Citrus Sinensis ID: 028059

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mrapkrpihavstwvrrqppkVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEktcaglslkSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLrssymedkdnfAIYYVVVPCAVLALlihpstshniLNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW
Flexible Loop (DISEMBL)
mrapkrpihavstwvrrqppKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW
Low Complexity Region (SEG)
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHtlldlatlattlWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW
Disordered region (IsUnstruct)
*********AVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTC*
Disordered Region (DISOPRED)
***************RRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW
Disordered Region (DISEMBL)
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW
Disordered Region (DISPRO)
*****RPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	214	2.2.26 [Sep-21-2011]
Q09473	213	Putative ER lumen protein	yes	no	0.714	0.718	0.378	4e-21
P48583	213	ER lumen protein retainin	no	no	0.747	0.751	0.349	4e-21
Q611C8	213	ER lumen protein retainin	N/A	no	0.724	0.727	0.341	8e-21
O44017	215	ER lumen protein retainin	N/A	no	0.728	0.725	0.354	2e-20
P35402	215	ER lumen protein retainin	no	no	0.719	0.716	0.357	4e-20
O76767	212	ER lumen protein retainin	yes	no	0.714	0.721	0.359	8e-20
Q5XHA2	212	ER lumen protein retainin	yes	no	0.691	0.698	0.360	1e-19
Q86JE5	218	ER lumen protein retainin	yes	no	0.733	0.720	0.331	1e-19
Q6PAB8	212	ER lumen protein retainin	N/A	no	0.691	0.698	0.341	2e-19
Q68ES4	212	ER lumen protein retainin	N/A	no	0.691	0.698	0.348	5e-19

>sp|Q09473|ERD22_CAEEL Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=3 SV=1

 Score =  101 bits (251), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 102/164 (62%), Gaps = 11/164 (6%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           N+F ++A+  H + I +L+ K+ K ++C+G+S +SQ L A+    R   L+ +++  Y+ 
Sbjct: 2   NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN 162
            T + +  LA T   +Y++ F  RS+YM + D F +  ++VP A+LALLI+    H+   
Sbjct: 61  -TTMKITFLAATYATVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLIN----HDFAP 115

Query: 163 -RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVAR 205
             + W F +YLEAV++LPQL ++Q+T   E  TAHY+FALG  R
Sbjct: 116 FELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYR 159

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.
Caenorhabditis elegans (taxid: 6239)

>sp|P48583|ERD2_CAEEL ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=3 SV=2

 Score =  101 bits (251), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 98/169 (57%), Gaps = 9/169 (5%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           NLF   A+  H+I I VL+ K+ K ++C G+S +SQ L A+    R   L+ +F   Y+ 
Sbjct: 2   NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN 162
            T + +  L  +   +Y++    +++Y  + D+F I ++V+P  +LALLI+      I  
Sbjct: 61  -TAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEF---IFM 116

Query: 163 RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVD 211
            + W F +YLEAV+++PQL ++  T   E  TAHY+FALG  RF  +++
Sbjct: 117 EVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYILN 165

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Caenorhabditis elegans (taxid: 6239)

>sp|Q611C8|ERD2_CAEBR ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1

 Score =  100 bits (249), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 98/164 (59%), Gaps = 9/164 (5%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           N+F + A+  H++ I +L+ K+ K ++C G+S +SQ L A+    R   L+ SF   Y+ 
Sbjct: 2   NIFRITADLAHAVAIVILLLKIWKSRSCEGISGRSQILFAVTFFTRYLDLFTSFYSLYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN 162
            T++ +  LA ++  +Y++    +++Y  + D F I ++V+P  +LAL+I+      +  
Sbjct: 61  -TVMKVLFLAGSIGTVYLMWVKFKATYDRNNDTFRIEFLVIPSIILALIINHEF---MFM 116

Query: 163 RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARF 206
            + W F +YLEAV+++PQL ++  T   E  TAHY+FALG  RF
Sbjct: 117 EVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRF 160

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Caenorhabditis briggsae (taxid: 6238)

>sp|O44017|ERD2_ENTHI ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1

 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 94/161 (58%), Gaps = 5/161 (3%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIH-T 104
           NLF ++A+ VH + I  L+ K++  K C G+SL+SQ L  I    R    F   Y ++ T
Sbjct: 4   NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSLYNT 63

Query: 105 LLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRI 164
           +L +  L T+ + IY+I    R++Y +  D   ++Y++VPC VLA +     S   +  I
Sbjct: 64  ILKIVYLTTSAYTIYLISKRFRATYDKIHDTLNVWYLIVPCIVLAFIFTEDYS---ITEI 120

Query: 165 FWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVAR 205
            W F ++LEAV++LPQ+ ++++T  VE   + Y+F LG+ R
Sbjct: 121 CWTFSIFLEAVAILPQILLLRSTGEVENLNSQYIFCLGLYR 161

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Entamoeba histolytica (taxid: 5759)

>sp|P35402|ERD2_ARATH ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1

 Score = 98.2 bits (243), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 100/165 (60%), Gaps = 11/165 (6%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           N+F  A +  H I + +L+ K+   K+CAG+SLK+QEL A+    R   L+  +V  Y+ 
Sbjct: 2   NIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNI 160
            +++ +  +A++L +++ +R +  +R SY +D D F   YVV+ C VL L+++   +   
Sbjct: 61  -SIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFT--- 116

Query: 161 LNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVAR 205
           +  +FWAF +YLEAV++LPQL ++Q +  V+  T  YV  LG  R
Sbjct: 117 VQEVFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVVFLGAYR 161

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes H-D-E-L.

Arabidopsis thaliana (taxid: 3702)

>sp|O76767|ERD2_DROME ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1

 Score = 97.1 bits (240), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 11/164 (6%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           N+F  A +  H   I +L+ K+ K ++CAG+S KSQ L A+    R   L+ ++V  Y+ 
Sbjct: 2   NIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNIL 161
            +++ +  LAT+   +Y++    +++Y  + D+F I +++VPCA+L+L+I H  T   +L
Sbjct: 61  -SVMKVLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVL 119

Query: 162 NRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVAR 205
               W F +YLE+V++LPQL ++  T   E  T+HY+FALG  R
Sbjct: 120 ----WTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYR 159

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Drosophila melanogaster (taxid: 7227)

>sp|Q5XHA2|ERD21_XENTR ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 93/158 (58%), Gaps = 10/158 (6%)

Query: 52  AEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHTLLDL 108
            +  H   I +L+ K+ K ++CAG+S KSQ L AI    R   L+ +F+  Y+  T + +
Sbjct: 8   GDISHLSAILILLLKIWKSRSCAGISGKSQLLFAIVFTTRYLDLFTNFISLYN--TSMKM 65

Query: 109 ATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWA 167
             +A++   I+MI    +++Y  + D F + +++VP A+LA L+ H  T   IL    W 
Sbjct: 66  VYVASSYATIWMIYSKFKATYDGNHDTFRVEFLIVPTAILAFLVNHDFTPLEIL----WT 121

Query: 168 FCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVAR 205
           F +YLE+V++LPQL ++  T   E  T+HY+FALG+ R
Sbjct: 122 FSIYLESVAILPQLFMVSKTGEAETITSHYLFALGIYR 159

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Xenopus tropicalis (taxid: 8364)

>sp|Q86JE5|ERD2_DICDI ER lumen protein retaining receptor OS=Dictyostelium discoideum GN=kdelr PE=3 SV=1

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 97/166 (58%), Gaps = 9/166 (5%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           NLF    + +H   + +L++K+  +K+CAG+SLKSQ L  I    R   L+ ++V  Y  
Sbjct: 2   NLFSFLGDMLHLGSMLILLFKIKNDKSCAGVSLKSQILFTIVFTARYLDLFTNYVSLYI- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN 162
            T + +  +A + + +++I    + +Y +D D F I Y++  CA+L+L+ +  T+  I +
Sbjct: 61  -TFMKITYIAVSYYTLHLIARKYKFTYDKDHDTFKIVYLIASCAILSLITYDKTTIGIYS 119

Query: 163 ---RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVAR 205
               I W F +YLE++++LPQL ++Q T  VE  T++Y+  LG  R
Sbjct: 120 TFLEILWTFSIYLESIAILPQLILLQRTGEVEALTSNYIVLLGGYR 165

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q6PAB8|ER21A_XENLA ER lumen protein retaining receptor 1-A OS=Xenopus laevis GN=kdelr1-a PE=2 SV=1

 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 94/158 (59%), Gaps = 10/158 (6%)

Query: 52  AEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHTLLDL 108
            +  H   I +L+ K+ K ++CAG+S KSQ L AI    R   L+ +++  Y+  T + +
Sbjct: 8   GDISHLSAIFILLLKIWKSRSCAGISGKSQLLFAIVFTARYLDLFTNYISFYN--TSMKV 65

Query: 109 ATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN-RIFWA 167
             +A++   ++MI    +++Y  + D F + +++VP A+LA L++    H+     IFW 
Sbjct: 66  VYVASSYATVWMIYSKFKATYDGNHDTFRVEFLIVPTAILAFLVN----HDFTPLEIFWT 121

Query: 168 FCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVAR 205
           F +YLE+V++LPQL ++  T   E  T+HY+FALG+ R
Sbjct: 122 FSIYLESVAILPQLFMVSKTGEAETITSHYLFALGIYR 159

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Xenopus laevis (taxid: 8355)

>sp|Q68ES4|ER21B_XENLA ER lumen protein retaining receptor 1-B OS=Xenopus laevis GN=kdelr1-b PE=2 SV=1

 Score = 94.4 bits (233), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 93/158 (58%), Gaps = 10/158 (6%)

Query: 52  AEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHTLLDL 108
            +  H   I +L+ K+ K ++CAG+S KSQ L AI    R   L+ +F+  Y+  T + +
Sbjct: 8   GDISHLSAIIILLLKIWKSRSCAGISGKSQLLFAIVFTTRYLDLFTNFISFYN--TSMKV 65

Query: 109 ATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWA 167
             +A++   ++MI    +++Y  + D F + +++VP A+L+ L+ H  T   IL    W 
Sbjct: 66  VYVASSYATVWMIYSKFKATYDGNHDTFRVEFLIVPTAILSFLVNHDFTPLEIL----WT 121

Query: 168 FCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVAR 205
           F +YLE+V++LPQL ++  T   E  T+HY+FALG+ R
Sbjct: 122 FSIYLESVAILPQLFMVSKTGEAETITSHYLFALGIYR 159

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
255576737	272	ER lumen protein retaining receptor, put	0.962	0.757	0.961	1e-112
224103251	272	predicted protein [Populus trichocarpa]	0.962	0.757	0.922	1e-109
224080568	272	predicted protein [Populus trichocarpa]	0.962	0.757	0.917	1e-107
388500700	272	unknown [Medicago truncatula]	0.962	0.757	0.917	1e-107
356508031	272	PREDICTED: ER lumen protein retaining re	0.962	0.757	0.912	1e-106
297821309	269	ER lumen protein retaining receptor fami	0.948	0.754	0.926	1e-106
225427894	272	PREDICTED: ER lumen protein retaining re	0.962	0.757	0.912	1e-106
356516732	272	PREDICTED: ER lumen protein retaining re	0.962	0.757	0.902	1e-106
356544080	272	PREDICTED: ER lumen protein retaining re	0.962	0.757	0.912	1e-105
255645423	272	unknown [Glycine max]	0.962	0.757	0.898	1e-105

>gi|255576737|ref|XP_002529256.1| ER lumen protein retaining receptor, putative [Ricinus communis] gi|223531292|gb|EEF33134.1| ER lumen protein retaining receptor, putative [Ricinus communis]

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/206 (96%), Positives = 203/206 (98%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MRAPKRPIHAVSTWVRRQPPKVKAFLAVV+GMAALV LRFIVHDHDNLFVAAEAVHSIGI
Sbjct: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVAGMAALVFLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
            VLIYKLMKEKTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHTLLDLATL TTLWVIYM
Sbjct: 61  IVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDLATLGTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRFNL+SSYMEDKDNFAIYYVVVPCA+LALLIHPSTSHNI+NRIFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFNLKSSYMEDKDNFAIYYVVVPCAILALLIHPSTSHNIVNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206
           LRVMQNTKIVEPFTAHYVFALGVARF
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103251|ref|XP_002312984.1| predicted protein [Populus trichocarpa] gi|222849392|gb|EEE86939.1| predicted protein [Populus trichocarpa]

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/206 (92%), Positives = 201/206 (97%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR P+RPIH V+TWVRRQPPKVKAFLAVV+GM+ALVLLRFIVHDHDNLFVAAEAVHSIGI
Sbjct: 1   MRPPRRPIHVVTTWVRRQPPKVKAFLAVVAGMSALVLLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKLMKEKTCAGLSLK+QELTA+FLAVRLYCSFVMEYDIHT+LDLATLATTLWVIYM
Sbjct: 61  SVLIYKLMKEKTCAGLSLKTQELTAMFLAVRLYCSFVMEYDIHTILDLATLATTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRFNL+SSYMEDKDNFA+YYV  PCAVLALLIHPST+HN+LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFNLKSSYMEDKDNFALYYVAAPCAVLALLIHPSTAHNLLNRILWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206
           LRVMQNTKIVEPFTAHYVFALGVARF
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080568|ref|XP_002306165.1| predicted protein [Populus trichocarpa] gi|222849129|gb|EEE86676.1| predicted protein [Populus trichocarpa]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 189/206 (91%), Positives = 197/206 (95%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR PKRPI  V+TWVRRQPPKVKAFLAVV+GM ALVLLRFIVHDHDNLFVAAEAVHSIGI
Sbjct: 1   MRPPKRPIQVVTTWVRRQPPKVKAFLAVVAGMTALVLLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKLMKEKTCAGLSLK+QELTA+FLAVRLYCSFVMEYDIHT+LDLATLATTLWVIY 
Sbjct: 61  SVLIYKLMKEKTCAGLSLKTQELTAMFLAVRLYCSFVMEYDIHTVLDLATLATTLWVIYT 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L+SSYMEDKDNFA+YYV  PCAVLALLIHPSTSHN+LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFALYYVAAPCAVLALLIHPSTSHNLLNRILWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206
           LRVMQNTKIVEPFTAHYVFALGVARF
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500700|gb|AFK38416.1| unknown [Medicago truncatula]

 Score =  391 bits (1005), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 189/206 (91%), Positives = 199/206 (96%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR  +  IHA+STWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHS+GI
Sbjct: 1   MRPQRTSIHAISTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHT+LDLAT  TT+WVIYM
Sbjct: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATFVTTVWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L++SYME+KDNFAIYYVV+PCAVLALLIHPSTSH+ILNRIFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206
           LRVMQNTKIVEPFTAHYVFALGVARF
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508031|ref|XP_003522766.1| PREDICTED: ER lumen protein retaining receptor-like [Glycine max]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/206 (91%), Positives = 200/206 (97%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR+ K+ IHA++TWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHS+GI
Sbjct: 1   MRSGKKSIHAITTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKL+KEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLAT ATTLWVIYM
Sbjct: 61  SVLIYKLIKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATFATTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L+SSYME+KDNFAIYYVV+PCAVLAL IHPSTSH++LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEEKDNFAIYYVVIPCAVLALFIHPSTSHHLLNRISWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206
           LRVMQNT+IVEPFTAHYVFALGVARF
Sbjct: 181 LRVMQNTQIVEPFTAHYVFALGVARF 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821309|ref|XP_002878537.1| ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata] gi|297324376|gb|EFH54796.1| ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/203 (92%), Positives = 197/203 (97%)

Query: 5   KRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLI 64
           K PIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLI
Sbjct: 2   KTPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLI 61

Query: 65  YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFN 124
           YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHT+LDLATL TTLWVIYMIRF 
Sbjct: 62  YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYMIRFK 121

Query: 125 LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVM 184
           L+++YME+KDNFA+YYV+VPC VLA+LIHPSTSHNILNRI W FCVYLEAVSVLPQLRVM
Sbjct: 122 LKATYMEEKDNFALYYVLVPCVVLAVLIHPSTSHNILNRISWGFCVYLEAVSVLPQLRVM 181

Query: 185 QNTKIVEPFTAHYVFALGVARFW 207
           QNTKIVEPFTAHYVFALGVARF+
Sbjct: 182 QNTKIVEPFTAHYVFALGVARFF 204

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427894|ref|XP_002273333.1| PREDICTED: ER lumen protein retaining receptor [Vitis vinifera]

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/206 (91%), Positives = 195/206 (94%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR P+RPIH VS WVRRQPPKVKAFLAVVSGMAAL LLR +VHDHDNLFVAAEAVHSIGI
Sbjct: 1   MRPPRRPIHTVSAWVRRQPPKVKAFLAVVSGMAALALLRIVVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
            VLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLD ATL TTLWVIYM
Sbjct: 61  CVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDSATLGTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L+SSYMEDKDNFAIYYVV PCA+LAL+IHPSTSH+ +NRIFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFRLKSSYMEDKDNFAIYYVVGPCALLALVIHPSTSHHFVNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206
           LRVMQNTKIVEPFTAHYVFALGVARF
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516732|ref|XP_003527047.1| PREDICTED: ER lumen protein retaining receptor-like [Glycine max]

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/206 (90%), Positives = 199/206 (96%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR+ ++ IHA++TWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFV AEAVHS+GI
Sbjct: 1   MRSGRKSIHAITTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVTAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKL+KEKTCAGLSLKSQELTAIFL+VRLYCSFVMEYDIHTLLDLATL TTLWVIYM
Sbjct: 61  SVLIYKLIKEKTCAGLSLKSQELTAIFLSVRLYCSFVMEYDIHTLLDLATLVTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L+SSYMEDKDNFAIYYV++PCAVLAL IHPSTSH++LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFAIYYVMIPCAVLALFIHPSTSHHLLNRIAWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206
           LRVMQNTKIVEPFTAHYVFALGVARF
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544080|ref|XP_003540483.1| PREDICTED: ER lumen protein retaining receptor-like [Glycine max]

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/206 (91%), Positives = 197/206 (95%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR  +  IHAV+TWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHS+GI
Sbjct: 1   MRPQRTSIHAVTTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKLMKE+TCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLD AT  TTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDFATFVTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L++SYME+KDNFAIYYVVVPCAVLALLIHPSTSH++LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKASYMEEKDNFAIYYVVVPCAVLALLIHPSTSHHLLNRISWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206
           LRVMQNTKIVEPFTAHYVFALGVARF
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645423|gb|ACU23207.1| unknown [Glycine max]

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/206 (89%), Positives = 198/206 (96%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR+ ++ IHA++TWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFV AEAVHS+GI
Sbjct: 1   MRSGRKSIHAITTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVTAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKL+KEKTCAGLSLKSQELT IFL+VRLYCSFVMEYDIHTLLDLATL TTLWVIYM
Sbjct: 61  SVLIYKLIKEKTCAGLSLKSQELTVIFLSVRLYCSFVMEYDIHTLLDLATLVTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L+SSYMEDKDNFAIYYV++PCAVLAL IHPSTSH++LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFAIYYVMIPCAVLALFIHPSTSHHLLNRIAWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206
           LRVMQNTKIVEPFTAHYVFALGVARF
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARF 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2047052	269	AT2G21190 "AT2G21190" [Arabido	0.948	0.754	0.862	3.5e-91
TAIR|locus:2141796	273	AT4G38790 "AT4G38790" [Arabido	0.990	0.776	0.8	2e-88
TAIR|locus:2005619	272	AT1G75760 "AT1G75760" [Arabido	0.990	0.779	0.771	2.9e-87
TAIR|locus:2198601	272	AT1G19970 "AT1G19970" [Arabido	0.990	0.779	0.730	2.7e-84
TAIR|locus:2090255	272	AT3G25160 "AT3G25160" [Arabido	0.957	0.753	0.556	1.3e-59
WB|WBGene00016195	213	C28H8.4 [Caenorhabditis elegan	0.724	0.727	0.351	1.8e-23
WB|WBGene00001331	213	erd-2 [Caenorhabditis elegans	0.752	0.755	0.333	1.5e-21
RGD|1306764	212	Kdelr1 "KDEL (Lys-Asp-Glu-Leu)	0.752	0.759	0.350	1.7e-20
UNIPROTKB|P24390	212	KDELR1 "ER lumen protein retai	0.752	0.759	0.344	2.1e-20
UNIPROTKB|F2Z4Z3	212	KDELR1 "ER lumen protein retai	0.752	0.759	0.344	2.1e-20

TAIR|locus:2047052 AT2G21190 "AT2G21190" [Arabidopsis thaliana (taxid:3702)]

 Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
 Identities = 175/203 (86%), Positives = 184/203 (90%)

Query:     5 KRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLI 64
             K PIHAVSTWVRRQPPKVKAFLAVVSGMAALVLL+ IVHDHDNLFVAAEAVHSIGISVLI
Sbjct:     2 KTPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLKLIVHDHDNLFVAAEAVHSIGISVLI 61

Query:    65 YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN 124
             YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIH            WVIYMIRFN
Sbjct:    62 YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYMIRFN 121

Query:   125 LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVM 184
             L+++YME+KDNFA+YYV+ PC VLA+ IHPSTSHNILNRI W FCVYLEAVSVLPQLRVM
Sbjct:   122 LKTTYMEEKDNFALYYVLAPCVVLAVWIHPSTSHNILNRISWGFCVYLEAVSVLPQLRVM 181

Query:   185 QNTKIVEPFTAHYVFALGVARFW 207
             QNTKIVEPFTAHYVFALGVARF+
Sbjct:   182 QNTKIVEPFTAHYVFALGVARFF 204

GO:0004872 "receptor activity" evidence=ISS

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

TAIR|locus:2141796 AT4G38790 "AT4G38790" [Arabidopsis thaliana (taxid:3702)]

 Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
 Identities = 176/220 (80%), Positives = 186/220 (84%)

Query:     1 MRAP-KRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIG 59
             M+A  K PIH V +WVRRQPPKVKAFLAVV+GMAALVLLRFIVHDHDNLFVAAEAVHSIG
Sbjct:     1 MKATTKTPIHVVWSWVRRQPPKVKAFLAVVTGMAALVLLRFIVHDHDNLFVAAEAVHSIG 60

Query:    60 ISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIY 119
             I VLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCS VMEYDIH            WVI+
Sbjct:    61 ICVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSIVMEYDIHTILDLATLGTTLWVIF 120

Query:   120 MIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLP 179
             MIRF LR+SYMEDKDNF +YYV+ PC  LA+ IHPSTSHNI+NRI WA CVYLEAVSVLP
Sbjct:   121 MIRFKLRASYMEDKDNFPLYYVLAPCVALAVFIHPSTSHNIINRISWALCVYLEAVSVLP 180

Query:   180 QLRVMQNTKIVEPFTAHYVFALGVARF-----WI--VVDT 212
             QLRVMQNTKIVEPFTAHYVFALGVARF     W+  VVDT
Sbjct:   181 QLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVVDT 220

GO:0004872 "receptor activity" evidence=ISS

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

TAIR|locus:2005619 AT1G75760 "AT1G75760" [Arabidopsis thaliana (taxid:3702)]

 Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
 Identities = 169/219 (77%), Positives = 188/219 (85%)

Query:     1 MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
             M+A  RPIHAV+TWVRRQPPKVK FL VVS M ALVLLR IVHDHDNLFVAAEAVHS+GI
Sbjct:     1 MKAATRPIHAVTTWVRRQPPKVKGFLGVVSAMTALVLLRVIVHDHDNLFVAAEAVHSLGI 60

Query:    61 SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYM 120
             SVLIYKL KE+TCAGLSLKSQELTA+FLAVRLYCSFVME+DIH            +VIYM
Sbjct:    61 SVLIYKLTKERTCAGLSLKSQELTALFLAVRLYCSFVMEFDIHTLLDSATLVTTLFVIYM 120

Query:   121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
             IRF L++SYM+DKDNFAIYYVV+PC VL++LIHPST H+I+N+I WAFCVYLEAVSVLPQ
Sbjct:   121 IRFKLKASYMDDKDNFAIYYVVIPCVVLSVLIHPSTHHHIINKISWAFCVYLEAVSVLPQ 180

Query:   181 LRVMQNTKIVEPFTAHYVFALGVARF-----WI--VVDT 212
             LRVMQNTKIVEPFTAHYVFALG+ARF     W+  V+DT
Sbjct:   181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDT 219

GO:0004872 "receptor activity" evidence=ISS

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0006007 "glucose catabolic process" evidence=RCA

TAIR|locus:2198601 AT1G19970 "AT1G19970" [Arabidopsis thaliana (taxid:3702)]

 Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
 Identities = 160/219 (73%), Positives = 183/219 (83%)

Query:     1 MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
             M+A K PI +V  W+RRQPPKVKAFL VV+ M  LVLLR IVH+HDNLFVA+EAVH++GI
Sbjct:     1 MKAEKNPIQSVMAWIRRQPPKVKAFLGVVTAMTVLVLLRVIVHEHDNLFVASEAVHAVGI 60

Query:    61 SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYM 120
             +VLIYKL KEKTCAG+SLK+QELTA+FLAVRLYCSFVME+D+H            WV+YM
Sbjct:    61 AVLIYKLTKEKTCAGISLKTQELTALFLAVRLYCSFVMEFDLHTFLDSATLVTTLWVVYM 120

Query:   121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
             IRF LR +YMEDKDNFAIY+VV+PCAVL+  IHPST H+I+NRI WAFCVYLEAVSVLPQ
Sbjct:   121 IRFKLRPTYMEDKDNFAIYFVVIPCAVLSFFIHPSTRHHIINRISWAFCVYLEAVSVLPQ 180

Query:   181 LRVMQNTKIVEPFTAHYVFALGVARF-----WI--VVDT 212
             LRVMQNTKIVEPFTAHYVFALG+ARF     WI  V+DT
Sbjct:   181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWILQVLDT 219

GO:0004872 "receptor activity" evidence=ISS

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

TAIR|locus:2090255 AT3G25160 "AT3G25160" [Arabidopsis thaliana (taxid:3702)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 118/212 (55%), Positives = 157/212 (74%)

Query:     8 IHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKL 67
             ++ V  W+R+Q  KVK  L ++  +  +VLL+F V +H++ F+A+E +H+ GI +LIYKL
Sbjct:    10 VNVVFGWLRQQSNKVKIALGIIISLILVVLLKFTVRNHNHFFIASELIHAAGILILIYKL 69

Query:    68 MKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRS 127
              ++KTC+GLSLKSQE+TAIFLAVRL CS  ME DIH            WVIYMIR+ L++
Sbjct:    70 TRQKTCSGLSLKSQEVTAIFLAVRLICSINMEGDIHTVLDFATLVSTLWVIYMIRYKLKA 129

Query:   128 SYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNT 187
             SY++  D    YYV+VP A+LAL+I+PSTS++  +RI WAFCVY E+VSVLPQLR+MQN 
Sbjct:   130 SYIKSLDTCYNYYVLVPSAILALIINPSTSYSYFHRILWAFCVYTESVSVLPQLRLMQNA 189

Query:   188 KIVEPFTAHYVFALGVARF-----WI--VVDT 212
             +I+EPFTAHYVFALG+ARF     WI  VV+T
Sbjct:   190 QIIEPFTAHYVFALGIARFLACAHWIIQVVET 221

GO:0004872 "receptor activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

WB|WBGene00016195 C28H8.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 57/162 (35%), Positives = 93/162 (57%)

Query:    47 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXX 105
             N+F ++A+  H + I +L+ K+ K ++C+G+S +SQ L A+    R    F     ++  
Sbjct:     2 NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYNT 61

Query:   106 XXXXXXXXXXWV-IYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN-R 163
                       +  +Y++ F  RS+YM + D F +  ++VP A+LALLI+    H+     
Sbjct:    62 TMKITFLAATYATVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLIN----HDFAPFE 117

Query:   164 IFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVAR 205
             + W F +YLEAV++LPQL ++Q+T   E  TAHY+FALG  R
Sbjct:   118 LLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYR 159

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

WB|WBGene00001331 erd-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 56/168 (33%), Positives = 92/168 (54%)

Query:    47 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXX 105
             NLF   A+  H+I I VL+ K+ K ++C G+S +SQ L A+    R    F   +  +  
Sbjct:     2 NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYNT 61

Query:   106 XXXXXXXXXXW-VIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHN-ILNR 163
                       +  +Y++    +++Y  + D+F I ++V+P  +LALLI+    H  I   
Sbjct:    62 AMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLIN----HEFIFME 117

Query:   164 IFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVD 211
             + W F +YLEAV+++PQL ++  T   E  TAHY+FALG  RF  +++
Sbjct:   118 VMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYILN 165

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

RGD|1306764 Kdelr1 "KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1" [Rattus norvegicus (taxid:10116)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 61/174 (35%), Positives = 95/174 (54%)

Query:    47 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
             NLF    +  H + I +L+ K+ K ++CAG+S KSQ L A+    R   L+ +++  Y+ 
Sbjct:     2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT 61

Query:   103 HXXXXXXX-XXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNI 160
                           W+IY  +F  +++Y  + D F + ++VVP AVLA L+ H  T   I
Sbjct:    62 CMKVVYIACSFTTVWMIYS-KF--KATYDGNHDTFRVEFLVVPTAVLAFLVNHDFTPLEI 118

Query:   161 LNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW 214
             L    W F +YLE+V++LPQL ++  T   E  T+HY+FALGV R   + +  W
Sbjct:   119 L----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIW 168

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA;ISO

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0005801 "cis-Golgi network" evidence=IDA

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

UNIPROTKB|P24390 KDELR1 "ER lumen protein retaining receptor 1" [Homo sapiens (taxid:9606)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 60/174 (34%), Positives = 95/174 (54%)

Query:    47 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
             NLF    +  H + I +L+ K+ K ++CAG+S KSQ L A+    R   L+ +++  Y+ 
Sbjct:     2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT 61

Query:   103 HXXXXXXX-XXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNI 160
                           W+IY  +F  +++Y  + D F + ++VVP A+LA L+ H  T   I
Sbjct:    62 CMKVVYIACSFTTVWLIYS-KF--KATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEI 118

Query:   161 LNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW 214
             L    W F +YLE+V++LPQL ++  T   E  T+HY+FALGV R   + +  W
Sbjct:   119 L----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIW 168

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005801 "cis-Golgi network" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IDA

GO:0005046 "KDEL sequence binding" evidence=TAS

GO:0016020 "membrane" evidence=TAS

GO:0006886 "intracellular protein transport" evidence=TAS

UNIPROTKB|F2Z4Z3 KDELR1 "ER lumen protein retaining receptor" [Sus scrofa (taxid:9823)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 60/174 (34%), Positives = 95/174 (54%)

Query:    47 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
             NLF    +  H + I +L+ K+ K ++CAG+S KSQ L A+    R   L+ +++  Y+ 
Sbjct:     2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT 61

Query:   103 HXXXXXXX-XXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNI 160
                           W+IY  +F  +++Y  + D F + ++VVP A+LA L+ H  T   I
Sbjct:    62 CMKVVYIACSFTTVWMIYS-KF--KATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEI 118

Query:   161 LNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW 214
             L    W F +YLE+V++LPQL ++  T   E  T+HY+FALGV R   + +  W
Sbjct:   119 L----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIW 168

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0006621 "protein retention in ER lumen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
pfam00810	143	pfam00810, ER_lumen_recept, ER lumen protein retai	4e-46
COG5196	214	COG5196, ERD2, ER lumen protein retaining receptor	3e-25

>gnl|CDD|144416 pfam00810, ER_lumen_recept, ER lumen protein retaining receptor

 Score =  149 bits (378), Expect = 4e-46
 Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 9/144 (6%)

Query: 72  TCAGLSLKSQELTAIFLAVRLYCSFVMEYDIH-TLLDLATLATTLWVIYMIRFNLRSSYM 130
           +C+GLSLK+Q L AI    R    F     ++ T++ +  + ++++ IY+++F  +++Y 
Sbjct: 1   SCSGLSLKTQILYAIVFLTRYLDLFEGYISLYNTIMKILFIVSSVYTIYLMKFKYKATYD 60

Query: 131 EDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIV 190
            D D F I Y++VPC VLAL+ H          I W F +YLE+V++LPQL ++Q T  V
Sbjct: 61  RDIDTFKIEYLIVPCLVLALIFH---HSYSFLEILWTFSIYLESVAILPQLFMLQKTGEV 117

Query: 191 EPFTAHYVFALGVAR-----FWIV 209
           E  T+HY+FALG+ R      WI 
Sbjct: 118 ENLTSHYLFALGLYRALYILNWIY 141

Length = 143

>gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion]

 Score = 97.6 bits (243), Expect = 3e-25
 Identities = 50/152 (32%), Positives = 89/152 (58%), Gaps = 5/152 (3%)

Query: 56  HSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYD--IHTLLDLATLAT 113
           H   I+VLI+K+ + ++C+GLSLK+Q L ++    R    F        ++L+ +  + +
Sbjct: 12  HLASIAVLIHKIKRTRSCSGLSLKTQFLYSLVFITRYLDLFDFYARSLYNSLMKILFIGS 71

Query: 114 TLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLE 173
            +++++++RF  RS+Y +  D F I  ++V  AV +L         I N + W F ++LE
Sbjct: 72  QVYILFLMRFKYRSTYDKKLDTFNILTLLVGSAVFSLFFT--RGGTISN-VLWTFSLWLE 128

Query: 174 AVSVLPQLRVMQNTKIVEPFTAHYVFALGVAR 205
           +V++LPQL ++Q     E  T+HYVFA+G+ R
Sbjct: 129 SVAILPQLVMLQEAGETESLTSHYVFAMGLYR 160

Length = 214

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
KOG3106	212	consensus ER lumen protein retaining receptor [Int	100.0
COG5196	214	ERD2 ER lumen protein retaining receptor [Intracel	100.0
PF00810	147	ER_lumen_recept: ER lumen protein retaining recept	100.0
KOG3211	230	consensus Predicted endoplasmic reticulum membrane	96.35
TIGR00951	220	2A43 Lysosomal Cystine Transporter.	96.35
PF04193	61	PQ-loop: PQ loop repeat	94.76
PF04193	61	PQ-loop: PQ loop repeat	93.31
smart00679	32	CTNS Repeated motif present between transmembrane	85.66
PHA02246	192	hypothetical protein	85.58

>KOG3106 consensus ER lumen protein retaining receptor [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=8.9e-69  Score=453.26  Aligned_cols=167  Identities=46%  Similarity=0.758  Sum_probs=162.3

Q ss_pred             chHHHHHhhHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhhhcccce-echhHHHHHHHHHHHHHHHHHHHHhc
Q 028059           45 HDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFV-MEYDIHTLLDLATLATTLWVIYMIRF  123 (214)
Q Consensus        45 ~~~~~llgdl~hl~s~~iLl~KI~~~kS~~GlSlkTQ~Ly~lVf~~R~~~~~~-~~y~~~t~~k~~~l~~s~~iiyli~~  123 (214)
                      +|.||++||++|++|+++|++||+|+|||+|||+|||+||++||++||+|+|. .++++|++||+++++++.+++|+|++
T Consensus         1 mn~fr~~gd~~H~~~i~vLi~Ki~ktrsCaGiSlKSQ~L~Alvf~~Ryldlf~~~~s~ynt~mki~fl~~t~~ivymi~~   80 (212)
T KOG3106|consen    1 MNNFRFAGDLSHLAAIIVLILKIWKTKSCAGISLKSQELFALVFATRYLDLFTFYESLYNTIMKIAFLASTLWIVYMIRF   80 (212)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999987 56778999999999999999999999


Q ss_pred             ccccccccccccccchhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhhhhHHHHHHhcCCccchHHHHHHHHHH
Q 028059          124 NLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGV  203 (214)
Q Consensus       124 ~~k~Tyd~~~Dtf~~~~liip~~vLali~~p~~~~~~~~eilWtFSiyLEsvAILPQL~mlqk~g~vE~lTshYv~~LG~  203 (214)
                      |+|+|||+|+|||+++|+++||+++|+++||+.+   +.|++||||+|||||||||||+|+||+||+|++|+||++|||+
T Consensus        81 k~~~tYd~~~DtFri~~llvp~~vlsl~i~~~~t---~~eilWtFsiyLEsVaILPQL~~lq~tg~~E~~TahYvfaLG~  157 (212)
T KOG3106|consen   81 KLRATYDKEKDTFRIEYLLVPSAVLSLLINHSFT---ILEILWTFSIYLESVAILPQLFMLQKTGEAETITAHYLFALGL  157 (212)
T ss_pred             HHHHHHhcccCceeEEEEehhheeeeeeecCCcc---HHHHHHHHHHHHHHHHHhHHHHHHHhcCCccchHHHHHHHHHH
Confidence            9999999999999999999999999999999854   8999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcC
Q 028059          204 ARFWIVVDTCW  214 (214)
Q Consensus       204 yR~ly~inWi~  214 (214)
                      ||++|++||||
T Consensus       158 yR~ly~~~WI~  168 (212)
T KOG3106|consen  158 YRALYIANWIY  168 (212)
T ss_pred             HHHHHHHHHHH
Confidence            99999999996

>COG5196 ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion]

Probab=100.00  E-value=4.1e-59  Score=389.47  Aligned_cols=167  Identities=29%  Similarity=0.558  Sum_probs=158.4

Q ss_pred             chHHHHHhhHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhhhcccceec--hhHHHHHHHHHHHHHHHHHHHHh
Q 028059           45 HDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVME--YDIHTLLDLATLATTLWVIYMIR  122 (214)
Q Consensus        45 ~~~~~llgdl~hl~s~~iLl~KI~~~kS~~GlSlkTQ~Ly~lVf~~R~~~~~~~~--y~~~t~~k~~~l~~s~~iiyli~  122 (214)
                      .|.||++||++|++|+.+|+.||.++|+|+|+|+|||.||++||++||+|.+...  .-+|.+||+++++++.+++++|+
T Consensus         1 m~~Fr~lGD~~Hlasi~vLih~ik~tr~csGlSlKtq~Ly~lVfitRYldLf~f~~~slYn~lMki~FI~s~~yI~~lm~   80 (214)
T COG5196           1 MDTFRFLGDFLHLASIAVLIHKIKRTRSCSGLSLKTQFLYSLVFITRYLDLFDFYARSLYNSLMKILFIGSQVYILFLMR   80 (214)
T ss_pred             CcHHHHHhHHHHHHHHHHHHHHhhhcceecceehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999999999999999887332  22579999999999999999999


Q ss_pred             cccccccccccccccchhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhhhhHHHHHHhcCCccchHHHHHHHHH
Q 028059          123 FNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALG  202 (214)
Q Consensus       123 ~~~k~Tyd~~~Dtf~~~~liip~~vLali~~p~~~~~~~~eilWtFSiyLEsvAILPQL~mlqk~g~vE~lTshYv~~LG  202 (214)
                      .++++||||..|||+++++++||+++|+++|.+   ..+.+++||||+|||||||+|||+|+||.||-|++|+||++++|
T Consensus        81 ~~~r~tYdk~lDtF~i~~ll~gsav~slff~~~---~tisnvlwtfS~wLESVAILPQL~mLq~~GeteslT~hYvfamg  157 (214)
T COG5196          81 FKYRSTYDKKLDTFNILTLLVGSAVFSLFFTRG---GTISNVLWTFSLWLESVAILPQLVMLQEAGETESLTSHYVFAMG  157 (214)
T ss_pred             hcccchHHHhhhhhhhhhhhhhhhhheeeecCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeHHHHHHHHH
Confidence            999999999999999999999999999999865   56999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcC
Q 028059          203 VARFWIVVDTCW  214 (214)
Q Consensus       203 ~yR~ly~inWi~  214 (214)
                      +||++|++||||
T Consensus       158 LYRalYip~wI~  169 (214)
T COG5196         158 LYRALYIPYWIL  169 (214)
T ss_pred             HHHHhhhhHHHH
Confidence            999999999996

>PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway

Probab=100.00  E-value=7.8e-56  Score=362.77  Aligned_cols=142  Identities=40%  Similarity=0.732  Sum_probs=134.6

Q ss_pred             ccccccchhhHHHHHHHhhhhcccceec---hhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhHHHHHH
Q 028059           72 TCAGLSLKSQELTAIFLAVRLYCSFVME---YDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVL  148 (214)
Q Consensus        72 S~~GlSlkTQ~Ly~lVf~~R~~~~~~~~---y~~~t~~k~~~l~~s~~iiyli~~~~k~Tyd~~~Dtf~~~~liip~~vL  148 (214)
                      ||+|+|+|||+||++|+++||+|+...+   ..+|++||++++++|++++|+|+.|||+|||+++|+|+..++++||++|
T Consensus         1 S~~GlSlktq~ly~~vf~~Ryldl~~f~~~~s~y~~~~k~~~i~~s~~iiyli~~~~~~Ty~~~~D~f~~~~li~p~~vL   80 (147)
T PF00810_consen    1 SCSGLSLKTQILYAIVFLTRYLDLFWFESYLSLYNTIMKVFFIVSSLYIIYLIFFKYKSTYDKEIDTFRLEYLIVPCFVL   80 (147)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhheeehhhhhccccchhhhHHHHHHHHH
Confidence            8999999999999999999999993322   2257999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCcchhhHHHHHHHHHHHHhhhhhHHHHHHhcCCccchHHHHHHHHHHHHHHHHhhhcC
Q 028059          149 ALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTCW  214 (214)
Q Consensus       149 ali~~p~~~~~~~~eilWtFSiyLEsvAILPQL~mlqk~g~vE~lTshYv~~LG~yR~ly~inWi~  214 (214)
                      |+++|| .+++++.|++||||+|||||||+|||+|+||+||+|++|+||+++||+||++|++|||+
T Consensus        81 a~i~~p-~~~~~~~ei~wtfSi~LEsvAIlPQL~m~~k~~~ve~ltshYv~~Lg~yR~ly~~~Wi~  145 (147)
T PF00810_consen   81 ALIFHP-LNSFFFLEILWTFSIYLESVAILPQLFMLQKTGEVENLTSHYVFALGLYRALYLLNWIY  145 (147)
T ss_pred             HHHHhc-cccchHHHHHHHHHHHHHHHHHhHHHHHHHHhcCeeehHHHHHHHHHHHHHHHHHHHHH
Confidence            999999 67899999999999999999999999999999999999999999999999999999985

The receptor for this signal is a ~26 kDa Golgi membrane protein, initially identified as the ERD2 gene product in S. cerevisiae. The receptor molecule, known variously as the ER lumen protein retaining receptor or the 'KDEL receptor', is believed to cycle between the cis side of the Golgi apparatus and the ER. It has also been characterised in a number of other species, including plants, Plasmodium, Drosophila and mammals. In mammals, 2 highly related forms of the receptor are known. The KDEL receptor is a highly hydrophobic protein of 220 residues; its sequence exhibits 7 hydrophobic regions, all of which have been suggested to traverse the membrane []. More recently, however, it has been suggested that only 6 of these regions are transmembrane (TM), resulting in both N- and C-termini on the cytoplasmic side of the membrane.; GO: 0046923 ER retention sequence binding, 0006621 protein retention in ER lumen, 0016021 integral to membrane

>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only]

Probab=96.35  E-value=0.091  Score=46.18  Aligned_cols=140  Identities=19%  Similarity=0.202  Sum_probs=85.7

Q ss_pred             HHHHHhhccccccccchhhHHHHHHHhhhhcccceechhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccchhhh
Q 028059           63 LIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVV  142 (214)
Q Consensus        63 Ll~KI~~~kS~~GlSlkTQ~Ly~lVf~~R~~~~~~~~y~~~t~~k~~~l~~s~~iiyli~~~~k~Tyd~~~Dtf~~~~li  142 (214)
                      =+.||..+||+.|+|..+|+|=++-++.-+--.+.+.|+.-+.+|..++..+..++-++.+.|+-.- -..|.+--.+.+
T Consensus        49 QI~kI~aakSa~GLSv~s~~LElvgytvtl~Y~~~~g~pFss~gE~~fLl~Q~vili~~if~f~~~~-~~~v~~l~~~~~  127 (230)
T KOG3211|consen   49 QIMKIRAAKSARGLSVVSLLLELVGYTVTLSYSYTSGYPFSSYGEYPFLLLQAVILILCIFHFSGQT-VTVVQFLGYIAL  127 (230)
T ss_pred             HHHHHHhhcccccccHHHHHHHHHHHHheeeehhhcCCCchhHHHHHHHHHHHHHHHHHHHHhccce-eehhhHHHHHHH
Confidence            3589999999999999999988887764432122333444577899999999988888888877111 112333333333


Q ss_pred             HHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhhhhHHHHHHhc---CCccchHHHHHHHHHHHHHHH
Q 028059          143 VPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNT---KIVEPFTAHYVFALGVARFWI  208 (214)
Q Consensus       143 ip~~vLali~~p~~~~~~~~eilWtFSiyLEsvAILPQL~mlqk~---g~vE~lTshYv~~LG~yR~ly  208 (214)
                      ++....+    +.. ..++.+..=+-.+-.-.++=+||..-..|+   |...-+|.---+.=.+.|.++
T Consensus       128 v~~~~~s----k~~-p~~~~~L~~~~~l~i~v~sr~~Qi~~n~~~~~tgqls~it~fLsf~g~lARift  191 (230)
T KOG3211|consen  128 VVSVLAS----KAL-PLWIITLAQNLCLPIVVVSRLLQIQCNYHNRSTGQLSLITVFLSFGGCLARIFT  191 (230)
T ss_pred             HHHHHHH----hhh-hHHHHHHHHhcCchhhhHHHHHHHHHHhcccccchhHHHHHHHHhhhHHHHHHH
Confidence            3322222    211 122333333333334457889999988886   566666655555555666665

>TIGR00951 2A43 Lysosomal Cystine Transporter

Probab=96.35  E-value=0.091  Score=45.77  Aligned_cols=138  Identities=16%  Similarity=0.183  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHHhhccccccccchhhHHHHHHHhhh-------hccc-ceechh---HHHHHHHHHH-----HHHHHHHH
Q 028059           56 HSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR-------LYCS-FVMEYD---IHTLLDLATL-----ATTLWVIY  119 (214)
Q Consensus        56 hl~s~~iLl~KI~~~kS~~GlSlkTQ~Ly~lVf~~R-------~~~~-~~~~y~---~~t~~k~~~l-----~~s~~iiy  119 (214)
                      ...+++-=+.|++|+||++|+|+..-.+-.+.+++-       +++. ...+|.   +....|-+++     +.++.+++
T Consensus        15 ~~~~~~PQi~~n~k~ks~~GlS~~~~~l~~~g~~~~~~yn~~~~~~~~~~~~~~~~~~~v~~edl~~ai~~~il~~l~~~   94 (220)
T TIGR00951        15 WSISFYPQIIKNWRRKSAEGLSFDFVMLNLVGFTAYVIFNFLQLYCWSITNEFPLSSPGVTQNDVFFTLHAILICFIVLH   94 (220)
T ss_pred             HHHHHhhHHHHHHhccccCCcCHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccCCCcHHHHHHHHHHHHHHHHHHH
Confidence            556667778999999999999999988655555433       2211 111121   1111122222     22232323


Q ss_pred             HHhccccccccccccccc----chhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhhhhHHHHHHhcCCccchHH
Q 028059          120 MIRFNLRSSYMEDKDNFA----IYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTA  195 (214)
Q Consensus       120 li~~~~k~Tyd~~~Dtf~----~~~liip~~vLali~~p~~~~~~~~eilWtFSiyLEsvAILPQL~mlqk~g~vE~lTs  195 (214)
                      .+. ++.+..++...+..    ..++.+.+..+..+..+ .....+.+.++...+-+-.++-+||..+-.|.|..+.+..
T Consensus        95 q~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~~iki~is~ikyiPQi~~Ny~~ksT~glSi  172 (220)
T TIGR00951        95 QCG-DYERGWQRVSNPWILRILVALLACFATLLVALLSP-ITPLAFVTMLSYIKVAVTLVKYFPQAATNYHNKSTGQLSI  172 (220)
T ss_pred             HHh-hccccccccchhHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCCcCCH
Confidence            221 22111111111111    01222222222233332 2224567777778888888899999999999875554433

>PF04193 PQ-loop: PQ loop repeat

Probab=94.76  E-value=0.12  Score=35.39  Aligned_cols=52  Identities=15%  Similarity=0.177  Sum_probs=46.2

Q ss_pred             hHHHHHHHHHHHHhhhhhHHHHHHhcCCccchHHHHHHHHHHHHHHHHhhhc
Q 028059          162 NRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFWIVVDTC  213 (214)
Q Consensus       162 ~eilWtFSiyLEsvAILPQL~mlqk~g~vE~lTshYv~~LG~yR~ly~inWi  213 (214)
                      .+++...+.-+++++-+||+....|++++|.+.--++.......++.+++.+
T Consensus         2 ~~~~g~i~~~~~~~~~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~~~~   53 (61)
T PF04193_consen    2 SNILGIISIVLWIISFLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVLYSI   53 (61)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHccccccccHHHHHHHHHHHHHHHHHHH
Confidence            4678889999999999999999999999999999999988888888877754

>PF04193 PQ-loop: PQ loop repeat

Probab=93.31  E-value=0.16  Score=34.82  Aligned_cols=46  Identities=26%  Similarity=0.101  Sum_probs=36.3

Q ss_pred             HHHHhhHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhhhc
Q 028059           48 LFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLY   93 (214)
Q Consensus        48 ~~llgdl~hl~s~~iLl~KI~~~kS~~GlSlkTQ~Ly~lVf~~R~~   93 (214)
                      +-..+-..-+.+.+-=++|.+|+||+.|+|..+..+..+..+.+..
T Consensus         5 ~g~i~~~~~~~~~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~   50 (61)
T PF04193_consen    5 LGIISIVLWIISFLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVL   50 (61)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHccccccccHHHHHHHHHHHHHHHH
Confidence            3345556666777777899999999999999999988887776643

>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

Probab=85.66  E-value=0.64  Score=27.88  Aligned_cols=22  Identities=32%  Similarity=0.249  Sum_probs=18.4

Q ss_pred             HHHHhhccccccccchhhHHHH
Q 028059           64 IYKLMKEKTCAGLSLKSQELTA   85 (214)
Q Consensus        64 l~KI~~~kS~~GlSlkTQ~Ly~   85 (214)
                      +.|++|+||+.|+|.-+..+-.
T Consensus         7 i~~~~~~ks~~glS~~~~~l~~   28 (32)
T smart00679        7 IIKNYRRKSTEGLSILFVLLWL   28 (32)
T ss_pred             HHHHHHcCCcCcCCHHHHHHHH
Confidence            6899999999999987776544

Function unknown, but likely to be associated with the glycosylation machinery.

>PHA02246 hypothetical protein

Probab=85.58  E-value=16  Score=31.15  Aligned_cols=133  Identities=18%  Similarity=0.263  Sum_probs=68.5

Q ss_pred             HHHHHHHHHhhccccccccchhhHHHHHHHhhhh--cccceechhHHHHHHHHHHHHHHHHHHHHhcccccccccccccc
Q 028059           59 GISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRL--YCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNF  136 (214)
Q Consensus        59 s~~iLl~KI~~~kS~~GlSlkTQ~Ly~lVf~~R~--~~~~~~~y~~~t~~k~~~l~~s~~iiyli~~~~k~Tyd~~~Dtf  136 (214)
                      |..--+..+.+.||..|+|  .-.-|++++....  ......+..-.++..+ -+-..+.++.+.-..|     |.+|-|
T Consensus        19 gYipgL~slvk~~nv~GvS--~~FWYLi~~tvgiSfyNlL~T~~~~fqi~sv-g~nl~lgivcLlv~~~-----rkkd~f   90 (192)
T PHA02246         19 GYIPGLVALVKAESVKGVS--NYFWYLIVATVGISFYNLLLTDASVFQIVSV-GLNLTLGIVCLLVASY-----RKKDYF   90 (192)
T ss_pred             hhhhhHHHHhhhcccccHH--HHHHHHHHHHHHHHHHHHHhcCCceEEEeee-ehhhhhhhhheeeehh-----hccccc
Confidence            3344457788999999998  4566777775542  1111111000011000 0011111222222222     346767


Q ss_pred             cchhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhhhhHHHHHHhcCCccchHHHHHHHHHHHHH
Q 028059          137 AIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARF  206 (214)
Q Consensus       137 ~~~~liip~~vLali~~p~~~~~~~~eilWtFSiyLEsvAILPQL~mlqk~g~vE~lTshYv~~LG~yR~  206 (214)
                      ...++++-++.+-.+-    +   ..|+.-+.+.----.|-.||...+.|++..|....-.-..+|..=+
T Consensus        91 ~~~fiiifSLllfll~----~---~~evtQtVat~tIiLaYi~QIIqfyKTK~SEg~n~~l~lii~~GL~  153 (192)
T PHA02246         91 SIPFIIVFSLLLFLLS----D---FTALTQTVATITIILAYVTQITTFYKTKSAEGTNRFLFLIIGLGLA  153 (192)
T ss_pred             cchHHHHHHHHHHHHh----h---hHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCChhHHHHHHHHHH
Confidence            6666665444433321    1   2344444444444568899999999999888776655444554433

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00