Citrus Sinensis ID: 028024

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-----
Protein Sequence
MSILPYNSLMQLKIPSHSCAKTTRKSFSICARLDNSQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQIENIGLSDLKDSLYFPQSAGK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHccccHHHHHHHHHcEEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEcccccHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEEEEcccccccHHHHHHHHHHHccccEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccEEEEEEEccccccHccccEEEEEEEcccccccHHHcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEEEEccEEEEEEEccccccccHHHHHHHHHHHcccccEEcHHHcccccccccc
Coil and Loop (DISEMBL)
msilpynslmqlkipshscakttrKSFSICARLDNSQQEEQQLNLSVLRftfgipgfdesylprwigygFGSLIVLNHfafsnsvtsAQLRSEVLGLSLAAFSVTLPYlgkflkgaspvsqkslpesgEQIFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELcvrgywqtpdgaskTQLLEWFERQIENIglsdlkdslyfpqsagk
Flexible Loop (DISEMBL)
msilpynslmqlkipshscaKTTRKSFSICARLDNSQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQIENiglsdlkdslyfpqsagk
Low Complexity Region (SEG)
MSILPYNSLMQLKIPSHSCAKTTRKSFSICARLDNSQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQIENIGLSDLKDSLYFPQSAGK
Disordered region (IsUnstruct)
**************************FSICAR*********QLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKG***************IFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQIENIGLSDLKDSLY*******
Disordered Region (DISOPRED)
***LPYNSLMQLK*********************************VLRFTFGIPGFDESYLPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFL*****************IFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQIENIGLSDLKDSLYFPQS***
Disordered Region (DISEMBL)
MSILPYNSLMQLKIPSHSCAKTTRKSFSICARLDNSQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQIENIGLSDLKDSLYFPQSAGK
Disordered Region (DISPRO)
**ILPYNSLMQLKIPSHS******KSFSICARLDNSQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQIENIGLSDLKDSLYFPQS***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSILPYNSLMQLKIPSHSCAKTTRKSFSICARLDNSQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQIENIGLSDLKDSLYFPQSAGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	215
255539547	308	conserved hypothetical protein [Ricinus	0.981	0.685	0.674	6e-78
297741104	313	unnamed protein product [Vitis vinifera]	0.888	0.610	0.727	2e-77
225455453	311	PREDICTED: uncharacterized protein LOC10	0.888	0.614	0.727	2e-77
224136914	265	predicted protein [Populus trichocarpa]	0.897	0.728	0.734	7e-76
15242277	275	uncharacterized protein [Arabidopsis tha	0.925	0.723	0.647	6e-73
297796017	272	hypothetical protein ARALYDRAFT_495283 [	0.925	0.731	0.651	2e-72
449446061	288	PREDICTED: uncharacterized protein LOC10	0.893	0.666	0.668	2e-69
356559871	287	PREDICTED: uncharacterized protein LOC10	0.795	0.595	0.693	2e-64
388515973	222	unknown [Lotus japonicus]	0.883	0.855	0.607	2e-63
242040471	293	hypothetical protein SORBIDRAFT_01g03118	0.976	0.716	0.553	3e-61

>gi|255539547|ref|XP_002510838.1| conserved hypothetical protein [Ricinus communis] gi|223549953|gb|EEF51440.1| conserved hypothetical protein [Ricinus communis]

 Score =  295 bits (756), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 147/218 (67%), Positives = 178/218 (81%), Gaps = 7/218 (3%)

Query: 1   MSILPYNSLM-QLKIPSHSCAKTTRKSFSICARLDNSQQ---EEQQLNLSVLRFTFGIPG 56
           MS L  N L+   K  +++  K+  K+ SI  R+DNSQ+   ++Q LNLSVLRFTFGIPG
Sbjct: 1   MSNLSINPLITHPKFRANNSVKS--KNASIIVRIDNSQRKKDQQQDLNLSVLRFTFGIPG 58

Query: 57  FDESYLPRWIGYGFGSLIVLNHFAFSNSVTS-AQLRSEVLGLSLAAFSVTLPYLGKFLKG 115
            DESYLPRWIGYGFGSL+VLNHF  SNSVTS  Q+R+E LGLSLAAFS+ LPY G+FLKG
Sbjct: 59  LDESYLPRWIGYGFGSLLVLNHFLGSNSVTSLPQMRTEALGLSLAAFSIALPYFGRFLKG 118

Query: 116 ASPVSQKSLPESGEQIFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGY 175
           A+PV Q +LP+  EQIFVMS+N+SD LKE+LAWATYVLLRNTNSI+VLI I+GELCVRGY
Sbjct: 119 ATPVDQTALPQGSEQIFVMSENVSDTLKEDLAWATYVLLRNTNSIAVLIYIQGELCVRGY 178

Query: 176 WQTPDGASKTQLLEWFERQIENIGLSDLKDSLYFPQSA 213
           W TPD  SK Q+++WF+ +IE+IGL DLKD+LYFPQ+A
Sbjct: 179 WNTPDNISKAQVIDWFKGRIEDIGLFDLKDTLYFPQTA 216

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741104|emb|CBI31835.3| unnamed protein product [Vitis vinifera]

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 144/198 (72%), Positives = 164/198 (82%), Gaps = 7/198 (3%)

Query: 18  SCAKTTRKSFSICARLDNSQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLN 77
           S   TTRK  SI A       ++QQLNLSVLRFT GIPGFDESYLPRWIGYGFGS I+LN
Sbjct: 54  STINTTRKFQSISA-----SNQQQQLNLSVLRFTLGIPGFDESYLPRWIGYGFGSFILLN 108

Query: 78  HFAFS--NSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMS 135
           HF  S  N++T+AQLR+E LGL LAAFSV LPYLGKFLKGA+PV Q +LPE  EQIFVM+
Sbjct: 109 HFVGSDLNTITAAQLRTEALGLCLAAFSVVLPYLGKFLKGAAPVDQTTLPEGIEQIFVMT 168

Query: 136 QNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQI 195
           QNISD LKE+LAWATY+LLRNTN+I+VLISIRG LCVRGYW TPD  SK ++L+W E++I
Sbjct: 169 QNISDILKEDLAWATYILLRNTNTIAVLISIRGALCVRGYWNTPDDVSKARVLDWVEKEI 228

Query: 196 ENIGLSDLKDSLYFPQSA 213
           E IGLSDLKD+LYFPQSA
Sbjct: 229 EKIGLSDLKDTLYFPQSA 246

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455453|ref|XP_002274647.1| PREDICTED: uncharacterized protein LOC100252183 [Vitis vinifera]

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 144/198 (72%), Positives = 164/198 (82%), Gaps = 7/198 (3%)

Query: 18  SCAKTTRKSFSICARLDNSQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLN 77
           S   TTRK  SI A       ++QQLNLSVLRFT GIPGFDESYLPRWIGYGFGS I+LN
Sbjct: 54  STINTTRKFQSISA-----SNQQQQLNLSVLRFTLGIPGFDESYLPRWIGYGFGSFILLN 108

Query: 78  HFAFS--NSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMS 135
           HF  S  N++T+AQLR+E LGL LAAFSV LPYLGKFLKGA+PV Q +LPE  EQIFVM+
Sbjct: 109 HFVGSDLNTITAAQLRTEALGLCLAAFSVVLPYLGKFLKGAAPVDQTTLPEGIEQIFVMT 168

Query: 136 QNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQI 195
           QNISD LKE+LAWATY+LLRNTN+I+VLISIRG LCVRGYW TPD  SK ++L+W E++I
Sbjct: 169 QNISDILKEDLAWATYILLRNTNTIAVLISIRGALCVRGYWNTPDDVSKARVLDWVEKEI 228

Query: 196 ENIGLSDLKDSLYFPQSA 213
           E IGLSDLKD+LYFPQSA
Sbjct: 229 EKIGLSDLKDTLYFPQSA 246

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136914|ref|XP_002322447.1| predicted protein [Populus trichocarpa] gi|222869443|gb|EEF06574.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (738), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 144/196 (73%), Positives = 168/196 (85%), Gaps = 3/196 (1%)

Query: 20  AKTTRKSFSICARLDN--SQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLN 77
           AK TRKS +I A  DN  SQ+++QQLNLSVLRFTFGIPG DESYLPRWIGYGFGSL++LN
Sbjct: 4   AKKTRKSIAIHASSDNPQSQRQQQQLNLSVLRFTFGIPGLDESYLPRWIGYGFGSLLILN 63

Query: 78  HFAFSN-SVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMSQ 136
           HF  SN   T AQLR+EVLGLSLAAFS  LPY G+FLKGA+PV Q +LP+  EQIF MSQ
Sbjct: 64  HFLGSNPDTTQAQLRTEVLGLSLAAFSAALPYFGRFLKGATPVDQGTLPQDAEQIFAMSQ 123

Query: 137 NISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQIE 196
           NISDA KE+LAWATY+LLRNTN+I+VLISI+GELCVRGYW+T D  SK ++L+WF+ QIE
Sbjct: 124 NISDAQKEDLAWATYILLRNTNTIAVLISIQGELCVRGYWKTSDKMSKDEVLDWFKEQIE 183

Query: 197 NIGLSDLKDSLYFPQS 212
           NIGLSD+KD+LYFPQ+
Sbjct: 184 NIGLSDVKDTLYFPQT 199

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242277|ref|NP_200024.1| uncharacterized protein [Arabidopsis thaliana] gi|79330641|ref|NP_001032060.1| uncharacterized protein [Arabidopsis thaliana] gi|10177746|dbj|BAB11059.1| unnamed protein product [Arabidopsis thaliana] gi|117959001|gb|ABK59697.1| At5g52110 [Arabidopsis thaliana] gi|332008789|gb|AED96172.1| uncharacterized protein [Arabidopsis thaliana] gi|332008790|gb|AED96173.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  279 bits (713), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 132/204 (64%), Positives = 167/204 (81%), Gaps = 5/204 (2%)

Query: 15  PSHSCAKTTRKSFSICARLDN----SQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGF 70
           P  +     ++S  I AR +N    S+  +QQLNLSVLRFTFGIPGFDESYLPRWIGYGF
Sbjct: 12  PKFALQPRAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGF 71

Query: 71  GSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQ 130
           GSL++LNHF+ S  ++ +Q+RSE LGLSLAAFS+ LPY+GKFLKG S V Q+SLPE GEQ
Sbjct: 72  GSLLLLNHFSASAPISESQMRSEALGLSLAAFSIALPYIGKFLKG-SVVEQRSLPEEGEQ 130

Query: 131 IFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEW 190
           +FV+S NI D+LKE+LAWATYVLLRNT++I+VLIS++GELCVRGYW  PD  SK QL +W
Sbjct: 131 VFVISSNIGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQLHDW 190

Query: 191 FERQIENIGLSDLKDSLYFPQSAG 214
           F+++++ IGL+D+K++LYFPQ AG
Sbjct: 191 FKKKVDEIGLADVKETLYFPQYAG 214

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796017|ref|XP_002865893.1| hypothetical protein ARALYDRAFT_495283 [Arabidopsis lyrata subsp. lyrata] gi|297311728|gb|EFH42152.1| hypothetical protein ARALYDRAFT_495283 [Arabidopsis lyrata subsp. lyrata]

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 131/201 (65%), Positives = 166/201 (82%), Gaps = 2/201 (0%)

Query: 15  PSHSCAKTTRKSFSICARLDN-SQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSL 73
           P  +     ++S  I AR +N S Q++QQLNLSVLRFTFGIPG DESYLPRWIGYGFGSL
Sbjct: 12  PKFALQPRAQRSTRIFARTENDSPQQQQQLNLSVLRFTFGIPGLDESYLPRWIGYGFGSL 71

Query: 74  IVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFV 133
           ++LNHF+ S  ++ +Q+RSE LGLSLA+FS+ LPY+GKFLKG S V Q++LPE GEQIFV
Sbjct: 72  LLLNHFSASAPISESQMRSEALGLSLASFSIALPYIGKFLKG-SVVEQRTLPEEGEQIFV 130

Query: 134 MSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFER 193
           +S NI D+LKE+LAWATYVLLRNT++I+VLI ++GELCVRGYW  PD  SK QL +WF++
Sbjct: 131 ISSNIGDSLKEDLAWATYVLLRNTSTIAVLILVQGELCVRGYWNCPDQMSKAQLHDWFKK 190

Query: 194 QIENIGLSDLKDSLYFPQSAG 214
           +++ IGL+D+KD+LYFPQ AG
Sbjct: 191 KVDEIGLADVKDTLYFPQYAG 211

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446061|ref|XP_004140790.1| PREDICTED: uncharacterized protein LOC101219803 [Cucumis sativus] gi|449530412|ref|XP_004172189.1| PREDICTED: uncharacterized LOC101219803 [Cucumis sativus]

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/196 (66%), Positives = 155/196 (79%), Gaps = 4/196 (2%)

Query: 20  AKTTRKSFSICARLDNSQQE-EQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLNH 78
           AK+  K  +I ARLD+S+    QQLNLSVLRFT GIPG DESYLPRWIGYGFGSL++LNH
Sbjct: 22  AKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNH 81

Query: 79  FAFSNSV---TSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMS 135
           F  SNS    T AQLR+E LG+SLAAFS+ LPYLGKFLKGA P  +  LPE  EQIF++S
Sbjct: 82  FVGSNSAALTTPAQLRTEALGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLS 141

Query: 136 QNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQI 195
           Q +SD LKE++AWATY+LLRNTNSISVLI  +G LCVRGYW +P+  S   LL WFE Q+
Sbjct: 142 QILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQL 201

Query: 196 ENIGLSDLKDSLYFPQ 211
           ++IGLS LKD++YFPQ
Sbjct: 202 QSIGLSALKDAVYFPQ 217

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559871|ref|XP_003548220.1| PREDICTED: uncharacterized protein LOC100817953 [Glycine max]

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 120/173 (69%), Positives = 142/173 (82%), Gaps = 2/173 (1%)

Query: 43  LNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLNHFAFSNS--VTSAQLRSEVLGLSLA 100
           LNLSVLRFT GIPG DESYLPRWIGYGFGSL++LNHF  S+S  VT AQL +EVLGLSLA
Sbjct: 48  LNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGLSLA 107

Query: 101 AFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMSQNISDALKENLAWATYVLLRNTNSI 160
           +FS+ LPYLGKFLKGA PV +K++P+  EQIFVMS +  D LKE+LAWA+YVLL NTN+I
Sbjct: 108 SFSIVLPYLGKFLKGAQPVDEKTIPDGTEQIFVMSTDRVDGLKEDLAWASYVLLCNTNAI 167

Query: 161 SVLISIRGELCVRGYWQTPDGASKTQLLEWFERQIENIGLSDLKDSLYFPQSA 213
           ++LI I+GE+C RGYW  PD  SK  L  WF+++IEN GL DLKD+LYFPQ A
Sbjct: 168 AMLIFIQGEICARGYWNIPDDTSKEILPGWFKKKIENAGLYDLKDTLYFPQDA 220

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515973|gb|AFK46048.1| unknown [Lotus japonicus]

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 119/196 (60%), Positives = 155/196 (79%), Gaps = 6/196 (3%)

Query: 22  TTRKSFSICARLDNSQ----QEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLIVLN 77
           +T+ + ++ A L + Q     ++QQLNLSVLRFT GIPGFDESYLPRWIGYGFGSL++LN
Sbjct: 24  STKFTTTVRASLQDPQPPNTSQQQQLNLSVLRFTLGIPGFDESYLPRWIGYGFGSLLLLN 83

Query: 78  HFAFSNS--VTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMS 135
           HF  S+S  VT AQL +EVLG+SLA+FS+ LPYLGKFLKGA PV + +LP+  +QIFVMS
Sbjct: 84  HFLGSDSATVTPAQLSTEVLGMSLASFSIVLPYLGKFLKGAQPVDRTTLPDGTQQIFVMS 143

Query: 136 QNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEWFERQI 195
            +I D LKE+LAWA+Y+LLRN+N+I+ LI I+G++C RGYW   D +S   LL +F++++
Sbjct: 144 TDIVDGLKEDLAWASYILLRNSNAIAALIFIQGDICARGYWNITDDSSTEILLGFFKKKV 203

Query: 196 ENIGLSDLKDSLYFPQ 211
           EN  L DLKD+LYFPQ
Sbjct: 204 ENARLYDLKDTLYFPQ 219

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242040471|ref|XP_002467630.1| hypothetical protein SORBIDRAFT_01g031180 [Sorghum bicolor] gi|241921484|gb|EER94628.1| hypothetical protein SORBIDRAFT_01g031180 [Sorghum bicolor]

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 119/215 (55%), Positives = 153/215 (71%), Gaps = 5/215 (2%)

Query: 3   ILPYNSLMQLKIPSHSCAKTTRKSFSICA--RLDNSQ--QEEQQLNLSVLRFTFGIPGFD 58
           +LP  +    +  +   AK  R++ S  +  R  NS   Q++QQ+NLSVLRFT GIPG D
Sbjct: 16  LLPTATARLRQCSAAPAAKPRRRTLSSSSLVRASNSDPSQQQQQVNLSVLRFTLGIPGLD 75

Query: 59  ESYLPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASP 118
           ESYLPRWIG GFG+L+VLNH   S S T AQLRSE LGL LAAFS TLP+LG+FL+GA  
Sbjct: 76  ESYLPRWIGLGFGALVVLNHL-ISPSPTPAQLRSEALGLCLAAFSATLPFLGRFLEGADA 134

Query: 119 VSQKSLPESGEQIFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQT 178
            S+  LPE   Q+FVMS+N+S   KE++AWA+YVLLRNTN+ SV+I+I    C+RGYW  
Sbjct: 135 ASRVPLPEGSSQVFVMSENLSAVQKEDMAWASYVLLRNTNTTSVVIAIGDLFCIRGYWNP 194

Query: 179 PDGASKTQLLEWFERQIENIGLSDLKDSLYFPQSA 213
           P   SK  ++EWF+ Q++ +GL DLKD+LYFP S+
Sbjct: 195 PANTSKYAMIEWFKSQMQQLGLVDLKDALYFPNSS 229

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	215
TAIR|locus:2173048	275	HCF208 "AT5G52110" [Arabidopsi	0.925	0.723	0.647	6.3e-69

TAIR|locus:2173048 HCF208 "AT5G52110" [Arabidopsis thaliana (taxid:3702)]

 Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
 Identities = 132/204 (64%), Positives = 167/204 (81%)

Query:    15 PSHSCAKTTRKSFSICARLDN----SQQEEQQLNLSVLRFTFGIPGFDESYLPRWIGYGF 70
             P  +     ++S  I AR +N    S+  +QQLNLSVLRFTFGIPGFDESYLPRWIGYGF
Sbjct:    12 PKFALQPRAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGF 71

Query:    71 GSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQ 130
             GSL++LNHF+ S  ++ +Q+RSE LGLSLAAFS+ LPY+GKFLKG S V Q+SLPE GEQ
Sbjct:    72 GSLLLLNHFSASAPISESQMRSEALGLSLAAFSIALPYIGKFLKG-SVVEQRSLPEEGEQ 130

Query:   131 IFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVRGYWQTPDGASKTQLLEW 190
             +FV+S NI D+LKE+LAWATYVLLRNT++I+VLIS++GELCVRGYW  PD  SK QL +W
Sbjct:   131 VFVISSNIGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQLHDW 190

Query:   191 FERQIENIGLSDLKDSLYFPQSAG 214
             F+++++ IGL+D+K++LYFPQ AG
Sbjct:   191 FKKKVDEIGLADVKETLYFPQYAG 214


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      215       215   0.00087  112 3  11 22  0.37    33
                                                     32  0.50    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  169 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.67u 0.10s 18.77t   Elapsed:  00:00:01
  Total cpu time:  18.67u 0.10s 18.77t   Elapsed:  00:00:01
  Start:  Thu May  9 23:05:51 2013   End:  Thu May  9 23:05:52 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0010190 "cytochrome b6f complex assembly" evidence=IMP

GO:0010207 "photosystem II assembly" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	215
pfam11152	195	pfam11152, DUF2930, Protein of unknown function (D	3e-42

>gnl|CDD|221004 pfam11152, DUF2930, Protein of unknown function (DUF2930)

 Score =  141 bits (357), Expect = 3e-42
 Identities = 52/151 (34%), Positives = 79/151 (52%), Gaps = 8/151 (5%)

Query: 62  LPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQ 121
           LP   G   G L++LN    +  +T +Q R++VLGL LAA  + +  L    +  SP   
Sbjct: 1   LPLIAGLLGGLLLLLNRL-STADITPSQSRADVLGLLLAAGLILVGLLWTRAQPRSP-EA 58

Query: 122 KSLPESGEQIFVMSQNISDALKENLAWATYVLLRNTNSISVLISIRGELCVR-GYWQTPD 180
             L   GEQ F +S ++S+ALKE LAWA+++LL  T + SVL+   G++ +R G    P 
Sbjct: 59  VDLE--GEQGFELSPDLSEALKEELAWASHLLLTATPAASVLVYWDGQVLLRRGILGPPV 116

Query: 181 GASKTQLLEWFERQIENIGLSDLKDSLYFPQ 211
              K +  E  +R +E   L  L +   +P 
Sbjct: 117 ---KFEPGEICKRALETQQLVYLVNLKLYPG 144

This family of proteins has no known function. Length = 195

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	215
PF11152	195	DUF2930: Protein of unknown function (DUF2930); In	100.0

>PF11152 DUF2930: Protein of unknown function (DUF2930); InterPro: IPR021325 This family of proteins has no known function

Probab=100.00  E-value=2.1e-50  Score=345.74  Aligned_cols=149  Identities=36%  Similarity=0.470  Sum_probs=142.4

Q ss_pred             hhHHHHHHHHHHHHhhhhccCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCCCCCCCCeeceEeccCccHH
Q 028024           62 LPRWIGYGFGSLIVLNHFAFSNSVTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIFVMSQNISDA  141 (215)
Q Consensus        62 LPl~vG~l~~~llL~Nr~~s~a~~t~sQ~RadvLg~~Lsa~lv~LiL~Gllw~~~qP~~~~~v~l~Geq~F~l~~~Lsd~  141 (215)
                      ||+++|+++++++++||++++ ++||||+||||||++||+++   ||+|++|+++||++++.|++.|+|+|+|+++|||+
T Consensus         1 LPl~vG~l~~~lll~N~~~~~-~~t~sq~RaevLg~~ls~~l---iL~g~lw~~l~p~~~~~v~L~G~~~f~l~~~L~~~   76 (195)
T PF11152_consen    1 LPLIVGLLGGSLLLLNRLSGA-DATPSQSRAEVLGLILSAVL---ILTGLLWQRLKPRSPEAVDLPGEQGFELSPDLSDA   76 (195)
T ss_pred             CceEehHHHHHHHHhhhcccC-CCCHHHHHHHHHHHHHHHHH---HHHHHHHhhccCCCCCccCCCCccceEECCCCCHH
Confidence            799999999999999997776 79999999999999999666   89999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhccccEEEEEECCEEE-EEeeecCCCCCChhHHHHHHHHhccccccccC------CccccccCCCC
Q 028024          142 LKENLAWATYVLLRNTNSISVLISIRGELC-VRGYWQTPDGASKTQLLEWFERQIENIGLSDL------KDSLYFPQSAG  214 (215)
Q Consensus       142 ~k~ELAWaS~~LLtnT~a~svlV~~~g~~l-~RG~l~~p~d~~~g~I~~~~~~~~~~~yLanL------~~~~Yfp~~~~  214 (215)
                      +|+|||||||+|||||+|+||+|||||++| +||++++++++++|+||+++|++++.+||+|+      .|+-|+|+|+.
T Consensus        77 ~k~ELAWas~~LLt~T~a~svlV~~~g~~llrrG~~~~~~~~~~g~i~~~~~~~~~~~yL~nl~lyPGr~Ef~~lP~ntq  156 (195)
T PF11152_consen   77 AKEELAWASYALLTNTNARSVLVYYDGRVLLRRGILGSPSKFKPGPICQRAMESGKLIYLVNLKLYPGRVEFDYLPENTQ  156 (195)
T ss_pred             HHHHHHHHHHHHHhhCCceEEEEEECCEEEEEeeccCCCCCcchHHHHHHHHhcCCceeccccccCCCchhhhhcCCCCc
Confidence            999999999999999999999999999996 58999999999999999999999999999999      58889999873

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	215
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 1e-05
 Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 66/213 (30%)

Query: 28  SICARLDNSQQEEQQLNL--SVLRFTFGIPGFDESYLPRWIGYGFGSLIVLNHF------ 79
           +  +R D+S   + +++   + LR         + Y           L+VL +       
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLL----KSKPY-EN-------CLLVLLNVQNAKAW 259

Query: 80  -AFSNS----VTSAQLRSEVLGLSLAAFSVTLPYLGKFLKGASPVSQKSLPESGEQIF-- 132
            AF+ S    +T+   R + +   L+A + T   L       +P       E  + +   
Sbjct: 260 NAFNLSCKILLTT---RFKQVTDFLSAATTTHISLDHHSMTLTP------DEV-KSLLLK 309

Query: 133 VMSQNISD----ALKEN-LAWATYVLLRNTNSISVLI--SIRGELCVRGYWQTPDGASKT 185
            +     D     L  N               +S +I  SIR  L     W+  +    T
Sbjct: 310 YLDCRPQDLPREVLTTNPRR------------LS-IIAESIRDGLATWDNWKHVNCDKLT 356

Query: 186 QLLEWFERQIENIGLSDLKDSLY-----FPQSA 213
            ++E     +  +  ++ +  ++     FP SA
Sbjct: 357 TIIESS---LNVLEPAEYRK-MFDRLSVFPPSA 385

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00