Citrus Sinensis ID: 028035


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-----
MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYNTVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSRWIACVSGIVQTALYADFFYYYFISWKNNAKLQLPA
ccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcEEEEEEEEEEcccEEEccc
ccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHEEEHHHHHHHHHHHHHHHHHHHHHcccEEEccc
mnifrfagDMTHLISILVLLLKIYATkscsgislkTQELYALVFLTRYLDLFTDFISVYNTVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEIFWAFSIYLEAVAILPQLVLLqrsgnvdnltgQYVFFLGAYRAFYILNWIYRYITEPHFSRWIACVSGIVQTALYADFFYYYFISWknnaklqlpa
mnifrfagdMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYNTVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSRWIACVSGIVQTALYADFFYYYFISWKNNAKLQLPA
MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYNTVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSRWIACVSGIVQTALYADFFYYYFISWKNNAKLQLPA
**IFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYNTVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSRWIACVSGIVQTALYADFFYYYFISWKNN*******
MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYNTVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSRWIACVSGIVQTALYADFFYYYFISWKNNAKLQLP*
MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYNTVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSRWIACVSGIVQTALYADFFYYYFISWKNNAKLQLPA
MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYNTVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSRWIACVSGIVQTALYADFFYYYFISWKNNAKLQL**
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
ooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
oooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYNTVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSRWIACVSGIVQTALYADFFYYYFISWKNNAKLQLPA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query215 2.2.26 [Sep-21-2011]
P35402215 ER lumen protein retainin yes no 1.0 1.0 0.837 1e-106
Q9ZTN2215 ER lumen protein retainin N/A no 1.0 1.0 0.744 3e-92
O76767212 ER lumen protein retainin yes no 0.986 1.0 0.544 1e-63
Q5XHA2212 ER lumen protein retainin yes no 0.986 1.0 0.539 8e-59
Q68ES4212 ER lumen protein retainin N/A no 0.986 1.0 0.539 3e-58
Q611C8213 ER lumen protein retainin N/A no 0.986 0.995 0.518 5e-58
Q5ZKX9212 ER lumen protein retainin yes no 0.986 1.0 0.544 5e-58
Q5U305212 ER lumen protein retainin yes no 0.986 1.0 0.539 1e-57
Q9CQM2212 ER lumen protein retainin yes no 0.986 1.0 0.539 1e-57
Q2KJ37212 ER lumen protein retainin yes no 0.986 1.0 0.539 1e-57
>sp|P35402|ERD2_ARATH ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1 Back     alignment and function desciption
 Score =  385 bits (989), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 180/215 (83%), Positives = 201/215 (93%)

Query: 1   MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYN 60
           MNIFRFAGDM+HLIS+L+LLLKIYATKSC+GISLKTQELYALVFLTRYLDLFTD++S+YN
Sbjct: 1   MNIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN 60

Query: 61  TVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEI 120
           ++MK+VFIASSLAIVWCMR H  VRR+YDK+LDTFRH +++ ACFVL LILNEKFT QE+
Sbjct: 61  SIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFTVQEV 120

Query: 121 FWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSR 180
           FWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYV FLGAYR  YI+NWIYRY TE HF+R
Sbjct: 121 FWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVVFLGAYRGLYIINWIYRYFTEDHFTR 180

Query: 181 WIACVSGIVQTALYADFFYYYFISWKNNAKLQLPA 215
           WIACVSG+VQTALYADFFYYY+ISWK N KL+LPA
Sbjct: 181 WIACVSGLVQTALYADFFYYYYISWKTNTKLKLPA 215




Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes H-D-E-L.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9ZTN2|ERD2_PETHY ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1 Back     alignment and function description
>sp|O76767|ERD2_DROME ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA2|ERD21_XENTR ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1 Back     alignment and function description
>sp|Q68ES4|ER21B_XENLA ER lumen protein retaining receptor 1-B OS=Xenopus laevis GN=kdelr1-b PE=2 SV=1 Back     alignment and function description
>sp|Q611C8|ERD2_CAEBR ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1 Back     alignment and function description
>sp|Q5ZKX9|ERD22_CHICK ER lumen protein retaining receptor 2 OS=Gallus gallus GN=KDELR2 PE=2 SV=1 Back     alignment and function description
>sp|Q5U305|ERD22_RAT ER lumen protein retaining receptor 2 OS=Rattus norvegicus GN=Kdelr2 PE=2 SV=1 Back     alignment and function description
>sp|Q9CQM2|ERD22_MOUSE ER lumen protein retaining receptor 2 OS=Mus musculus GN=Kdelr2 PE=2 SV=1 Back     alignment and function description
>sp|Q2KJ37|ERD22_BOVIN ER lumen protein retaining receptor 2 OS=Bos taurus GN=KDELR2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query215
225443728215 PREDICTED: ER lumen protein retaining re 1.0 1.0 0.906 1e-112
298201213215 ER luminal protein receptor 2a [Nicotian 1.0 1.0 0.869 1e-108
188509937215 ERD2-like protein [Gossypium raimondii] 1.0 1.0 0.879 1e-107
449433672215 PREDICTED: ER lumen protein retaining re 1.0 1.0 0.860 1e-107
449479209215 PREDICTED: LOW QUALITY PROTEIN: ER lumen 1.0 1.0 0.855 1e-106
307136187215 ER lumen protein retaining receptor [Cuc 1.0 1.0 0.860 1e-106
297851352215 hypothetical protein ARALYDRAFT_473143 [ 1.0 1.0 0.846 1e-106
18397049215 ER lumen protein retaining receptor [Ara 1.0 1.0 0.837 1e-105
255562510215 er lumen protein retaining receptor, put 1.0 1.0 0.902 1e-104
351724579215 uncharacterized protein LOC100306692 [Gl 1.0 1.0 0.865 1e-101
>gi|225443728|ref|XP_002267990.1| PREDICTED: ER lumen protein retaining receptor [Vitis vinifera] gi|297740541|emb|CBI30723.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  408 bits (1049), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/215 (90%), Positives = 207/215 (96%)

Query: 1   MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYN 60
           MNIFR AGDMTHL+SILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYN
Sbjct: 1   MNIFRLAGDMTHLMSILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYN 60

Query: 61  TVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEI 120
           TVMKLVFI SSLAIVWCMRMHR V+R+YD +LDTFRHYFL+AACF+ +LI++EKFTFQEI
Sbjct: 61  TVMKLVFIGSSLAIVWCMRMHRTVKRSYDGQLDTFRHYFLVAACFLSALIVHEKFTFQEI 120

Query: 121 FWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSR 180
           FWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRA YILNWIYRY TE HFSR
Sbjct: 121 FWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRALYILNWIYRYFTEQHFSR 180

Query: 181 WIACVSGIVQTALYADFFYYYFISWKNNAKLQLPA 215
           WIAC+SG+VQTALYADFFYYYFISWKNN+KLQLPA
Sbjct: 181 WIACISGLVQTALYADFFYYYFISWKNNSKLQLPA 215




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298201213|gb|ADI60302.1| ER luminal protein receptor 2a [Nicotiana benthamiana] Back     alignment and taxonomy information
>gi|188509937|gb|ACD56623.1| ERD2-like protein [Gossypium raimondii] Back     alignment and taxonomy information
>gi|449433672|ref|XP_004134621.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449479209|ref|XP_004155536.1| PREDICTED: LOW QUALITY PROTEIN: ER lumen protein retaining receptor-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|307136187|gb|ADN34026.1| ER lumen protein retaining receptor [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|297851352|ref|XP_002893557.1| hypothetical protein ARALYDRAFT_473143 [Arabidopsis lyrata subsp. lyrata] gi|297339399|gb|EFH69816.1| hypothetical protein ARALYDRAFT_473143 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18397049|ref|NP_564326.1| ER lumen protein retaining receptor [Arabidopsis thaliana] gi|544250|sp|P35402.1|ERD2_ARATH RecName: Full=ER lumen protein retaining receptor; AltName: Full=HDEL receptor gi|9502409|gb|AAF88108.1|AC021043_1 endoplasmic reticulum retention receptor Erd2 [Arabidopsis thaliana] gi|12323512|gb|AAG51724.1|AC068667_3 ER lumen protein retaining receptor; 3333-1007 [Arabidopsis thaliana] gi|20260682|gb|AAM13239.1| ER lumen protein retaining receptor; 3333-1007 [Arabidopsis thaliana] gi|32189301|gb|AAP75805.1| At1g29330 [Arabidopsis thaliana] gi|332192952|gb|AEE31073.1| ER lumen protein retaining receptor [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255562510|ref|XP_002522261.1| er lumen protein retaining receptor, putative [Ricinus communis] gi|223538514|gb|EEF40119.1| er lumen protein retaining receptor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|351724579|ref|NP_001235015.1| uncharacterized protein LOC100306692 [Glycine max] gi|255629293|gb|ACU14991.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query215
TAIR|locus:2013683215 ERD2 "AT1G29330" [Arabidopsis 1.0 1.0 0.837 2.4e-99
TAIR|locus:2086954215 ERD2B "AT3G25040" [Arabidopsis 1.0 1.0 0.720 3.7e-87
FB|FBgn0022268212 KdelR "KDEL receptor" [Drosoph 0.986 1.0 0.544 2.7e-61
WB|WBGene00001331213 erd-2 [Caenorhabditis elegans 0.986 0.995 0.513 2.5e-56
UNIPROTKB|Q5ZKX9212 KDELR2 "ER lumen protein retai 0.986 1.0 0.544 4.2e-56
UNIPROTKB|F1N840212 KDELR2 "ER lumen protein retai 0.986 1.0 0.539 6.8e-56
UNIPROTKB|Q2KJ37212 KDELR2 "ER lumen protein retai 0.986 1.0 0.539 6.8e-56
UNIPROTKB|E2QXL5212 KDELR2 "ER lumen protein retai 0.986 1.0 0.539 6.8e-56
MGI|MGI:1914163212 Kdelr2 "KDEL (Lys-Asp-Glu-Leu) 0.986 1.0 0.539 6.8e-56
RGD|1304618212 Kdelr2 "KDEL (Lys-Asp-Glu-Leu) 0.986 1.0 0.539 6.8e-56
TAIR|locus:2013683 ERD2 "AT1G29330" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 986 (352.1 bits), Expect = 2.4e-99, P = 2.4e-99
 Identities = 180/215 (83%), Positives = 201/215 (93%)

Query:     1 MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYN 60
             MNIFRFAGDM+HLIS+L+LLLKIYATKSC+GISLKTQELYALVFLTRYLDLFTD++S+YN
Sbjct:     1 MNIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN 60

Query:    61 TVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEI 120
             ++MK+VFIASSLAIVWCMR H  VRR+YDK+LDTFRH +++ ACFVL LILNEKFT QE+
Sbjct:    61 SIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFTVQEV 120

Query:   121 FWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSR 180
             FWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYV FLGAYR  YI+NWIYRY TE HF+R
Sbjct:   121 FWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVVFLGAYRGLYIINWIYRYFTEDHFTR 180

Query:   181 WIACVSGIVQTALYADFFYYYFISWKNNAKLQLPA 215
             WIACVSG+VQTALYADFFYYY+ISWK N KL+LPA
Sbjct:   181 WIACVSGLVQTALYADFFYYYYISWKTNTKLKLPA 215




GO:0004872 "receptor activity" evidence=ISS
GO:0006621 "protein retention in ER lumen" evidence=IEA;IGI
GO:0015031 "protein transport" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA;ISS
GO:0046923 "ER retention sequence binding" evidence=IEA
GO:0005801 "cis-Golgi network" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006914 "autophagy" evidence=RCA
GO:0009414 "response to water deprivation" evidence=RCA
GO:0042538 "hyperosmotic salinity response" evidence=RCA
GO:0005046 "KDEL sequence binding" evidence=IGI
TAIR|locus:2086954 ERD2B "AT3G25040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0022268 KdelR "KDEL receptor" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00001331 erd-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZKX9 KDELR2 "ER lumen protein retaining receptor 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N840 KDELR2 "ER lumen protein retaining receptor" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KJ37 KDELR2 "ER lumen protein retaining receptor 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXL5 KDELR2 "ER lumen protein retaining receptor" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1914163 Kdelr2 "KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1304618 Kdelr2 "KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P18414ERD2_YEASTNo assigned EC number0.45410.99530.9771yesno
P18413ERD2_KLULANo assigned EC number0.47700.99060.9726yesno
Q611C8ERD2_CAEBRNo assigned EC number0.51850.98600.9953N/Ano
Q5ZKX9ERD22_CHICKNo assigned EC number0.54410.98601.0yesno
Q76NM1ERD2_PLAF7No assigned EC number0.47000.99060.9638yesno
P35402ERD2_ARATHNo assigned EC number0.83721.01.0yesno
Q9ZTN2ERD2_PETHYNo assigned EC number0.74411.01.0N/Ano
Q68ES4ER21B_XENLANo assigned EC number0.53950.98601.0N/Ano
O94270ERD2_SCHPONo assigned EC number0.45580.98601.0yesno
O76767ERD2_DROMENo assigned EC number0.54410.98601.0yesno
Q6PAB8ER21A_XENLANo assigned EC number0.53020.98601.0N/Ano
Q2KJ37ERD22_BOVINNo assigned EC number0.53950.98601.0yesno
Q86JE5ERD2_DICDINo assigned EC number0.53630.98130.9678yesno
O42580ERD23_XENLANo assigned EC number0.52800.98130.9859N/Ano
P48583ERD2_CAEELNo assigned EC number0.51380.98600.9953yesno
P33947ERD22_HUMANNo assigned EC number0.52550.98601.0yesno
Q7ZXS5ERD22_XENLANo assigned EC number0.50690.98601.0N/Ano
Q9CQM2ERD22_MOUSENo assigned EC number0.53950.98601.0yesno
P33948ERD2_PLAFANo assigned EC number0.47000.99060.9638yesno
Q5U305ERD22_RATNo assigned EC number0.53950.98601.0yesno
Q6PEH1ERD22_DANRENo assigned EC number0.50690.98601.0yesno
Q5XHA2ERD21_XENTRNo assigned EC number0.53950.98601.0yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query215
COG5196214 COG5196, ERD2, ER lumen protein retaining receptor 4e-65
pfam00810143 pfam00810, ER_lumen_recept, ER lumen protein retai 4e-64
>gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion] Back     alignment and domain information
 Score =  200 bits (509), Expect = 4e-65
 Identities = 106/216 (49%), Positives = 137/216 (63%), Gaps = 3/216 (1%)

Query: 1   MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFT-DFISVY 59
           M+ FRF GD  HL SI VL+ KI  T+SCSG+SLKTQ LY+LVF+TRYLDLF     S+Y
Sbjct: 1   MDTFRFLGDFLHLASIAVLIHKIKRTRSCSGLSLKTQFLYSLVFITRYLDLFDFYARSLY 60

Query: 60  NTVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQE 119
           N++MK++FI S + I++ MR     R TYDK+LDTF    L+    V SL      T   
Sbjct: 61  NSLMKILFIGSQVYILFLMRF--KYRSTYDKKLDTFNILTLLVGSAVFSLFFTRGGTISN 118

Query: 120 IFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFS 179
           + W FS++LE+VAILPQLV+LQ +G  ++LT  YVF +G YRA YI  WI R + +   +
Sbjct: 119 VLWTFSLWLESVAILPQLVMLQEAGETESLTSHYVFAMGLYRALYIPYWILRKVYDIKKT 178

Query: 180 RWIACVSGIVQTALYADFFYYYFISWKNNAKLQLPA 215
             IA  +GIVQT LY DFF  Y+          LP+
Sbjct: 179 GNIAIAAGIVQTLLYLDFFAIYYRYVFRGKSFSLPS 214


Length = 214

>gnl|CDD|144416 pfam00810, ER_lumen_recept, ER lumen protein retaining receptor Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 215
KOG3106212 consensus ER lumen protein retaining receptor [Int 100.0
COG5196214 ERD2 ER lumen protein retaining receptor [Intracel 100.0
PF00810147 ER_lumen_recept: ER lumen protein retaining recept 100.0
TIGR00951220 2A43 Lysosomal Cystine Transporter. 96.12
PF0419361 PQ-loop: PQ loop repeat 94.57
PF0419361 PQ-loop: PQ loop repeat 91.63
KOG3211230 consensus Predicted endoplasmic reticulum membrane 91.56
smart0067932 CTNS Repeated motif present between transmembrane 86.36
>KOG3106 consensus ER lumen protein retaining receptor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
Probab=100.00  E-value=2.9e-90  Score=578.78  Aligned_cols=212  Identities=61%  Similarity=1.012  Sum_probs=209.3

Q ss_pred             CchhhhhhhhHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHc
Q 028035            1 MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYNTVMKLVFIASSLAIVWCMRM   80 (215)
Q Consensus         1 mn~fr~~gd~~hl~s~~iLl~Ki~~~kS~~GiSlkTQ~ly~ivf~~Ryldl~~~~~s~Y~~~mki~~i~~s~~iiyli~~   80 (215)
                      ||.||++||++|++|+++|++||+|+|||+|||+|||+|||+||++||+|+|+.++|.||++||++++++|.+++|+|++
T Consensus         1 mn~fr~~gd~~H~~~i~vLi~Ki~ktrsCaGiSlKSQ~L~Alvf~~Ryldlf~~~~s~ynt~mki~fl~~t~~ivymi~~   80 (212)
T KOG3106|consen    1 MNNFRFAGDLSHLAAIIVLILKIWKTKSCAGISLKSQELFALVFATRYLDLFTFYESLYNTIMKIAFLASTLWIVYMIRF   80 (212)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999899999999999999999999999999


Q ss_pred             ccccccccccccccccchhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHHHhhhHHHHHHhcCCccchHHHHHHHHHHH
Q 028035           81 HRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAY  160 (215)
Q Consensus        81 ~~~~~~Ty~~~~Dtf~~~~li~p~~vLa~l~~~~~~~~ei~WtfSi~LEsvAiLPQL~ml~k~~~ve~ltshYv~~Lg~y  160 (215)
                        |+|+|||+|+|||+++|+++||++||+++||++++.|++||||+|||||||||||+|+||+||+|++|+||++|||+|
T Consensus        81 --k~~~tYd~~~DtFri~~llvp~~vlsl~i~~~~t~~eilWtFsiyLEsVaILPQL~~lq~tg~~E~~TahYvfaLG~y  158 (212)
T KOG3106|consen   81 --KLRATYDKEKDTFRIEYLLVPSAVLSLLINHSFTILEILWTFSIYLESVAILPQLFMLQKTGEAETITAHYLFALGLY  158 (212)
T ss_pred             --HHHHHHhcccCceeEEEEehhheeeeeeecCCccHHHHHHHHHHHHHHHHHhHHHHHHHhcCCccchHHHHHHHHHHH
Confidence              999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhhhcCCCccchhHhHHHHHHHHHHhhhhheeeeehccCccccCCC
Q 028035          161 RAFYILNWIYRYITEPHFSRWIACVSGIVQTALYADFFYYYFISWKNNAKLQLPA  215 (215)
Q Consensus       161 R~ly~~~Wi~~y~~~~~~~~~~~i~~givqt~l~~DF~y~Y~~~~~~G~~~~Lp~  215 (215)
                      |++|++|||+|+..|+. +|++++++|+|||++||||||+|++++++|||++||+
T Consensus       159 R~ly~~~WI~r~~~e~~-~~~iai~agiVQT~ly~DFfy~Y~~~v~~g~~~~LP~  212 (212)
T KOG3106|consen  159 RALYIANWIYRYVTEDF-WDPIAIVAGIVQTVLYADFFYLYVTKVLQGKKLKLPA  212 (212)
T ss_pred             HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHhHHHHHHHHHHcCCcCCCCC
Confidence            99999999999999885 5999999999999999999999999999999999995



>COG5196 ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion] Back     alignment and domain information
>PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00