Citrus Sinensis ID: 028126

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210---
Protein Sequence
MAEEVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLEVLNFLLIFKCLIIYSLVLTLNSHINRSLTPICQITHSRIFGGNFQLLVPCSLGITLLNLA
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEcccccccEEEcccccccccEEEcccccEEEEEEcccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHccccEEEEEEEEEEEHHEEHHHHHHHHHHEEEHHHcccccccccEEEEcccEEcccEEEEEEcccccEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccEEEEcccccccEEEEEccccccccEEcccccEEEEEccHEEEHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccEEEEEEEEEEccccccccccccEEEEEEEEEccccccEEEEEEEccEEEEHHccc
Coil and Loop (DISEMBL)
maeevelnpkqKKEIAKWFLLNSPAGEIQYVAKDLRLVLndnevydeavsesfpiynkshmiclqmpagagdVLVTSfgelgeneyldprtAQVAIVDHVKQVGAHYfeegnvqldakhecgdstlfqspddsaiSISNILRHHETEYLASLEVLNFLLIFKCLIIYSLVLTLNshinrsltpicqithsrifggnfqllvpcslgitllnla
Flexible Loop (DISEMBL)
maeevelnpkqkKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLEVLNFLLIFKCLIIYSLVLTLNSHINRSLTPICQITHSRIFGGNFQLLVPCSLGITLLNLA
Low Complexity Region (SEG)
MAEEVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLEVLNFLLIFKCLIIYSLVLTLNSHINRSLTPICQITHSRIFGGNFQLLVPCSLGITLLNLA
Disordered region (IsUnstruct)
**************IAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAHYFEEGNVQLDAKHECGDSTLFQ***DSAISISNILRHHETEYLASLEVLNFLLIFKCLIIYSLVLTLNSHINRSLTPICQITHSRIFGGNFQLLVPCSLGITLLN**
Disordered Region (DISOPRED)
**********QKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVG*************KHECGDSTLFQSPDDSAISISNILRHHETEYLASLEVLNFLLIFKCLIIYSLVLTLNSHINRSLTPICQITHSRIFGGNFQLLVPCSLGITLLNLA
Disordered Region (DISEMBL)
**********QKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLEVLNFLLIFKCLIIYSLVLTLNSHINRSLTPICQITHSRIFGGNFQLLVPCSLGITLLNLA
Disordered Region (DISPRO)
*****ELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLEVLNFLLIFKCLIIYSLVLTLNSHINRSLTPICQITHSRIFGGNFQLLVPCSLGITLLNLA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEEVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLEVLNFLLIFKCLIIYSLVLTLNSHINRSLTPICQITHSRIFGGNFQLLVPCSLGITLLNLA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	213	2.2.26 [Sep-21-2011]
O82631	308	F-actin-capping protein s	no	no	0.436	0.301	0.763	2e-39
P13022	281	F-actin-capping protein s	yes	no	0.474	0.359	0.365	1e-11
Q9W2N0	286	F-actin-capping protein s	yes	no	0.568	0.423	0.258	2e-08
A4FUA8	286	F-actin-capping protein s	yes	no	0.577	0.430	0.306	2e-06
P52907	286	F-actin-capping protein s	yes	no	0.563	0.419	0.305	4e-06
Q5NVM0	286	F-actin-capping protein s	yes	no	0.563	0.419	0.305	4e-06
Q2QLB9	286	F-actin-capping protein s	N/A	no	0.450	0.335	0.303	5e-06
Q09YH6	286	F-actin-capping protein s	N/A	no	0.450	0.335	0.303	6e-06
Q2QLG4	286	F-actin-capping protein s	yes	no	0.450	0.335	0.303	6e-06
Q09YL0	286	F-actin-capping protein s	N/A	no	0.450	0.335	0.303	6e-06

>sp|O82631|CAPZA_ARATH F-actin-capping protein subunit alpha OS=Arabidopsis thaliana GN=At3g05520 PE=2 SV=2

 Score =  162 bits (409), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 71/93 (76%), Positives = 85/93 (91%)

Query: 11  QKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGA 70
           QKKEIAKWF LN+PAGEI YVAKDL+ VL+D EVY+EA  E+FP+YNK+HMICL+MP+GA
Sbjct: 17  QKKEIAKWFFLNAPAGEINYVAKDLKAVLSDEEVYNEAAMEAFPVYNKTHMICLEMPSGA 76

Query: 71  GDVLVTSFGELGENEYLDPRTAQVAIVDHVKQV 103
           GDV+V+S+ E+ ENEYLDPRTAQVAIVDHVKQ+
Sbjct: 77  GDVIVSSYSEINENEYLDPRTAQVAIVDHVKQI 109

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
Arabidopsis thaliana (taxid: 3702)

>sp|P13022|CAPZA_DICDI F-actin-capping protein subunit alpha OS=Dictyostelium discoideum GN=acpB PE=1 SV=1

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 3/104 (2%)

Query: 14  EIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDV 73
           +IA  FLLN+P  E   V  D+R +L    + + +   +F  YN S M+ +Q   G+   
Sbjct: 9   QIATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQTSKGSA-- 66

Query: 74  LVTSFGELGENEYLDPRTAQVAIVDHVKQ-VGAHYFEEGNVQLD 116
           L+T  GE+  NEYLDP+  QV   DH+KQ V       G ++ D
Sbjct: 67  LITKEGEISNNEYLDPKNKQVITYDHIKQEVTGERSASGEIEQD 110

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9W2N0|CAPZA_DROME F-actin-capping protein subunit alpha OS=Drosophila melanogaster GN=cpa PE=2 SV=1

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)

Query: 3   EEVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMI 62
           E+  +   +K  I   F+L++P GE   V  D+R +L ++ +  +  S +F  YNK  + 
Sbjct: 2   EQTPITDAEKVRIVSDFILHAPPGEFNEVFNDVRELLKNDTLLKDGASHAFAQYNKDQLT 61

Query: 63  CLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAHYFEEGNVQLDAKHECG 122
            +++     + +++   +LG   + DPRT Q    DH+++  + Y    +V+ DA  E  
Sbjct: 62  PVRIEGTDHNAIISEHNDLGNGRFYDPRTKQAFKYDHLRKEASDY---QDVEADATAEPW 118

Query: 123 DSTL 126
            + L
Sbjct: 119 RAAL 122

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Drosophila melanogaster (taxid: 7227)

>sp|A4FUA8|CAZA1_BOVIN F-actin-capping protein subunit alpha-1 OS=Bos taurus GN=CAPZA1 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)

Query: 4   EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
           E  ++ ++K  IA  F+ ++P GE   V  D+RL+LN++ +  E  + +F  YN      
Sbjct: 5   EDRVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTP 64

Query: 64  LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHV-KQVGAHYFEEGNVQLDAKHECG 122
           +++      VL+T  G+LG + +LDPR       DH+ K+      EE +  L +  E  
Sbjct: 65  VKIEGYEDQVLITEHGDLGNSRFLDPRNKISFKFDHLRKEASDPQPEEADGGLKSWRESC 124

Query: 123 DSTL 126
           DS L
Sbjct: 125 DSAL 128

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Bos taurus (taxid: 9913)

>sp|P52907|CAZA1_HUMAN F-actin-capping protein subunit alpha-1 OS=Homo sapiens GN=CAPZA1 PE=1 SV=3

 Score = 51.6 bits (122), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 7   LNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQM 66
           ++ ++K  IA  F+ ++P GE   V  D+RL+LN++ +  E  + +F  YN      +++
Sbjct: 8   VSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKI 67

Query: 67  PAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHV-KQVGAHYFEEGNVQLDAKHECGDST 125
                 VL+T  G+LG + +LDPR       DH+ K+      EE +  L +  E  DS 
Sbjct: 68  EGYEDQVLITEHGDLGNSRFLDPRNKISFKFDHLRKEASDPQPEEADGGLKSWRESCDSA 127

Query: 126 L 126
           L
Sbjct: 128 L 128

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Homo sapiens (taxid: 9606)

>sp|Q5NVM0|CAZA1_PONAB F-actin-capping protein subunit alpha-1 OS=Pongo abelii GN=CAPZA1 PE=2 SV=3

 Score = 51.6 bits (122), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 7   LNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQM 66
           ++ ++K  IA  F+ ++P GE   V  D+RL+LN++ +  E  + +F +YN      +++
Sbjct: 8   VSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFALYNMDQFTPVKI 67

Query: 67  PAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHV-KQVGAHYFEEGNVQLDAKHECGDST 125
                 VL+T  G+LG + +LDPR       DH+ K+      EE +  L +  E  DS 
Sbjct: 68  EGYEDQVLITEHGDLGNSRFLDPRNKISFKFDHLRKEASDPQPEEVDGGLKSWRESCDSA 127

Query: 126 L 126
           L
Sbjct: 128 L 128

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Pongo abelii (taxid: 9601)

>sp|Q2QLB9|CAZA2_CALMO F-actin-capping protein subunit alpha-2 OS=Callicebus moloch GN=CAPZA2 PE=3 SV=3

 Score = 51.2 bits (121), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 56/99 (56%)

Query: 4   EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
           E +L+ ++K  IA  F++++P GE   V  D+RL+LN++ +  E  + +F  YN      
Sbjct: 5   EEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTP 64

Query: 64  LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
           +++      VL+T  G+LG  ++LDP+       DH+++
Sbjct: 65  VKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRK 103

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Callicebus moloch (taxid: 9523)

>sp|Q09YH6|CAZA2_SAIBB F-actin-capping protein subunit alpha-2 OS=Saimiri boliviensis boliviensis GN=CAPZA2 PE=3 SV=3

 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 56/99 (56%)

Query: 4   EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
           E +L+ ++K  IA  F++++P GE   V  D+RL+LN++ +  E  + +F  YN      
Sbjct: 5   EEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTP 64

Query: 64  LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
           +++      VL+T  G+LG  ++LDP+       DH+++
Sbjct: 65  VKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRK 103

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Saimiri boliviensis boliviensis (taxid: 39432)

>sp|Q2QLG4|CAZA2_CALJA F-actin-capping protein subunit alpha-2 OS=Callithrix jacchus GN=CAPZA2 PE=3 SV=3

 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 56/99 (56%)

Query: 4   EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
           E +L+ ++K  IA  F++++P GE   V  D+RL+LN++ +  E  + +F  YN      
Sbjct: 5   EEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTP 64

Query: 64  LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
           +++      VL+T  G+LG  ++LDP+       DH+++
Sbjct: 65  VKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRK 103

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Callithrix jacchus (taxid: 9483)

>sp|Q09YL0|CAZA2_ATEGE F-actin-capping protein subunit alpha-2 OS=Ateles geoffroyi GN=CAPZA2 PE=3 SV=3

 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 56/99 (56%)

Query: 4   EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
           E +L+ ++K  IA  F++++P GE   V  D+RL+LN++ +  E  + +F  YN      
Sbjct: 5   EEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTP 64

Query: 64  LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
           +++      VL+T  G+LG  ++LDP+       DH+++
Sbjct: 65  VKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRK 103

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Ateles geoffroyi (taxid: 9509)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	213
414591165	252	TPA: hypothetical protein ZEAMMB73_87093	0.690	0.583	0.456	6e-41
224125170	303	predicted protein [Populus trichocarpa]	0.544	0.382	0.664	2e-40
147786912	307	hypothetical protein VITISV_026036 [Viti	0.469	0.325	0.79	3e-40
359487634	370	PREDICTED: F-actin-capping protein subun	0.469	0.270	0.79	3e-40
296089696	296	unnamed protein product [Vitis vinifera]	0.455	0.327	0.783	1e-38
224123604	303	predicted protein [Populus trichocarpa]	0.553	0.389	0.641	2e-38
255542738	308	f-actin capping protein alpha, putative	0.539	0.373	0.645	2e-38
297829078	308	alpha subunit of F-actin capping protein	0.539	0.373	0.629	3e-38
238479664	382	F-actin-capping protein subunit alpha [A	0.507	0.282	0.641	5e-38
3702368	308	alpha subunit of F-actin capping protein	0.779	0.538	0.481	8e-38

>gi|414591165|tpg|DAA41736.1| TPA: hypothetical protein ZEAMMB73_870930 [Zea mays]

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 121/195 (62%), Gaps = 48/195 (24%)

Query: 7   LNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQM 66
           L+  QK+EIA WFL N+PAGEI YVAKD+R +L D+ VY+ A +E+FP YNK+ ++ L++
Sbjct: 11  LSDSQKREIAVWFLSNAPAGEIHYVAKDVRALLGDDAVYEAAAAEAFPEYNKARLVSLEL 70

Query: 67  PAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVK------------------------- 101
           P  +GD+++T++GE+ +N YLDPRTAQVA +DH+K                         
Sbjct: 71  PDRSGDIIITAYGEIDKNNYLDPRTAQVASIDHMKQTCTKLRPAEDEELPSAYIEEFSNG 130

Query: 102 -----------------------QVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISIS 138
                                  QV AHYFEEGNVQLD   +  DST+ QSPDD A+SI+
Sbjct: 131 SWRSIWTMEFNYELQFVDIKGNIQVDAHYFEEGNVQLDTNIDRKDSTIMQSPDDCAVSIT 190

Query: 139 NILRHHETEYLASLE 153
           +I+RHHE+EYL+SLE
Sbjct: 191 SIIRHHESEYLSSLE 205

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125170|ref|XP_002319517.1| predicted protein [Populus trichocarpa] gi|222857893|gb|EEE95440.1| predicted protein [Populus trichocarpa]

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/128 (66%), Positives = 99/128 (77%), Gaps = 12/128 (9%)

Query: 3   EEVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMI 62
           EE ELN KQK+EIAKWFLLNSPAGEIQY+AKDLR VLND +VY+EA SE+FP+YNKSH+I
Sbjct: 4   EECELNEKQKREIAKWFLLNSPAGEIQYIAKDLRSVLNDEKVYNEAASEAFPLYNKSHLI 63

Query: 63  CLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQV------------GAHYFEE 110
           CL++P  +GDVLVTS+ EL ENE+LDPRTAQVA VDHVKQV             + Y EE
Sbjct: 64  CLELPNRSGDVLVTSYNELEENEFLDPRTAQVATVDHVKQVCTDVRPAADEELSSPYIEE 123

Query: 111 GNVQLDAK 118
               LDA+
Sbjct: 124 FRCALDAE 131

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147786912|emb|CAN68894.1| hypothetical protein VITISV_026036 [Vitis vinifera]

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 79/100 (79%), Positives = 90/100 (90%)

Query: 4   EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
           EVE++ +QKKEIAKWFLLNSPAGEIQYVAKDLR VL+D +VY+EA SE+FP+YNKSHMIC
Sbjct: 9   EVEMSDEQKKEIAKWFLLNSPAGEIQYVAKDLRSVLSDEDVYNEAASEAFPLYNKSHMIC 68

Query: 64  LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQV 103
           L+MP   GDVLVTSF EL +NEYLDPRTA VAI+DHVKQV
Sbjct: 69  LEMPGTTGDVLVTSFSELDKNEYLDPRTAHVAIIDHVKQV 108

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487634|ref|XP_002283779.2| PREDICTED: F-actin-capping protein subunit alpha-like [Vitis vinifera]

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 79/100 (79%), Positives = 90/100 (90%)

Query: 4   EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
           EVE++ +QKKEIAKWFLLNSPAGEIQYVAKDLR VL+D +VY+EA SE+FP+YNKSHMIC
Sbjct: 9   EVEMSDEQKKEIAKWFLLNSPAGEIQYVAKDLRSVLSDEDVYNEAASEAFPLYNKSHMIC 68

Query: 64  LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQV 103
           L+MP   GDVLVTSF EL +NEYLDPRTA VAI+DHVKQV
Sbjct: 69  LEMPGTTGDVLVTSFSELDKNEYLDPRTAHVAIIDHVKQV 108

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089696|emb|CBI39515.3| unnamed protein product [Vitis vinifera]

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 76/97 (78%), Positives = 87/97 (89%)

Query: 7   LNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQM 66
           ++ +QKKEIAKWFLLNSPAGEIQYVAKDLR VL+D +VY+EA SE+FP+YNKSHMICL+M
Sbjct: 1   MSDEQKKEIAKWFLLNSPAGEIQYVAKDLRSVLSDEDVYNEAASEAFPLYNKSHMICLEM 60

Query: 67  PAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQV 103
           P   GDVLVTSF EL +NEYLDPRTA VAI+DHVKQV
Sbjct: 61  PGTTGDVLVTSFSELDKNEYLDPRTAHVAIIDHVKQV 97

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123604|ref|XP_002330162.1| predicted protein [Populus trichocarpa] gi|222871618|gb|EEF08749.1| predicted protein [Populus trichocarpa]

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/131 (64%), Positives = 99/131 (75%), Gaps = 13/131 (9%)

Query: 1   MAEE-VELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKS 59
           MAEE  ELN K+K+EIAKWFLLNSPAGEIQY+AKDLR VLND + Y+EA  E+FP+YNKS
Sbjct: 1   MAEEDCELNEKRKREIAKWFLLNSPAGEIQYIAKDLRSVLNDEKAYNEAALEAFPLYNKS 60

Query: 60  HMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQV------------GAHY 107
           H ICL++P  +G+VLVTS+ EL ENE+LDPRTAQVAIVDHVKQV             + Y
Sbjct: 61  HFICLELPDRSGEVLVTSYNELDENEFLDPRTAQVAIVDHVKQVCTDMRPTADEELSSPY 120

Query: 108 FEEGNVQLDAK 118
            EE    LDA+
Sbjct: 121 IEEFRCALDAE 131

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542738|ref|XP_002512432.1| f-actin capping protein alpha, putative [Ricinus communis] gi|223548393|gb|EEF49884.1| f-actin capping protein alpha, putative [Ricinus communis]

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/127 (64%), Positives = 97/127 (76%), Gaps = 12/127 (9%)

Query: 4   EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
           +VEL+ KQKKEIAKWFLLNSPAGEIQ+VAKDLR VLND  VY+EA  ++FP+YNKSHM+C
Sbjct: 10  DVELSDKQKKEIAKWFLLNSPAGEIQFVAKDLRSVLNDERVYNEAAGDAFPLYNKSHMVC 69

Query: 64  LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQV------------GAHYFEEG 111
           L+ P  +GDVLVTS+ EL +NEYLDPRTAQVAIV+HVKQV             + Y EE 
Sbjct: 70  LEFPDRSGDVLVTSYNELNKNEYLDPRTAQVAIVNHVKQVCTVVRPATDEELPSPYIEEF 129

Query: 112 NVQLDAK 118
              LDA+
Sbjct: 130 RCSLDAE 136

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829078|ref|XP_002882421.1| alpha subunit of F-actin capping protein [Arabidopsis lyrata subsp. lyrata] gi|297328261|gb|EFH58680.1| alpha subunit of F-actin capping protein [Arabidopsis lyrata subsp. lyrata]

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 80/127 (62%), Positives = 96/127 (75%), Gaps = 12/127 (9%)

Query: 4   EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
           E EL+  Q+KEIAKWFLLN+PAGEI YVAKDL+ VL+D EVY+EA  E+FP+YNKSHMIC
Sbjct: 10  ETELSYDQRKEIAKWFLLNAPAGEINYVAKDLKAVLSDEEVYNEAAMEAFPVYNKSHMIC 69

Query: 64  LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAH------------YFEEG 111
           L+MP+ AGDV+V+S+ E+ ENEYLDPRTAQVAIVDHVKQ+               Y EE 
Sbjct: 70  LEMPSRAGDVIVSSYSEITENEYLDPRTAQVAIVDHVKQICTKVRPANDEELPSLYIEEY 129

Query: 112 NVQLDAK 118
              LDA+
Sbjct: 130 RYALDAE 136

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|238479664|ref|NP_001154593.1| F-actin-capping protein subunit alpha [Arabidopsis thaliana] gi|332640732|gb|AEE74253.1| F-actin-capping protein subunit alpha [Arabidopsis thaliana]

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 77/120 (64%), Positives = 92/120 (76%), Gaps = 12/120 (10%)

Query: 11  QKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGA 70
           QKKEIAKWF LN+PAGEI YVAKDL+ VL+D EVY+EA  E+FP+YNK+HMICL+MP+GA
Sbjct: 17  QKKEIAKWFFLNAPAGEINYVAKDLKAVLSDEEVYNEAAMEAFPVYNKTHMICLEMPSGA 76

Query: 71  GDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAH------------YFEEGNVQLDAK 118
           GDV+V+S+ E+ ENEYLDPRTAQVAIVDHVKQ+               Y EE    LDA+
Sbjct: 77  GDVIVSSYSEINENEYLDPRTAQVAIVDHVKQICTKVRPANDEELPSLYIEEYRYALDAE 136

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3702368|emb|CAA05054.1| alpha subunit of F-actin capping protein [Arabidopsis thaliana]

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/189 (48%), Positives = 120/189 (63%), Gaps = 23/189 (12%)

Query: 11  QKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGA 70
           QKKEIAKWF LN+PAGEI YVAKDL+ VL+D EVY+EA  E+FP+YNK+HMICL+MP+GA
Sbjct: 17  QKKEIAKWFFLNAPAGEINYVAKDLKAVLSDEEVYNEAAMEAFPVYNKTHMICLEMPSGA 76

Query: 71  GDVLVTSFGELGENEYLDPRTAQVAIVDHVKQVGAH------------YFEEGNVQLDAK 118
           GDV+V+S+ E+ ENEYLDPRTAQVAIVDHVKQ+               Y EE    LDA+
Sbjct: 77  GDVIVSSYSEINENEYLDPRTAQVAIVDHVKQICTKVRPANDEELPSLYIEEYRYALDAE 136

Query: 119 HECGDSTLFQSPDDSAISISNILRHHETEYLASLEVLNFLLIFKCLIIYSLVLTLNSHIN 178
            +   S  +       +S  N ++  +TE   S    +F L+   +II ++ L+  +  N
Sbjct: 137 IQRYVSESYP----KGMSAVNCVKGKDTEGPGS----DFELV---VIITAMRLSPQNFCN 185

Query: 179 RSLTPICQI 187
            S   +  I
Sbjct: 186 GSWRSVWNI 194

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	213
TAIR|locus:2079757	382	CPA "capping protein A" [Arabi	0.469	0.261	0.74	9.9e-60
MGI|MGI:106222	286	Capza2 "capping protein (actin	0.478	0.356	0.310	1.4e-15
RGD|1549770	286	Capza2 "capping protein (actin	0.478	0.356	0.310	1.4e-15
DICTYBASE|DDB_G0272104	281	acpB "F-actin-capping protein	0.474	0.359	0.365	1.1e-12
RGD|1563947	300	RGD1563947 "similar to RIKEN c	0.469	0.333	0.29	5.7e-12
ZFIN|ZDB-GENE-030131-5237	286	capza1a "capping protein (acti	0.591	0.440	0.304	1.7e-11
UNIPROTKB|B4DG50	172	CAPZA2 "cDNA FLJ51827, highly	0.478	0.593	0.310	4.5e-11
UNIPROTKB|C9JUG7	146	CAPZA2 "F-actin-capping protei	0.478	0.698	0.310	4.5e-11
UNIPROTKB|F8W9N7	174	CAPZA2 "F-actin-capping protei	0.478	0.586	0.310	4.5e-11
UNIPROTKB|A4FUA8	286	CAPZA1 "F-actin-capping protei	0.591	0.440	0.312	1.2e-10

TAIR|locus:2079757 CPA "capping protein A" [Arabidopsis thaliana (taxid:3702)]

 Score = 408 (148.7 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
 Identities = 74/100 (74%), Positives = 89/100 (89%)

Query:     4 EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
             E EL+  QKKEIAKWF LN+PAGEI YVAKDL+ VL+D EVY+EA  E+FP+YNK+HMIC
Sbjct:    10 ETELSYDQKKEIAKWFFLNAPAGEINYVAKDLKAVLSDEEVYNEAAMEAFPVYNKTHMIC 69

Query:    64 LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQV 103
             L+MP+GAGDV+V+S+ E+ ENEYLDPRTAQVAIVDHVKQ+
Sbjct:    70 LEMPSGAGDVIVSSYSEINENEYLDPRTAQVAIVDHVKQI 109

GO:0003779 "actin binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008290 "F-actin capping protein complex" evidence=IEA;ISS

GO:0030036 "actin cytoskeleton organization" evidence=ISS;IMP

GO:0005634 "nucleus" evidence=IDA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0051645 "Golgi localization" evidence=RCA

GO:0051646 "mitochondrion localization" evidence=RCA

GO:0060151 "peroxisome localization" evidence=RCA

GO:0007015 "actin filament organization" evidence=IMP

GO:0051693 "actin filament capping" evidence=IMP

MGI|MGI:106222 Capza2 "capping protein (actin filament) muscle Z-line, alpha 2" [Mus musculus (taxid:10090)]

 Score = 153 (58.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
 Identities = 32/103 (31%), Positives = 59/103 (57%)

Query:     1 MAE-EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKS 59
             MA+ E +L+ ++K  IA  F++++P GE   V  D+RL+LN++ +  E  + +F  YN  
Sbjct:     1 MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLD 60

Query:    60 HMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
                 +++      VL+T  G+LG  ++LDP+       DH+++
Sbjct:    61 QFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRK 103

GO:0003779 "actin binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0008150 "biological_process" evidence=ND

GO:0008290 "F-actin capping protein complex" evidence=IPI

GO:0016020 "membrane" evidence=IDA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IDA

GO:0051693 "actin filament capping" evidence=IEA

RGD|1549770 Capza2 "capping protein (actin filament) muscle Z-line, alpha 2" [Rattus norvegicus (taxid:10116)]

 Score = 153 (58.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
 Identities = 32/103 (31%), Positives = 59/103 (57%)

Query:     1 MAE-EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKS 59
             MA+ E +L+ ++K  IA  F++++P GE   V  D+RL+LN++ +  E  + +F  YN  
Sbjct:     1 MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLD 60

Query:    60 HMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
                 +++      VL+T  G+LG  ++LDP+       DH+++
Sbjct:    61 QFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRK 103

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0008290 "F-actin capping protein complex" evidence=IEA;ISO

GO:0016020 "membrane" evidence=IEA;ISO

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA;ISO

GO:0051693 "actin filament capping" evidence=IEA

DICTYBASE|DDB_G0272104 acpB "F-actin-capping protein subunit alpha" [Dictyostelium discoideum (taxid:44689)]

 Score = 170 (64.9 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 38/104 (36%), Positives = 54/104 (51%)

Query:    14 EIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDV 73
             +IA  FLLN+P  E   V  D+R +L    + + +   +F  YN S M+ +Q     G  
Sbjct:     9 QIATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQ--TSKGSA 66

Query:    74 LVTSFGELGENEYLDPRTAQVAIVDHVKQ-VGAHYFEEGNVQLD 116
             L+T  GE+  NEYLDP+  QV   DH+KQ V       G ++ D
Sbjct:    67 LITKEGEISNNEYLDPKNKQVITYDHIKQEVTGERSASGEIEQD 110

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0009617 "response to bacterium" evidence=IEP

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0051693 "actin filament capping" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

RGD|1563947 RGD1563947 "similar to RIKEN cDNA 4933400A11" [Rattus norvegicus (taxid:10116)]

 Score = 139 (54.0 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
 Identities = 29/100 (29%), Positives = 56/100 (56%)

Query:     4 EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
             +V  + ++K  +A  F+  +P GE + V  D+RL++N++++  + + ++   YN    I 
Sbjct:     5 KVRASDEKKVYLASKFITQAPPGEFKEVFCDIRLLVNNDDLLRKRMGQAIAQYNMDQFIP 64

Query:    64 LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQV 103
             +++      VLVT  G LG N +LDPR       DH++++
Sbjct:    65 VKLEGYDDHVLVTEHGYLGNNRFLDPRNRISFKFDHLRKI 104

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

ZFIN|ZDB-GENE-030131-5237 capza1a "capping protein (actin filament) muscle Z-line, alpha 1a" [Danio rerio (taxid:7955)]

 Score = 160 (61.4 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 39/128 (30%), Positives = 62/128 (48%)

Query:     1 MAE-EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKS 59
             MA+ E +L+  +K  IA  F++++P GE   V  D+RL+LN++ +  E  + +F  YN  
Sbjct:     1 MADFEEQLSDDEKVRIAANFVIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMG 60

Query:    60 HMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHV-KQVGAHYFEEGNVQLDAK 118
                  ++      VL+T  G+LG   + DPR  Q    DH+ K+       EG   L   
Sbjct:    61 QFTPAKLDGSEDQVLITEHGDLGHGRFFDPRKKQSFKFDHLRKEASEAQSYEGEAALRPW 120

Query:   119 HECGDSTL 126
              +  D  L
Sbjct:   121 RDAVDEAL 128

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030018 "Z disc" evidence=IDA

UNIPROTKB|B4DG50 CAPZA2 "cDNA FLJ51827, highly similar to F-actin capping protein alpha-2 subunit" [Homo sapiens (taxid:9606)]

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 32/103 (31%), Positives = 59/103 (57%)

Query:     1 MAE-EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKS 59
             MA+ E +L+ ++K  IA  F++++P GE   V  D+RL+LN++ +  E  + +F  YN  
Sbjct:     1 MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLD 60

Query:    60 HMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
                 +++      VL+T  G+LG  ++LDP+       DH+++
Sbjct:    61 QFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRK 103

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|C9JUG7 CAPZA2 "F-actin-capping protein subunit alpha-2" [Homo sapiens (taxid:9606)]

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 32/103 (31%), Positives = 59/103 (57%)

Query:     1 MAE-EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKS 59
             MA+ E +L+ ++K  IA  F++++P GE   V  D+RL+LN++ +  E  + +F  YN  
Sbjct:     1 MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLD 60

Query:    60 HMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
                 +++      VL+T  G+LG  ++LDP+       DH+++
Sbjct:    61 QFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRK 103

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|F8W9N7 CAPZA2 "F-actin-capping protein subunit alpha-2" [Homo sapiens (taxid:9606)]

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 32/103 (31%), Positives = 59/103 (57%)

Query:     1 MAE-EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKS 59
             MA+ E +L+ ++K  IA  F++++P GE   V  D+RL+LN++ +  E  + +F  YN  
Sbjct:     1 MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLD 60

Query:    60 HMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
                 +++      VL+T  G+LG  ++LDP+       DH+++
Sbjct:    61 QFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRK 103

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|A4FUA8 CAPZA1 "F-actin-capping protein subunit alpha-1" [Bos taurus (taxid:9913)]

 Score = 155 (59.6 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 40/128 (31%), Positives = 66/128 (51%)

Query:     1 MAE-EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKS 59
             MA+ E  ++ ++K  IA  F+ ++P GE   V  D+RL+LN++ +  E  + +F  YN  
Sbjct:     1 MADFEDRVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMD 60

Query:    60 HMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHV-KQVGAHYFEEGNVQLDAK 118
                 +++      VL+T  G+LG + +LDPR       DH+ K+      EE +  L + 
Sbjct:    61 QFTPVKIEGYEDQVLITEHGDLGNSRFLDPRNKISFKFDHLRKEASDPQPEEADGGLKSW 120

Query:   119 HECGDSTL 126
              E  DS L
Sbjct:   121 RESCDSAL 128

GO:0071203 "WASH complex" evidence=ISS

GO:0051693 "actin filament capping" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_XIII0081	hypothetical protein (304 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pm.C_LG_V0447	hypothetical protein (258 aa)				•	•	•	•		0.857

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	213
pfam01267	269	pfam01267, F-actin_cap_A, F-actin capping protein	5e-27
pfam01267	269	pfam01267, F-actin_cap_A, F-actin capping protein	4e-11

>gnl|CDD|216401 pfam01267, F-actin_cap_A, F-actin capping protein alpha subunit

 Score =  103 bits (259), Expect = 5e-27
 Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 11  QKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGA 70
           +K EI   F+ N+P GE+  V  DLR +L D+ +    ++E+   YN+  ++ +++P G+
Sbjct: 1   EKIEIISSFIKNAPPGELNDVVADLRALLGDDPLIKSTIAEALEQYNEEQLVPVKLP-GS 59

Query: 71  GDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
             V+++ + +LG N Y DP + +   VDH+KQ
Sbjct: 60  EKVIISEYNKLGGNRYFDPVSKKSFTVDHLKQ 91

Length = 269

>gnl|CDD|216401 pfam01267, F-actin_cap_A, F-actin capping protein alpha subunit

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 19/52 (36%), Positives = 30/52 (57%)

Query: 102 QVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLE 153
           +V  HY+E+GNVQL +  +  ++    + D +A SI   +R  E EY A+L 
Sbjct: 180 KVDVHYYEDGNVQLKSSKDFEETVSVSNDDATASSIVKAIREAENEYQAALN 231

Length = 269

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	213
KOG0836	282	consensus F-actin capping protein, alpha subunit [	100.0
PF01267	271	F-actin_cap_A: F-actin capping protein alpha subun	100.0

>KOG0836 consensus F-actin capping protein, alpha subunit [Cytoskeleton]

Probab=100.00  E-value=3e-57  Score=399.07  Aligned_cols=167  Identities=34%  Similarity=0.544  Sum_probs=163.3

Q ss_pred             CCCCHHHHHHHHHHHhhcCCCCcHHHHHHHHHHhhCCCccchHHHhhhHHHHhhhCceeeEcCCCCCeeEEeeccccCCC
Q 028126            5 VELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGEN   84 (213)
Q Consensus         5 ~~mS~~ek~~Ii~~fI~~APPGE~neV~~DLr~Ll~dd~~~~~~i~~a~~~YN~eq~~~V~l~g~~~~vIIS~~nkl~~~   84 (213)
                      .+||+++|++||++||++|||||||+|++|||.|+.+|.++++++.+||++||++||+||+++|..++||||+||+++++
T Consensus         2 ~~lS~~~k~rii~kfi~~APPGEfneVf~Dlr~ll~~d~l~~e~~~~A~~qYn~~~~vpv~i~g~~~~viIS~~n~lg~~   81 (282)
T KOG0836|consen    2 SELSDAEKVRIISKFILHAPPGEFNEVFNDLRLLLSNDELLKEAAHEAFAQYNVDQMVPVEIDGGANQVIISEYNDLGNN   81 (282)
T ss_pred             CcccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHhcchhHHHHHHHHHHHHhchhcceeEecCCCCCceEEecccccCcc
Confidence            47999999999999999999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             ceecCCCCeEEEEecccc--------------------------------------------------------------
Q 028126           85 EYLDPRTAQVAIVDHVKQ--------------------------------------------------------------  102 (213)
Q Consensus        85 ry~DP~sk~sF~~DHl~~--------------------------------------------------------------  102 (213)
                      |||||+++++|+|||+++                                                              
T Consensus        82 rf~Dp~~k~sFk~dhl~kea~d~qp~~~~~~~~E~~r~~l~~~l~~y~~~hy~~~~t~~vkk~dg~~~~l~icIesh~y~  161 (282)
T KOG0836|consen   82 RFLDPVNKKSFKYDHLRKEAEDVQPYEAEINIIEIWRYALDAQLKKYVSDHYPKGVTFVVKKSDGEQETLTICIESHQYQ  161 (282)
T ss_pred             eecchhhceeeeHHHHHHHhccCCCcchhhhhhHHHHHHHHHHHHHHHHhccCCCceEEEeccCCcceEEEEEEeecccC
Confidence            999999999999999988                                                              


Q ss_pred             ----------------------------eeeEEEeeeeEEEeecccccccccccCCCccHHHHHHHHHHHHHHHHHHHHH
Q 028126          103 ----------------------------VGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLEV  154 (213)
Q Consensus       103 ----------------------------V~VHYYEDGNVqL~ssK~v~~s~~~~~~~~~A~~IVk~I~~~En~yQ~~L~e  154 (213)
                                                  |||||||||||||.++|++.+++.++++.+.|+++++.|+++|++||+++++
T Consensus       162 pkNfwNG~WRS~w~~~v~~~~~l~G~i~vqvHYyEdGNV~l~s~Kd~qds~~vsn~~q~a~e~~~iI~~~Eneyq~ai~e  241 (282)
T KOG0836|consen  162 PKNFWNGRWRSEWNYDVQPTTELKGRIKVQVHYYEDGNVQLVSSKDIQDSLTVSNEVQTAKEFIKIIEEAENEYQAAISE  241 (282)
T ss_pred             cccccCCceeeeeeeccCchheeeeEEEEEEEEEecCcEEEEecCcchhhheeechHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                        8999999999999999999999999999999999999999999999999999


Q ss_pred             hcccc---cchhhhhhhhhh
Q 028126          155 LNFLL---IFKCLIIYSLVL  171 (213)
Q Consensus       155 ~f~~L---tFKaLRr~~~~~  171 (213)
                      +|++|   +||+|||+.-|-
T Consensus       242 ~yq~lsD~tFKaLRRqLPVT  261 (282)
T KOG0836|consen  242 NYQTLSDTTFKALRRQLPVT  261 (282)
T ss_pred             HHHhcChhHHHHHHhhCCce
Confidence            99999   999999998774

>PF01267 F-actin_cap_A: F-actin capping protein alpha subunit; InterPro: IPR002189 This entry represents a component of the WASH complex

Probab=100.00  E-value=1.3e-55  Score=392.08  Aligned_cols=160  Identities=35%  Similarity=0.590  Sum_probs=143.4

Q ss_pred             HHHHHHHHHhhcCCCCcHHHHHHHHHHhhCCCccchHHHhhhHHHHhhhCceeeEcCCCCCeeEEeeccccCCCceecCC
Q 028126           11 QKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENEYLDPR   90 (213)
Q Consensus        11 ek~~Ii~~fI~~APPGE~neV~~DLr~Ll~dd~~~~~~i~~a~~~YN~eq~~~V~l~g~~~~vIIS~~nkl~~~ry~DP~   90 (213)
                      ||++||++||++|||||+++|++|||.|++||.++++++++|+++||++||+||++||.+++||||+||+++++||+||+
T Consensus         1 ek~~ii~~fl~~aPPGE~~~V~~Dlr~l~~dd~~~~~~i~~a~~~yn~~q~~~v~~~~~~~~viis~~n~~~~~ry~Dp~   80 (271)
T PF01267_consen    1 EKVEIISSFLLQAPPGEFNEVFNDLRTLLGDDSLLKEGIAEAFEQYNEEQFIPVKLPGSDHKVIISKYNKLGGNRYFDPR   80 (271)
T ss_dssp             HHHHHHHHHHHT--TT-HHHHHHHHHHHHT-HHHHHHHSHHHHHHHHHHTTEEE--TTSSS-EEE-GGGBESTTEEEETT
T ss_pred             CHHHHHHHHHHcCCCccHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHCcEEEEeCCCCcceEEecccccCCCeEEEec
Confidence            68999999999999999999999999999999999999999999999999999999998889999999999999999999


Q ss_pred             CCeEEEEecccc--------------------------------------------------------------------
Q 028126           91 TAQVAIVDHVKQ--------------------------------------------------------------------  102 (213)
Q Consensus        91 sk~sF~~DHl~~--------------------------------------------------------------------  102 (213)
                      ++++|+|||+++                                                                    
T Consensus        81 ~~~~F~~DHl~~~~~d~e~~~~~~~~~e~~R~~l~~~l~~Yv~~hy~~g~~~V~~~~~~~~~~l~i~I~~~k~n~~Nfwn  160 (271)
T PF01267_consen   81 SKKSFSVDHLKQKASDVEPYEPPDEELESYRDALDKALEKYVKEHYPSGACGVYPKSEEDKETLVICIVAHKYNPKNFWN  160 (271)
T ss_dssp             TTEEEEEETTTTEEEEEEE-----TSSHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEETTEEEEEEEEEEEEEEGGGTEE
T ss_pred             cCcEEEEeeeccEEccCccccccccchHHHHHHHHHHHHHHHHHhccCceeEEEeccCCCccEEEEEEEecccccccccC
Confidence            999999999998                                                                    


Q ss_pred             ----------------------eeeEEEeeeeEEEeecccccccccccCCCccHHHHHHHHHHHHHHHHHHHHHhcccc-
Q 028126          103 ----------------------VGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLEVLNFLL-  159 (213)
Q Consensus       103 ----------------------V~VHYYEDGNVqL~ssK~v~~s~~~~~~~~~A~~IVk~I~~~En~yQ~~L~e~f~~L-  159 (213)
                                            |+|||||||||||+++|+++.++.++++.++|++||++|+++|++||++|+++|++| 
T Consensus       161 G~WrS~w~~~~~~~~~l~G~I~V~vHYyEdGNVqL~~~k~~~~~~~~~~~~~~a~~iv~~I~~~E~~~q~~L~e~~~~ls  240 (271)
T PF01267_consen  161 GRWRSEWTVDFSSSGTLSGKIKVQVHYYEDGNVQLNSSKEVSETVSVSNDEQFASDIVKAIKEAENKYQTSLNESYNNLS  240 (271)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEEEEEE-TTEEEEEEEEEEEEEEEE--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeEEEEEecCCCceEEEEEEeeEEEEeecEEEEEEccccceeeccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence                                  999999999999999999999998888788999999999999999999999999999 


Q ss_pred             --cchhhhhhhhh
Q 028126          160 --IFKCLIIYSLV  170 (213)
Q Consensus       160 --tFKaLRr~~~~  170 (213)
                        +||+|||+.-|
T Consensus       241 ~~tFK~LRR~LPV  253 (271)
T PF01267_consen  241 EKTFKALRRQLPV  253 (271)
T ss_dssp             HTHHHHHS-SS-T
T ss_pred             HHHHHHhhhhCCC
Confidence              99999999754

The WASH complex is present at the surface of endosomes and recruits and activates the Arp2/3 complex to induce actin polymerisation. The WASH complex plays a key role in the fission of tubules that serve as transport intermediates during endosome sorting []. The WASH complex's subunit structure: F-actin-capping protein subunit alpha (CAPZA1, CAPZA2 or CAPZA3), F-actin-capping protein subunit beta (CAPZB), WASH (WASH1, WASH2P, WASH3P, WASH4P, WASH5P or WASH6P), FAM21 (FAM21A, FAM21B or FAM21C), KIAA1033, KIAA0196 (strumpellin) and CCDC53. The actin filament system, a prominent part of the cytoskeleton in eukaryotic cells, is both a static structure and a dynamic network that can undergo rearrangements: it is thought to be involved in processes such as cell movement and phagocytosis [], as well as muscle contraction. The F-actin capping protein binds in a calcium-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike gelsolin and severin this protein does not sever actin filaments. The F-actin capping protein is a heterodimer composed of two unrelated subunits: alpha and beta (see IPR001698 from INTERPRO). Neither of the subunits shows sequence similarity to other filament-capping proteins []. The alpha subunit is a protein of about 268 to 286 amino acid residues whose sequence is well conserved in eukaryotic species [].; GO: 0003779 actin binding, 0030036 actin cytoskeleton organization, 0008290 F-actin capping protein complex; PDB: 1MQ1_D 1MWN_X 2KBM_Y 2KZ7_A 3AAE_C 3AA6_A 3LK4_G 1IZN_A 3AA7_A 3AAA_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	213
4akr_A	281	Crystal Structure Of The Cytoplasmic Actin Capping		1e-12
1izn_A	286	Crystal Structure Of Actin Filament Capping Protein		1e-06
2kxp_A	275	Solution Nmr Structure Of V-1 Bound To Capping Prot		2e-06

>pdb|4AKR|A Chain A, Crystal Structure Of The Cytoplasmic Actin Capping Protein Cap32_34 From Dictyostelium Discoideum Length = 281

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 14  EIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDV 73
           +IA  FLLN+P  E   V  D+R +L    + + +   +F  YN S M+ +Q   G+   
Sbjct: 9   QIATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQTSKGSA-- 66
Query: 74  LVTSFGELGENEYLDPRTAQVAIVDHVKQ-VGAHYFEEGNVQLD 116
           L+T  GE+  NEYLDP+  QV   DH+KQ V       G ++ D
Sbjct: 67  LITKEGEISNNEYLDPKNKQVITYDHIKQEVTGERSASGEIEQD 110

>pdb|1IZN|A Chain A, Crystal Structure Of Actin Filament Capping Protein Capz Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 4   EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMIC 63
           E  ++ ++K  IA  F+ ++P GE   V  D+RL+LN++ +  E  + +F  YN      
Sbjct: 5   EDRVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTP 64
Query: 64  LQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
           +++      VL+T  G+LG   +LDPR       DH+++
Sbjct: 65  VKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRK 103

>pdb|2KXP|A Chain A, Solution Nmr Structure Of V-1 Bound To Capping Protein (Cp) Length = 275

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 6   ELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQ 65
            ++ ++K  IA  F+ ++P GE   V  D+RL+LN++ +  E  + +F  YN      ++
Sbjct: 1   RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVK 60
Query: 66  MPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
           +      VL+T  G+LG   +LDPR       DH+++
Sbjct: 61  IEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRK 97

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	213
3aa0_A	286	F-actin-capping protein subunit alpha-1; actin cap	4e-28
3aa0_A	286	F-actin-capping protein subunit alpha-1; actin cap	1e-10
4akr_A	281	F-actin-capping protein subunit alpha; actin-bindi	1e-24
4akr_A	281	F-actin-capping protein subunit alpha; actin-bindi	1e-09

>3aa0_A F-actin-capping protein subunit alpha-1; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 2kz7_A 1izn_A 3aa1_A* 3aa6_A 3aa7_A* 3aaa_A 3aae_A 3lk2_A 3lk3_A 3lk4_A 2kxp_A Length = 286

 Score =  106 bits (265), Expect = 4e-28
 Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 1   MAE-EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKS 59
           MA+ E  ++ ++K  IA  F+ ++P GE   V  D+RL+LN++ +  E  + +F  YN  
Sbjct: 1   MADFEDRVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMD 60

Query: 60  HMICLQMPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
               +++      VL+T  G+LG   +LDPR       DH+++
Sbjct: 61  QFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRK 103

>3aa0_A F-actin-capping protein subunit alpha-1; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 2kz7_A 1izn_A 3aa1_A* 3aa6_A 3aa7_A* 3aaa_A 3aae_A 3lk2_A 3lk3_A 3lk4_A 2kxp_A Length = 286

 Score = 58.5 bits (141), Expect = 1e-10
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 102 QVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLE 153
           ++  HY+E+GNVQL +  +  DS    S   +A     I+ + E EY  ++ 
Sbjct: 193 KIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAIS 244

>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum} Length = 281

 Score = 96.7 bits (240), Expect = 1e-24
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 10  KQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAG 69
           ++  +IA  FLLN+P  E   V  D+R +L    + + +   +F  YN S M+ +Q    
Sbjct: 5   QELVQIATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQTS-- 62

Query: 70  AGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
            G  L+T  GE+  NEYLDP+  QV   DH+KQ
Sbjct: 63  KGSALITKEGEISNNEYLDPKNKQVITYDHIKQ 95

>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum} Length = 281

 Score = 55.9 bits (134), Expect = 1e-09
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 87  LDPRTAQVAIVDHVKQVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHET 146
             P +  V     V QV  HYFE+GNVQL+   +   ++       +A++    +   E 
Sbjct: 175 FKPGSGNVTSNGKV-QVNVHYFEDGNVQLNTVTQKQTTSPSADAQSTAVNAFKAIGKAEL 233

Query: 147 EYLASLE 153
               +L+
Sbjct: 234 NLHTALD 240

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	213
4akr_A	281	F-actin-capping protein subunit alpha; actin-bindi	100.0
3aa0_A	286	F-actin-capping protein subunit alpha-1; actin cap	100.0
3aa0_B	244	F-actin-capping protein subunit beta isoforms 1 A;	82.05

>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum}

Probab=100.00  E-value=1.5e-55  Score=392.52  Aligned_cols=159  Identities=32%  Similarity=0.498  Sum_probs=154.1

Q ss_pred             HHHHHHHHHHhhcCCCCcHHHHHHHHHHhhCCCccchHHHhhhHHHHhhhCceeeEcCCCCCeeEEeeccccCCCceecC
Q 028126           10 KQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENEYLDP   89 (213)
Q Consensus        10 ~ek~~Ii~~fI~~APPGE~neV~~DLr~Ll~dd~~~~~~i~~a~~~YN~eq~~~V~l~g~~~~vIIS~~nkl~~~ry~DP   89 (213)
                      +||++||++||++||||||++|++|||.|++||.++++++++||++||++||+||++||.+  ||||+||+++++|||||
T Consensus         5 ~ek~~i~~~fl~~aPPGE~~eV~~Dlr~l~~~d~~~~~~~~~a~~~Yn~~q~~~v~~~g~~--viis~~n~l~~~ry~Dp   82 (281)
T 4akr_A            5 QELVQIATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQTSKGS--ALITKEGEISNNEYLDP   82 (281)
T ss_dssp             HHHHHHHHHHHHTCCTTCHHHHHHHHHTTCSCTTTTTTTHHHHHHHHHHHHTCEEEETTEE--EECCSTTEEETTEEEEG
T ss_pred             HHHHHHHHHHHHcCCCchHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHccEEEEeCCCc--EEEeeccccCCCeEEcc
Confidence            7899999999999999999999999999999999999999999999999999999999954  99999999999999999


Q ss_pred             CCCeEEEEecccc-------------------------------------------------------------------
Q 028126           90 RTAQVAIVDHVKQ-------------------------------------------------------------------  102 (213)
Q Consensus        90 ~sk~sF~~DHl~~-------------------------------------------------------------------  102 (213)
                      +++++|+|||+++                                                                   
T Consensus        83 ~~k~sF~~DHl~~~a~d~~~~~~~~~~~~e~~R~al~~~l~~Yv~~hYp~g~~~Vy~~~~~~~~~l~i~I~~~k~np~NF  162 (281)
T 4akr_A           83 KNKQVITYDHIKQEVTGERSASGEIEQDIEQYRAAFDEEATKYCNEYYPNGVSAVYGTKVSEGIKITVCISTCIYKPNAF  162 (281)
T ss_dssp             GGTEEEEEETTTTEEEEEEECSSCSCGGGHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEEEEEEEGGGT
T ss_pred             CCCeEEEEeccCCEEcCcccccccCccchHHHHHHHHHHHHHHHHhhCCCCcEEEecccCCCCcEEEEEEEeCccCcccc
Confidence            9999999999987                                                                   


Q ss_pred             ---------------------------eeeEEEeeeeEEEeecccccccccccCCCccHHHHHHHHHHHHHHHHHHHHHh
Q 028126          103 ---------------------------VGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLEVL  155 (213)
Q Consensus       103 ---------------------------V~VHYYEDGNVqL~ssK~v~~s~~~~~~~~~A~~IVk~I~~~En~yQ~~L~e~  155 (213)
                                                 |+|||||||||||+++|+++.+++++++.++|++|++.|+++|++||++|+++
T Consensus       163 wnGrWrS~w~~~~~~~~~~l~~~G~I~V~vHYyEDGNVqL~s~k~~~~s~~~~~~~~~a~~iv~~I~~~E~~~q~~l~~~  242 (281)
T 4akr_A          163 YSGRWRSVWTCTFKPGSGNVTSNGKVQVNVHYFEDGNVQLNTVTQKQTTSPSADAQSTAVNAFKAIGKAELNLHTALDNN  242 (281)
T ss_dssp             EEEEEEEEEEEEECTTSSEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEEEEecCCCCeEEECCEEEEEEEEeecceEEEEeccccccccccCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence                                       89999999999999999999999998888899999999999999999999999


Q ss_pred             cccc---cchhhhhhhhh
Q 028126          156 NFLL---IFKCLIIYSLV  170 (213)
Q Consensus       156 f~~L---tFKaLRr~~~~  170 (213)
                      |++|   +||+|||+.-|
T Consensus       243 ~~~ls~~tfK~LRR~LPv  260 (281)
T 4akr_A          243 YSTMGDTTFKALRRALPI  260 (281)
T ss_dssp             HHHHHHTTTTTTSCSSCT
T ss_pred             HHHhCHHHHHHhhccCCC
Confidence            9999   99999999754

>3aa0_A F-actin-capping protein subunit alpha-1; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 2kz7_A 1izn_A 3aa1_A* 3aa6_A 3aa7_A* 3aaa_A 3aae_A 3lk2_A 3lk3_A 3lk4_A 2kxp_A

Probab=100.00  E-value=1.5e-49  Score=354.12  Aligned_cols=170  Identities=31%  Similarity=0.504  Sum_probs=158.9

Q ss_pred             CCc-cCCCCHHHHHHHHHHHhhcCCCCcHHHHHHHHHHhhCCCccchHHHhhhHHHHhhhCceeeEcCCCCCeeEEeecc
Q 028126            1 MAE-EVELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFG   79 (213)
Q Consensus         1 M~~-~~~mS~~ek~~Ii~~fI~~APPGE~neV~~DLr~Ll~dd~~~~~~i~~a~~~YN~eq~~~V~l~g~~~~vIIS~~n   79 (213)
                      ||| +++||+++|.+||.+||.+|||||+++|++||+.|++|+.++++.+++|+++||++||+|+++||.++++|||+||
T Consensus         1 m~~~~~~ms~~~k~~ia~~ll~~aPPge~~~v~~Dl~~L~~dd~ll~~~l~~a~~~yn~dq~~pl~v~~~~~~~li~~yn   80 (286)
T 3aa0_A            1 MADFEDRVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHG   80 (286)
T ss_dssp             ------CCCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHCCHHHHHHHTHHHHHHHHHHTTCEECCTTSSSCEECCGGG
T ss_pred             CCccccccChHHHHHHHHHHHHhCCcHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcceeEEecCCCCcEEEEecc
Confidence            888 6789999999999999999999999999999999999999999999999999999999999999988899999999


Q ss_pred             ccCCCceecCCCCeEEEEecccc---------------------------------------------------------
Q 028126           80 ELGENEYLDPRTAQVAIVDHVKQ---------------------------------------------------------  102 (213)
Q Consensus        80 kl~~~ry~DP~sk~sF~~DHl~~---------------------------------------------------------  102 (213)
                      +++++||+||+++++|+|||+++                                                         
T Consensus        81 ~~~~~~Y~dp~s~~~f~~Dh~~~~~~d~~~~~ps~~l~~~r~~~~~~l~~Y~~~~Y~~g~~sVY~~d~e~~~~~a~~I~~  160 (286)
T 3aa0_A           81 DLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIES  160 (286)
T ss_dssp             EEETTEEEETTTTEEEEEETTTTEEEEEEECCCCCTTHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEETTEEEEEEEEEE
T ss_pred             ccCCCceeCcccCceEEeecccceeccCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCCceEEEecccCCCceEEEEEEE
Confidence            99999999999999999999976                                                         


Q ss_pred             ---------------------------------eeeEEEeeeeEEEeecccccccccccCCCccHHHHHHHHHHHHHHHH
Q 028126          103 ---------------------------------VGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYL  149 (213)
Q Consensus       103 ---------------------------------V~VHYYEDGNVqL~ssK~v~~s~~~~~~~~~A~~IVk~I~~~En~yQ  149 (213)
                                                       |++||||||||||+++|+++.+++++++.+.|++|++.|+++|++||
T Consensus       161 ~k~~~~nfw~G~W~Si~~~~v~~~~~~l~G~i~v~vHY~EdGNV~L~~~k~~~~~~~~~~~~~~a~~i~~~Ie~~E~~~~  240 (286)
T 3aa0_A          161 HQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQ  240 (286)
T ss_dssp             EEEEGGGTEEEEEEEEEEEEEETTEEEEEEEEEEEEEECTTEEEEEEEEEEEEEEEECCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             eccCCccccCceeeeEEEEEeccccceEEEEEEEEEEEecCceEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHH
Confidence                                             68999999999999999999999888777899999999999999999


Q ss_pred             HHHHHhcccc---cchhhhhhhhh
Q 028126          150 ASLEVLNFLL---IFKCLIIYSLV  170 (213)
Q Consensus       150 ~~L~e~f~~L---tFKaLRr~~~~  170 (213)
                      .+|++.|.+|   +||+|||+.-|
T Consensus       241 ~~L~e~y~~ls~~~fk~LRR~LPv  264 (286)
T 3aa0_A          241 TAISENYQTMSDTTFKALRRQLPV  264 (286)
T ss_dssp             HHHHHHHHHHHHTHHHHHCCSSCT
T ss_pred             HHHHHHHHHhhHHHHHHHhccCCc
Confidence            9999999999   99999998754

>3aa0_B F-actin-capping protein subunit beta isoforms 1 A; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 3aa1_B* 3aa6_B 3aa7_B* 2kxp_B 3lk2_B

Probab=82.05  E-value=4.2  Score=35.38  Aligned_cols=70  Identities=14%  Similarity=0.183  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHhhcCCCCcHHHHHHHHHHhhCCCccchHHHhhhHHHHhhhCceeeEc-CCCCCeeEEeeccccCCCc
Q 028126            7 LNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQM-PAGAGDVLVTSFGELGENE   85 (213)
Q Consensus         7 mS~~ek~~Ii~~fI~~APPGE~neV~~DLr~Ll~dd~~~~~~i~~a~~~YN~eq~~~V~l-~g~~~~vIIS~~nkl~~~r   85 (213)
                      |+ +++.+.+-+++..=||-++.+-+++|..|.++   +.+.+..     ..+|-..|.- +.....+|.|.||+ ++..
T Consensus         1 m~-~~~~d~aLdL~RRLpP~~ie~nl~~l~~L~Pd---l~edLLs-----sVDqPLki~~d~~~~k~yL~CdYNR-DgDS   70 (244)
T 3aa0_B            1 MS-DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPS---LCEDLLS-----SVDQPLKIARDKVVGKDYLLCDYNR-DGDS   70 (244)
T ss_dssp             -C-HHHHHHHHHHHTTSCGGGHHHHHHHHHHHCGG---GHHHHHH-----HSCCCCEEEEETTTTEEEEECGGGE-ETTE
T ss_pred             CC-chHHHHHHHHHhcCCHHHHHHHHHHHHHhChH---HHHHHHh-----ccCCcceEeeccccCCeeeeecccC-CCcc
Confidence            45 67788999999999999999999999999875   2222222     2344444433 33346799999999 4433


Q ss_pred             e
Q 028126           86 Y   86 (213)
Q Consensus        86 y   86 (213)
                      |
T Consensus        71 Y   71 (244)
T 3aa0_B           71 Y   71 (244)
T ss_dssp             E
T ss_pred             c
Confidence            3

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	213
d1izna_	275	e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallu	2e-30
d1izna_	275	e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallu	1e-12

>d1izna_ e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]} Length = 275

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz alpha-1 subunit
domain: Capz alpha-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  111 bits (278), Expect = 2e-30
 Identities = 29/97 (29%), Positives = 52/97 (53%)

Query: 6   ELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQ 65
            ++ ++K  IA  F+ ++P GE   V  D+RL+LN++ +  E  + +F  YN      ++
Sbjct: 1   RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVK 60

Query: 66  MPAGAGDVLVTSFGELGENEYLDPRTAQVAIVDHVKQ 102
           +      VL+T  G+LG   +LDPR       DH+++
Sbjct: 61  IEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRK 97

>d1izna_ e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]} Length = 275

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz alpha-1 subunit
domain: Capz alpha-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 62.9 bits (153), Expect = 1e-12
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 102 QVGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLE 153
           ++  HY+E+GNVQL +  +  DS    S   +A     I+ + E EY  ++ 
Sbjct: 187 KIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAIS 238

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	213
d1izna_	275	Capz alpha-1 subunit {Chicken (Gallus gallus) [Tax	100.0
d1iznb_	270	Capz beta-1 subunit {Chicken (Gallus gallus) [TaxI	87.0

>d1izna_ e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]}

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz alpha-1 subunit
domain: Capz alpha-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=6.5e-58  Score=404.50  Aligned_cols=165  Identities=30%  Similarity=0.499  Sum_probs=160.7

Q ss_pred             CCCHHHHHHHHHHHhhcCCCCcHHHHHHHHHHhhCCCccchHHHhhhHHHHhhhCceeeEcCCCCCeeEEeeccccCCCc
Q 028126            6 ELNPKQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMPAGAGDVLVTSFGELGENE   85 (213)
Q Consensus         6 ~mS~~ek~~Ii~~fI~~APPGE~neV~~DLr~Ll~dd~~~~~~i~~a~~~YN~eq~~~V~l~g~~~~vIIS~~nkl~~~r   85 (213)
                      .||++||++||++||++|||||+++|++|||.|++|+.++++++++|+++||++||+||++||.+++||||+||+++++|
T Consensus         1 ~~s~~ek~~i~~~fi~~aPPGE~~~V~~Dl~~l~~d~~~~~~~~~~a~~~yN~~q~~~v~l~g~~~~viis~~n~l~~~r   80 (275)
T d1izna_           1 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGR   80 (275)
T ss_dssp             CCCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTEEECCTTSSCCEEECSTTBCSSSE
T ss_pred             CCCHHHHHHHHHHHHHcCCChhHHHHHHHHHHHhCCchHHHhhHHHHHHHHHHHheEEEEcCCCCccEEEEeccccCCCE
Confidence            48999999999999999999999999999999999999999999999999999999999999988999999999999999


Q ss_pred             eecCCCCeEEEEecccc---------------------------------------------------------------
Q 028126           86 YLDPRTAQVAIVDHVKQ---------------------------------------------------------------  102 (213)
Q Consensus        86 y~DP~sk~sF~~DHl~~---------------------------------------------------------------  102 (213)
                      ||||+++++|+|||+++                                                               
T Consensus        81 y~Dp~~k~sF~~DHl~~~~sd~e~~~~~~~~e~~r~al~~~L~~Yv~~hYp~g~~~vy~~~~~~~~~l~i~I~~~~~~p~  160 (275)
T d1izna_          81 FLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPK  160 (275)
T ss_dssp             EECTTTCEEEECCSSSSCCCCCEECCCCCSSHHHHHHHHHHHHHHHHHHCTTEEEEEEEEEETTEEEEEEEEEEEEEEGG
T ss_pred             EEccCcceEEEEEcccCeEccCccCCCcchhHHHHHHHHHHHHHHHHHhCCCCceEEEccCCCCCceEEEEEEeCcCCcc
Confidence            99999999999999998                                                               


Q ss_pred             ---------------------------eeeEEEeeeeEEEeecccccccccccCCCccHHHHHHHHHHHHHHHHHHHHHh
Q 028126          103 ---------------------------VGAHYFEEGNVQLDAKHECGDSTLFQSPDDSAISISNILRHHETEYLASLEVL  155 (213)
Q Consensus       103 ---------------------------V~VHYYEDGNVqL~ssK~v~~s~~~~~~~~~A~~IVk~I~~~En~yQ~~L~e~  155 (213)
                                                 |+|||||||||||+++|++++++.++++.++|++||+.|+++|++||.+|+++
T Consensus       161 NFwnG~WrS~w~~~~~~~~~~l~G~i~v~vHYyEdGNVqL~s~k~~~~s~~~~~~~~~A~~iv~~I~~~E~~~q~~l~e~  240 (275)
T d1izna_         161 NFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISEN  240 (275)
T ss_dssp             GTEEEEEEEEEEEECCSSEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEEECCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCceeEEEEEEEccCCCcEEEEEEEEEEEEEecCeEEEEEccccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                       99999999999999999999999999988899999999999999999999999


Q ss_pred             cccc---cchhhhhhhhh
Q 028126          156 NFLL---IFKCLIIYSLV  170 (213)
Q Consensus       156 f~~L---tFKaLRr~~~~  170 (213)
                      |++|   +||+|||+.-|
T Consensus       241 f~~ls~~~FK~LRR~LPV  258 (275)
T d1izna_         241 YQTMSDTTFKALRRQLPV  258 (275)
T ss_dssp             HHHHHHTHHHHHSCSSCT
T ss_pred             HHHhCHHHHHHHHhhCCc
Confidence            9999   99999999754

>d1iznb_ e.43.1.2 (B:) Capz beta-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]}

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz beta-1 subunit
domain: Capz beta-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=87.00  E-value=3.5  Score=34.25  Aligned_cols=74  Identities=18%  Similarity=0.186  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHhhcCCCCcHHHHHHHHHHhhCCCccchHHHhhhHHHHhhhCceeeEcC-CCCCeeEEeeccccC------
Q 028126           10 KQKKEIAKWFLLNSPAGEIQYVAKDLRLVLNDNEVYDEAVSESFPIYNKSHMICLQMP-AGAGDVLVTSFGELG------   82 (213)
Q Consensus        10 ~ek~~Ii~~fI~~APPGE~neV~~DLr~Ll~dd~~~~~~i~~a~~~YN~eq~~~V~l~-g~~~~vIIS~~nkl~------   82 (213)
                      ++|.+.+-+++..=||-.+.+-++||..|.++   +.+.+..     ..+|-..|.-+ .....+|.|.||+-+      
T Consensus         2 d~~~daaLdLlRRlpP~~ie~~l~~l~~L~pd---l~edLLs-----sVD~PLki~~d~~~~k~yL~CdyNRDgDSYRSP   73 (270)
T d1iznb_           2 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPS---LCEDLLS-----SVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSP   73 (270)
T ss_dssp             HHHHHHHHHHHTTSCGGGHHHHHHHHHHHCGG---GHHHHHH-----HSCCCCEEEEETTTTEEEEECGGGEETTEEECT
T ss_pred             chHHHHHHHHHhcCChHHHHHHHHHHHhhCHH---HHHHHHH-----hCCCcceEeEchhhCCeeEeecccCCCccccCC
Confidence            57888999999999999999999999999875   2233332     23555444433 334679999999943      


Q ss_pred             -CCceecCCC
Q 028126           83 -ENEYLDPRT   91 (213)
Q Consensus        83 -~~ry~DP~s   91 (213)
                       .++|+.|-.
T Consensus        74 wSNkY~P~~e   83 (270)
T d1iznb_          74 WSNKYDPPLE   83 (270)
T ss_dssp             TTCCEESCCS
T ss_pred             CCCCcCCCcc
Confidence             245665544