G~~G~~Ce   38 (587)
T 3nt1_A            2 NPCCSNPCQNRGECMSTG--FDQYKCDCTRTGFYGENCT   38 (587)
T ss_dssp             CTTTTCCCCTTCEEEEEE--TTEEEEECTTSSEETTTTC
T ss_pred             CCCCCCCCCCCCEeeCCC--CCCeEEecCCCCccCCCCC
Confidence            5899999997 5999632  358999999 999999976

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=96.38  E-value=0.0013  Score=63.76  Aligned_cols=34  Identities=26%  Similarity=0.612  Sum_probs=28.7

Q ss_pred             CCCCCCCCcC-CCeeecCCCCceeeecC-CCCcCCC
Q 027951          117 FDLCRWIDCG-GGSCKNTSMFSYSCQCA-VDHYNLL  150 (216)
Q Consensus       117 ~DPC~~~~Cg-gGtCv~~~~~sY~C~C~-~Gy~nll  150 (216)
                      +|+|..++|. +|+|++...++|+|.|. +||+|..
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~   36 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGEN   36 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTT
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCC
Confidence            3789999998 78999643368999999 9999865

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=96.35  E-value=0.0035  Score=42.28  Aligned_cols=35  Identities=20%  Similarity=0.416  Sum_probs=27.8

Q ss_pred             cCCCCCC---CCcCCCeee-cCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCRW---IDCGGGSCK-NTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~~---~~CggGtCv-~~~~~sY~C~C~~Gy~nll  150 (216)
                      .++||..   ++|.+|+|. -.....++|+|..||+|.-
T Consensus         8 ~~~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~G~R   46 (50)
T 2rnl_A            8 KKNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYFGER   46 (50)
T ss_dssp             CCCTTTTTGGGTCSSSEEEEETTTTEEEEECCSSCCSSS
T ss_pred             cCcccCchhhCcCCCCEEEEecCCCCeeEECCCCccccc
Confidence            3578873   789999997 3345689999999999975

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=96.31  E-value=0.0045  Score=47.53  Aligned_cols=75  Identities=24%  Similarity=0.496  Sum_probs=51.6

Q ss_pred             cCCCccCCCC-CCeeeccCCCCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcCC
Q 027951           40 ENVCDKVTCG-KGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFD  118 (216)
Q Consensus        40 ~~~C~~~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~D  118 (216)
                      ..+|....|. +-.|....  ++.++|+|.+||+|..-.         |+                         +...+
T Consensus         4 ~h~C~~~~C~~NA~C~r~~--~g~e~C~C~~gy~gdg~~---------Cv-------------------------~~~~~   47 (99)
T 1ob1_C            4 QHQCVKKQCPQNSGCFRHL--DEREECKCLLNYKQEGDK---------CV-------------------------ENPNP   47 (99)
T ss_dssp             TTCCCSCCCCTTEEEECCT--TSCCEEEECTTEEEETTE---------EE-------------------------ECSCC
T ss_pred             ceEeccCCCCCCCCeEEcC--CCCEEEEecCCeecCCCe---------Ee-------------------------eCCCC
Confidence            4567777777 56887653  668999999999985310         22                         00114


Q ss_pred             CCCCC--CcC-CCeeecCCC----CceeeecCCCCcCCC
Q 027951          119 LCRWI--DCG-GGSCKNTSM----FSYSCQCAVDHYNLL  150 (216)
Q Consensus       119 PC~~~--~Cg-gGtCv~~~~----~sY~C~C~~Gy~nll  150 (216)
                      +|..+  -|. +.+|+....    ....|+|.+||++.+
T Consensus        48 sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~~   86 (99)
T 1ob1_C           48 TCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPL   86 (99)
T ss_dssp             CSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCCEE
T ss_pred             ChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcccc
Confidence            66653  377 778887653    579999999998765

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=96.15  E-value=0.0028  Score=41.36  Aligned_cols=26  Identities=23%  Similarity=0.515  Sum_probs=21.6

Q ss_pred             CCCCCCeeeccCCCCCcceeecCCCCccCc
Q 027951           46 VTCGKGKCKASQNSTFFYECECDLGWKQNT   75 (216)
Q Consensus        46 ~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~   75 (216)
                      .+|. ++|+.+   ..+|+|.|.+||++..
T Consensus        20 ~~C~-~~C~n~---~Gsy~C~C~~Gy~~~~   45 (53)
T 1apq_A           20 PQCQ-HLCHNY---VGGYFCSCRPGYELQE   45 (53)
T ss_dssp             CTTS-SEEEEE---TTEEEEECSTTCEECT
T ss_pred             CCCC-CEeECC---CCCeEEECCCCCeECC
Confidence            4686 499988   6799999999999753

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=96.13  E-value=0.0017  Score=48.03  Aligned_cols=35  Identities=26%  Similarity=0.287  Sum_probs=26.2

Q ss_pred             cCCCCC---CCCcCCCeeec-CCCCceeeecCCCCcCCC
Q 027951          116 IFDLCR---WIDCGGGSCKN-TSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~---~~~CggGtCv~-~~~~sY~C~C~~Gy~nll  150 (216)
                      ..+||.   .++|.+|+|.- .....|.|.|.+||+|.-
T Consensus        36 ~~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYtG~R   74 (79)
T 1xdt_R           36 KRDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGER   74 (79)
T ss_dssp             ---CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEESTT
T ss_pred             cCCCCCccccCcCCCCEeeeecCCCCeEEEcCCCccccc
Confidence            458998   78999999943 223579999999999975

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.11  E-value=0.002  Score=61.73  Aligned_cols=33  Identities=21%  Similarity=0.527  Sum_probs=29.1

Q ss_pred             CCCCCCCCcC-CCeeec-CCCCceeeecC-CCCcCCC
Q 027951          117 FDLCRWIDCG-GGSCKN-TSMFSYSCQCA-VDHYNLL  150 (216)
Q Consensus       117 ~DPC~~~~Cg-gGtCv~-~~~~sY~C~C~-~Gy~nll  150 (216)
                      .|+|..++|. +|+|++ .. ++|+|.|. +||+|..
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~-~~y~C~C~~~G~~G~~   37 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGL-DRYQCDCTRTGYSGPN   37 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETT-TEEEEECTTSSEETTT
T ss_pred             CCcCCCCCCCCCCCcCCCCC-CceEeeCCCCCcCCCC
Confidence            4889999999 789999 54 78999999 9999965

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.10  E-value=0.0031  Score=56.41  Aligned_cols=30  Identities=20%  Similarity=0.471  Sum_probs=25.2

Q ss_pred             CCCCCCCcC-CCeeecCCCCceeeecCCCCcC
Q 027951          118 DLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      |+|...+|+ +++|++.. ++|+|.|++||.+
T Consensus         1 ~eC~~~~~~c~~~C~~~~-~~y~C~C~~G~~~   31 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLK-IGYECLCPDGFQL   31 (400)
T ss_dssp             CCTTTTGGGCSSEEEECS-SSEEEECCTTEEE
T ss_pred             CcccCCCCCCCCEeECCC-CCeEEECCCCCCc
Confidence            578877776 67999975 7899999999984

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=96.01  E-value=0.0041  Score=48.68  Aligned_cols=32  Identities=28%  Similarity=0.688  Sum_probs=27.4

Q ss_pred             CCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          118 DLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      .+|...+|. +|+|++.. ++|+|.|.+||.|..
T Consensus       120 ~~~~~~~C~~~g~C~~~~-~~~~c~C~~g~~g~~  152 (164)
T 3cfw_A          120 ASCQPWSCSGHGECVEII-NNYTCNCDVGYYGPQ  152 (164)
T ss_dssp             CCCCTTSSCSSEEEEEET-TEEEEEECTTCBSSS
T ss_pred             CCCCCCcCCCCCeecccC-CCceeeeCCCccccc
Confidence            457778898 89999975 799999999999965

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=96.00  E-value=0.0031  Score=44.78  Aligned_cols=32  Identities=22%  Similarity=0.276  Sum_probs=23.4

Q ss_pred             cCCCCCC--CCcC-CCeeecCCCCceeee-cCCCCcC
Q 027951          116 IFDLCRW--IDCG-GGSCKNTSMFSYSCQ-CAVDHYN  148 (216)
Q Consensus       116 ~~DPC~~--~~Cg-gGtCv~~~~~sY~C~-C~~Gy~n  148 (216)
                      ++|+|..  +.|. +++|+++. ++|+|. |..||.+
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~-Gsy~C~~~~~g~~~   37 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHY-GGYLCLPRSAAVIN   37 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETT-CCEEEEETTSCCCS
T ss_pred             ccccccCCCCCCCCCCEeECCC-CCeEecccCCcccc
Confidence            3588975  5798 56999976 899998 3455654

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=95.92  E-value=0.0014  Score=58.64  Aligned_cols=34  Identities=15%  Similarity=0.493  Sum_probs=26.4

Q ss_pred             cCCCCC--CCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCR--WIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~--~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      +.|+|.  .+.|. +++|+++. ++|+|+|++||.|..
T Consensus         4 DiDEC~~~~~~C~~~a~C~Nt~-Gsy~C~C~~Gy~GnG   40 (285)
T 1gl4_A            4 AQQTCANNRHQCSVHAECRDYA-TGFCCRCVANYTGNG   40 (285)
T ss_dssp             ---CHHHHGGGSCTTEEEEECS-SCEEEEECTTEEECS
T ss_pred             cchhccCCCCCCCCCCEeEcCC-CCeEEEcCCCCCCCC
Confidence            468997  47898 78999976 899999999999643

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=95.73  E-value=0.0035  Score=48.52  Aligned_cols=33  Identities=27%  Similarity=0.793  Sum_probs=26.5

Q ss_pred             CCccCCCC-CCeeeccCCCCCcceeecCCCCccCccc
Q 027951           42 VCDKVTCG-KGKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        42 ~C~~~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      .|...+|. +|+|.+.   ...|.|+|.+||+|.+|+
T Consensus       121 ~~~~~pc~~~g~C~~~---~~~~~c~C~~g~~g~~Ce  154 (157)
T 1g1t_A          121 ACTNTSCSGHGECVET---INNYTCKCDPGFSGLKCE  154 (157)
T ss_dssp             CCCTTGGGGSEEEEEE---TTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCCCCCEeecC---CCCeeEECCCCccCcccc
Confidence            34555676 4799987   669999999999999976

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=95.69  E-value=0.021  Score=44.25  Aligned_cols=74  Identities=19%  Similarity=0.391  Sum_probs=53.6

Q ss_pred             ccCCCccCCCC-CCeeeccCCCCCcceeecCCCCccCcccccCCCccCCccCCCCCCCCCCCCCCCCcccccccCCCCcC
Q 027951           39 FENVCDKVTCG-KGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIF  117 (216)
Q Consensus        39 ~~~~C~~~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~d~~~~lPC~ipnCt~n~sC~~~~~~~~~~~~~~n~s~~  117 (216)
                      ...+|....|. |..|....  ++..+|+|..||++.--.         |+                          .+ 
T Consensus         9 ~~h~C~~t~Cp~NA~C~r~~--~G~e~CrCl~gY~~dg~~---------Cv--------------------------~~-   50 (105)
T 1n1i_A            9 SAHKCIDTNVPENAACYRYL--DGTEEWRCLLGFKEVGGK---------CV--------------------------PA-   50 (105)
T ss_dssp             CTTSCCSSCCCTTEEEEECT--TSCEEEEECTTEEECSSS---------EE--------------------------EC-
T ss_pred             cCcEecCCCCCCCCCeEECC--CCCEeEEEECCeeccCCE---------EE--------------------------EC-
Confidence            37789888888 67998864  567899999999985310         32                          12 


Q ss_pred             CC-CCCC--CcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          118 DL-CRWI--DCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DP-C~~~--~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      +| |..+  -|. +.+|+......-.|+|.+||++.+
T Consensus        51 Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~   87 (105)
T 1n1i_A           51 SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPL   87 (105)
T ss_dssp             CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEE
T ss_pred             CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccc
Confidence            45 5443  376 788988654678999999998765

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=95.62  E-value=0.0043  Score=41.24  Aligned_cols=32  Identities=16%  Similarity=0.524  Sum_probs=23.4

Q ss_pred             CCCCCeeeccCCCCCcceeecCCCCc----cCcccccCCC
Q 027951           47 TCGKGKCKASQNSTFFYECECDLGWK----QNTMAVDQNL   82 (216)
Q Consensus        47 ~Cg~GtC~~~~~~~~~Y~C~C~pGwt----g~~c~~~d~~   82 (216)
                      .|.| .|+.+   +.+|+|.|.+||+    |..|.+++++
T Consensus         7 ~C~~-~C~n~---~gs~~C~C~~Gy~L~~d~~tC~dide~   42 (51)
T 1kig_L            7 GCDQ-FCREE---RSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             SSSS-CCCEE---TTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CcCC-EeEcC---CCCeEEeCCCCcEECCCCCccccCCcc
Confidence            4554 68876   6799999999997    4556655554

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.60  E-value=0.0026  Score=43.71  Aligned_cols=27  Identities=26%  Similarity=0.589  Sum_probs=21.2

Q ss_pred             CcC-CCeeecC---CCCceeeecCCCCcCCC
Q 027951          124 DCG-GGSCKNT---SMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       124 ~Cg-gGtCv~~---~~~sY~C~C~~Gy~nll  150 (216)
                      +|. +|+|+..   ...+|+|+|.+||+|..
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~   45 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQR   45 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSS
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCC
Confidence            677 7899832   23579999999999965

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.59  E-value=0.0023  Score=56.81  Aligned_cols=41  Identities=15%  Similarity=0.272  Sum_probs=0.0

Q ss_pred             CCCCCCCCcC-CCeeecCCCCceeeecCCCCc----CCCCCCccccc
Q 027951          117 FDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHY----NLLNTSTFPCY  158 (216)
Q Consensus       117 ~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~----nlln~t~~pC~  158 (216)
                      +|+|..++|+ +++|++.. ++|+|.|++||+    |..-....+|.
T Consensus         3 ~~~C~~~~~~c~~~C~~~~-g~~~C~C~~G~~l~~~~~~C~d~~eC~   48 (386)
T 3v65_B            3 EENCNVNNGGCAQKCQMIR-GAVQCTCHTGYRLTEDGRTCQDVNECA   48 (386)
T ss_dssp             -----------------------------------------------
T ss_pred             cCcccCCCCCCCCCCcCCC-CCcEeECCCCceECCCCCccCccceeC
Confidence            5889877755 45997654 789999999998    55545555553

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=95.59  E-value=0.0067  Score=40.68  Aligned_cols=34  Identities=24%  Similarity=0.416  Sum_probs=26.2

Q ss_pred             CCCCC---CCCcCCCeee-cCCCCceeeecCCCCcCCC
Q 027951          117 FDLCR---WIDCGGGSCK-NTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       117 ~DPC~---~~~CggGtCv-~~~~~sY~C~C~~Gy~nll  150 (216)
                      +.||.   ..+|.+|+|. ......++|+|++||+|.-
T Consensus         5 ~~~C~~~~~~yC~nG~C~~~~~~~~~~C~C~~gy~G~R   42 (50)
T 1iox_A            5 FSRCPKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGAR   42 (50)
T ss_dssp             CEECCGGGTTSCTTCCEEEETTTTEEEECCCTTEETTT
T ss_pred             ccccChhhcCcccCCEEEeEcCCCCeEEECCCCcccCC
Confidence            35674   4789999995 2344689999999999975

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=95.49  E-value=0.01  Score=39.78  Aligned_cols=30  Identities=30%  Similarity=0.541  Sum_probs=23.1

Q ss_pred             CCCCC--CCcCCCeeecCCCCceeeecCCCCcCC
Q 027951          118 DLCRW--IDCGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       118 DPC~~--~~CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      |+|..  ..|.+ .|+++. ++|+|.|++||.-.
T Consensus         2 dEC~~~~~~C~~-~C~nt~-Gsy~C~C~~Gy~L~   33 (55)
T 2jkh_L            2 KLCSLDNGDCDQ-FCHEEQ-NSVVCSCARGYTLA   33 (55)
T ss_dssp             CCTTTGGGGCSS-EEEEET-TEEEEECCTTEEEC
T ss_pred             ccccCCCCCcCc-EeEcCC-CCeEEeCCCCCEEC
Confidence            56764  34765 899976 89999999999743

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=95.48  E-value=0.011  Score=39.92  Aligned_cols=33  Identities=18%  Similarity=0.274  Sum_probs=25.3

Q ss_pred             CCCC---CCCcCCCeeecC-CCCceeeecCCCCcCCC
Q 027951          118 DLCR---WIDCGGGSCKNT-SMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~---~~~CggGtCv~~-~~~sY~C~C~~Gy~nll  150 (216)
                      .||.   ..+|.+|+|.-. ....|+|+|.+||+|.-
T Consensus         6 ~~C~~~~~~yC~nG~C~~~~~~~~~~C~C~~gy~G~R   42 (50)
T 3e50_C            6 NDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGAR   42 (50)
T ss_pred             cccChhhcCcccCCEEeeccCCCCeEEECCCCCcccC
Confidence            4554   367998899853 34689999999999975

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=95.34  E-value=0.005  Score=54.99  Aligned_cols=35  Identities=20%  Similarity=0.635  Sum_probs=25.4

Q ss_pred             ccccCCCc--cCCCC-CCeeeccCCCCCcceeecCCCCccC
Q 027951           37 PAFENVCD--KVTCG-KGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        37 ~~~~~~C~--~~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      |...|.|.  ...|. +++|+.+   ..+|+|+|++||+|.
T Consensus         2 ~~DiDEC~~~~~~C~~~a~C~Nt---~Gsy~C~C~~Gy~Gn   39 (285)
T 1gl4_A            2 PLAQQTCANNRHQCSVHAECRDY---ATGFCCRCVANYTGN   39 (285)
T ss_dssp             -----CHHHHGGGSCTTEEEEEC---SSCEEEEECTTEEEC
T ss_pred             CccchhccCCCCCCCCCCEeEcC---CCCeEEEcCCCCCCC
Confidence            55578897  46898 5699998   779999999999953

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=95.30  E-value=0.0092  Score=53.52  Aligned_cols=36  Identities=17%  Similarity=0.536  Sum_probs=30.6

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecCC-CCccCcccc
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECDL-GWKQNTMAV   78 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~p-Gwtg~~c~~   78 (216)
                      .+.|...+|.+ |+|++.   ..+|+|+|.. ||+|..|+.
T Consensus       185 ~~~C~~~pC~n~g~C~~~---~~~~~C~C~~~~~~G~~C~~  222 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQ---WDGFSCDCSMTSFSGPLCND  222 (410)
T ss_dssp             SSCCCTTSSSTTCEEEEC---SSSEEEECTTTSEESTTSCE
T ss_pred             CCCcccccCCCCCEecCC---CCCceEeccCCcccCCCCCC
Confidence            36799999997 699987   5689999996 999999873

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=95.21  E-value=0.01  Score=47.69  Aligned_cols=30  Identities=20%  Similarity=0.383  Sum_probs=23.2

Q ss_pred             CCC-CCeeeccCCCCCccee-ecCCCCccCccc
Q 027951           47 TCG-KGKCKASQNSTFFYEC-ECDLGWKQNTMA   77 (216)
Q Consensus        47 ~Cg-~GtC~~~~~~~~~Y~C-~C~pGwtg~~c~   77 (216)
                      +|. +|+|..... ...++| +|.+||+|.+|+
T Consensus         2 ~C~~~g~C~~~~~-~g~~~C~~C~~g~~G~~Ce   33 (162)
T 1klo_A            2 PCPGGSSCAIVPK-TKEVVCTHCPTGTAGKRCE   33 (162)
T ss_dssp             CSCTTCCEEECSS-SCCEEECSCCTTEESTTSC
T ss_pred             cCcCcCcccccCC-CCCEEeCCCCCCCcCCCCc
Confidence            466 469987632 347999 899999999976

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=94.96  E-value=0.022  Score=45.63  Aligned_cols=30  Identities=17%  Similarity=0.378  Sum_probs=23.3

Q ss_pred             CCCC-CeeeccCCCCCcc-eeecCCCCccCccc
Q 027951           47 TCGK-GKCKASQNSTFFY-ECECDLGWKQNTMA   77 (216)
Q Consensus        47 ~Cg~-GtC~~~~~~~~~Y-~C~C~pGwtg~~c~   77 (216)
                      +|+| |+|+... +..+| +|.|.+||+|..|+
T Consensus        14 pC~NGGtC~~~~-~~s~~~~C~Cp~g~~G~~Ce   45 (145)
T 2i9a_A           14 DCLNGGTCVSNK-YFSNIHWCNCPKKFGGQHCE   45 (145)
T ss_dssp             CCCTTCEEEECS-SSTTCEEEECCTTEESTTSC
T ss_pred             CCCCCCCcCCCc-cccCCccccCCCCCCCCcee
Confidence            8997 5997741 12356 89999999999976

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=94.91  E-value=0.013  Score=39.26  Aligned_cols=32  Identities=19%  Similarity=0.417  Sum_probs=23.4

Q ss_pred             CCCCCeeeccCCCCC-cceeecCCCCc----cCcccccCCC
Q 027951           47 TCGKGKCKASQNSTF-FYECECDLGWK----QNTMAVDQNL   82 (216)
Q Consensus        47 ~Cg~GtC~~~~~~~~-~Y~C~C~pGwt----g~~c~~~d~~   82 (216)
                      .|.| .|+.+   .. +|+|.|.+||+    |..|.++||+
T Consensus         8 gC~~-~C~n~---~ggs~~C~C~~Gy~L~~Dg~tC~d~dec   44 (53)
T 2bz6_L            8 GCEQ-YCSDH---TGTKRSCRCHEGYSLLADGVSCTPTVEY   44 (53)
T ss_dssp             GCSS-EEEEE---TTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred             CcCC-EeEcC---CCCCEEeeCCCCCEECCCCCcccCCccc
Confidence            4665 68887   55 69999999997    5556655554

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=94.48  E-value=0.023  Score=50.34  Aligned_cols=29  Identities=21%  Similarity=0.347  Sum_probs=19.5

Q ss_pred             CcC-CCeeecCCCCceeeecCCCCcCCCCCCcccc
Q 027951          124 DCG-GGSCKNTSMFSYSCQCAVDHYNLLNTSTFPC  157 (216)
Q Consensus       124 ~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t~~pC  157 (216)
                      .|. +|+|+-+     +|.|.++|.+..-+...+|
T Consensus       244 ~CSgrG~C~CG-----~C~C~~~~~~~~~~~G~~~  273 (280)
T 2p26_A          244 ICSGLGDCVCG-----QCLCHTSDVPGKLIYGQYC  273 (280)
T ss_dssp             GGGGSEEEETT-----EEEECCCSSTTCEEESTTS
T ss_pred             ccCCCceEeCC-----eeECcCCCCCCeeEeeEec
Confidence            475 8999974     7999988755433444333

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=94.20  E-value=0.018  Score=44.48  Aligned_cols=32  Identities=28%  Similarity=0.674  Sum_probs=27.5

Q ss_pred             CCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          118 DLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++|...+|. +|+|.++- .+|.|.|.+||+|..
T Consensus       120 ~~~~~~pc~~~g~C~~~~-~~~~c~C~~g~~g~~  152 (157)
T 1g1t_A          120 AACTNTSCSGHGECVETI-NNYTCKCDPGFSGLK  152 (157)
T ss_dssp             CCCCTTGGGGSEEEEEET-TEEEEEECTTEESTT
T ss_pred             CCCCCCCCCCCCEeecCC-CCeeEECCCCccCcc
Confidence            567778888 79999975 799999999999875

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=93.86  E-value=0.042  Score=38.81  Aligned_cols=34  Identities=21%  Similarity=0.304  Sum_probs=25.2

Q ss_pred             cCCCCCCC--CcCCCeeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCRWI--DCGGGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~~~--~CggGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++|+|...  .|.+ .|++..+++|+|.|.+||.-.-
T Consensus         4 d~~eC~~~nggC~h-~C~n~~g~s~~C~C~~Gy~L~~   39 (69)
T 1kli_L            4 DQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLA   39 (69)
T ss_dssp             CCCCTTSGGGGCSS-EEEEETTTEEEEECCTTEEECT
T ss_pred             ccccccCCCCCcCC-EeEcCCCCCEEEeCCCCCeECC
Confidence            46888753  3654 7999764489999999998543

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=93.69  E-value=0.039  Score=43.71  Aligned_cols=33  Identities=21%  Similarity=0.428  Sum_probs=25.6

Q ss_pred             cCCCCCCCC-----cCCCeeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCRWID-----CGGGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~~~~-----CggGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      +.|+|....     |.+ .|++.. ++|+|.|++||....
T Consensus       123 di~eC~~~~~~~~~C~~-~C~n~~-g~~~C~C~~Gy~l~~  160 (170)
T 1szb_A          123 DIDECQVAPGEAPTCDH-HCHNHL-GGFYCSCRAGYVLHR  160 (170)
T ss_dssp             ECCTTCCCTTSCCSSSS-EEEEET-TEEEEECCTTEEECT
T ss_pred             ccCcccCCCCCCCccCC-ccccCC-CCEEEeCCCCcEECC
Confidence            357887543     876 799875 789999999998544

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=93.60  E-value=0.038  Score=46.68  Aligned_cols=26  Identities=27%  Similarity=0.608  Sum_probs=20.7

Q ss_pred             CCCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           46 VTCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        46 ~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      .+|.+ |+|+.-      .+|+|.+||+|..|+
T Consensus       153 ~~C~ngG~Cv~P------~~C~C~~Gw~G~~C~  179 (188)
T 2ygo_A          153 GGCRNGGFCNER------RICECPDGFHGPHCE  179 (188)
T ss_dssp             TCCCTTCEECTT------SCEECCTTCBTTTTC
T ss_pred             CCCCCCCEeCCC------CcccCcCCCCCCCCc
Confidence            35675 599863      589999999999976

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=93.57  E-value=0.038  Score=56.85  Aligned_cols=36  Identities=17%  Similarity=0.498  Sum_probs=30.7

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecC-CCCccCcccc
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECD-LGWKQNTMAV   78 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~-pGwtg~~c~~   78 (216)
                      .+.|...+|.| |+|++.   ..+|.|+|. +||+|..|+.
T Consensus      1017 ~~~C~~~pC~ngG~C~~~---~~~~~C~C~~~g~~G~~C~~ 1054 (1245)
T 3qcw_A         1017 STTCQEDSCSNQGVCLQQ---WDGFSCDCSMTSFSGPLCND 1054 (1245)
T ss_dssp             CCCCCTTSSSSSCEEEEE---TTEEEEECTTSSCBSTTSCB
T ss_pred             cCceECCcCCCCCEeCCC---CCCCEEECCCCCCCCCCccC
Confidence            36899999997 699987   458999999 6999999863

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=93.44  E-value=0.046  Score=38.58  Aligned_cols=38  Identities=18%  Similarity=0.418  Sum_probs=25.3

Q ss_pred             CCCccC--CCCCCeeeccCCCCC-cceeecCCCCc----cCcccccCCC
Q 027951           41 NVCDKV--TCGKGKCKASQNSTF-FYECECDLGWK----QNTMAVDQNL   82 (216)
Q Consensus        41 ~~C~~~--~Cg~GtC~~~~~~~~-~Y~C~C~pGwt----g~~c~~~d~~   82 (216)
                      +.|...  .|.| .|+.+   +. +|+|.|.+||+    |..|.+++++
T Consensus         6 ~eC~~~nggC~h-~C~n~---~g~s~~C~C~~Gy~L~~D~~tC~d~dec   50 (69)
T 1kli_L            6 LICVNENGGCEQ-YCSDH---TGTKRSCRCHEGYSLLADGVSCTPTVEY   50 (69)
T ss_dssp             CCTTSGGGGCSS-EEEEE---TTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred             ccccCCCCCcCC-EeEcC---CCCCEEEeCCCCCeECCCCCcccCcccc
Confidence            457543  3665 68887   55 79999999997    4445544443

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=93.42  E-value=0.048  Score=50.95  Aligned_cols=34  Identities=15%  Similarity=0.125  Sum_probs=22.6

Q ss_pred             CCCCCCCcC-CCeeecCC---CCceeeecCCCCcCCCC
Q 027951          118 DLCRWIDCG-GGSCKNTS---MFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~---~~sY~C~C~~Gy~nlln  151 (216)
                      +.|....|. +|+|.+..   ..+++|.|++||.|..-
T Consensus       436 ~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~C  473 (525)
T 4aqs_A          436 YGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRC  473 (525)
T ss_dssp             TSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTT
T ss_pred             CCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCc
Confidence            456555665 55665432   24678999999999864

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=93.40  E-value=0.026  Score=45.29  Aligned_cols=16  Identities=19%  Similarity=0.150  Sum_probs=13.6

Q ss_pred             ccee-ecCCCCccCccc
Q 027951           62 FYEC-ECDLGWKQNTMA   77 (216)
Q Consensus        62 ~Y~C-~C~pGwtg~~c~   77 (216)
                      ..+| +|.+||+|.+|+
T Consensus        74 tG~C~~C~~g~~G~~Ce   90 (162)
T 1klo_A           74 TGECLKCIYNTAGFYCD   90 (162)
T ss_dssp             TCCBCCBCTTEETTTTC
T ss_pred             CCcccCCCCCCcCCCcC
Confidence            4689 599999999975

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=93.18  E-value=0.075  Score=36.26  Aligned_cols=24  Identities=25%  Similarity=0.469  Sum_probs=18.6

Q ss_pred             cCCCeeecCCCCceeeecCCCCcCC
Q 027951          125 CGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       125 CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      |.+ .|++...++|+|.|.+||.-.
T Consensus         9 C~~-~C~n~~~gs~~C~C~~Gy~L~   32 (59)
T 2wph_E            9 CEQ-FCKNSADNKVVCSCTEGYRLA   32 (59)
T ss_dssp             CSS-EEEECSTTCEEEECCTTEEEC
T ss_pred             cCC-EeEeCCCCCEEeeCCCCcEEC
Confidence            443 699876469999999999844

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=93.16  E-value=0.055  Score=48.42  Aligned_cols=33  Identities=24%  Similarity=0.556  Sum_probs=28.6

Q ss_pred             CCCCCCCCcC-CCeeecCCCCceeeecCC-CCcCCC
Q 027951          117 FDLCRWIDCG-GGSCKNTSMFSYSCQCAV-DHYNLL  150 (216)
Q Consensus       117 ~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~-Gy~nll  150 (216)
                      .++|..++|. +|+|+... .+|+|.|.. ||.|..
T Consensus       185 ~~~C~~~pC~n~g~C~~~~-~~~~C~C~~~~~~G~~  219 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQW-DGFSCDCSMTSFSGPL  219 (410)
T ss_dssp             SSCCCTTSSSTTCEEEECS-SSEEEECTTTSEESTT
T ss_pred             CCCcccccCCCCCEecCCC-CCceEeccCCcccCCC
Confidence            3789999999 88999864 789999996 999876

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=93.03  E-value=0.09  Score=48.19  Aligned_cols=45  Identities=7%  Similarity=-0.091  Sum_probs=29.3

Q ss_pred             CCeeeccCCCCCcceeecCCCCccCcccc-cCCCccCCccCCCCCCC
Q 027951           50 KGKCKASQNSTFFYECECDLGWKQNTMAV-DQNLKFLPCIAPDCTLN   95 (216)
Q Consensus        50 ~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~-~d~~~~lPC~ipnCt~n   95 (216)
                      ||.+..... ..++.|+|.+||+|.+|+. .+..--.||....|...
T Consensus       260 h~s~c~~~~-~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~  305 (375)
T 4aqt_A          260 HASECVKNE-FDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESA  305 (375)
T ss_dssp             SCSCEEECT-TSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCC
T ss_pred             CCcccCCCC-CCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCC
Confidence            664433222 5579999999999999985 44444566665544443

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=92.76  E-value=0.053  Score=42.92  Aligned_cols=29  Identities=21%  Similarity=0.637  Sum_probs=23.0

Q ss_pred             CCCccCC-----CCCCeeeccCCCCCcceeecCCCCcc
Q 027951           41 NVCDKVT-----CGKGKCKASQNSTFFYECECDLGWKQ   73 (216)
Q Consensus        41 ~~C~~~~-----Cg~GtC~~~~~~~~~Y~C~C~pGwtg   73 (216)
                      +.|....     |.+ +|+..   ..+|+|+|.+||+.
T Consensus       125 ~eC~~~~~~~~~C~~-~C~n~---~g~~~C~C~~Gy~l  158 (170)
T 1szb_A          125 DECQVAPGEAPTCDH-HCHNH---LGGFYCSCRAGYVL  158 (170)
T ss_dssp             CTTCCCTTSCCSSSS-EEEEE---TTEEEEECCTTEEE
T ss_pred             CcccCCCCCCCccCC-ccccC---CCCEEEeCCCCcEE
Confidence            5677544     777 79887   67899999999984

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=91.61  E-value=0.081  Score=34.89  Aligned_cols=22  Identities=23%  Similarity=0.548  Sum_probs=17.6

Q ss_pred             cCCCeeecCCCCceeeecCCCCcC
Q 027951          125 CGGGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       125 CggGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      |.+ .|++.. ++|+|.|++||.-
T Consensus         8 C~~-~C~n~~-gs~~C~C~~Gy~L   29 (51)
T 1kig_L            8 CDQ-FCREER-SEVRCSCAHGYVL   29 (51)
T ss_dssp             SSS-CCCEET-TEECCCCCTTEEE
T ss_pred             cCC-EeEcCC-CCeEEeCCCCcEE
Confidence            443 688865 7999999999974

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=91.58  E-value=0.11  Score=40.16  Aligned_cols=27  Identities=26%  Similarity=0.607  Sum_probs=21.0

Q ss_pred             CcC-CCeeecCC-CCce-eeecCCCCcCCC
Q 027951          124 DCG-GGSCKNTS-MFSY-SCQCAVDHYNLL  150 (216)
Q Consensus       124 ~Cg-gGtCv~~~-~~sY-~C~C~~Gy~nll  150 (216)
                      +|. +|+|++.. ..+| +|.|.+||+|..
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~   31 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH   31 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTT
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCcc
Confidence            577 78998863 1244 999999999986

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=91.50  E-value=0.044  Score=54.47  Aligned_cols=34  Identities=21%  Similarity=0.372  Sum_probs=24.6

Q ss_pred             CcC-CCeeecCCCCceeeecCCCCcCCCCC-CcccccccCC
Q 027951          124 DCG-GGSCKNTSMFSYSCQCAVDHYNLLNT-STFPCYKECS  162 (216)
Q Consensus       124 ~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~-t~~pC~~~Cs  162 (216)
                      .|+ ||.|+++     +|.|.+||.|..-. ..-||..+|+
T Consensus       540 ~C~ghG~C~~G-----~C~Cd~G~~G~~C~~~~~~~~~~~~  575 (725)
T 2e26_A          540 MCSGHGRCVQG-----SCVCDEQWGGLYCDEPETSLPTQLK  575 (725)
T ss_dssp             GGGGSEEEETT-----EEEECTTEESTTSCEESSCCCSCEE
T ss_pred             ccCCCcEECCC-----CEeeCCCccCCCcCccCCCCchhhh
Confidence            677 9999984     79999999997532 2344555554

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=91.11  E-value=0.1  Score=53.70  Aligned_cols=35  Identities=23%  Similarity=0.617  Sum_probs=30.3

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecC-CCCccCccc
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECD-LGWKQNTMA   77 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~-pGwtg~~c~   77 (216)
                      .+.|...+|.+ |+|++.   ..+|.|+|. +||+|..|+
T Consensus       619 ~~~C~~~pC~ngg~C~~~---~~~~~C~C~~~g~~G~~C~  655 (1245)
T 3qcw_A          619 AKPCLSNPCKNNGMCRDG---WNRYVCDCSGTGYLGRSCE  655 (1245)
T ss_dssp             SCGGGSCCCCTTCEEEEC---SSSEEEECTTTTEESTTSC
T ss_pred             CCCCCccCCCCCCEEeCC---CCCeEEECCCCCcccccCc
Confidence            46899999996 599986   458999999 799999986

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=90.99  E-value=0.046  Score=46.40  Aligned_cols=52  Identities=19%  Similarity=0.349  Sum_probs=31.5

Q ss_pred             cCCCC-CCeeeccCCCCCcceeecCCCC------ccCcccc-cCCCccC---Ccc-C--CCCCCCCCCCCCCCC
Q 027951           45 KVTCG-KGKCKASQNSTFFYECECDLGW------KQNTMAV-DQNLKFL---PCI-A--PDCTLNQDCAPSPSP  104 (216)
Q Consensus        45 ~~~Cg-~GtC~~~~~~~~~Y~C~C~pGw------tg~~c~~-~d~~~~l---PC~-i--pnCt~n~sC~~~~~~  104 (216)
                      ..+|. +|+|+.       .+|+|++||      +|..|+. .++|...   +|. +  +.|.. ..|.+.++|
T Consensus       142 ~~~Csg~G~C~~-------g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~-g~C~C~~G~  207 (217)
T 2p28_B          142 SIICSGLGDCVC-------GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGF  207 (217)
T ss_dssp             SCBGGGTEEEET-------TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEET-TEEEECTTE
T ss_pred             CCCCCCCCEEeC-------CceECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeC-CeeECCCCC
Confidence            35686 789984       379999995      8998872 3445433   454 2  34432 245554444

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=90.22  E-value=0.21  Score=38.69  Aligned_cols=34  Identities=21%  Similarity=0.449  Sum_probs=25.8

Q ss_pred             cCCCCCC---CCcCCCeeecCCCCceeeecCCCCcCCCC
Q 027951          116 IFDLCRW---IDCGGGSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       116 ~~DPC~~---~~CggGtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      +.|+|..   ..|+ +.|++.. ++|+|.|++||....|
T Consensus       116 d~~eC~~~~~~~C~-~~C~n~~-g~~~C~C~~Gy~l~~~  152 (159)
T 1nzi_A          116 DINECTDFVDVPCS-HFCNNFI-GGYFCSCPPEYFLHDD  152 (159)
T ss_dssp             ECCTTTC-CCCCSS-SEEEEET-TEEEEECCTTCEECTT
T ss_pred             cCcccCCCCCCCCC-CcccCcC-CCEEEecCCCcEECCC
Confidence            3578975   3576 4799874 7899999999996554

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=89.51  E-value=0.23  Score=41.86  Aligned_cols=30  Identities=23%  Similarity=0.537  Sum_probs=22.8

Q ss_pred             CCCCCCcC-CCeeecCCCCceeeecCCCCcCCCCCC
Q 027951          119 LCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLNTS  153 (216)
Q Consensus       119 PC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln~t  153 (216)
                      .|. ..|. ||+|+..    .+|+|++||.|..-.+
T Consensus       150 ~C~-~~C~ngG~Cv~P----~~C~C~~Gw~G~~C~~  180 (188)
T 2ygo_A          150 ECP-GGCRNGGFCNER----RICECPDGFHGPHCEG  180 (188)
T ss_dssp             CCT-TCCCTTCEECTT----SCEECCTTCBTTTTCB
T ss_pred             ccC-CCCCCCCEeCCC----CcccCcCCCCCCCCcC
Confidence            344 5676 8899984    4899999999987433

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=88.69  E-value=0.2  Score=33.28  Aligned_cols=24  Identities=25%  Similarity=0.506  Sum_probs=18.5

Q ss_pred             cCCCeeecCCCCceeeecCCCCcCC
Q 027951          125 CGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       125 CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      |.+ .|++..+++|+|.|.+||.-.
T Consensus         9 C~~-~C~n~~ggs~~C~C~~Gy~L~   32 (53)
T 2bz6_L            9 CEQ-YCSDHTGTKRSCRCHEGYSLL   32 (53)
T ss_dssp             CSS-EEEEETTTEEEEECCTTEEEC
T ss_pred             cCC-EeEcCCCCCEEeeCCCCCEEC
Confidence            544 699876448999999999844

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=88.33  E-value=0.24  Score=34.82  Aligned_cols=32  Identities=22%  Similarity=0.231  Sum_probs=23.6

Q ss_pred             CCCcc--CCCCC-CeeeccCCCCCcceee-cCCCCccCc
Q 027951           41 NVCDK--VTCGK-GKCKASQNSTFFYECE-CDLGWKQNT   75 (216)
Q Consensus        41 ~~C~~--~~Cg~-GtC~~~~~~~~~Y~C~-C~pGwtg~~   75 (216)
                      +.|..  .+|.+ ++|+.+   ..+|+|. |..||.+..
T Consensus         4 dEC~~~~~~C~~~~~C~Nt---~Gsy~C~~~~~g~~~~~   39 (71)
T 2kl7_A            4 NECLTIPEACKGEMKCINH---YGGYLCLPRSAAVINDL   39 (71)
T ss_dssp             CCTTCCCCSCTTEEEEEET---TCCEEEEETTSCCCSCC
T ss_pred             ccccCCCCCCCCCCEeECC---CCCeEecccCCcccccc
Confidence            56764  46975 599988   7799998 456887653

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=88.08  E-value=0.3  Score=37.71  Aligned_cols=31  Identities=26%  Similarity=0.493  Sum_probs=23.2

Q ss_pred             cCCCcc---CCCCCCeeeccCCCCCcceeecCCCCccC
Q 027951           40 ENVCDK---VTCGKGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        40 ~~~C~~---~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      .+.|..   ..|++ .|...   ..+|+|+|++||+..
T Consensus       117 ~~eC~~~~~~~C~~-~C~n~---~g~~~C~C~~Gy~l~  150 (159)
T 1nzi_A          117 INECTDFVDVPCSH-FCNNF---IGGYFCSCPPEYFLH  150 (159)
T ss_dssp             CCTTTC-CCCCSSS-EEEEE---TTEEEEECCTTCEEC
T ss_pred             CcccCCCCCCCCCC-cccCc---CCCEEEecCCCcEEC
Confidence            357765   35764 79876   668999999999953

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=87.59  E-value=0.34  Score=32.91  Aligned_cols=23  Identities=30%  Similarity=0.706  Sum_probs=17.9

Q ss_pred             CCCCCeeeccCCCC-CcceeecCCCCcc
Q 027951           47 TCGKGKCKASQNST-FFYECECDLGWKQ   73 (216)
Q Consensus        47 ~Cg~GtC~~~~~~~-~~Y~C~C~pGwtg   73 (216)
                      .|.| .|+.+   + .+|+|.|.+||+-
T Consensus         8 gC~~-~C~n~---~~gs~~C~C~~Gy~L   31 (59)
T 2wph_E            8 RCEQ-FCKNS---ADNKVVCSCTEGYRL   31 (59)
T ss_dssp             GCSS-EEEEC---STTCEEEECCTTEEE
T ss_pred             CcCC-EeEeC---CCCCEEeeCCCCcEE
Confidence            3655 68886   5 4899999999973

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=87.12  E-value=0.45  Score=36.35  Aligned_cols=53  Identities=15%  Similarity=0.386  Sum_probs=40.1

Q ss_pred             CCCCCCcC-CCeeecCCCCceeeecCCCCcCCCC----CCccccccc---CCcccccccCC
Q 027951          119 LCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLLN----TSTFPCYKE---CSIGMDCKNMG  171 (216)
Q Consensus       119 PC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nlln----~t~~pC~~~---CslG~dC~~lg  171 (216)
                      -|....|. +..|.+...+.+.|+|.+||.+...    ++..+|..+   |.--|+|...+
T Consensus         6 ~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~   66 (99)
T 1ob1_C            6 QCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEED   66 (99)
T ss_dssp             CCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCS
T ss_pred             EeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecC
Confidence            35556677 7789886668899999999998753    333577754   89999998775

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=84.68  E-value=0.58  Score=37.25  Aligned_cols=36  Identities=25%  Similarity=0.595  Sum_probs=25.1

Q ss_pred             CcC-CCeeecCC-CCce-eeecCCCCcCCCCCC--cccccc
Q 027951          124 DCG-GGSCKNTS-MFSY-SCQCAVDHYNLLNTS--TFPCYK  159 (216)
Q Consensus       124 ~Cg-gGtCv~~~-~~sY-~C~C~~Gy~nlln~t--~~pC~~  159 (216)
                      +|. ||+|+... ...| +|.|.+||.|.+-..  ...||.
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~~C~~   54 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYE   54 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSCCEEC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCceeccccccCCC
Confidence            688 88998752 1346 899999999987321  225664

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=84.02  E-value=0.38  Score=45.00  Aligned_cols=39  Identities=31%  Similarity=0.606  Sum_probs=0.0

Q ss_pred             CCccCC-CCCCCCCCCCCCCCcccccccCCCCcCCCCCCCCcC-CCeeecCC
Q 027951           85 LPCIAP-DCTLNQDCAPSPSPAQEKAAKKNESIFDLCRWIDCG-GGSCKNTS  134 (216)
Q Consensus        85 lPC~ip-nCt~n~sC~~~~~~~~~~~~~~n~s~~DPC~~~~Cg-gGtCv~~~  134 (216)
                      .||.++ .|..+..|.+.+++.     +      ..|..-.|. +|+|....
T Consensus       371 ~~C~ngg~C~~~~~C~C~~G~~-----G------~~Ce~c~C~~~g~C~~~~  411 (426)
T 3zyj_B          371 LHCQNGGTCHNNVRCLCPAAYT-----G------ILCEKLRCEEAGSCGSDS  411 (426)
T ss_dssp             ----------------------------------------------------
T ss_pred             ccCCCCCCcCCCCCCcCCCCCc-----C------CCCcCCCCCCCCcccCCC
Confidence            477755 688877888888772     2      347766787 78887643

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=83.35  E-value=0.46  Score=41.27  Aligned_cols=30  Identities=20%  Similarity=0.431  Sum_probs=17.1

Q ss_pred             CCCCC-CCcCCCeeecCCCCceeeecCCCCcCC
Q 027951          118 DLCRW-IDCGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       118 DPC~~-~~CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      |+|.. ..|.+ .|++.. ++|+|.|.+||.-.
T Consensus         2 ~ec~~~~~C~~-~C~n~~-g~~~C~C~~g~~l~   32 (349)
T 3v64_C            2 NECAEEGYCSQ-GCTNSE-GAFQCWCEAGYELR   32 (349)
T ss_dssp             -------CCSS-EECCC----CCEECCTTEEEC
T ss_pred             cccCCCCCCcC-eeecCC-CCeEEECCCCccCC
Confidence            56752 34665 799875 89999999999843

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	216
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.76
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.52
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.52
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.49
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.45
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.45
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.44
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.43
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.42
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.38
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.37
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.33
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.31
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.3
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.28
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.26
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.2
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.17
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.1
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.06
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.05
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	98.04
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	98.01
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.92
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.88
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.82
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.78
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.77
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.77
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.74
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.7
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.48
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.38
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.37
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	97.35
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.26
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.21
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.18
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.07
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.0
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.96
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	96.88
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	96.78
d1nt0a3	45	Mannose-binding protein associated serine protease	96.69
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.6
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.57
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	96.49
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	96.4
d1szba2	45	Mannose-binding protein associated serine protease	96.38
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	96.38
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	96.32
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	96.21
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.19
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	96.07
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	96.03
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	95.78
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	95.75
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	95.72
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	95.6
d1nt0a3	45	Mannose-binding protein associated serine protease	95.47
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	95.26
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	94.85
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	94.73
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	94.61
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	94.23
d1szba2	45	Mannose-binding protein associated serine protease	93.88
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	93.75
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	93.14
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	92.71
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	92.0
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	91.95
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	91.48
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	89.55
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	89.24
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	86.99
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	86.34
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	85.5
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	85.16
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	84.18
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	83.96
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	83.24
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	82.72

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.8e-09  Score=71.61  Aligned_cols=35  Identities=29%  Similarity=0.842  Sum_probs=32.1

Q ss_pred             cCCCccCCCCCCeeeccCCCCCcceeecCCCCccCccc
Q 027951           40 ENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        40 ~~~C~~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      .++|.+++|+||+|++.   ..+|+|+|.+||+|.+|+
T Consensus         8 ~~~C~~~PC~nG~C~~~---~~~y~C~C~~G~~G~~Ce   42 (48)
T d1autl1           8 EHPCASLCCGHGTCIDG---IGSFSCDCRSGWEGRFCQ   42 (48)
T ss_dssp             CCSSSSTTTTSEEECCC---SSCCCEEECTTEESTTSC
T ss_pred             CCcccCCCCCCCEEECC---CCCCeEeCCCCCcCCCcc
Confidence            56999999999999987   568999999999999987

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2.4e-08  Score=63.25  Aligned_cols=34  Identities=21%  Similarity=0.480  Sum_probs=30.3

Q ss_pred             CCCccCCCCCC-eeeccCCCCCcceeecCCCCccCccc
Q 027951           41 NVCDKVTCGKG-KCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        41 ~~C~~~~Cg~G-tC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      |.|...||+|| +|++.   ..+|+|+|.+||+|.+|+
T Consensus         2 d~C~~~PC~n~g~C~~~---~~~y~C~C~~G~~G~~Ce   36 (39)
T d2vj3a2           2 NECVSNPCQNDATCLDQ---IGEFQCICMPGYEGVHCE   36 (39)
T ss_dssp             CTTTTCCCCSSCEEEEC---SSCEEEECCTTEESSSSC
T ss_pred             cCCcCCCCCCCCEEECC---CCCEEEeCCCCCccCcCe
Confidence            68999999965 99987   568999999999999975

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=3.3e-08  Score=62.49  Aligned_cols=35  Identities=29%  Similarity=0.736  Sum_probs=31.2

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      .|.|...||.| |+|++.   ..+|+|+|.+||+|.+|+
T Consensus         3 ~d~C~~~PC~ngg~C~~~---~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           3 GDQCESNPCLNGGSCKDD---INSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEE---TTEEEEECCTTCCSTTSC
T ss_pred             cccCCCCCCCCCcEEEcC---CCCEEEECCCCCCCCCCC
Confidence            57999999997 599987   669999999999999864

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=4.3e-08  Score=61.95  Aligned_cols=34  Identities=35%  Similarity=0.561  Sum_probs=30.4

Q ss_pred             cCCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++|+|..++|. +|+|++.. ++|+|.|.+||+|..
T Consensus         2 d~d~C~~~PC~ngg~C~~~~-~~y~C~C~~g~~G~~   36 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDI-NSYECWCPFGFEGKN   36 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEET-TEEEEECCTTCCSTT
T ss_pred             ccccCCCCCCCCCcEEEcCC-CCEEEECCCCCCCCC
Confidence            46999999999 88999965 799999999999975

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.45  E-value=3.4e-08  Score=61.79  Aligned_cols=35  Identities=23%  Similarity=0.556  Sum_probs=30.4

Q ss_pred             cCCCccCCCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           40 ENVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        40 ~~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      .|.|...||.| |+|++.   ..+|+|.|.+||+|.+|+
T Consensus         2 ~d~C~~~PC~ngg~C~~~---~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQ---LQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEE---TTEEEEECCTTEESTTSC
T ss_pred             cccCCCCCCCCCCEEECC---CCCeEEECCCCCcCCCCC
Confidence            46899999996 599987   668999999999999863

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=4.2e-08  Score=62.06  Aligned_cols=34  Identities=29%  Similarity=0.727  Sum_probs=30.1

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      |.|...||+| |+|++.   ..+|+|.|.+||+|.+|+
T Consensus         1 D~C~~~PC~ngg~C~~~---~~~y~C~C~~G~~G~~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDG---LGEYTCTCLEGFEGKNCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCC---SSSCCEECCTTEETTTTC
T ss_pred             CcCCCCCCCCCcEEECC---CCCEEEECCCCCCcCcCe
Confidence            5799999996 699987   568999999999999976

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=6.4e-08  Score=61.21  Aligned_cols=33  Identities=15%  Similarity=0.395  Sum_probs=29.7

Q ss_pred             CCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          117 FDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       117 ~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      +|+|..++|. +|+|++.. ++|+|.|.+||+|.+
T Consensus         1 Id~C~~~PC~n~g~C~~~~-~~y~C~C~~G~~G~~   34 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQI-GEFQCICMPGYEGVH   34 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECS-SCEEEECCTTEESSS
T ss_pred             CcCCcCCCCCCCCEEECCC-CCEEEeCCCCCccCc
Confidence            4899999999 88999865 799999999999986

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=5.9e-08  Score=59.94  Aligned_cols=34  Identities=24%  Similarity=0.675  Sum_probs=29.8

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      |.|...||+| |+|++.   ..+|+|.|.+||+|.+|+
T Consensus         1 d~C~~~PC~ngg~C~~~---~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDK---INEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEEC---SSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCCcEEECC---CCCeEEECCCCCCCCCcC
Confidence            5799999997 699987   558999999999999863

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.42  E-value=3.8e-08  Score=61.56  Aligned_cols=33  Identities=36%  Similarity=0.594  Sum_probs=29.7

Q ss_pred             CCCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          117 FDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       117 ~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      +|+|..++|. +|+|++.. ++|+|.|.+||+|..
T Consensus         2 ~d~C~~~PC~ngg~C~~~~-~~y~C~C~~g~~G~~   35 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQL-QSYICFCLPAFEGRN   35 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEET-TEEEEECCTTEESTT
T ss_pred             cccCCCCCCCCCCEEECCC-CCeEEECCCCCcCCC
Confidence            5899999998 88999965 799999999999975

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=5.3e-08  Score=61.80  Aligned_cols=35  Identities=26%  Similarity=0.662  Sum_probs=30.7

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      +.|...+|.| |+|++.   ..+|+|+|.+||+|.+|+.
T Consensus         2 ~~C~~~pC~ngg~C~~~---~~~y~C~C~~g~~G~~Ce~   37 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLET---IGNYTCSCYPGFYGPECEY   37 (40)
T ss_dssp             CCCCTTGGGGSEEEEEC---SSSEEEEECTTEESTTSCE
T ss_pred             CcccCCcCCCCcEEECC---CCCeEEeCCCCccCCCCCC
Confidence            5799999995 699987   5689999999999999874

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.5e-07  Score=59.96  Aligned_cols=35  Identities=20%  Similarity=0.611  Sum_probs=29.2

Q ss_pred             CccCCCCC-CeeeccCCCCCcceeecCCCCccCcccc
Q 027951           43 CDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        43 C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      |...||.| |+|++..+ ..+|+|+|.+||+|.+|+.
T Consensus         1 C~~nPC~ngG~C~~~~~-~~~y~C~C~~g~~G~~Ce~   36 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALY-FSDFVCQCPEGFAGKSCEI   36 (41)
T ss_dssp             CSSCCSCTTCEEEEESS-SSCEEEECCTTCBSSSCCB
T ss_pred             CcCCCCCCCCEEecCCC-CCCeEECCCCCCCCCCcCc
Confidence            67889997 59998643 4589999999999999873

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=7.2e-08  Score=60.86  Aligned_cols=34  Identities=26%  Similarity=0.750  Sum_probs=30.4

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      +.|...+|+| |+|++.   ..+|+|.|.+||+|.+|+
T Consensus         2 ~~C~~~pC~ngg~C~~~---~~~~~C~C~~g~~G~~Ce   36 (39)
T d1g1ta2           2 AACTNTSCSGHGECVET---INNYTCKCDPGFSGLKCE   36 (39)
T ss_dssp             CCCCTTGGGGSEEEEEE---TTEEEEEECTTEESTTSC
T ss_pred             CcccCCcCCCCcEEECC---CCCEEEeCCCCCcCcCcC
Confidence            5899999996 699987   568999999999999976

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=2e-07  Score=57.45  Aligned_cols=32  Identities=25%  Similarity=0.613  Sum_probs=28.7

Q ss_pred             CCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          118 DLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      |+|..++|. +|+|++.. ++|+|.|.+||.|..
T Consensus         1 d~C~~~PC~ngg~C~~~~-~~y~C~C~~g~~G~~   33 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKI-NEFQCECPTGFTGHL   33 (35)
T ss_dssp             CTTTTCCSTTTCEEEECS-SCEEEECCTTEESSS
T ss_pred             CCCCCCCCCCCcEEECCC-CCeEEECCCCCCCCC
Confidence            689999999 88999865 789999999999975

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.5e-07  Score=62.00  Aligned_cols=33  Identities=27%  Similarity=0.589  Sum_probs=30.1

Q ss_pred             CCCCCCCCcCCCeeecCCCCceeeecCCCCcCCC
Q 027951          117 FDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       117 ~DPC~~~~CggGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      .|||..++|++|+|++.. ++|+|.|++||+|..
T Consensus         8 ~~~C~~~PC~nG~C~~~~-~~y~C~C~~G~~G~~   40 (48)
T d1autl1           8 EHPCASLCCGHGTCIDGI-GSFSCDCRSGWEGRF   40 (48)
T ss_dssp             CCSSSSTTTTSEEECCCS-SCCCEEECTTEESTT
T ss_pred             CCcccCCCCCCCEEECCC-CCCeEeCCCCCcCCC
Confidence            489999999999999875 789999999999986

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.6e-07  Score=58.84  Aligned_cols=34  Identities=32%  Similarity=0.502  Sum_probs=29.0

Q ss_pred             cCCCCC--CCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCR--WIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~--~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++|+|.  .++|. +|+|++.. ++|+|.|.+||+|..
T Consensus         2 DideC~~~~~pC~n~g~C~n~~-g~y~C~C~~G~~G~~   38 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTL-GSFECQCLQGYTGPR   38 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECS-SSEEEECCTTEESTT
T ss_pred             CCccccCCCCCCCCCcEeECCC-CCEEeECCCCCcCCC
Confidence            458887  47898 89999975 789999999999874

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.1e-07  Score=58.75  Aligned_cols=32  Identities=28%  Similarity=0.581  Sum_probs=28.9

Q ss_pred             CCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          118 DLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      |+|..++|. +|+|++.. ++|+|.|.+||+|..
T Consensus         1 D~C~~~PC~ngg~C~~~~-~~y~C~C~~G~~G~~   33 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGL-GEYTCTCLEGFEGKN   33 (39)
T ss_dssp             CTTTTCCCCSSCEECCCS-SSCCEECCTTEETTT
T ss_pred             CcCCCCCCCCCcEEECCC-CCEEEECCCCCCcCc
Confidence            689999999 89999865 789999999999986

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=1.9e-07  Score=58.84  Aligned_cols=32  Identities=28%  Similarity=0.674  Sum_probs=29.1

Q ss_pred             CCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          118 DLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      |+|..++|. +|+|++.. ++|+|.|.+||+|..
T Consensus         2 ~~C~~~pC~ngg~C~~~~-~~~~C~C~~g~~G~~   34 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETI-NNYTCKCDPGFSGLK   34 (39)
T ss_dssp             CCCCTTGGGGSEEEEEET-TEEEEEECTTEESTT
T ss_pred             CcccCCcCCCCcEEECCC-CCEEEeCCCCCcCcC
Confidence            789999999 88999865 799999999999986

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=5e-07  Score=57.45  Aligned_cols=34  Identities=26%  Similarity=0.665  Sum_probs=28.5

Q ss_pred             CCCc--cCCCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           41 NVCD--KVTCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        41 ~~C~--~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      |.|.  ..+|.+ |+|+++   ..+|+|+|.+||+|.+|+
T Consensus         4 deC~~~~~pC~n~g~C~n~---~g~y~C~C~~G~~G~~Ce   40 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCINT---LGSFECQCLQGYTGPRCE   40 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEEC---SSSEEEECCTTEESTTSC
T ss_pred             ccccCCCCCCCCCcEeECC---CCCEEeECCCCCcCCCCc
Confidence            4565  578985 699987   778999999999999865

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=5.1e-07  Score=57.11  Aligned_cols=32  Identities=28%  Similarity=0.671  Sum_probs=29.0

Q ss_pred             CCCCCCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          118 DLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      |.|..++|. +|+|++.. ++|+|.|.+||.|..
T Consensus         2 ~~C~~~pC~ngg~C~~~~-~~y~C~C~~g~~G~~   34 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETI-GNYTCSCYPGFYGPE   34 (40)
T ss_dssp             CCCCTTGGGGSEEEEECS-SSEEEEECTTEESTT
T ss_pred             CcccCCcCCCCcEEECCC-CCeEEeCCCCccCCC
Confidence            689999998 88999975 789999999999986

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.06  E-value=6.8e-07  Score=57.08  Aligned_cols=34  Identities=21%  Similarity=0.533  Sum_probs=29.3

Q ss_pred             CCCCCCCCcC-CCeeecCCCCceeeecCC-CCcCCC
Q 027951          117 FDLCRWIDCG-GGSCKNTSMFSYSCQCAV-DHYNLL  150 (216)
Q Consensus       117 ~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~-Gy~nll  150 (216)
                      +|+|..++|. +|+|++....+|+|.|.. ||+|..
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~   37 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPN   37 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTT
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcC
Confidence            4899999999 799997545789999986 999986

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.05  E-value=9e-07  Score=56.49  Aligned_cols=35  Identities=26%  Similarity=0.584  Sum_probs=29.5

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecCC-CCccCccc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECDL-GWKQNTMA   77 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~p-Gwtg~~c~   77 (216)
                      |.|...+|+| |+|++..  ..+|+|+|.+ ||+|.+|+
T Consensus         3 d~C~~nPC~ngG~C~~~~--~~~y~C~C~~~G~~G~~Ce   39 (42)
T d1q4ga2           3 NPCCYYPCQHQGICVRFG--LDRYQCDCTRTGYSGPNCT   39 (42)
T ss_dssp             CGGGGCCCCTTCEEEEET--TTEEEEECTTSSEETTTTC
T ss_pred             ccCcCCCCCCCCEeeeCC--CCCEEEECCCCCcCCcCcC
Confidence            6899999997 6999753  4589999986 99999965

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=9.6e-07  Score=56.09  Aligned_cols=35  Identities=26%  Similarity=0.680  Sum_probs=29.1

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecC-CCCccCccc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECD-LGWKQNTMA   77 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~-pGwtg~~c~   77 (216)
                      |+|...+|+| |+|++..  ..+|+|+|. +||+|.+|+
T Consensus         2 d~C~~~PC~ngG~C~~~~--~~~y~C~C~~~gy~G~~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTG--FDQYKCDCTRTGFYGENCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEE--TTEEEEECTTSSEETTTTC
T ss_pred             CcCcCCCCCCCCEEEECC--CCCEEEeCcCCCcCCcCcC
Confidence            6899999997 5998753  348999995 799999965

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.01  E-value=1.2e-06  Score=55.71  Aligned_cols=33  Identities=27%  Similarity=0.654  Sum_probs=28.5

Q ss_pred             CCCCCCCcC-CCeeecCCCCceeeecC-CCCcCCC
Q 027951          118 DLCRWIDCG-GGSCKNTSMFSYSCQCA-VDHYNLL  150 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~~~~sY~C~C~-~Gy~nll  150 (216)
                      |||..++|. +|+|++....+|+|.|. +||+|..
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~   36 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGEN   36 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTT
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcC
Confidence            799999999 88998754468999995 6999986

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=2.6e-06  Score=54.92  Aligned_cols=34  Identities=32%  Similarity=0.615  Sum_probs=28.3

Q ss_pred             cCCCCCC--CCcCCCeeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCRW--IDCGGGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~~--~~CggGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++|+|..  ..|.+++|+|+. ++|+|.|++||++..
T Consensus         2 DidEC~~~~~~C~~~~C~Nt~-Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           2 DIDECRISPDLCGRGQCVNTP-GDFECKCDEGYESGF   37 (44)
T ss_dssp             CCCTTTTCSSTTTTSCEEEET-TEEEECCCSSEEECT
T ss_pred             cccccCCCCCCCCCCEeEcCC-CCeEEeCCCCCccCC
Confidence            5789975  358888999986 899999999998753

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.7e-06  Score=55.12  Aligned_cols=32  Identities=41%  Similarity=0.849  Sum_probs=25.8

Q ss_pred             CCCCCC--CCcCCCeeecCCCCceeeecCCCCcCC
Q 027951          117 FDLCRW--IDCGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       117 ~DPC~~--~~CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      +|+|..  ..|.+|.|+|+. ++|+|.|++||.-.
T Consensus         2 idEC~~~~~~C~~~~C~Nt~-Gsy~C~C~~Gy~l~   35 (42)
T d1lmja2           2 IDECQRDPLLCRGGVCHNTE-GSYRCECPPGHQLS   35 (42)
T ss_dssp             CCHHHHCSSTTTTSEEEEET-TEEEEESCTTSCCC
T ss_pred             ccccCCCCCCCCCCEeECCC-CCeEEeCCCCCeEC
Confidence            467754  357789999986 89999999999843

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=5e-06  Score=52.91  Aligned_cols=33  Identities=33%  Similarity=0.505  Sum_probs=26.6

Q ss_pred             cCCCCCCC-CcCCCeeecCCCCceeeecCCCCcCC
Q 027951          116 IFDLCRWI-DCGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       116 ~~DPC~~~-~CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      ++|+|... .|.+|.|++.. ++|+|.|++||...
T Consensus         2 DidEC~~~~~~c~~~C~Nt~-G~y~C~C~~Gy~l~   35 (43)
T d1uzka1           2 DVNECLDPTTCISGNCVNTP-GSYICDCPPDFELN   35 (43)
T ss_dssp             CCCGGGSTTSSBTSEEEEET-TEEEEECCTTCEEC
T ss_pred             CccccCCCCcCcCCEeECCC-CCEEEecCCCCEEC
Confidence            56889764 34588999986 89999999999743

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=8.4e-06  Score=51.53  Aligned_cols=31  Identities=26%  Similarity=0.633  Sum_probs=26.0

Q ss_pred             CCCCCcC-CCeeecCC-CCceeeecCCCCcCCC
Q 027951          120 CRWIDCG-GGSCKNTS-MFSYSCQCAVDHYNLL  150 (216)
Q Consensus       120 C~~~~Cg-gGtCv~~~-~~sY~C~C~~Gy~nll  150 (216)
                      |..++|. +|+|+... ..+|+|+|.+||+|..
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~   33 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKS   33 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTTCBSSS
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCCCCCCC
Confidence            6678888 88999753 4689999999999986

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=3.9e-06  Score=57.30  Aligned_cols=38  Identities=21%  Similarity=0.446  Sum_probs=30.1

Q ss_pred             CCCccCCCCC-Ceeecc--CCCCCcceeecCCCCccCcccc
Q 027951           41 NVCDKVTCGK-GKCKAS--QNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~--~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      +.|.+.+|+| |+|...  .+...+|+|+|.+||+|.+|+.
T Consensus         7 ~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~   47 (63)
T d1haea_           7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE   47 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred             CCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcCC
Confidence            4588899998 699642  1235689999999999999873

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.77  E-value=1.1e-05  Score=53.66  Aligned_cols=37  Identities=19%  Similarity=0.426  Sum_probs=29.9

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      +.|...+|.| |+|+.... ..+|+|+|.+||+|.+|+.
T Consensus         7 ~~c~~~~C~NgG~C~~~~~-~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIES-LDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESS-SSCEEEECCTTCCSSSSCC
T ss_pred             CCCCCCCCCCCcEeeccCC-CCCeEeECCCCCcCCCCcc
Confidence            3677889998 79986532 4589999999999999863

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=5.9e-06  Score=53.94  Aligned_cols=37  Identities=19%  Similarity=0.401  Sum_probs=29.8

Q ss_pred             CCCccCCCCC-CeeeccCCCCCcceeecCCCCccCcccc
Q 027951           41 NVCDKVTCGK-GKCKASQNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        41 ~~C~~~~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      ++|.+.+|.| |+|+...+ ..+|+|+|.+||+|.+|+.
T Consensus         5 ~~c~~~~C~ngG~C~~~~~-~~~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEA-LDKYACNCVVGYIGERCQY   42 (48)
T ss_dssp             CSTTCCEECTTCEEEEETT-TTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCCCCCCcEEeeeCC-CCCeEEeCCCCcccCCCCc
Confidence            3677788998 79986532 4589999999999999873

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=5.5e-06  Score=52.90  Aligned_cols=32  Identities=34%  Similarity=0.576  Sum_probs=26.9

Q ss_pred             cCCCCCCCCcC-CCeeecCCCCceeeecCCCCcC
Q 027951          116 IFDLCRWIDCG-GGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       116 ~~DPC~~~~Cg-gGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      ++|+|....+. +++|+|+. ++|+|.|++||.+
T Consensus         4 DidEC~~~~~~~~~~C~Nt~-Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           4 DMDECKEPDVCKHGQCINTD-GSYRCECPFGYIL   36 (43)
T ss_dssp             CCCSSSSTTSCSSSCCCCCS-SCCCCCCCTTEEE
T ss_pred             ceeccCCcCCCCCCEeECCC-CCeEeECCCCccc
Confidence            46889876655 78999976 8999999999985

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=1.4e-05  Score=50.93  Aligned_cols=34  Identities=35%  Similarity=0.589  Sum_probs=26.9

Q ss_pred             cCCCCCC--CCcCCCeeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCRW--IDCGGGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~~--~~CggGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++|+|..  ..|.+++|+++. ++|+|.|++||....
T Consensus         2 DinEC~~~~~~c~~~~C~Nt~-Gsy~C~C~~Gy~l~~   37 (43)
T d1uzka2           2 DIDECQELPGLCQGGKCINTF-GSFQCRCPTGYYLNE   37 (43)
T ss_dssp             ECCHHHHCGGGGBTSEEEECS-SCEEEECCTTCCBCT
T ss_pred             CcccccCCCCCcCCCEEECCC-CCeEeECCCCCeECc
Confidence            3577864  457778999986 899999999998543

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=3.9e-05  Score=47.74  Aligned_cols=29  Identities=34%  Similarity=0.796  Sum_probs=25.3

Q ss_pred             CCCCC-CCcCCCeeecCCCCceeeecCCCCc
Q 027951          118 DLCRW-IDCGGGSCKNTSMFSYSCQCAVDHY  147 (216)
Q Consensus       118 DPC~~-~~CggGtCv~~~~~sY~C~C~~Gy~  147 (216)
                      |+|.. ++||+|+|.+-. ++|.|.|.+||.
T Consensus         2 dECsignpCGnGTCtNvi-GgFec~C~~GFe   31 (39)
T d1emoa2           2 DECSVGNPCGNGTCKNVI-GGFECTCEEGFE   31 (39)
T ss_dssp             CGGGTTCSSSSSCEEECS-SSEEECCSSSSC
T ss_pred             CccccCCccCCceeeecc-cceEEeecCCcC
Confidence            67865 789999999965 899999999996

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.37  E-value=8.9e-05  Score=49.04  Aligned_cols=34  Identities=26%  Similarity=0.396  Sum_probs=27.8

Q ss_pred             CCCCCCCcC-CCeeecC-CCCceeeecCCCCcCCCC
Q 027951          118 DLCRWIDCG-GGSCKNT-SMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~-~~~sY~C~C~~Gy~nlln  151 (216)
                      +||..++|. +|+|+.. ...+|+|+|.+||+|..-
T Consensus         7 ~~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~C   42 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC   42 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESSSSCEEEECCTTCCSSSS
T ss_pred             CCCCCCCCCCCcEeeccCCCCCeEeECCCCCcCCCC
Confidence            578888998 6999753 346899999999999863

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=6.9e-05  Score=48.53  Aligned_cols=35  Identities=17%  Similarity=0.319  Sum_probs=27.6

Q ss_pred             CccCCCCCCeeeccCCCCCcceeecCCCCccCcccc
Q 027951           43 CDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        43 C~~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      +.+..|.||+|.-..+ ...|.|.|.+||+|.+|++
T Consensus         9 ~~~~yC~nG~C~~~~~-~~~~~C~C~~gY~G~RCe~   43 (46)
T d1k36a_           9 DMNGYCLHGQCIYLVD-MSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             TCCSSCSSEEEEEETT-TTEEEEEECTTCSSTTSCC
T ss_pred             cCCCcCcCCEEEEeCC-CCccEeECCCCceecCcee
Confidence            3456899999975322 4589999999999999874

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=6.3e-05  Score=48.84  Aligned_cols=33  Identities=24%  Similarity=0.411  Sum_probs=27.5

Q ss_pred             CCCCCCCcC-CCeeecC-CCCceeeecCCCCcCCC
Q 027951          118 DLCRWIDCG-GGSCKNT-SMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~~-~~~sY~C~C~~Gy~nll  150 (216)
                      ++|..++|. +|+|+.. ...+|+|+|..||+|..
T Consensus         5 ~~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~   39 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGER   39 (48)
T ss_dssp             CSTTCCEECTTCEEEEETTTTEEEEEECTTEESTT
T ss_pred             CCCCCCCCCCCcEEeeeCCCCCeEEeCCCCcccCC
Confidence            578888998 6999853 34689999999999986

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=8.6e-05  Score=46.16  Aligned_cols=30  Identities=33%  Similarity=0.886  Sum_probs=25.1

Q ss_pred             CCCc-cCCCCCCeeeccCCCCCcceeecCCCCcc
Q 027951           41 NVCD-KVTCGKGKCKASQNSTFFYECECDLGWKQ   73 (216)
Q Consensus        41 ~~C~-~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg   73 (216)
                      |.|+ .++|++|||...   ..+|+|.|..||.-
T Consensus         2 dECsignpCGnGTCtNv---iGgFec~C~~GFep   32 (39)
T d1emoa2           2 DECSVGNPCGNGTCKNV---IGGFECTCEEGFEP   32 (39)
T ss_dssp             CGGGTTCSSSSSCEEEC---SSSEEECCSSSSCC
T ss_pred             CccccCCccCCceeeec---ccceEEeecCCcCC
Confidence            4565 468999999987   77999999999973

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=4.1e-05  Score=51.99  Aligned_cols=35  Identities=23%  Similarity=0.330  Sum_probs=27.7

Q ss_pred             CCCCCCCcC-CCeeec----CCCCceeeecCCCCcCCCCC
Q 027951          118 DLCRWIDCG-GGSCKN----TSMFSYSCQCAVDHYNLLNT  152 (216)
Q Consensus       118 DPC~~~~Cg-gGtCv~----~~~~sY~C~C~~Gy~nlln~  152 (216)
                      |+|..++|. +|+|..    ....+|+|+|.+||+|..-.
T Consensus         7 ~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce   46 (63)
T d1haea_           7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             CCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcC
Confidence            678889998 799952    22368999999999998743

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=7e-05  Score=47.11  Aligned_cols=27  Identities=15%  Similarity=0.552  Sum_probs=22.5

Q ss_pred             CCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          123 IDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       123 ~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      +.|. +.+|+++. ++|+|+|++||+|..
T Consensus         7 ~~C~~~A~C~Nt~-Gsy~C~C~~Gy~GdG   34 (40)
T d1gl4a2           7 HQCSVHAECRDYA-TGFCCRCVANYTGNG   34 (40)
T ss_dssp             GGSCTTEEEEECS-SCEEEEECTTEEECS
T ss_pred             CCCCCCCEeecCC-CCeEeECCCCCcCCC
Confidence            4566 78999976 799999999999854

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00013  Score=46.68  Aligned_cols=32  Identities=31%  Similarity=0.859  Sum_probs=26.8

Q ss_pred             CCCccC--CCCCCeeeccCCCCCcceeecCCCCccCc
Q 027951           41 NVCDKV--TCGKGKCKASQNSTFFYECECDLGWKQNT   75 (216)
Q Consensus        41 ~~C~~~--~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~   75 (216)
                      |.|+..  .|.+|+|+.+   +++|+|.|.+||++..
T Consensus         4 dEC~~~~~~C~~~~C~Nt---~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           4 DECRISPDLCGRGQCVNT---PGDFECKCDEGYESGF   37 (44)
T ss_dssp             CTTTTCSSTTTTSCEEEE---TTEEEECCCSSEEECT
T ss_pred             cccCCCCCCCCCCEeEcC---CCCeEEeCCCCCccCC
Confidence            567654  5889999998   7899999999999864

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00011  Score=46.39  Aligned_cols=31  Identities=29%  Similarity=0.743  Sum_probs=25.1

Q ss_pred             CCCccC--CCCCCeeeccCCCCCcceeecCCCCccC
Q 027951           41 NVCDKV--TCGKGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        41 ~~C~~~--~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      |.|+..  .|.+|+|+.+   +++|+|.|++||+..
T Consensus         3 dEC~~~~~~C~~~~C~Nt---~Gsy~C~C~~Gy~l~   35 (42)
T d1lmja2           3 DECQRDPLLCRGGVCHNT---EGSYRCECPPGHQLS   35 (42)
T ss_dssp             CHHHHCSSTTTTSEEEEE---TTEEEEESCTTSCCC
T ss_pred             cccCCCCCCCCCCEeECC---CCCeEEeCCCCCeEC
Confidence            345544  4789999998   789999999999964

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00039  Score=45.44  Aligned_cols=23  Identities=22%  Similarity=0.252  Sum_probs=19.0

Q ss_pred             CCeeecCCCCceeeecCCCCcCCC
Q 027951          127 GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       127 gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ...|+|+. ++|+|.|++||....
T Consensus        23 ~~~C~Nt~-GsY~C~C~~Gy~l~~   45 (53)
T d1apqa_          23 QHLCHNYV-GGYFCSCRPGYELQE   45 (53)
T ss_dssp             SSEEEEET-TEEEEECSTTCEECT
T ss_pred             cCEeEcCC-CCeEeECCCCCeECC
Confidence            34799986 899999999998443

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00014  Score=45.78  Aligned_cols=32  Identities=28%  Similarity=0.520  Sum_probs=24.3

Q ss_pred             CCCCCC-CCcCCCeeecCCCCceeeecCCCCcCCC
Q 027951          117 FDLCRW-IDCGGGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       117 ~DPC~~-~~CggGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      +|+|.. ..|. ..|+++. ++|+|.|++||+...
T Consensus         2 idEC~~~~~C~-~~C~N~~-Gsy~C~C~~Gy~l~g   34 (40)
T d1dx5i3           2 IDECENGGFCS-GVCHNLP-GTFECICGPDSALAG   34 (40)
T ss_dssp             CCHHHHCSSCS-SEEEECS-SSEEEEECSSSSCEE
T ss_pred             ccccCCCcCcc-CEeeCCC-CCeEeECCCCCeeCC
Confidence            456653 3454 5899976 899999999999754

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.69  E-value=0.00037  Score=44.34  Aligned_cols=22  Identities=27%  Similarity=0.427  Sum_probs=18.3

Q ss_pred             CCeeecCCCCceeeecCCCCcCC
Q 027951          127 GGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       127 gGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      ...|+++. ++|+|.|++||.-.
T Consensus        15 ~~~C~Nt~-gsy~C~C~~Gy~L~   36 (45)
T d1nt0a3          15 DHYCHNYL-GGYYCSCRVGYILH   36 (45)
T ss_dssp             SSEEEEET-TEEEEECCTTEEEC
T ss_pred             CCEeecCC-CCEEEeCCCCCEEC
Confidence            34899976 89999999999743

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0004  Score=43.88  Aligned_cols=31  Identities=26%  Similarity=0.668  Sum_probs=25.2

Q ss_pred             cCCCccCCCC-CCeeeccCCCCCcceeecCCCCcc
Q 027951           40 ENVCDKVTCG-KGKCKASQNSTFFYECECDLGWKQ   73 (216)
Q Consensus        40 ~~~C~~~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg   73 (216)
                      .|.|+...+. +++|+.+   +++|+|+|.+||++
T Consensus         5 idEC~~~~~~~~~~C~Nt---~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           5 MDECKEPDVCKHGQCINT---DGSYRCECPFGYIL   36 (43)
T ss_dssp             CCSSSSTTSCSSSCCCCC---SSCCCCCCCTTEEE
T ss_pred             eeccCCcCCCCCCEeECC---CCCeEeECCCCccc
Confidence            5678766544 6799988   78999999999985

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.0007  Score=42.53  Aligned_cols=31  Identities=32%  Similarity=0.679  Sum_probs=25.0

Q ss_pred             CCCccC-CCCCCeeeccCCCCCcceeecCCCCccC
Q 027951           41 NVCDKV-TCGKGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        41 ~~C~~~-~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      |.|+.. .|.+|+|+.+   +++|+|.|.+||+..
T Consensus         4 dEC~~~~~~c~~~C~Nt---~G~y~C~C~~Gy~l~   35 (43)
T d1uzka1           4 NECLDPTTCISGNCVNT---PGSYICDCPPDFELN   35 (43)
T ss_dssp             CGGGSTTSSBTSEEEEE---TTEEEEECCTTCEEC
T ss_pred             cccCCCCcCcCCEeECC---CCCEEEecCCCCEEC
Confidence            567654 4558999998   789999999999754

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00069  Score=44.30  Aligned_cols=32  Identities=25%  Similarity=0.273  Sum_probs=24.5

Q ss_pred             cCCCCCC-eeeccCCCCCcceeecCCCCccCcccc
Q 027951           45 KVTCGKG-KCKASQNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        45 ~~~Cg~G-tC~~~~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      +..|.|| +|...+  ...+.|.|..||+|.+|+.
T Consensus        13 ~~yC~nGgcc~~~~--~~~~~C~C~~gy~G~rCe~   45 (50)
T d1ioxa_          13 KHYCIKGRCRFVVA--EQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             TTSCTTCCEEEETT--TTEEEECCCTTEETTTTCE
T ss_pred             CCCccCCeEEEeCC--CCCcEeECCCCCeeCCCcc
Confidence            3569998 554432  4579999999999999874

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.001  Score=41.47  Aligned_cols=30  Identities=30%  Similarity=0.505  Sum_probs=22.9

Q ss_pred             CCCCC-CCcCCCeeecCCCCceeeecCCCCcCC
Q 027951          118 DLCRW-IDCGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       118 DPC~~-~~CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      |+|.. ..|. ..|+++. ++|+|.|++||.-.
T Consensus         2 dEC~~~~~C~-~~C~n~~-Gsy~C~C~~Gy~L~   32 (41)
T d1i0ua2           2 DECQDPDTCS-QLCVNLE-GGYKCQCEEGFQLD   32 (41)
T ss_dssp             CTTTTTTSCS-SCEECSS-SCCEECCCTTEEEC
T ss_pred             ccCCCCCCCC-CEeECCC-CCEEeECCCCCeEC
Confidence            67754 3454 4899976 89999999999843

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00092  Score=42.39  Aligned_cols=32  Identities=19%  Similarity=0.312  Sum_probs=23.2

Q ss_pred             CCCCCC---CcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          118 DLCRWI---DCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~~~---~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      |+|...   .++ ...|+++. ++|+|.|.+||.-.-
T Consensus         2 dEC~~~~~~~~~C~~~C~Nt~-Gsy~C~C~~Gy~l~~   37 (45)
T d1szba2           2 DECQVAPGEAPTCDHHCHNHL-GGFYCSCRAGYVLHR   37 (45)
T ss_dssp             CTTCCCTTSCCSSSSEEEEET-TEEEEECCTTEEECT
T ss_pred             cCCcCCCCCCCCCCCCCccCC-CCeEEECCCCCeECC
Confidence            566543   123 45899976 899999999998543

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00082  Score=41.91  Aligned_cols=30  Identities=20%  Similarity=0.523  Sum_probs=23.7

Q ss_pred             CCCCCCCC--cCCCeeecCCCCceeeecCCCCcC
Q 027951          117 FDLCRWID--CGGGSCKNTSMFSYSCQCAVDHYN  148 (216)
Q Consensus       117 ~DPC~~~~--CggGtCv~~~~~sY~C~C~~Gy~n  148 (216)
                      +|+|....  |.+ .|++.. ++|+|.|++||.-
T Consensus         2 ~neC~~~nggC~h-~C~n~~-g~~~C~C~~Gy~L   33 (40)
T d3bpse1           2 TNECLDNNGGCSH-VCNDLK-IGYECLCPDGFQL   33 (40)
T ss_dssp             SCGGGTGGGGCSS-EEEECS-SSEEEECCTTCCE
T ss_pred             cccCCCCCCCCcC-EEEcCC-CCEEEECCCCCEE
Confidence            37787644  544 999986 7999999999975

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0014  Score=42.16  Aligned_cols=32  Identities=22%  Similarity=0.266  Sum_probs=24.6

Q ss_pred             CCCCCCcCCCeeec-CCCCceeeecCCCCcCCC
Q 027951          119 LCRWIDCGGGSCKN-TSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       119 PC~~~~CggGtCv~-~~~~sY~C~C~~Gy~nll  150 (216)
                      ++..++|.+|+|.- ....+|+|+|.+||+|.-
T Consensus         8 ~~~~~yC~nG~C~~~~~~~~~~C~C~~gY~G~R   40 (46)
T d1k36a_           8 SDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVR   40 (46)
T ss_dssp             TTCCSSCSSEEEEEETTTTEEEEEECTTCSSTT
T ss_pred             CcCCCcCcCCEEEEeCCCCccEeECCCCceecC
Confidence            34457899898863 344689999999999974

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.001  Score=42.18  Aligned_cols=33  Identities=27%  Similarity=0.532  Sum_probs=27.5

Q ss_pred             cCCCCCCCCcCCCeeecCCCCceeeecCCCCcCC
Q 027951          116 IFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNL  149 (216)
Q Consensus       116 ~~DPC~~~~CggGtCv~~~~~sY~C~C~~Gy~nl  149 (216)
                      ..|||....|.. +|.....++|+|.|++||.=.
T Consensus         3 ~vDPCf~~~CE~-qCqP~~~~~Y~CiCaeGFaP~   35 (43)
T d1dx5i1           3 PVDPCFRANCEY-QCQPLDQTSYLCVCAEGFAPI   35 (43)
T ss_dssp             CCCGGGGCCCSS-EEEECSSSCEEEECCTTEEEE
T ss_pred             ccccccCCCcce-eeeeCCCCcceEEeccccccC
Confidence            359999998874 899877779999999999644

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0011  Score=41.75  Aligned_cols=32  Identities=28%  Similarity=0.759  Sum_probs=25.2

Q ss_pred             CCCccC--CCCCCeeeccCCCCCcceeecCCCCccCc
Q 027951           41 NVCDKV--TCGKGKCKASQNSTFFYECECDLGWKQNT   75 (216)
Q Consensus        41 ~~C~~~--~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~   75 (216)
                      |.|+..  .|.+|+|+.+   +++|+|.|.+||+...
T Consensus         4 nEC~~~~~~c~~~~C~Nt---~Gsy~C~C~~Gy~l~~   37 (43)
T d1uzka2           4 DECQELPGLCQGGKCINT---FGSFQCRCPTGYYLNE   37 (43)
T ss_dssp             CHHHHCGGGGBTSEEEEC---SSCEEEECCTTCCBCT
T ss_pred             ccccCCCCCcCCCEEECC---CCCeEeECCCCCeECc
Confidence            345433  4778999998   8899999999998753

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.0014  Score=42.70  Aligned_cols=34  Identities=18%  Similarity=0.312  Sum_probs=25.1

Q ss_pred             cCCCCCCeeeccCCCCCcceeecCCCCccCccccc
Q 027951           45 KVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVD   79 (216)
Q Consensus        45 ~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~~   79 (216)
                      +..|.||.|.-..+ ...++|+|.+||+|.+|+..
T Consensus        12 ~~yClnGgcc~~~~-~~~~~C~C~~gy~G~RCe~~   45 (49)
T d1moxc_          12 TQFCFHGTCRFLVQ-EDKPACVCHSGYVGARCEHA   45 (49)
T ss_dssp             SCSSTTEEEEEETT-TTEEEEEECTTEESTTSCEE
T ss_pred             CCEeeCCeEEecCC-CCCcEeECCCCCEecCCccc
Confidence            34699986642222 45899999999999998743

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0012  Score=42.90  Aligned_cols=35  Identities=17%  Similarity=0.117  Sum_probs=25.2

Q ss_pred             cCCCCC---CCCcCCC-eeecCCCCceeeecCCCCcCCC
Q 027951          116 IFDLCR---WIDCGGG-SCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       116 ~~DPC~---~~~CggG-tCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      .++||.   .++|.+| .|.-.....|+|+|++||+|.-
T Consensus         3 H~~pC~~~~~~yClnGgcc~~~~~~~~~C~C~~gy~G~R   41 (49)
T d1moxc_           3 HFNDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGAR   41 (49)
T ss_dssp             SEECCCCCSSCSSTTEEEEEETTTTEEEEEECTTEESTT
T ss_pred             ccCccCcccCCEeeCCeEEecCCCCCcEeECCCCCEecC
Confidence            345665   4679855 5544445789999999999974

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.0016  Score=41.01  Aligned_cols=31  Identities=23%  Similarity=0.450  Sum_probs=24.5

Q ss_pred             CCCCCeeeccCCCCCcceeecCCCCccCcccc
Q 027951           47 TCGKGKCKASQNSTFFYECECDLGWKQNTMAV   78 (216)
Q Consensus        47 ~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~~c~~   78 (216)
                      -|.||+|.-..+ ...+.|.|+.||+|.+|+.
T Consensus         9 yCihG~C~~i~~-l~~~~C~C~~gY~G~RCq~   39 (41)
T d1xdtr_           9 FCIHGECKYVKE-LRAPSCICHPGYHGERCHG   39 (41)
T ss_dssp             CCSSEEECCBGG-GTBCCEEECTTEESTTCCE
T ss_pred             EeECcEEeecCc-CCCceeECCCCCeecCccc
Confidence            499999974322 4578999999999999763

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.0039  Score=39.11  Aligned_cols=31  Identities=23%  Similarity=0.499  Sum_probs=22.9

Q ss_pred             CCCCC---CCcCCCeeecCCCCceeeecCCCCcCCC
Q 027951          118 DLCRW---IDCGGGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       118 DPC~~---~~CggGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      |+|..   ..|.+ .|++.. ++|+|.|++||.-.-
T Consensus         1 dEC~~~~~~~C~~-~C~n~~-Gsy~C~C~~Gy~L~~   34 (42)
T d1nzia2           1 NECTDFVDVPCSH-FCNNFI-GGYFCSCPPEYFLHD   34 (42)
T ss_dssp             CTTTC-CCCCSSS-EEEEET-TEEEEECCTTCEECT
T ss_pred             CCCCCCCCcCCCC-EeecCC-CCEEEeCCCCCEECC
Confidence            45642   34654 899976 899999999998543

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.0025  Score=41.51  Aligned_cols=34  Identities=21%  Similarity=0.227  Sum_probs=25.4

Q ss_pred             CCCCC---CCCcC-CCeeecCCCCceeeecCCCCcCCC
Q 027951          117 FDLCR---WIDCG-GGSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       117 ~DPC~---~~~Cg-gGtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      ++||.   .++|. ||+|.......|+|+|++||+|.-
T Consensus         5 ~~pC~~~~~~yC~nGgcc~~~~~~~~~C~C~~gy~G~r   42 (50)
T d1ioxa_           5 FSRCPKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGAR   42 (50)
T ss_dssp             CEECCGGGTTSCTTCCEEEETTTTEEEECCCTTEETTT
T ss_pred             cCccCcccCCCccCCeEEEeCCCCCcEeECCCCCeeCC
Confidence            35564   46798 567755556789999999999974

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.60  E-value=0.002  Score=40.14  Aligned_cols=26  Identities=19%  Similarity=0.593  Sum_probs=21.3

Q ss_pred             CCCC-CCeeeccCCCCCcceeecCCCCccC
Q 027951           46 VTCG-KGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        46 ~~Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      +.|. +.+|+.+   +.+|+|+|++||+|.
T Consensus         7 ~~C~~~A~C~Nt---~Gsy~C~C~~Gy~Gd   33 (40)
T d1gl4a2           7 HQCSVHAECRDY---ATGFCCRCVANYTGN   33 (40)
T ss_dssp             GGSCTTEEEEEC---SSCEEEEECTTEEEC
T ss_pred             CCCCCCCEeecC---CCCeEeECCCCCcCC
Confidence            3455 5699987   679999999999975

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.47  E-value=0.0028  Score=40.04  Aligned_cols=23  Identities=26%  Similarity=0.671  Sum_probs=19.2

Q ss_pred             CCCCeeeccCCCCCcceeecCCCCccC
Q 027951           48 CGKGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        48 Cg~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      |.+ +|+.+   +.+|+|.|.+||+-.
T Consensus        14 C~~-~C~Nt---~gsy~C~C~~Gy~L~   36 (45)
T d1nt0a3          14 CDH-YCHNY---LGGYYCSCRVGYILH   36 (45)
T ss_dssp             CSS-EEEEE---TTEEEEECCTTEEEC
T ss_pred             CCC-EeecC---CCCEEEeCCCCCEEC
Confidence            544 89988   789999999999854

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.0042  Score=38.55  Aligned_cols=30  Identities=27%  Similarity=0.756  Sum_probs=22.8

Q ss_pred             CCCccC-CCCCCeeeccCCCCCcceeecCCCCccC
Q 027951           41 NVCDKV-TCGKGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        41 ~~C~~~-~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      |.|+.. +|.| +|+.+   +++|+|.|.+||+..
T Consensus         2 dEC~~~~~C~~-~C~n~---~Gsy~C~C~~Gy~L~   32 (41)
T d1i0ua2           2 DECQDPDTCSQ-LCVNL---EGGYKCQCEEGFQLD   32 (41)
T ss_dssp             CTTTTTTSCSS-CEECS---SSCCEECCCTTEEEC
T ss_pred             ccCCCCCCCCC-EeECC---CCCEEeECCCCCeEC
Confidence            456543 5654 89887   789999999999854

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.85  E-value=0.0059  Score=38.33  Aligned_cols=21  Identities=24%  Similarity=0.790  Sum_probs=17.7

Q ss_pred             CCeeeccCCCCCcceeecCCCCccCccc
Q 027951           50 KGKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        50 ~GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      ||+|+..       +|+|++||+|..|+
T Consensus        20 hG~C~~G-------~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          20 RGLCFCG-------KCRCHPGFEGSACQ   40 (41)
T ss_dssp             HEEEETT-------EEEECTTCCTTTTC
T ss_pred             CCeEECC-------EEEcCCCCcccCcc
Confidence            8999763       69999999999753

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.73  E-value=0.0089  Score=37.20  Aligned_cols=29  Identities=24%  Similarity=0.553  Sum_probs=22.6

Q ss_pred             CCcc-CCCCCCeeeccCCCCCcceeecCCCCccC
Q 027951           42 VCDK-VTCGKGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        42 ~C~~-~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      .|+. ..|. .+|+.+   +++|+|.|.|||+..
T Consensus         4 EC~~~~~C~-~~C~N~---~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           4 ECENGGFCS-GVCHNL---PGTFECICGPDSALA   33 (40)
T ss_dssp             HHHHCSSCS-SEEEEC---SSSEEEEECSSSSCE
T ss_pred             ccCCCcCcc-CEeeCC---CCCeEeECCCCCeeC
Confidence            4543 3565 499988   789999999999975

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.61  E-value=0.0097  Score=37.20  Aligned_cols=30  Identities=27%  Similarity=0.539  Sum_probs=23.4

Q ss_pred             CCCcc---CCCCCCeeeccCCCCCcceeecCCCCccC
Q 027951           41 NVCDK---VTCGKGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        41 ~~C~~---~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      |.|++   ..|.| +|+.+   +.+|+|.|.+||+-.
T Consensus         1 dEC~~~~~~~C~~-~C~n~---~Gsy~C~C~~Gy~L~   33 (42)
T d1nzia2           1 NECTDFVDVPCSH-FCNNF---IGGYFCSCPPEYFLH   33 (42)
T ss_dssp             CTTTC-CCCCSSS-EEEEE---TTEEEEECCTTCEEC
T ss_pred             CCCCCCCCcCCCC-EeecC---CCCEEEeCCCCCEEC
Confidence            35653   35776 89988   789999999999864

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.23  E-value=0.014  Score=36.08  Aligned_cols=29  Identities=31%  Similarity=0.692  Sum_probs=22.9

Q ss_pred             CCCccC--CCCCCeeeccCCCCCcceeecCCCCcc
Q 027951           41 NVCDKV--TCGKGKCKASQNSTFFYECECDLGWKQ   73 (216)
Q Consensus        41 ~~C~~~--~Cg~GtC~~~~~~~~~Y~C~C~pGwtg   73 (216)
                      |.|...  .|.| +|+++   +.+|+|.|.+||+-
T Consensus         3 neC~~~nggC~h-~C~n~---~g~~~C~C~~Gy~L   33 (40)
T d3bpse1           3 NECLDNNGGCSH-VCNDL---KIGYECLCPDGFQL   33 (40)
T ss_dssp             CGGGTGGGGCSS-EEEEC---SSSEEEECCTTCCE
T ss_pred             ccCCCCCCCCcC-EEEcC---CCCEEEECCCCCEE
Confidence            566554  3665 99987   77999999999986

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.014  Score=36.59  Aligned_cols=23  Identities=17%  Similarity=0.466  Sum_probs=19.2

Q ss_pred             CCeeeccCCCCCcceeecCCCCccCc
Q 027951           50 KGKCKASQNSTFFYECECDLGWKQNT   75 (216)
Q Consensus        50 ~GtC~~~~~~~~~Y~C~C~pGwtg~~   75 (216)
                      ..+|+.+   +++|+|.|.+||+...
T Consensus        15 ~~~C~Nt---~Gsy~C~C~~Gy~l~~   37 (45)
T d1szba2          15 DHHCHNH---LGGFYCSCRAGYVLHR   37 (45)
T ss_dssp             SSEEEEE---TTEEEEECCTTEEECT
T ss_pred             CCCCccC---CCCeEEECCCCCeECC
Confidence            3489988   7899999999998643

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.75  E-value=0.027  Score=35.58  Aligned_cols=23  Identities=35%  Similarity=0.896  Sum_probs=19.2

Q ss_pred             CC-CCeeeccCCCCCcceeec-CCCCccCccc
Q 027951           48 CG-KGKCKASQNSTFFYECEC-DLGWKQNTMA   77 (216)
Q Consensus        48 Cg-~GtC~~~~~~~~~Y~C~C-~pGwtg~~c~   77 (216)
                      |. ||+|+-.       +|+| ++||+|..|+
T Consensus        13 Cng~G~C~cG-------~C~C~~~gy~G~~Ce   37 (43)
T d1jv2b5          13 CSGRGKCECG-------SCVCIQPGSYGDTCE   37 (43)
T ss_dssp             GGGTEEEETT-------EEEECCSSCBSTTSC
T ss_pred             ECCCCEEECC-------EeEeCCCCccCCccc
Confidence            65 8999875       6999 5899999976

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.14  E-value=0.033  Score=35.74  Aligned_cols=21  Identities=24%  Similarity=0.501  Sum_probs=18.3

Q ss_pred             CeeeccCCCCCcceeecCCCCccC
Q 027951           51 GKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        51 GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      .+|+.+   +++|+|.|.+||+..
T Consensus        24 ~~C~Nt---~GsY~C~C~~Gy~l~   44 (53)
T d1apqa_          24 HLCHNY---VGGYFCSCRPGYELQ   44 (53)
T ss_dssp             SEEEEE---TTEEEEECSTTCEEC
T ss_pred             CEeEcC---CCCeEeECCCCCeEC
Confidence            389998   889999999999854

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.71  E-value=0.02  Score=35.77  Aligned_cols=28  Identities=25%  Similarity=0.323  Sum_probs=22.1

Q ss_pred             CCcCCCeeecC-CCCceeeecCCCCcCCC
Q 027951          123 IDCGGGSCKNT-SMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       123 ~~CggGtCv~~-~~~sY~C~C~~Gy~nll  150 (216)
                      .+|-+|+|.-- +...++|+|.+||.|.-
T Consensus         8 ~yCihG~C~~i~~l~~~~C~C~~gY~G~R   36 (41)
T d1xdtr_           8 DFCIHGECKYVKELRAPSCICHPGYHGER   36 (41)
T ss_dssp             TCCSSEEECCBGGGTBCCEEECTTEESTT
T ss_pred             CEeECcEEeecCcCCCceeECCCCCeecC
Confidence            56989999642 24579999999999963

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.00  E-value=0.057  Score=33.30  Aligned_cols=31  Identities=16%  Similarity=0.405  Sum_probs=24.3

Q ss_pred             CCCC-CeeeccCCCCCcceeecCCCCccCccc
Q 027951           47 TCGK-GKCKASQNSTFFYECECDLGWKQNTMA   77 (216)
Q Consensus        47 ~Cg~-GtC~~~~~~~~~Y~C~C~pGwtg~~c~   77 (216)
                      .|.+ |+|+...-...--+|.|+.||+|.+|+
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCE   34 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   34 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCceeEE
Confidence            3776 599986444446799999999999986

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.95  E-value=0.025  Score=33.39  Aligned_cols=22  Identities=32%  Similarity=1.026  Sum_probs=17.4

Q ss_pred             CC-CCeeeccCCCCCcceeecCCCCccCcc
Q 027951           48 CG-KGKCKASQNSTFFYECECDLGWKQNTM   76 (216)
Q Consensus        48 Cg-~GtC~~~~~~~~~Y~C~C~pGwtg~~c   76 (216)
                      |+ ||.|.=.       +|.|++||+|..|
T Consensus         5 C~ghG~C~CG-------~C~C~~gw~G~~C   27 (31)
T d1jv2b4           5 CSGHGQCSCG-------DCLCDSDWTGYYC   27 (31)
T ss_dssp             SCCCTTCCST-------TTCCCTTEESSSS
T ss_pred             ccCCCcccCC-------ceEccCCcccccc
Confidence            44 7888553       5999999999986

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.48  E-value=0.065  Score=34.30  Aligned_cols=23  Identities=17%  Similarity=0.086  Sum_probs=18.9

Q ss_pred             CeeecCCCCceeeecCCCCcCCCC
Q 027951          128 GSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       128 GtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      -.|+++. ++|+|.|.+||+-.-|
T Consensus        11 ~~C~~~~-g~~~C~C~~Gy~L~~D   33 (50)
T d1autl2          11 HYCLEEV-GWRRCSCAPGYKLGDD   33 (50)
T ss_dssp             SEEEECS-SSEEEECCTTEEECTT
T ss_pred             cEeecCC-CCeEEECCCCCEECCC
Confidence            4799876 7899999999986543

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.55  E-value=0.11  Score=31.86  Aligned_cols=26  Identities=31%  Similarity=0.669  Sum_probs=21.2

Q ss_pred             cC-CCeeecCCCCc--eeeecCCCCcCCC
Q 027951          125 CG-GGSCKNTSMFS--YSCQCAVDHYNLL  150 (216)
Q Consensus       125 Cg-gGtCv~~~~~s--Y~C~C~~Gy~nll  150 (216)
                      |. ||+|+.-.-+|  .+|.|+.||.|..
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~f~G~H   32 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQH   32 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEESTT
T ss_pred             cccCCEEEEEehhcCCEEecCCcccCcee
Confidence            65 88999865444  8999999999986

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.24  E-value=0.12  Score=33.04  Aligned_cols=22  Identities=23%  Similarity=0.552  Sum_probs=17.9

Q ss_pred             CeeeccCCCCCcceeecCCCCccCc
Q 027951           51 GKCKASQNSTFFYECECDLGWKQNT   75 (216)
Q Consensus        51 GtC~~~~~~~~~Y~C~C~pGwtg~~   75 (216)
                      -.|+++   +.+|+|.|.+||+-..
T Consensus        11 ~~C~~~---~g~~~C~C~~Gy~L~~   32 (50)
T d1autl2          11 HYCLEE---VGWRRCSCAPGYKLGD   32 (50)
T ss_dssp             SEEEEC---SSSEEEECCTTEEECT
T ss_pred             cEeecC---CCCeEEECCCCCEECC
Confidence            378877   6789999999998653

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.99  E-value=0.14  Score=32.79  Aligned_cols=23  Identities=26%  Similarity=0.313  Sum_probs=18.6

Q ss_pred             CeeecCCCCceeeecCCCCcCCCC
Q 027951          128 GSCKNTSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       128 GtCv~~~~~sY~C~C~~Gy~nlln  151 (216)
                      ..|++.. ++|+|.|++||.-.-|
T Consensus        12 h~C~n~~-g~~~C~C~~Gy~L~~D   34 (51)
T d2p3ua1          12 QFCHEEQ-NSVVCSCARGYTLADN   34 (51)
T ss_dssp             SEEEEET-TEEEEECCTTEEECTT
T ss_pred             cEeecCC-CCeEeEcCCCCEECCC
Confidence            3799876 7999999999985543

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.34  E-value=0.16  Score=32.52  Aligned_cols=23  Identities=22%  Similarity=0.621  Sum_probs=18.5

Q ss_pred             CCCCeeeccCCCCCcceeecCCCCccC
Q 027951           48 CGKGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        48 Cg~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      |.| .|+++   +.+|+|.|.+||+-.
T Consensus        10 C~h-~C~n~---~g~~~C~C~~Gy~L~   32 (51)
T d2p3ua1          10 CDQ-FCHEE---QNSVVCSCARGYTLA   32 (51)
T ss_dssp             CSS-EEEEE---TTEEEEECCTTEEEC
T ss_pred             ccc-EeecC---CCCeEeEcCCCCEEC
Confidence            544 78887   679999999999854

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.50  E-value=0.21  Score=31.87  Aligned_cols=21  Identities=19%  Similarity=0.273  Sum_probs=16.8

Q ss_pred             eeecCCCCceeeecCCCCcCCC
Q 027951          129 SCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       129 tCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      .|++.. ++|+|.|++||.-.-
T Consensus        11 ~C~~~~-~~~~C~C~~Gy~L~~   31 (51)
T d1kigl_          11 FCREER-SEVRCSCAHGYVLGD   31 (51)
T ss_dssp             CCCEET-TEECCCCCTTEEECT
T ss_pred             EeEcCC-CcEEeEcCCCCEECC
Confidence            588765 799999999996443

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.16  E-value=0.29  Score=31.96  Aligned_cols=23  Identities=22%  Similarity=0.294  Sum_probs=18.5

Q ss_pred             CeeecCCCCceeeecCCCCcCCC
Q 027951          128 GSCKNTSMFSYSCQCAVDHYNLL  150 (216)
Q Consensus       128 GtCv~~~~~sY~C~C~~Gy~nll  150 (216)
                      -.|++...++|+|.|++||.-.-
T Consensus        12 h~C~~~~~~~~~C~C~~Gy~L~~   34 (57)
T d1rfnb_          12 QFCKNSADNKVVCSCTEGYRLAE   34 (57)
T ss_dssp             SEEEECTTSCEEEECCTTEEECT
T ss_pred             cEeeeCCCCCeEeECCCCCEECC
Confidence            37988765689999999998543

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.18  E-value=0.35  Score=30.23  Aligned_cols=29  Identities=31%  Similarity=0.669  Sum_probs=21.5

Q ss_pred             CCCCC---CCcC-CCeeecCCCCceeeecC-CCCcCCCC
Q 027951          118 DLCRW---IDCG-GGSCKNTSMFSYSCQCA-VDHYNLLN  151 (216)
Q Consensus       118 DPC~~---~~Cg-gGtCv~~~~~sY~C~C~-~Gy~nlln  151 (216)
                      |.|..   ..|. +|+|+-+     +|+|. +||+|.+-
T Consensus         3 d~C~~~~g~iCng~G~C~cG-----~C~C~~~gy~G~~C   36 (43)
T d1jv2b5           3 DTCMSSNGLLCSGRGKCECG-----SCVCIQPGSYGDTC   36 (43)
T ss_dssp             STTCCSSCSGGGGTEEEETT-----EEEECCSSCBSTTS
T ss_pred             cccCCCCCCEECCCCEEECC-----EeEeCCCCccCCcc
Confidence            45654   3486 9999974     79995 79999874

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.96  E-value=0.31  Score=30.41  Aligned_cols=31  Identities=23%  Similarity=0.621  Sum_probs=23.3

Q ss_pred             CCCccCCCCCCeeeccCCCCCcceeecCCCCccC
Q 027951           41 NVCDKVTCGKGKCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        41 ~~C~~~~Cg~GtC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      |+|-..+|.. .|.+.+  ..+|+|.|.+||.-.
T Consensus         5 DPCf~~~CE~-qCqP~~--~~~Y~CiCaeGFaP~   35 (43)
T d1dx5i1           5 DPCFRANCEY-QCQPLD--QTSYLCVCAEGFAPI   35 (43)
T ss_dssp             CGGGGCCCSS-EEEECS--SSCEEEECCTTEEEE
T ss_pred             ccccCCCcce-eeeeCC--CCcceEEeccccccC
Confidence            4566666654 788875  668999999999754

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.24  E-value=0.17  Score=32.23  Aligned_cols=20  Identities=20%  Similarity=0.539  Sum_probs=16.1

Q ss_pred             eeeccCCCCCcceeecCCCCccC
Q 027951           52 KCKASQNSTFFYECECDLGWKQN   74 (216)
Q Consensus        52 tC~~~~~~~~~Y~C~C~pGwtg~   74 (216)
                      .|+++   +.+|+|.|.+||+-.
T Consensus        11 ~C~~~---~~~~~C~C~~Gy~L~   30 (51)
T d1kigl_          11 FCREE---RSEVRCSCAHGYVLG   30 (51)
T ss_dssp             CCCEE---TTEECCCCCTTEEEC
T ss_pred             EeEcC---CCcEEeEcCCCCEEC
Confidence            47766   668999999999754

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.72  E-value=0.62  Score=29.49  Aligned_cols=23  Identities=13%  Similarity=0.329  Sum_probs=16.8

Q ss_pred             eeec-----CCCCceeeecCCCCcCCCC
Q 027951          129 SCKN-----TSMFSYSCQCAVDHYNLLN  151 (216)
Q Consensus       129 tCv~-----~~~~sY~C~C~~Gy~nlln  151 (216)
                      .|+.     +..++|+|.|++||+-.-|
T Consensus        17 ~Cl~~p~~~n~~~~y~C~C~~G~~L~~D   44 (50)
T d1ijqa2          17 LCLPAPQINPHSPKFTCACPDGMLLARD   44 (50)
T ss_dssp             EEEECCCCSTTCCSEEEECCTTCEECTT
T ss_pred             ccCCCcCcccCCCCEEEeCCCCCEECCC
Confidence            6863     2346899999999985543