Citrus Sinensis ID: 028028

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-----
MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLVTTIGLFHQDLTVLAELIV
cccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccHHccHHHHHcccccccccHHHHHHHHHHcccccccHHHHccccccccccccccccHHcc
cccHHHHHHHHHHHHHHHHHHHHHcccccccccEccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHccccccccccccccHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccEcccEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHcHcccccccccccccccc
MGTKAVFLLLALLSFSAVSLRSALaeneedpglvmnfykdtcpqAEDIIREQVKLLYKRHKNTAFSWLRNIFhdcavqscdaslLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVerecpgvvscaDILVLSGRDgvvalggpyiplktgrrdgrKSRAEILEQylpdhndsMSVVLERFAAIGIDAPGLVALLVTTIGLFHQDLTVLAELIV
MGTKAVFLLLALLSFSAVSLRSALAeneedpglVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDStrktlsekemdrsfgmRNFRYIENIKEAVERECPGVVSCADILVLSGRdgvvalggpyiplktgrrdgrkSRAEILEqylpdhndSMSVVLERFAAIGIDAPGLVALLVTTIGLFHQDLTVLAELIV
MGTKavflllallsfsavslrsalaENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLVTTIGLFHQDLTVLAELIV
****AVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDS************SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKT***********ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLVTTIGLFHQDLTVLAELI*
******F*LLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR**********SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLVTTIGLFHQDLTVLAELIV
MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLVTTIGLFHQDLTVLAELIV
**TKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLVTTIGLFHQDLTVLA*L**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLVTTIGLFHQDLTVLAELIV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query215 2.2.26 [Sep-21-2011]
Q9SB81 330 Peroxidase 42 OS=Arabidop yes no 0.939 0.612 0.741 2e-85
Q42580 327 Peroxidase 21 OS=Arabidop no no 0.8 0.525 0.574 2e-54
O81755 404 Putative Peroxidase 48 OS no no 0.846 0.450 0.371 6e-33
Q9FLC0 324 Peroxidase 52 OS=Arabidop no no 0.753 0.5 0.418 7e-31
Q9SS67 321 Peroxidase 28 OS=Arabidop no no 0.790 0.529 0.415 6e-30
Q02200 322 Lignin-forming anionic pe N/A no 0.758 0.506 0.426 4e-29
Q9SZB9 325 Peroxidase 47 OS=Arabidop no no 0.758 0.501 0.384 4e-29
O23044 326 Peroxidase 3 OS=Arabidops no no 0.795 0.524 0.398 4e-29
Q96519 336 Peroxidase 11 OS=Arabidop no no 0.804 0.514 0.348 6e-29
O23237 331 Peroxidase 49 OS=Arabidop no no 0.790 0.513 0.401 7e-29
>sp|Q9SB81|PER42_ARATH Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2 Back     alignment and function desciption
 Score =  314 bits (805), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 152/205 (74%), Positives = 177/205 (86%), Gaps = 3/205 (1%)

Query: 1   MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRH 60
           MG K V +++A+L   A+S  S  A  E +PGL+MNFYKDTCPQAEDI+REQVKLLYKRH
Sbjct: 1   MGGKGV-MMVAILCLWALSATSE-AVTEAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRH 58

Query: 61  KNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERE 120
           KNTAFSWLRNIFHDCAV+SCDASLLLDSTR+ L EKE DRSFG+RNFRYIE IKEA+ERE
Sbjct: 59  KNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERE 118

Query: 121 CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLE 180
           CPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE
Sbjct: 119 CPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLE 178

Query: 181 RFAAIGIDAPGLVALLVT-TIGLFH 204
           +F +IGID PGLVALL + ++G  H
Sbjct: 179 KFKSIGIDTPGLVALLGSHSVGRTH 203
Might function as heat shock-like defense protein.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q42580|PER21_ARATH Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1 Back     alignment and function description
>sp|O81755|PER48_ARATH Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3 Back     alignment and function description
>sp|Q9FLC0|PER52_ARATH Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1 Back     alignment and function description
>sp|Q9SS67|PER28_ARATH Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1 Back     alignment and function description
>sp|Q02200|PERX_NICSY Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1 Back     alignment and function description
>sp|Q9SZB9|PER47_ARATH Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=2 Back     alignment and function description
>sp|O23044|PER3_ARATH Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=2 SV=1 Back     alignment and function description
>sp|Q96519|PER11_ARATH Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1 Back     alignment and function description
>sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query215
224076226 331 predicted protein [Populus trichocarpa] 0.944 0.613 0.814 1e-95
290760238 332 peroxidase [Bruguiera gymnorhiza] 0.944 0.611 0.800 4e-93
125620184 331 cationic peroxidase [Nelumbo nucifera] 0.944 0.613 0.790 1e-92
341819281 338 class III peroxidase [Hevea brasiliensis 0.869 0.553 0.845 2e-91
167367 332 peroxidase [Gossypium hirsutum] 0.930 0.602 0.785 1e-90
307136213 331 peroxidase [Cucumis melo subsp. melo] 0.874 0.567 0.841 2e-90
251826416 337 peroxidase [Camellia oleifera] 0.944 0.602 0.777 7e-90
225444515 334 PREDICTED: peroxidase 42 isoform 1 [Viti 0.874 0.562 0.836 7e-90
427199292 333 basic peroxidase swpb6 [Ipomoea batatas] 0.930 0.600 0.791 3e-89
94557288 330 secretory peroxidase [Catharanthus roseu 0.930 0.606 0.772 9e-89
>gi|224076226|ref|XP_002304909.1| predicted protein [Populus trichocarpa] gi|118487860|gb|ABK95753.1| unknown [Populus trichocarpa] gi|222847873|gb|EEE85420.1| predicted protein [Populus trichocarpa] gi|225626261|gb|ACN97180.1| peroxidase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 167/205 (81%), Positives = 189/205 (92%), Gaps = 2/205 (0%)

Query: 1   MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRH 60
           M  KA+F   ALLSFSAVS+R ALAENEEDPGLVMNFYKDTCPQAEDI++EQV+LLYKRH
Sbjct: 1   MDAKALFFF-ALLSFSAVSVRPALAENEEDPGLVMNFYKDTCPQAEDIVKEQVRLLYKRH 59

Query: 61  KNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERE 120
           KNTAFSWLRNIFHDCAVQSCDASLLLDSTR+TLSEKE DRSFG+RNFRY ++IKEAVERE
Sbjct: 60  KNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYFDDIKEAVERE 119

Query: 121 CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLE 180
           CPGVVSCADILVLS RDG+V+LGGP+IPLKTGRRDGRKSRA+++E YLPDHN+S+SVVL+
Sbjct: 120 CPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRKSRADVIEDYLPDHNESISVVLD 179

Query: 181 RFAAIGIDAPGLVALL-VTTIGLFH 204
           RFA++GID PGLVALL   ++G  H
Sbjct: 180 RFASMGIDTPGLVALLGAHSVGRTH 204

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|290760238|gb|ADD54644.1| peroxidase [Bruguiera gymnorhiza] Back     alignment and taxonomy information
>gi|125620184|gb|ABN46984.1| cationic peroxidase [Nelumbo nucifera] Back     alignment and taxonomy information
>gi|341819281|gb|AEK87128.1| class III peroxidase [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|167367|gb|AAA99868.1| peroxidase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|307136213|gb|ADN34050.1| peroxidase [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|251826416|gb|ACT21094.1| peroxidase [Camellia oleifera] Back     alignment and taxonomy information
>gi|225444515|ref|XP_002274769.1| PREDICTED: peroxidase 42 isoform 1 [Vitis vinifera] gi|147768417|emb|CAN60224.1| hypothetical protein VITISV_039918 [Vitis vinifera] Back     alignment and taxonomy information
>gi|427199292|gb|AFY26877.1| basic peroxidase swpb6 [Ipomoea batatas] Back     alignment and taxonomy information
>gi|94557288|gb|AAY26520.1| secretory peroxidase [Catharanthus roseus] gi|94959283|gb|ABF47518.1| putative secretory peroxidase [Catharanthus roseus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query215
TAIR|locus:2141637 330 PRXR1 [Arabidopsis thaliana (t 0.823 0.536 0.797 1e-75
TAIR|locus:2061794 327 AT2G37130 [Arabidopsis thalian 0.8 0.525 0.574 4.6e-50
TAIR|locus:2012428 336 AT1G68850 [Arabidopsis thalian 0.804 0.514 0.348 2.7e-29
TAIR|locus:2153529 324 PRX52 "peroxidase 52" [Arabido 0.781 0.518 0.418 3.4e-29
TAIR|locus:2119251 325 AT4G33420 [Arabidopsis thalian 0.790 0.523 0.377 1.2e-28
TAIR|locus:2096419 321 AT3G03670 [Arabidopsis thalian 0.790 0.529 0.415 1.9e-28
TAIR|locus:2115335 331 AT4G36430 [Arabidopsis thalian 0.786 0.510 0.403 5e-28
TAIR|locus:2207210 326 RCI3 "RARE COLD INDUCIBLE GENE 0.795 0.524 0.398 8.2e-28
TAIR|locus:2009318 310 AT1G34510 [Arabidopsis thalian 0.786 0.545 0.387 8.2e-28
TAIR|locus:2128308 326 AT4G11290 [Arabidopsis thalian 0.795 0.524 0.394 1e-27
TAIR|locus:2141637 PRXR1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
 Identities = 142/178 (79%), Positives = 162/178 (91%)

Query:    28 EEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLD 87
             E +PGL+MNFYKDTCPQAEDI+REQVKLLYKRHKNTAFSWLRNIFHDCAV+SCDASLLLD
Sbjct:    26 EAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLD 85

Query:    88 STRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYI 147
             STR+ L EKE DRSFG+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYI
Sbjct:    86 STRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYI 145

Query:   148 PLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLVT-TIGLFH 204
             PLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALL + ++G  H
Sbjct:   146 PLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTH 203
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006833 "water transport" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
TAIR|locus:2061794 AT2G37130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012428 AT1G68850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153529 PRX52 "peroxidase 52" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119251 AT4G33420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096419 AT3G03670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207210 RCI3 "RARE COLD INDUCIBLE GENE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009318 AT1G34510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128308 AT4G11290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SB81PER42_ARATH1, ., 1, 1, ., 1, ., 70.74140.93950.6121yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.914
3rd Layer1.11.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query215
cd00693 298 cd00693, secretory_peroxidase, Horseradish peroxid 3e-78
pfam00141180 pfam00141, peroxidase, Peroxidase 2e-50
PLN03030 324 PLN03030, PLN03030, cationic peroxidase; Provision 8e-40
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 7e-10
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 3e-04
cd00692 328 cd00692, ligninase, Ligninase and other manganese- 6e-04
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  236 bits (604), Expect = 3e-78
 Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 1/165 (0%)

Query: 32  GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRK 91
            L + FY  +CP AE I+R  V+   K     A + LR  FHDC V+ CDAS+LLDST  
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 92  TLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKT 151
             SEK+   +  +R F  I++IK A+E  CPGVVSCADIL L+ RD VV  GGP   +  
Sbjct: 61  NTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPL 120

Query: 152 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL 196
           GRRDGR S A      LP    S+S ++  FA+ G+    LVAL 
Sbjct: 121 GRRDGRVSSAN-DVGNLPSPFFSVSQLISLFASKGLTVTDLVALS 164

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 215
PLN03030 324 cationic peroxidase; Provisional 100.0
cd00693 298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02608 289 L-ascorbate peroxidase 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00692 328 ligninase Ligninase and other manganese-dependent 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd00649 409 catalase_peroxidase_1 N-terminal catalytic domain 99.97
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.97
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 99.95
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 99.9
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.81
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 99.81
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.7
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 96.86
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.4e-67  Score=469.95  Aligned_cols=179  Identities=41%  Similarity=0.656  Sum_probs=171.7

Q ss_pred             CCCCCCcCcccCCCccHHHHHHHHHHHHHHhCcCCccchhhhhcccccccCCCCceecccCCCcccccccCCCCCcchhH
Q 028028           29 EDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFR  108 (215)
Q Consensus        29 ~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~gL~~~~  108 (215)
                      ++++|+++||+++||++|+||+++|++.++++++++|++|||+||||||+||||||||+++   ..|+++++|.+|+||+
T Consensus        21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf~   97 (324)
T PLN03030         21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGYD   97 (324)
T ss_pred             hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchHH
Confidence            4567999999999999999999999999999999999999999999999999999999864   3699999999999999


Q ss_pred             HHHHHHHHHHhhCCCCcchhhHhhhhhcccccccCCCceeeeCCCCCCCCCchhhhccCCCCCCCCHHHHHHHHHhcCCC
Q 028028          109 YIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID  188 (215)
Q Consensus       109 ~i~~iK~~le~~cp~~VScADiialAar~av~~~GGP~~~V~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  188 (215)
                      +|+.||+++|++||++|||||||++||||+|+++|||.|+|++||||+++|.+.++. +||.|+.++++|++.|+++||+
T Consensus        98 ~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~  176 (324)
T PLN03030         98 VIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLN  176 (324)
T ss_pred             HHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999998877664 8999999999999999999999


Q ss_pred             chhhhhhccc-cccccccCCcccc
Q 028028          189 APGLVALLVT-TIGLFHQDLTVLA  211 (215)
Q Consensus       189 ~~dlVALsGa-TiG~~hc~~f~~~  211 (215)
                      .+|||+|||| |||++||.+|..|
T Consensus       177 ~~DlVaLsGAHTiG~ahC~~f~~R  200 (324)
T PLN03030        177 TQDLVTLVGGHTIGTTACQFFRYR  200 (324)
T ss_pred             HHHheeeeeccccceeeeeccccc
Confidence            9999999999 9999999999865

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query215
4a5g_A 308 Raphanus Sativus Anionic Peroxidase. Length = 308 3e-27
1pa2_A 306 Arabidopsis Thaliana Peroxidase A2 Length = 306 3e-27
1bgp_A 309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 1e-25
1sch_A 294 Peanut Peroxidase Length = 294 1e-25
1qgj_A 300 Arabidopsis Thaliana Peroxidase N Length = 300 3e-25
1gwo_A 309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 4e-22
1gwu_A 309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 5e-22
1w4w_A 323 Ferric Horseradish Peroxidase C1a In Complex With F 5e-22
3atj_A 309 Heme Ligand Mutant Of Recombinant Horseradish Perox 6e-22
1gx2_A 309 Recombinant Horseradish Peroxidase Phe209ser Comple 6e-22
1atj_A 306 Recombinant Horseradish Peroxidase C1a Length = 306 6e-22
2atj_A 308 Recombinant Horseradish Peroxidase Complex With Ben 6e-22
6atj_A 308 Recombinant Horseradish Peroxidase C Complex With F 6e-22
1gw2_A 308 Recombinant Horseradish Peroxidase C1a Thr171ser In 6e-22
2ylj_A 306 Horse Radish Peroxidase, Mutant S167y Length = 306 7e-22
3hdl_A 304 Crystal Structure Of Highly Glycosylated Peroxidase 4e-21
4atj_A 309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 6e-21
1kzm_A 308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 3e-20
1fhf_A 304 The Structure Of Soybean Peroxidase Length = 304 7e-20
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 4e-04
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 4e-04
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 4e-04
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure 
Iteration: 1

 Score =  118 bits (295), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Query: 33  LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKT 92
           L   FY  TCP A  ++R  V+  ++       S +R  FHDC V  CDAS+LLD++   
Sbjct: 4   LNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSGSI 63
Query: 93  LSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKT 151
           +SEK     +   R F  ++NIK A+E  CPGVVSC D+L L+ +  V   GGP   +  
Sbjct: 64  ISEKNAGPNANSARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWTVDL 123
Query: 152 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVAL 195
           GRRD   +        +P     +S +  +F+A+G++   LVAL
Sbjct: 124 GRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVAL 167
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query215
1fhf_A 304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 2e-58
1pa2_A 306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 9e-58
3hdl_A 304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-57
1sch_A 294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-57
1gwu_A 309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 8e-57
1bgp_A 309 Barley grain peroxidase; chromoprotein, oxidoreduc 4e-56
1qgj_A 300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 7e-56
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 5e-31
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 9e-31
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 3e-29
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 2e-26
2e39_A 344 Peroxidase; heme protein, coordination geometry of 2e-26
1iyn_A 295 Chloroplastic ascorbate peroxidase; hydrogen perox 8e-26
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 9e-24
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 2e-06
3e2o_A 294 CCP, cytochrome C peroxidase; cytochrome C peroxid 1e-04
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
 Score =  185 bits (471), Expect = 2e-58
 Identities = 56/164 (34%), Positives = 81/164 (49%), Gaps = 1/164 (0%)

Query: 33  LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKT 92
           L   FY++TCP    I+   +            S +R  FHDC VQ CD S+LL++T   
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 93  LSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKT 151
            SE++   +   +R    + +IK AVE  CP  VSCADIL ++     V  GGP  P+  
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPL 121

Query: 152 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVAL 195
           GRRD   +   +  Q LP    +++ +   FA  G++   LV L
Sbjct: 122 GRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTL 165
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query215
3hdl_A 304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1pa2_A 306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1sch_A 294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1fhf_A 304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A 309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A 300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1bgp_A 309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A 295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
2e39_A 344 Peroxidase; heme protein, coordination geometry of 100.0
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3e2o_A 294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 99.97
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 99.97
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=2.5e-68  Score=475.32  Aligned_cols=180  Identities=34%  Similarity=0.533  Sum_probs=175.1

Q ss_pred             CCCcCcccCCCccHHHHHHHHHHHHHHhCcCCccchhhhhcccccccCCCCceecccCCCcccccccCCCC-CcchhHHH
Q 028028           32 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYI  110 (215)
Q Consensus        32 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~-gL~~~~~i  110 (215)
                      .|+++||+++||++|+|||++|++++.++++++|++|||+||||||+||||||||++++++.+|+++++|. ||+||++|
T Consensus         1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vi   80 (304)
T 3hdl_A            1 DLQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVI   80 (304)
T ss_dssp             CCEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHH
T ss_pred             CCccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHH
Confidence            38899999999999999999999999999999999999999999999999999999988888999999997 89999999


Q ss_pred             HHHHHHHHhhCCCCcchhhHhhhhhcccccccCCCceeeeCCCCCCCCCchhhhccCCCCCCCCHHHHHHHHHhcCCCch
Q 028028          111 ENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAP  190 (215)
Q Consensus       111 ~~iK~~le~~cp~~VScADiialAar~av~~~GGP~~~V~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  190 (215)
                      +.||++||++||++|||||||+||||+||+++|||.|+|++||+|++++++..++++||+|+.++++|++.|++|||+.+
T Consensus        81 d~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T 3hdl_A           81 TAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTAD  160 (304)
T ss_dssp             HHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHH
T ss_pred             HHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             hhhhhccc-cccccccCCcccc
Q 028028          191 GLVALLVT-TIGLFHQDLTVLA  211 (215)
Q Consensus       191 dlVALsGa-TiG~~hc~~f~~~  211 (215)
                      |||||||| |||++||.+|..|
T Consensus       161 d~VaLsGaHTiG~ahC~~f~~R  182 (304)
T 3hdl_A          161 EMVTLSGAHSIGVAHCSSFTNR  182 (304)
T ss_dssp             HHHHHGGGGGSSEEEGGGTGGG
T ss_pred             Hhhhhhccccccccccchhhhh
Confidence            99999999 9999999999765
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 215
d1pa2a_ 306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 8e-58
d1qgja_ 300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-57
d1fhfa_ 304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 3e-57
d1gwua_ 307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 5e-55
d1scha_ 294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-54
d1bgpa_ 309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 4e-53
d1yyda1 357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 2e-26
d1llpa_ 343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 8e-26
d2e39a1 336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 3e-22
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 1e-18
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 4e-16
d2euta1 291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 4e-13
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]

 Score =  182 bits (463), Expect = 8e-58
 Identities = 64/174 (36%), Positives = 88/174 (50%), Gaps = 2/174 (1%)

Query: 33  LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKT 92
           L   FY  TCP A  I+R  ++   +       S +R  FHDC V  CDAS+LLD T   
Sbjct: 3   LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSI 62

Query: 93  LSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKT 151
            SEK    +    R F  ++NIK A+E  CPGVVSC+D+L L+    V   GGP   +  
Sbjct: 63  QSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLL 122

Query: 152 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLV-TTIGLFH 204
           GRRD   +        +P   +S+S +  +F+A+G++   LVAL    T G   
Sbjct: 123 GRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRAR 176
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query215
d1fhfa_ 304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_ 306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_ 307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_ 309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1qgja_ 300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1scha_ 294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1 357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1 336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_ 343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1 291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.91
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.9
d1itka1 406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.89
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.89
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.89
d1mwva1 406 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.88
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.88
d1ub2a1 406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.86
d2ccaa1 410 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.85
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1.9e-66  Score=461.42  Aligned_cols=180  Identities=32%  Similarity=0.470  Sum_probs=175.0

Q ss_pred             CCCcCcccCCCccHHHHHHHHHHHHHHhCcCCccchhhhhcccccccCCCCceecccCCCcccccccCCCCCc-chhHHH
Q 028028           32 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYI  110 (215)
Q Consensus        32 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~gL-~~~~~i  110 (215)
                      ||+.+||++|||++|+||+++|++.+.+|++++|++|||+||||||+||||||||++++++.+|+++++|.++ +||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            7999999999999999999999999999999999999999999999999999999998888899999999865 999999


Q ss_pred             HHHHHHHHhhCCCCcchhhHhhhhhcccccccCCCceeeeCCCCCCCCCchhhhccCCCCCCCCHHHHHHHHHhcCCCch
Q 028028          111 ENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAP  190 (215)
Q Consensus       111 ~~iK~~le~~cp~~VScADiialAar~av~~~GGP~~~V~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  190 (215)
                      +.||++||+.||++|||||||+||||+||+++|||+|+|++||+|+++|+..++..+||.|+.++++|++.|+++|||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             hhhhhccc-cccccccCCcccc
Q 028028          191 GLVALLVT-TIGLFHQDLTVLA  211 (215)
Q Consensus       191 dlVALsGa-TiG~~hc~~f~~~  211 (215)
                      |||||+|| |||++||.+|..|
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~r  182 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINR  182 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGG
T ss_pred             HHHHHhhhhhhccccccccccc
Confidence            99999999 9999999999876
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure