Citrus Sinensis ID: 028167

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210--
MGANSLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGVSHLVVLDILLARTYLNNSIIQTT
cccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccEEccccEEEEccccccHHHHHHHHHHcccccEEEEEcccccEEEEcccccccccccccHHHHHHHHHccccHHHHHHHHHcccccccEEEcccEEEEEccccccccHHHHccccccccccccccEEEcccccccccccEEEEEEcHHHHcccccccccccccc
cccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccEEEEcccEEEEcEccccHHHHHHHHHHHccHHHHHHHHccccEEEcccccccHHHHccccHHHHHHHHcccHHHHHHHHHHHccccEEEEEcccEEEEcccccccccHHHHHHcccccccccccccccccccccccccccccEcccHHHHHHHHHccccEEEEc
mganslstdttTDLDEQISQlmqckplsepqVKALCEKAKEILMEesnvqpvkspvticgdihgQFHDLAELFQIGGKLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLfdyfpltalsqkysvcmvgcpLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGVSHLVVLDILLARTYLNNSIIQTT
mganslstdtttdldEQISQLmqckplsepQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKLLVALKVRYPQRitilrgnhesrqiTQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGVSHLVVLDILLArtylnnsiiqtt
MGANslstdtttdldEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGVSHLVVLDILLARTYLNNSIIQTT
***********************************C*****IL*****VQPVKSPVTICGDIHGQFHDLAELFQIGGKLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGVSHLVVLDILLARTYLNNSII***
**************DEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGVSHLVVLDILLARTYLNNSIIQ**
************DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGVSHLVVLDILLARTYLNNSIIQTT
**********TTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGVSHLVVLDILLARTYLNNSIIQTT
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
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MGANSLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGVSHLVVLDILLARTYLNNSIIQTT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query212 2.2.26 [Sep-21-2011]
P48578313 Serine/threonine-protein yes no 0.698 0.472 0.761 9e-70
Q07100313 Serine/threonine-protein yes no 0.698 0.472 0.75 5e-69
Q06009313 Serine/threonine-protein N/A no 0.698 0.472 0.738 3e-67
P23778309 Serine/threonine-protein N/A no 0.679 0.466 0.732 8e-65
Q9XGH7312 Serine/threonine-protein N/A no 0.669 0.455 0.722 8e-64
O04860314 Serine/threonine-protein N/A no 0.641 0.433 0.743 1e-63
Q10BT5307 Serine/threonine-protein yes no 0.636 0.439 0.742 4e-63
A2XN40307 Serine/threonine-protein N/A no 0.636 0.439 0.742 4e-63
A3C4N5314 Serine/threonine-protein no no 0.636 0.429 0.735 3e-62
P0C5D7315 Putative serine/threonine N/A no 0.636 0.428 0.729 3e-61
>sp|P48578|PP2A3_ARATH Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1 Back     alignment and function desciption
 Score =  263 bits (671), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 131/172 (76%), Positives = 137/172 (79%), Gaps = 24/172 (13%)

Query: 1   MGANSLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICG 60
           MGANSL TD T DLDEQISQLMQCKPLSE QV+ALCEKAKEILM+ESNVQPVKSPVTICG
Sbjct: 1   MGANSLPTDATLDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICG 60

Query: 61  DIHGQFHDLAELFQIGGK------------------------LLVALKVRYPQRITILRG 96
           DIHGQFHDLAELF+IGGK                        LLV LKVRYPQRITILRG
Sbjct: 61  DIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRG 120

Query: 97  NHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVG 148
           NHESRQITQVYGFYDECLRKYGNAN+WKIFTDLFDYFPLTAL +    C+ G
Sbjct: 121 NHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHG 172

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q07100|PP2A4_ARATH Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2 Back     alignment and function description
>sp|Q06009|PP2A_MEDSA Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Medicago sativa GN=PP2A PE=2 SV=1 Back     alignment and function description
>sp|P23778|PP2A_BRANA Serine/threonine-protein phosphatase PP2A catalytic subunit (Fragment) OS=Brassica napus PE=2 SV=2 Back     alignment and function description
>sp|Q9XGH7|PP2A_TOBAC Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|O04860|PP2A5_TOBAC Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum GN=NPP5 PE=2 SV=1 Back     alignment and function description
>sp|Q10BT5|PP2A2_ORYSJ Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A2 PE=2 SV=1 Back     alignment and function description
>sp|A2XN40|PP2A2_ORYSI Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A2 PE=2 SV=2 Back     alignment and function description
>sp|A3C4N5|PP2A4_ORYSJ Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2 Back     alignment and function description
>sp|P0C5D7|PP2A4_ORYSI Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A4 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query212
226530458232 PP2Ac-2 - Phosphatase 2A isoform 2 belon 0.924 0.844 0.666 1e-72
11262975299 phosphoprotein phosphatase (EC 3.1.3.16) 0.698 0.494 0.761 3e-68
18410971 313 serine/threonine-protein phosphatase PP2 0.698 0.472 0.761 5e-68
255572254289 protein phsophatase-2a, putative [Ricinu 0.698 0.512 0.831 1e-67
255580686 313 protein phsophatase-2a, putative [Ricinu 0.698 0.472 0.75 2e-67
18405985 313 serine/threonine-protein phosphatase PP2 0.698 0.472 0.75 2e-67
4204947 352 serine/threonine protein phosphatase 2A- 0.698 0.420 0.744 3e-67
224138154 313 predicted protein [Populus trichocarpa] 0.698 0.472 0.744 1e-66
224091552 313 predicted protein [Populus trichocarpa] 0.698 0.472 0.732 6e-66
358348144 313 Serine/threonine protein phosphatase [Me 0.698 0.472 0.738 2e-65
>gi|226530458|ref|NP_001150187.1| PP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2 [Zea mays] gi|195637408|gb|ACG38172.1| PP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2 [Zea mays] Back     alignment and taxonomy information
 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/222 (66%), Positives = 161/222 (72%), Gaps = 26/222 (11%)

Query: 14  LDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELF 73
           LD+QI +LMQCKPL+EP+V+ALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELF
Sbjct: 8   LDDQIERLMQCKPLAEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELF 67

Query: 74  QIGGK------------------------LLVALKVRYPQRITILRGNHESRQITQVYGF 109
           +IGGK                        LLVALKVRYPQRITILRGNHESRQITQVYGF
Sbjct: 68  RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGF 127

Query: 110 YDECLRKYGNANIWKIFTDLFDYFPLTAL--SQKYSVCMVGCPLQLKLLIISGTLIVFKR 167
           YDECLRKYGNAN+WK FTDLFDYFPLTAL  S+ +  CMV     L+    S TL   K+
Sbjct: 128 YDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFFACMVDYRHPLRPSTTSATLTASKK 187

Query: 168 FLMKGPCVICYGLTQMIDVVGVSHLVVLDILLARTYLNNSII 209
           FL K  CVI  GL QMI V GV  LVVL I   R Y ++S I
Sbjct: 188 FLTKVQCVIFCGLIQMIGVAGVFLLVVLVIPSDRIYQSSSTI 229

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|11262975|pir||T45670 phosphoprotein phosphatase (EC 3.1.3.16) 2A-4 (version 2) [similarity] - Arabidopsis thaliana gi|6735367|emb|CAB68188.1| phosphoprotein phosphatase 2A isoform 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18410971|ref|NP_567066.1| serine/threonine-protein phosphatase PP2A-3 catalytic subunit [Arabidopsis thaliana] gi|297820682|ref|XP_002878224.1| protein phosphatase 2A-3 [Arabidopsis lyrata subsp. lyrata] gi|1352664|sp|P48578.1|PP2A3_ARATH RecName: Full=Serine/threonine-protein phosphatase PP2A-3 catalytic subunit; AltName: Full=Protein phosphatase 2A isoform 3 gi|473259|gb|AAA64941.1| Ser/Thr protein phosphatase [Arabidopsis thaliana] gi|4204949|gb|AAD10855.1| serine/threonine protein phosphatase 2A-4 catalytic subunit [Arabidopsis thaliana] gi|15810367|gb|AAL07071.1| putative phosphoprotein phosphatase 2A isoform 4 [Arabidopsis thaliana] gi|16209682|gb|AAL14399.1| AT3g58500/F14P22_90 [Arabidopsis thaliana] gi|21360431|gb|AAM47331.1| AT3g58500/F14P22_90 [Arabidopsis thaliana] gi|297324062|gb|EFH54483.1| protein phosphatase 2A-3 [Arabidopsis lyrata subsp. lyrata] gi|332646269|gb|AEE79790.1| serine/threonine-protein phosphatase PP2A-3 catalytic subunit [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255572254|ref|XP_002527066.1| protein phsophatase-2a, putative [Ricinus communis] gi|223533571|gb|EEF35310.1| protein phsophatase-2a, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255580686|ref|XP_002531165.1| protein phsophatase-2a, putative [Ricinus communis] gi|223529235|gb|EEF31208.1| protein phsophatase-2a, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|18405985|ref|NP_565974.1| serine/threonine-protein phosphatase PP2A-4 catalytic subunit [Arabidopsis thaliana] gi|297827949|ref|XP_002881857.1| protein phosphatase 2A-4 [Arabidopsis lyrata subsp. lyrata] gi|1352663|sp|Q07100.2|PP2A4_ARATH RecName: Full=Serine/threonine-protein phosphatase PP2A-4 catalytic subunit; AltName: Full=Protein phosphatase 2A isoform 4 gi|466441|gb|AAA64742.1| Ser/Thr protein phosphatase [Arabidopsis thaliana] gi|4567320|gb|AAD23731.1| serine threonine protein phosphatase PP2A-3 catalytic subunit [Arabidopsis thaliana] gi|20198072|gb|AAM15383.1| serine/threonine protein phosphatase PP2A-3 catalytic subunit [Arabidopsis thaliana] gi|33589738|gb|AAQ22635.1| At2g42500/F14N22.23 [Arabidopsis thaliana] gi|297327696|gb|EFH58116.1| protein phosphatase 2A-4 [Arabidopsis lyrata subsp. lyrata] gi|330255033|gb|AEC10127.1| serine/threonine-protein phosphatase PP2A-4 catalytic subunit [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|4204947|gb|AAD10854.1| serine/threonine protein phosphatase 2A-3 catalytic subunit [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224138154|ref|XP_002322743.1| predicted protein [Populus trichocarpa] gi|222867373|gb|EEF04504.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224091552|ref|XP_002309283.1| predicted protein [Populus trichocarpa] gi|222855259|gb|EEE92806.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|358348144|ref|XP_003638109.1| Serine/threonine protein phosphatase [Medicago truncatula] gi|548441|sp|Q06009.1|PP2A_MEDSA RecName: Full=Serine/threonine-protein phosphatase PP2A catalytic subunit gi|287811|emb|CAA49849.1| phosphoprotein phosphatase type 2A [Medicago sativa] gi|355504044|gb|AES85247.1| Serine/threonine protein phosphatase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query212
TAIR|locus:2076451313 PP2A-4 "protein phosphatase 2A 0.330 0.223 0.857 1.6e-61
TAIR|locus:2041579313 PP2A-3 "AT2G42500" [Arabidopsi 0.330 0.223 0.857 4.2e-61
UNIPROTKB|E2QV40311 PPP2CB "Uncharacterized protei 0.330 0.225 0.833 1.3e-51
UNIPROTKB|P48463309 PPP2CA "Serine/threonine-prote 0.330 0.226 0.828 1.3e-51
UNIPROTKB|Q0P594309 PPP2CB "Serine/threonine-prote 0.330 0.226 0.828 2.6e-51
UNIPROTKB|F6X958309 PPP2CB "Serine/threonine-prote 0.330 0.226 0.828 2.6e-51
UNIPROTKB|P62714309 PPP2CB "Serine/threonine-prote 0.330 0.226 0.828 2.6e-51
MGI|MGI:1321161309 Ppp2cb "protein phosphatase 2 0.330 0.226 0.828 2.6e-51
RGD|3381309 Ppp2cb "protein phosphatase 2, 0.330 0.226 0.828 2.6e-51
ZFIN|ZDB-GENE-040426-2487309 ppp2cb "protein phosphatase 2 0.330 0.226 0.828 2.6e-51
TAIR|locus:2076451 PP2A-4 "protein phosphatase 2A-4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 324 (119.1 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
 Identities = 60/70 (85%), Positives = 63/70 (90%)

Query:    79 LLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTAL 138
             LLV LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WKIFTDLFDYFPLTAL
Sbjct:   103 LLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTAL 162

Query:   139 SQKYSVCMVG 148
              +    C+ G
Sbjct:   163 VESEIFCLHG 172
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0016787 "hydrolase activity" evidence=IEA
GO:0005634 "nucleus" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0000159 "protein phosphatase type 2A complex" evidence=TAS
GO:0006470 "protein dephosphorylation" evidence=TAS
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
TAIR|locus:2041579 PP2A-3 "AT2G42500" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E2QV40 PPP2CB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P48463 PPP2CA "Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q0P594 PPP2CB "Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F6X958 PPP2CB "Serine/threonine-protein phosphatase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P62714 PPP2CB "Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1321161 Ppp2cb "protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3381 Ppp2cb "protein phosphatase 2, catalytic subunit, beta isozyme" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2487 ppp2cb "protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q07100PP2A4_ARATH3, ., 1, ., 3, ., 1, 60.750.69810.4728yesno
P48578PP2A3_ARATH3, ., 1, ., 3, ., 1, 60.76160.69810.4728yesno
Q10BT5PP2A2_ORYSJ3, ., 1, ., 3, ., 1, 60.74210.63670.4397yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.914
3rd Layer3.1.30.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.5__2291__AT3G58500.1
annotation not avaliable (313 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query212
cd07415285 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phos 2e-85
PTZ00239303 PTZ00239, PTZ00239, serine/threonine protein phosp 8e-64
smart00156271 smart00156, PP2Ac, Protein phosphatase 2A homologu 7e-49
cd07414293 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-li 4e-41
cd07416305 cd07416, MPP_PP2B, PP2B, metallophosphatase domain 3e-34
PTZ00480320 PTZ00480, PTZ00480, serine/threonine-protein phosp 5e-32
cd07419311 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 pho 1e-26
cd07417316 cd07417, MPP_PP5_C, PP5, C-terminal metallophospha 4e-24
PTZ00244294 PTZ00244, PTZ00244, serine/threonine-protein phosp 7e-22
cd07418 377 cd07418, MPP_PP7, PP7, metallophosphatase domain 4e-19
cd00144225 cd00144, MPP_PPP_family, phosphoprotein phosphatas 2e-17
cd07420321 cd07420, MPP_RdgC, Drosophila melanogaster RdgC an 2e-11
pfam00149185 pfam00149, Metallophos, Calcineurin-like phosphoes 1e-10
COG0639155 COG0639, ApaH, Diadenosine tetraphosphatase and re 2e-05
>gnl|CDD|163658 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain Back     alignment and domain information 
 Score =  254 bits (650), Expect = 2e-85
 Identities = 97/150 (64%), Positives = 112/150 (74%), Gaps = 24/150 (16%)

Query: 13  DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAEL 72
           DLD+ I QL +C+ L E +VK+LCEKAKEIL++ESNVQ V+SPVT+CGDIHGQF+DL EL
Sbjct: 1   DLDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLEL 60

Query: 73  FQIGGK------------------------LLVALKVRYPQRITILRGNHESRQITQVYG 108
           F++GG                         LL+ALKVRYP RIT+LRGNHESRQITQVYG
Sbjct: 61  FRVGGDPPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYG 120

Query: 109 FYDECLRKYGNANIWKIFTDLFDYFPLTAL 138
           FYDECLRKYGNAN+WK  TDLFDY PL AL
Sbjct: 121 FYDECLRKYGNANVWKYCTDLFDYLPLAAL 150

PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2A belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 285
>gnl|CDD|173488 PTZ00239, PTZ00239, serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information
>gnl|CDD|197547 smart00156, PP2Ac, Protein phosphatase 2A homologues, catalytic domain Back     alignment and domain information
>gnl|CDD|163657 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163659 cd07416, MPP_PP2B, PP2B, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|185658 PTZ00480, PTZ00480, serine/threonine-protein phosphatase; Provisional Back     alignment and domain information
>gnl|CDD|163662 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163660 cd07417, MPP_PP5_C, PP5, C-terminal metallophosphatase domain Back     alignment and domain information
>gnl|CDD|140271 PTZ00244, PTZ00244, serine/threonine-protein phosphatase PP1; Provisional Back     alignment and domain information
>gnl|CDD|163661 cd07418, MPP_PP7, PP7, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163663 cd07420, MPP_RdgC, Drosophila melanogaster RdgC and related proteins, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase Back     alignment and domain information
>gnl|CDD|223712 COG0639, ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 212
KOG0372303 consensus Serine/threonine specific protein phosph 100.0
KOG0375 517 consensus Serine-threonine phosphatase 2B, catalyt 100.0
KOG0373306 consensus Serine/threonine specific protein phosph 100.0
KOG0371319 consensus Serine/threonine protein phosphatase 2A, 100.0
KOG0374331 consensus Serine/threonine specific protein phosph 100.0
cd07420321 MPP_RdgC Drosophila melanogaster RdgC and related 100.0
cd07415285 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein 100.0
PTZ00239303 serine/threonine protein phosphatase 2A; Provision 100.0
cd07417316 MPP_PP5_C PP5, C-terminal metallophosphatase domai 100.0
cd07416305 MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca 100.0
PTZ00480320 serine/threonine-protein phosphatase; Provisional 100.0
PTZ00244294 serine/threonine-protein phosphatase PP1; Provisio 100.0
cd07414293 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme 100.0
cd07418377 MPP_PP7 PP7, metallophosphatase domain. PP7 is a p 100.0
smart00156271 PP2Ac Protein phosphatase 2A homologues, catalytic 100.0
cd07419311 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a 100.0
KOG0376476 consensus Serine-threonine phosphatase 2A, catalyt 99.97
KOG0377 631 consensus Protein serine/threonine phosphatase RDG 99.96
cd00144225 MPP_PPP_family phosphoprotein phosphatases of the 99.64
PRK13625245 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision 99.51
cd07423234 MPP_PrpE Bacillus subtilis PrpE and related protei 99.4
cd07424207 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do 99.34
cd07422257 MPP_ApaH Escherichia coli ApaH and related protein 99.32
TIGR00668279 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric 99.27
PRK00166275 apaH diadenosine tetraphosphatase; Reviewed 99.24
cd07413222 MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat 99.22
PRK11439218 pphA serine/threonine protein phosphatase 1; Provi 99.16
cd07425208 MPP_Shelphs Shewanella-like phosphatases, metallop 99.07
PRK09968218 serine/threonine-specific protein phosphatase 2; P 99.01
PHA02239235 putative protein phosphatase 99.0
cd07421 304 MPP_Rhilphs Rhilph phosphatases, metallophosphatas 98.93
PF00149200 Metallophos: Calcineurin-like phosphoesterase; Int 97.71
cd07397238 MPP_DevT Myxococcus xanthus DevT and related prote 97.7
cd00841155 MPP_YfcE Escherichia coli YfcE and related protein 97.51
COG0639155 ApaH Diadenosine tetraphosphatase and related seri 97.44
PF0832195 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 97.42
TIGR00040158 yfcE phosphoesterase, MJ0936 family. Members of th 96.84
PF12850156 Metallophos_2: Calcineurin-like phosphoesterase su 96.78
KOG0376 476 consensus Serine-threonine phosphatase 2A, catalyt 95.53
PRK09453182 phosphodiesterase; Provisional 95.37
cd07379135 MPP_239FB Homo sapiens 239FB and related proteins, 95.3
cd00844 262 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t 95.21
cd07392188 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel 94.94
cd07394178 MPP_Vps29 Homo sapiens Vps29 and related proteins, 94.72
cd00838131 MPP_superfamily metallophosphatase superfamily, me 93.72
cd07388224 MPP_Tt1561 Thermus thermophilus Tt1561 and related 92.89
cd07391172 MPP_PF1019 Pyrococcus furiosus PF1019 and related 92.63
cd07404166 MPP_MS158 Microscilla MS158 and related proteins, 91.89
cd07403129 MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel 91.77
COG0622172 Predicted phosphoesterase [General function predic 91.01
TIGR00024225 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 88.47
cd07385223 MPP_YkuE_C Bacillus subtilis YkuE and related prot 87.5
cd07380150 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re 85.18
TIGR03729239 acc_ester putative phosphoesterase. Members of thi 80.63
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-52  Score=359.16  Aligned_cols=179  Identities=53%  Similarity=0.833  Sum_probs=171.2

Q ss_pred             CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCceeEeccCCCCHHHHHHHHHHcCc--------------
Q 028167           13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGK--------------   78 (212)
Q Consensus        13 ~l~~~i~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~ll~i~~pi~VvGDiHG~~~dL~~if~~~G~--------------   78 (212)
                      ++|+.++++++++.+++.++..||.+++++|++|+|++.+++|++|||||||||+||+.+|++.|.              
T Consensus         2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD   81 (303)
T KOG0372|consen    2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD   81 (303)
T ss_pred             cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence            689999999999999999999999999999999999999999999999999999999999999876              


Q ss_pred             ----------hhhhhhhhcCCcEEEecccccccchhhhcccHHHHHHhhCChhhHHHHHhhhcccccccccCceEEEEcC
Q 028167           79 ----------LLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVG  148 (212)
Q Consensus        79 ----------ll~~lKl~~P~~v~lLRGNHE~~~~n~~ygF~~e~~~kyg~~~~~~~~~~~F~~LPlaavi~~~ilc~HG  148 (212)
                                +|+++|++||++++|+|||||+++++++||||+||.+|||+..+|+.+.++|++||+||++++++||+||
T Consensus        82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG  161 (303)
T KOG0372|consen   82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG  161 (303)
T ss_pred             cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence                      8899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccccchhhhhhhccCCCCCccccccccccceecCceeee
Q 028167          149 CPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGVSHLV  193 (212)
Q Consensus       149 G~~~~~~~~~~~~i~~i~R~~~p~~~gi~~dll~~~~~~~~~~~~  193 (212)
                      |.+|++.  ++++|+.++|.++-|..|.|||+||..|-.+.|..+
T Consensus       162 GlSP~i~--~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~  204 (303)
T KOG0372|consen  162 GLSPSIQ--TLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGL  204 (303)
T ss_pred             CCCcchh--hHHHHHHhhccccCCCCCcchheeccCcccCCCccc
Confidence            9888644  589999999999999999999999999988876544

>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only] Back     alignment and domain information
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] Back     alignment and domain information
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] Back     alignment and domain information
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain Back     alignment and domain information
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain Back     alignment and domain information
>cd07416 MPP_PP2B PP2B, metallophosphatase domain Back     alignment and domain information
>PTZ00480 serine/threonine-protein phosphatase; Provisional Back     alignment and domain information
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional Back     alignment and domain information
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07418 MPP_PP7 PP7, metallophosphatase domain Back     alignment and domain information
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain Back     alignment and domain information
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] Back     alignment and domain information
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] Back     alignment and domain information
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional Back     alignment and domain information
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain Back     alignment and domain information
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain Back     alignment and domain information
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) Back     alignment and domain information
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed Back     alignment and domain information
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain Back     alignment and domain information
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional Back     alignment and domain information
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain Back     alignment and domain information
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional Back     alignment and domain information
>PHA02239 putative protein phosphatase Back     alignment and domain information
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain Back     alignment and domain information
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 Back     alignment and domain information
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain Back     alignment and domain information
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] Back     alignment and domain information
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases Back     alignment and domain information
>TIGR00040 yfcE phosphoesterase, MJ0936 family Back     alignment and domain information
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] Back     alignment and domain information
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] Back     alignment and domain information
>PRK09453 phosphodiesterase; Provisional Back     alignment and domain information
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain Back     alignment and domain information
>COG0622 Predicted phosphoesterase [General function prediction only] Back     alignment and domain information
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related Back     alignment and domain information
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>TIGR03729 acc_ester putative phosphoesterase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query212
3p71_C304 Crystal Structure Of The Complex Of Lcmt-1 And Pp2a 2e-53
2nyl_C293 Crystal Structure Of Protein Phosphatase 2a (Pp2a) 2e-53
3fga_C309 Structural Basis Of Pp2a And Sgo Interaction Length 2e-53
2ie4_C309 Structure Of The Protein Phosphatase 2a Core Enzyme 2e-53
2ie3_C309 Structure Of The Protein Phosphatase 2a Core Enzyme 2e-53
3c5w_C310 Complex Between Pp2a-Specific Methylesterase Pme-1 2e-53
2iae_C309 Crystal Structure Of A Protein Phosphatase 2a (Pp2a 2e-53
3n5u_B300 Crystal Structure Of An Rb C-Terminal Peptide Bound 9e-26
3e7a_A299 Crystal Structure Of Protein Phosphatase-1 Bound To 9e-26
3v4y_A306 Crystal Structure Of The First Nuclear Pp1 Holoenzy 1e-25
1fjm_A330 Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isofor 1e-25
4g9j_A331 Protein SerTHR PHOSPHATASE-1 In Complex With Cell-P 1e-25
1u32_A293 Crystal Structure Of A Protein Phosphatase-1: Calci 1e-25
3egg_A329 Crystal Structure Of A Complex Between Protein Phos 1e-25
1jk7_A323 Crystal Structure Of The Tumor-Promoter Okadaic Aci 2e-25
2o8a_A329 Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Leng 2e-25
1s70_A330 Complex Between Protein Ser/thr Phosphatase-1 (delt 4e-25
3ll8_A 357 Crystal Structure Of Calcineurin In Complex With Ak 2e-19
1m63_A 372 Crystal Structure Of Calcineurin-Cyclophilin-Cyclos 2e-19
1mf8_A 373 Crystal Structure Of Human Calcineurin Complexed Wi 2e-19
1aui_A 521 Human Calcineurin Heterodimer Length = 521 3e-19
1tco_A 375 Ternary Complex Of A Calcineurin A Fragment, Calcin 3e-19
2p6b_A 383 Crystal Structure Of Human Calcineurin In Complex W 3e-19
2jog_A327 Structure Of The Calcineurin-Nfat Complex Length = 3e-19
1wao_1477 Pp5 Structure Length = 477 4e-13
1s95_A333 Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 5e-13
3h60_A315 Catalytic Domain Of Human SerineTHREONINE PHOSPHATA 5e-13
3icf_A335 Structure Of Protein SerineTHREONINE PHOSPHATASE FR 4e-12
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  205 bits (521), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 103/157 (65%), Positives = 114/157 (72%), Gaps = 24/157 (15%)
Query: 16  EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQI 75
           + I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+I
Sbjct: 12  QWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRI 71
Query: 76  GGK------------------------LLVALKVRYPQRITILRGNHESRQITQVYGFYD 111
           GGK                        LLVALKVRY +RITILRGNHESRQITQVYGFYD
Sbjct: 72  GGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYD 131
Query: 112 ECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVG 148
           ECLRKYGNAN+WK FTDLFDY PLTAL      C+ G
Sbjct: 132 ECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHG 168
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 293 Back     alignment and structure
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction Length = 309 Back     alignment and structure
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Okadaic Acid Length = 309 Back     alignment and structure
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Tumor- Inducing Toxins Length = 309 Back     alignment and structure
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And Pp2a Core Enzyme Length = 310 Back     alignment and structure
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 309 Back     alignment and structure
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The Natural Toxin Nodularin-R Length = 299 Back     alignment and structure
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme Length = 306 Back     alignment and structure
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type 1) Complexed With Microcystin-Lr Toxin Length = 330 Back     alignment and structure
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With Cell-Permeable Peptide Length = 331 Back     alignment and structure
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin Hybrid Bound To Okadaic Acid Length = 293 Back     alignment and structure
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase 1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of Spinophilin Length = 329 Back     alignment and structure
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound To Protein Phosphatase-1 Length = 323 Back     alignment and structure
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Length = 329 Back     alignment and structure
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 330 Back     alignment and structure
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 357 Back     alignment and structure
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin Shows Common But Distinct Recognition Of Immunophilin-Drug Complexes Length = 372 Back     alignment and structure
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 373 Back     alignment and structure
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer Length = 521 Back     alignment and structure
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 375 Back     alignment and structure
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 383 Back     alignment and structure
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex Length = 327 Back     alignment and structure
>pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477 Back     alignment and structure
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 Length = 333 Back     alignment and structure
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5 (Pp5c)with Two Mn2+ Atoms Length = 315 Back     alignment and structure
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM SACCHAROMYCES Cerevisiae With Similarity To Human Phosphatase Pp5 Length = 335 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query212
2ie4_C309 PP2A-alpha;, serine/threonine-protein phosphatase 2e-83
3ll8_A 357 Serine/threonine-protein phosphatase 2B catalytic 2e-78
1fjm_A330 Protein serine/threonine phosphatase-1 (alpha ISO 7e-76
3e7a_A299 PP-1A, serine/threonine-protein phosphatase PP1-al 2e-75
3h63_A315 Serine/threonine-protein phosphatase 5; metalloenz 3e-75
1aui_A 521 Calcineurin, serine/threonine phosphatase 2B; hydr 6e-75
1wao_1477 Serine/threonine protein phosphatase 5; hydrolase, 8e-73
3icf_A335 PPT, serine/threonine-protein phosphatase T; IRO m 7e-72
2z72_A342 Protein-tyrosine-phosphatase; cold-active enzyme, 4e-04
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Length = 309 Back     alignment and structure
 Score =  249 bits (637), Expect = 2e-83
 Identities = 104/153 (67%), Positives = 115/153 (75%), Gaps = 24/153 (15%)

Query: 10  TTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDL 69
            T +LD+ I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL
Sbjct: 6   FTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDL 65

Query: 70  AELFQIGGK------------------------LLVALKVRYPQRITILRGNHESRQITQ 105
            ELF+IGGK                        LLVALKVRY +RITILRGNHESRQITQ
Sbjct: 66  MELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQ 125

Query: 106 VYGFYDECLRKYGNANIWKIFTDLFDYFPLTAL 138
           VYGFYDECLRKYGNAN+WK FTDLFDY PLTAL
Sbjct: 126 VYGFYDECLRKYGNANVWKYFTDLFDYLPLTAL 158
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Length = 357 Back     alignment and structure
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Length = 330 Back     alignment and structure
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Length = 299 Back     alignment and structure
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Length = 315 Back     alignment and structure
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Length = 521 Back     alignment and structure
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 Back     alignment and structure
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Length = 335 Back     alignment and structure
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Length = 342 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query212
3ll8_A 357 Serine/threonine-protein phosphatase 2B catalytic 100.0
3e7a_A299 PP-1A, serine/threonine-protein phosphatase PP1-al 100.0
3icf_A335 PPT, serine/threonine-protein phosphatase T; IRO m 100.0
3h63_A315 Serine/threonine-protein phosphatase 5; metalloenz 100.0
2ie4_C309 PP2A-alpha;, serine/threonine-protein phosphatase 100.0
1aui_A 521 Calcineurin, serine/threonine phosphatase 2B; hydr 100.0
1fjm_A330 Protein serine/threonine phosphatase-1 (alpha ISO 100.0
1wao_1477 Serine/threonine protein phosphatase 5; hydrolase, 100.0
2z72_A342 Protein-tyrosine-phosphatase; cold-active enzyme, 99.78
2dfj_A280 Diadenosinetetraphosphatase; helices and strands m 99.68
2qjc_A262 Diadenosine tetraphosphatase, putative; putative d 99.44
1g5b_A221 Serine/threonine protein phosphatase; bacteriophag 99.27
3rqz_A246 Metallophosphoesterase; PSI-biology, midwest cente 98.46
1nnw_A252 Hypothetical protein; structural genomics, PSI, pr 98.21
3qfm_A270 SAPH, putative uncharacterized protein; sandwich f 98.11
3ck2_A176 Conserved uncharacterized protein (predicted phosp 97.02
2kkn_A178 Uncharacterized protein; protein phosphatase 2A ho 96.65
1s3l_A190 Hypothetical protein MJ0936; phosphodiesterase, nu 96.28
2a22_A215 Vacuolar protein sorting 29; alpha-beta-BETA-alpha 96.03
1su1_A208 Hypothetical protein YFCE; structural genomics, ph 95.58
1uf3_A228 Hypothetical protein TT1561; metallo-dependent pho 95.51
1z2w_A192 Vacuolar protein sorting 29; VPS29, retromer, phos 95.07
2yvt_A260 Hypothetical protein AQ_1956; structural genomics, 94.04
3d03_A274 Phosphohydrolase; glycerophosphodiesterase, metall 88.02
1xm7_A195 Hypothetical protein AQ_1665; structural genomics, 86.18
3ib7_A 330 ICC protein; metallophosphoesterase, alpha-beta fo 84.68
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Back     alignment and structure
Probab=100.00  E-value=1.7e-42  Score=313.27  Aligned_cols=179  Identities=32%  Similarity=0.529  Sum_probs=168.3

Q ss_pred             CCCccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCceeEeccCCCCHHHHHHHHHHcCc---------
Q 028167            8 TDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGK---------   78 (212)
Q Consensus         8 ~~~~~~l~~~i~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~ll~i~~pi~VvGDiHG~~~dL~~if~~~G~---------   78 (212)
                      ..++.+++.+++++++++.++++++.+||++|+++|++||+++++++|++||||||||+++|.++|+..|.         
T Consensus        24 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfL  103 (357)
T 3ll8_A           24 NDGKPRVDILKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFL  103 (357)
T ss_dssp             TTSCBCHHHHHHHHHTTCCBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEEC
T ss_pred             CCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCcEEEEC
Confidence            34788999999999999999999999999999999999999999999999999999999999999987653         


Q ss_pred             ---------------hhhhhhhhcCCcEEEecccccccchhhhcccHHHHHHhhCChhhHHHHHhhhcccccccccCceE
Q 028167           79 ---------------LLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYS  143 (212)
Q Consensus        79 ---------------ll~~lKl~~P~~v~lLRGNHE~~~~n~~ygF~~e~~~kyg~~~~~~~~~~~F~~LPlaavi~~~i  143 (212)
                                     +++++|+.||++++++|||||++.++..|||++||..+|+ .++|+.+.++|++||++|++++++
T Consensus       104 GD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~-~~l~~~~~~~f~~LPlaaii~~~i  182 (357)
T 3ll8_A          104 GDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMDAFDCLPLAALMNQQF  182 (357)
T ss_dssp             SCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC-HHHHHHHHHHHHTSCSEEEETTTE
T ss_pred             CCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccc-hhHHHHHHHHHHhCCcceEEcccE
Confidence                           7889999999999999999999999999999999999994 799999999999999999999999


Q ss_pred             EEEcCCCccccccccchhhhhhhccCCCCCccccccccccceecCc
Q 028167          144 VCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGV  189 (212)
Q Consensus       144 lc~HGG~~~~~~~~~~~~i~~i~R~~~p~~~gi~~dll~~~~~~~~  189 (212)
                      +|+|||+++.  ..++++|++++|++++|..|++||+||+.|....
T Consensus       183 l~vHGGlsp~--l~~ld~I~~i~R~~e~p~~g~~~DlLWSDP~~~~  226 (357)
T 3ll8_A          183 LCVHGGLSPE--INTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDF  226 (357)
T ss_dssp             EECSSCCCTT--CCSHHHHHTCCCSSCCCSSSHHHHHHHCEECTTT
T ss_pred             EEEecCcCcc--cCCHHHHhhccccccCCccCchhHhhccCccccc
Confidence            9999997664  4689999999999999999999999999998654
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Back     alignment and structure
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Back     alignment and structure
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Back     alignment and structure
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Back     alignment and structure
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Back     alignment and structure
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Back     alignment and structure
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Back     alignment and structure
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Back     alignment and structure
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Back     alignment and structure
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Back     alignment and structure
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 Back     alignment and structure
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Back     alignment and structure
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* Back     alignment and structure
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 Back     alignment and structure
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} Back     alignment and structure
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A Back     alignment and structure
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 Back     alignment and structure
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 Back     alignment and structure
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Back     alignment and structure
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A Back     alignment and structure
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Back     alignment and structure
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Back     alignment and structure
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 Back     alignment and structure
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 212
d3c5wc1288 d.159.1.3 (C:6-293) Protein phosphatase 2A catalyt 2e-52
d1auia_ 473 d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calc 2e-44
d1jk7a_294 d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human 4e-42
d1s95a_324 d.159.1.3 (A:) Serine/threonine protein phosphatas 5e-41
d1g5ba_219 d.159.1.3 (A:) lambda ser/thr protein phosphatase 9e-06
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 288 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (426), Expect = 2e-52
 Identities = 106/164 (64%), Positives = 118/164 (71%), Gaps = 24/164 (14%)

Query: 11  TTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLA 70
           T +LD+ I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL 
Sbjct: 2   TKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLM 61

Query: 71  ELFQIGGK------------------------LLVALKVRYPQRITILRGNHESRQITQV 106
           ELF+IGGK                        LLVALKVRY +RITILRGNHESRQITQV
Sbjct: 62  ELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQV 121

Query: 107 YGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCP 150
           YGFYDECLRKYGNAN+WK FTDLFDY PLTAL      C+ G  
Sbjct: 122 YGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGL 165
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Length = 473 Back     information, alignment and structure
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Length = 294 Back     information, alignment and structure
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 Back     information, alignment and structure
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Length = 219 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query212
d3c5wc1288 Protein phosphatase 2A catalytic subunit alpha iso 100.0
d1jk7a_294 Protein phosphatase-1 (PP-1) {Human (Homo sapiens) 100.0
d1auia_ 473 Protein phosphatase-2B (PP-2B, calcineurin A subun 100.0
d1s95a_324 Serine/threonine protein phosphatase 5, PP5 {Human 100.0
d1g5ba_219 lambda ser/thr protein phosphatase {Bacteriophage 99.29
d1nnwa_251 Hypothetical protein PF1291 {Archaeon Pyrococcus f 98.66
d1uf3a_228 Hypothetical protein TT1561 {Thermus thermophilus 97.37
d1su1a_184 Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 97.3
d1s3la_165 Putative phosphodiesterase MJ0936 {Methanococcus j 96.92
d3ck2a1173 Uncharacterized protein SP1879 {Streptococcus pneu 96.78
d2yvta1257 Uncharacterized protein Aq_1956 {Aquifex aeolicus 95.6
d2a22a1193 Vacuolar protein sorting 29, VPS29 {Cryptosporidiu 93.97
d1z2wa1182 Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus 92.98
d1xm7a_188 Hypothetical protein aq_1666 {Aquifex aeolicus [Ta 88.92
d1ii7a_ 333 Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 81.5
d2hy1a1256 Rv0805 cyclic nucleotide phosphodiesterase {Mycoba 80.6
d3d03a1271 Glycerophosphodiesterase GpdQ {Enterobacter aeroge 80.07
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-47  Score=333.50  Aligned_cols=176  Identities=61%  Similarity=0.907  Sum_probs=166.8

Q ss_pred             cCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCceeEeccCCCCHHHHHHHHHHcCc-------------
Q 028167           12 TDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGK-------------   78 (212)
Q Consensus        12 ~~l~~~i~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~ll~i~~pi~VvGDiHG~~~dL~~if~~~G~-------------   78 (212)
                      .++|++|++++++++++++++.+||++|+++|++||+++++++|++|||||||||+||+++|+..|.             
T Consensus         3 ~~~d~~i~~~~~~~~l~~~~i~~L~~~a~~il~~e~~l~~i~~pv~VvGDlHG~~~DL~~if~~~g~p~~~~ylFLGDYV   82 (288)
T d3c5wc1           3 KELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYV   82 (288)
T ss_dssp             HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTTSCEEECSCCC
T ss_pred             hHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCEEEeCCCeEEEeeCCCCHHHHHHHHHhcCCCccceEEecCccc
Confidence            4799999999999999999999999999999999999999999999999999999999999998765             


Q ss_pred             -----------hhhhhhhhcCCcEEEecccccccchhhhcccHHHHHHhhCChhhHHHHHhhhcccccccccCceEEEEc
Q 028167           79 -----------LLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMV  147 (212)
Q Consensus        79 -----------ll~~lKl~~P~~v~lLRGNHE~~~~n~~ygF~~e~~~kyg~~~~~~~~~~~F~~LPlaavi~~~ilc~H  147 (212)
                                 +++++|+.||++|++||||||++.+|..|||++||.++||.+++|+.++++|++||+||+++++++|+|
T Consensus        83 DRG~~slEvl~lL~alKi~~P~~v~lLRGNHE~~~~~~~~gF~~E~~~ky~~~~i~~~~~~~F~~LPlaaiI~~~i~cvH  162 (288)
T d3c5wc1          83 DRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLH  162 (288)
T ss_dssp             CSSSSHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHHSSSHHHHHHHHHHTTSCSEEEETTTEEEES
T ss_pred             CCCCcceeHHHHHHHHHhhCCCeEEEeccCCcccccccccCcchhhhhhcCcHHHHHHHHHHHhhccceEEecCeEEEec
Confidence                       899999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             CCCccccccccchhhhhhhccCCCCCccccccccccceecCc
Q 028167          148 GCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGV  189 (212)
Q Consensus       148 GG~~~~~~~~~~~~i~~i~R~~~p~~~gi~~dll~~~~~~~~  189 (212)
                      ||+++.  ..+++++++++|+.+.++.++++|++|..|....
T Consensus       163 GGi~~~--~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~  202 (288)
T d3c5wc1         163 GGLSPS--IDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRG  202 (288)
T ss_dssp             SCCCTT--CSSHHHHHHSCCSSSCCSSSHHHHHHHCEECSSS
T ss_pred             ccccCC--ccchhhHhhcccccCCCccccccccccCCcccCC
Confidence            997665  4568999999999999999999999999886544
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Back     information, alignment and structure
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Back     information, alignment and structure
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Back     information, alignment and structure