Citrus Sinensis ID: 028215

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210--
Protein Sequence
MDCCKFLLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRYRNRYEIM
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHcccHHHHccccccccccccccccccccccEEEEEEEEccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccEEEEEEccccccccHHHHHHHccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHcccccccEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccccccEEEcccccccccccccccccccccccEEEEEEEccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccHHHHccHHHHHHcccccccccHHHHHHHHHHccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHccccccHEEEEccccccccc
Coil and Loop (DISEMBL)
MDCCKFLLVISLHSFLISHAFSQSVIQIFpgriefagdrkiragdelycdswrfsvetndagewdsvpsRCVEFVQKYMtgehylsdseivsgyslkhaksanvsagdgkdawvfdidetllsnlpyyaahgfgseifnedAFDEWVDlakapalpasLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRYRNRYEIM
Flexible Loop (DISEMBL)
MDCCKFLLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETndagewdsvpSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSAnvsagdgkdAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTgrnefqrntteknllfagysdwkklFLRYRNRYEIM
Low Complexity Region (SEG)
MDCCKFLLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRYRNRYEIM
Disordered region (IsUnstruct)
**CCKFLLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRYRNRY***
Disordered Region (DISOPRED)
*DCCKFLLVISLHSFLISHAFSQSVI*********************YCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRYR******
Disordered Region (DISEMBL)
MDCCKFLLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRYRNRYEIM
Disordered Region (DISPRO)
MDCCKFLLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKI*AGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRY*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDCCKFLLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRYRNRYEIM
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	212	2.2.26 [Sep-21-2011]
P27061	255	Acid phosphatase 1 OS=Sol	N/A	no	0.844	0.701	0.460	6e-45
P10742	291	Stem 31 kDa glycoprotein	no	no	0.877	0.639	0.400	5e-34
P15490	254	Stem 28 kDa glycoprotein	no	no	0.877	0.732	0.400	6e-34
P10743	254	Stem 31 kDa glycoprotein	no	no	0.806	0.673	0.402	1e-30
O82122	265	Vegetative storage protei	no	no	0.731	0.584	0.360	1e-23
O49195	270	Vegetative storage protei	no	no	0.731	0.574	0.341	1e-21
O04195	283	Uncharacterized protein A	no	no	0.660	0.494	0.254	1e-05

>sp|P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1

 Score =  180 bits (457), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 129/189 (68%), Gaps = 10/189 (5%)

Query: 16  LISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFV 75
           L SH F + +I  +P       ++++R  DEL C +WRF VETN+   W ++P  C ++V
Sbjct: 19  LNSHVFPRPLIIEYP-------EKQLR--DELKCTTWRFVVETNNLSPWKTIPEECADYV 69

Query: 76  QKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGS 135
           ++YM G  Y  + + VS  + ++AKS ++   DG+D W+FD+DETLLSNLPYY+ H +G 
Sbjct: 70  KEYMVGPGYKMEIDRVSDEAGEYAKSVDL-GDDGRDVWIFDVDETLLSNLPYYSDHRYGL 128

Query: 136 EIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGY 195
           E+F++  FD+WV+   APAL +SL  Y+E+ +LGFK+FLLTGR+E  R+ T +NL+ AG+
Sbjct: 129 EVFDDVEFDKWVENGTAPALGSSLKLYQEVLKLGFKVFLLTGRSERHRSVTVENLMNAGF 188

Query: 196 SDWKKLFLR 204
            DW KL LR
Sbjct: 189 HDWHKLILR 197

Solanum lycopersicum (taxid: 4081)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2

>sp|P10742|S25K_SOYBN Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2 SV=2

 Score =  144 bits (363), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 118/202 (58%), Gaps = 16/202 (7%)

Query: 7   LLVISLHSFLIS---HAFSQSVIQIFPGRIEFA-GDRKIRAGDELYCDSWRFSVETNDAG 62
           +LV  + + L++   HA+      +FP R+    G R      E+ C SWR +VE ++  
Sbjct: 2   VLVFFVATILVAWQCHAYD-----MFPLRMNTGYGART----PEVKCASWRLAVEAHNIF 52

Query: 63  EWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLL 122
            ++++P  CVE  ++Y+ GE Y SDS+ V+  +  +A+   V     KD +VF ID T+L
Sbjct: 53  GFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEVHP---KDTFVFSIDGTVL 109

Query: 123 SNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ 182
           SN+PYY  HG+G E FN   +DEWV+   APALP +L  Y +L  LGFKI  L+GR   +
Sbjct: 110 SNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDK 169

Query: 183 RNTTEKNLLFAGYSDWKKLFLR 204
           +  TE NL  AGY  W+KL L+
Sbjct: 170 QAVTEANLKKAGYHTWEKLILK 191

May function as somatic storage protein during early seedling development.

Glycine max (taxid: 3847)

>sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1

 Score =  144 bits (362), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 118/202 (58%), Gaps = 16/202 (7%)

Query: 7   LLVISLHSFLIS---HAFSQSVIQIFPGRIEFA-GDRKIRAGDELYCDSWRFSVETNDAG 62
           +LV  + + L++   HA+      +FP R+    G R      E+ C SWR +VE ++  
Sbjct: 5   VLVFFVATILVAWQCHAYD-----MFPLRMNTGYGART----PEVKCASWRLAVEAHNIF 55

Query: 63  EWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLL 122
            ++++P  CVE  ++Y+ GE Y SDS+ V+  +  +A+   V     KD +VF ID T+L
Sbjct: 56  GFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEVHP---KDTFVFSIDGTVL 112

Query: 123 SNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ 182
           SN+PYY  HG+G E FN   +DEWV+   APALP +L  Y +L  LGFKI  L+GR   +
Sbjct: 113 SNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDK 172

Query: 183 RNTTEKNLLFAGYSDWKKLFLR 204
           +  TE NL  AGY  W+KL L+
Sbjct: 173 QAVTEANLKKAGYHTWEKLILK 194

May function as somatic storage protein during early seedling development.

Glycine max (taxid: 3847)

>sp|P10743|VSPB_SOYBN Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1

 Score =  132 bits (333), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 8/179 (4%)

Query: 27  QIFPGRIEFA-GDRKIRAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYL 85
           Q FP R++   G+R      E+ C S+R +VE ++   + ++P  CVE  + Y+ GE + 
Sbjct: 24  QRFPLRMKTGYGER----SSEVKCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFR 79

Query: 86  SDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDE 145
           SDS+ V+  +  +A    V   D    ++F ID T+LSN+PYY  HG+G E FNE  +DE
Sbjct: 80  SDSKTVNQQAFFYASEREVHHND---IFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYDE 136

Query: 146 WVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
           WV+   APALP +L  Y +L  LGFKI  L+GR   +   TE NL  AG+  W++L L+
Sbjct: 137 WVNKGDAPALPETLKNYNKLLSLGFKIVFLSGRYLDKMAVTEANLKKAGFHTWEQLILK 195

May function as somatic storage protein during early seedling development.

Glycine max (taxid: 3847)

>sp|O82122|VSP2_ARATH Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1 SV=1

 Score =  109 bits (272), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 95/158 (60%), Gaps = 3/158 (1%)

Query: 49  CDSWRFSVETNDAGEWDSVPSRCVEFVQKYM-TGEHYLSDSEIVSGYSLKHAKSANVSAG 107
           C SW   VET++  ++D+VP+ C ++V+ Y+ T + Y  DS+ V   +  +AK   +   
Sbjct: 52  CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALK-N 110

Query: 108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDL-AKAPALPASLTFYKELK 166
           D  + W+FD+D+TLLS++PYYA +G+G+E  +  A+  W+   A  P LP +L  Y+ + 
Sbjct: 111 DTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNII 170

Query: 167 QLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
           +LG +  +L+ R +  +N T  NL  AG + WK L L+
Sbjct: 171 ELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILK 208

May function as somatic storage protein during early seedling development.

Arabidopsis thaliana (taxid: 3702)

>sp|O49195|VSP1_ARATH Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2 SV=2

 Score =  103 bits (256), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 93/158 (58%), Gaps = 3/158 (1%)

Query: 49  CDSWRFSVETNDAGEWDSVPSRCVEFVQKYM-TGEHYLSDSEIVSGYSLKHAKSANVSAG 107
           C SW   VET++   +D+VP+ C  +V+ Y+ T + Y  DS+ V+  +  +AK   +   
Sbjct: 57  CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALK-N 115

Query: 108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKA-PALPASLTFYKELK 166
           D  + W+FD+D+TLLS++PYYA +G+G+E     A+  W++  ++ P LP +L  Y+ L 
Sbjct: 116 DTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLL 175

Query: 167 QLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
           +LG +  +++ R +     T +NL   G + WK L L+
Sbjct: 176 ELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILK 213

May function as somatic storage protein during early seedling development.

Arabidopsis thaliana (taxid: 3702)

>sp|O04195|Y2992_ARATH Uncharacterized protein At2g39920 OS=Arabidopsis thaliana GN=At2g39920 PE=2 SV=2

 Score = 50.1 bits (118), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 17/157 (10%)

Query: 48  YCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAG 107
           YC       + N   E   +P  C +     +    YL +       +L + ++      
Sbjct: 87  YCKILSLHSQLNSLDEESELPLLCRDVALHRIKQGIYLRELNFTIQMALTYFQTIK-PMN 145

Query: 108 DGKDAWVFDIDET-LLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELK 166
           D  D  V DID+T LL    YY                ++++ AK       L  Y +L+
Sbjct: 146 DNCDVVVIDIDDTNLLEQDSYYM---------------KYIEEAKHQKSILILALYSKLR 190

Query: 167 QLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL 203
             G+ + LL+ R E +RN T + L   GYSDW  L +
Sbjct: 191 SQGYSMVLLSRRPETERNATIEQLKSRGYSDWSHLIM 227

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	212
225445051	257	PREDICTED: acid phosphatase 1-like [Viti	0.867	0.715	0.643	6e-63
255546271	251	Acid phosphatase 1 precursor, putative [	0.825	0.697	0.654	3e-62
118481785	247	unknown [Populus trichocarpa]	0.745	0.639	0.698	7e-61
224091359	214	predicted protein [Populus trichocarpa]	0.735	0.728	0.713	1e-60
357500937	252	Acid phosphatase-like protein [Medicago	0.735	0.619	0.643	5e-56
388492444	252	unknown [Medicago truncatula]	0.735	0.619	0.643	7e-56
356520832	253	PREDICTED: acid phosphatase 1-like [Glyc	0.882	0.739	0.542	2e-50
53792717	264	putative Acid phosphatase precursor 1 [O	0.754	0.606	0.633	6e-50
125555731	265	hypothetical protein OsI_23372 [Oryza sa	0.754	0.603	0.633	6e-50
449487985	264	PREDICTED: acid phosphatase 1-like [Cucu	0.839	0.674	0.524	2e-49

>gi|225445051|ref|XP_002283385.1| PREDICTED: acid phosphatase 1-like [Vitis vinifera]

 Score =  246 bits (627), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 121/188 (64%), Positives = 146/188 (77%), Gaps = 4/188 (2%)

Query: 19  HAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKY 78
            AFS S+I+I P R       K+   D L+CDSWRF+VETNDAG W SVP RCV++V+ Y
Sbjct: 18  RAFSDSLIRITPDR---RSSTKLSRDDVLFCDSWRFTVETNDAGVWVSVPDRCVQWVKDY 74

Query: 79  MTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIF 138
           MTG+ Y SDSE  +  SL  AK+  + AGDGKD WVFDIDETLLSNLPYYAAHGFGSE F
Sbjct: 75  MTGDRYRSDSEFAADDSLSFAKTVQI-AGDGKDVWVFDIDETLLSNLPYYAAHGFGSEAF 133

Query: 139 NEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW 198
           ++  FDEWV+LA+APAL ASL  Y+E++QLGFKI L+TGR E QRN TEKNL++AGYS+W
Sbjct: 134 DDSTFDEWVNLAEAPALQASLRLYREVEQLGFKIVLITGRIEPQRNVTEKNLVYAGYSNW 193

Query: 199 KKLFLRYR 206
           ++LFLR R
Sbjct: 194 ERLFLRGR 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546271|ref|XP_002514195.1| Acid phosphatase 1 precursor, putative [Ricinus communis] gi|223546651|gb|EEF48149.1| Acid phosphatase 1 precursor, putative [Ricinus communis]

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 10/185 (5%)

Query: 20  AFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYM 79
             SQS+IQI   R            D+LYCDSWR SVETN+AG W +VPSRC  +VQ+YM
Sbjct: 19  TLSQSIIQIPTAR---------SKDDDLYCDSWRLSVETNNAGYWVNVPSRCESYVQQYM 69

Query: 80  TGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFN 139
           T + +LSD E+V+  SL  AKS N++ GDGKDAWVFDIDETLLSNLPYY  HGFGS+ F+
Sbjct: 70  TSDRFLSDFEVVASDSLSFAKSVNIT-GDGKDAWVFDIDETLLSNLPYYEVHGFGSQPFD 128

Query: 140 EDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK 199
           E+AFD+WVDLA+APAL ASL  YKELK LGF IFLLTGR+E QR+ T K+LLFAGYSDW+
Sbjct: 129 ENAFDQWVDLAEAPALQASLNLYKELKHLGFTIFLLTGRSENQRDATVKDLLFAGYSDWE 188

Query: 200 KLFLR 204
            LFLR
Sbjct: 189 GLFLR 193

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481785|gb|ABK92831.1| unknown [Populus trichocarpa]

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 111/159 (69%), Positives = 130/159 (81%), Gaps = 1/159 (0%)

Query: 46  ELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVS 105
           ++YC+ WRFSVETND G WD VPSRCV +VQ YMTG+ Y SDSE+ + Y+L  AK+  + 
Sbjct: 32  DVYCNGWRFSVETNDVGYWDHVPSRCVSYVQDYMTGDGYRSDSEVAASYALGFAKTVEI- 90

Query: 106 AGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKEL 165
           AGDGKDAWVFD+DETLLSNLPYYA HGFGSE F+E +FDEWVDLA+APAL ASL  YKEL
Sbjct: 91  AGDGKDAWVFDVDETLLSNLPYYAVHGFGSEPFDELSFDEWVDLAEAPALQASLNLYKEL 150

Query: 166 KQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
           KQLGF +F+LTGR+E QRN T KNL   GYSDW++L LR
Sbjct: 151 KQLGFTVFMLTGRSEHQRNATAKNLQLEGYSDWERLILR 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091359|ref|XP_002309231.1| predicted protein [Populus trichocarpa] gi|222855207|gb|EEE92754.1| predicted protein [Populus trichocarpa]

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 112/157 (71%), Positives = 128/157 (81%), Gaps = 1/157 (0%)

Query: 48  YCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAG 107
           YC+ WRFSVETND G WD VPSRCV +VQ YMTG+ Y SDSE+ + Y+L  AK+  + AG
Sbjct: 1   YCNGWRFSVETNDVGYWDHVPSRCVSYVQDYMTGDGYRSDSEVAASYALGFAKTVEI-AG 59

Query: 108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQ 167
           DGKDAWVFD+DETLLSNLPYYA HGFGSE F+E +FDEWVDLAKAPAL ASL  YKELKQ
Sbjct: 60  DGKDAWVFDVDETLLSNLPYYAVHGFGSEPFDELSFDEWVDLAKAPALQASLNLYKELKQ 119

Query: 168 LGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
           LGF +F+LTGR+E QRN T KNL   GYSDW++L LR
Sbjct: 120 LGFTVFMLTGRSEHQRNATAKNLQLEGYSDWERLILR 156

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357500937|ref|XP_003620757.1| Acid phosphatase-like protein [Medicago truncatula] gi|355495772|gb|AES76975.1| Acid phosphatase-like protein [Medicago truncatula]

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 101/157 (64%), Positives = 126/157 (80%), Gaps = 1/157 (0%)

Query: 48  YCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAG 107
           YCDSWR +VETN+ G+W  +P+RCVE V +YM GE Y SD E+V  +S +  K   V  G
Sbjct: 39  YCDSWRLAVETNNVGQWKQIPARCVESVAEYMIGEKYESDCEVVGKFSAEFVKGVTV-GG 97

Query: 108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQ 167
           DG+DAWVFDIDETLLSN+PYY   GFGS+IFNE +F++WV+LA APALPASL+FY++L++
Sbjct: 98  DGRDAWVFDIDETLLSNVPYYQDVGFGSKIFNETSFNDWVNLADAPALPASLSFYRKLQE 157

Query: 168 LGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
           LGF IFLLTGR+E QRN TE NLLFAGY +W++L LR
Sbjct: 158 LGFTIFLLTGRSEHQRNVTEANLLFAGYRNWERLILR 194

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492444|gb|AFK34288.1| unknown [Medicago truncatula]

 Score =  222 bits (566), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 101/157 (64%), Positives = 125/157 (79%), Gaps = 1/157 (0%)

Query: 48  YCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAG 107
           YCDSWR +VETN  G+W  +P+RCVE V +YM GE Y SD E+V  +S +  K   V  G
Sbjct: 39  YCDSWRLAVETNSVGQWKQIPARCVESVAEYMIGEKYESDCEVVGKFSAEFVKGVTV-GG 97

Query: 108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQ 167
           DG+DAWVFDIDETLLSN+PYY   GFGS+IFNE +F++WV+LA APALPASL+FY++L++
Sbjct: 98  DGRDAWVFDIDETLLSNVPYYQDVGFGSKIFNETSFNDWVNLADAPALPASLSFYRKLQE 157

Query: 168 LGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
           LGF IFLLTGR+E QRN TE NLLFAGY +W++L LR
Sbjct: 158 LGFTIFLLTGRSEHQRNVTEANLLFAGYRNWERLILR 194

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520832|ref|XP_003529064.1| PREDICTED: acid phosphatase 1-like [Glycine max]

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/199 (54%), Positives = 142/199 (71%), Gaps = 12/199 (6%)

Query: 6   FLLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWD 65
           FL+V+++ +    H  S++++++     E + D         YCDSW  +VETN+AG W+
Sbjct: 9   FLVVVAVST--SGHIHSEAILRLPSESEEISRD---------YCDSWMLAVETNNAGTWN 57

Query: 66  SVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNL 125
            VP+ CV+FV +Y+TG+ Y  D +++   S   AKS  + AGDG+DAWVFD+DETLLSN+
Sbjct: 58  RVPASCVDFVAEYITGDRYRRDCDVIRNLSAAFAKSVGL-AGDGRDAWVFDVDETLLSNV 116

Query: 126 PYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNT 185
           PYY   GFGSEIFNE +FD WVDLA APALPA L+ Y ELK+LGFKIF LTGR+EFQRN 
Sbjct: 117 PYYQGVGFGSEIFNETSFDNWVDLAAAPALPAILSLYNELKELGFKIFFLTGRSEFQRNA 176

Query: 186 TEKNLLFAGYSDWKKLFLR 204
           TE NLL +GY DW++L LR
Sbjct: 177 TETNLLLSGYRDWERLILR 195

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|53792717|dbj|BAD53728.1| putative Acid phosphatase precursor 1 [Oryza sativa Japonica Group] gi|53792982|dbj|BAD54156.1| putative Acid phosphatase precursor 1 [Oryza sativa Japonica Group] gi|215697405|dbj|BAG91399.1| unnamed protein product [Oryza sativa Japonica Group] gi|215765625|dbj|BAG87322.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 102/161 (63%), Positives = 120/161 (74%), Gaps = 1/161 (0%)

Query: 45  DELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANV 104
           DELYCD WR SVET +AG W ++P RC+EFV+ YM GE Y SDS + +  SL  A  A  
Sbjct: 46  DELYCDGWRLSVETGNAGPWTAIPPRCLEFVRAYMEGERYASDSAVAAADSLAFAARALA 105

Query: 105 SAGDG-KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYK 163
           S G G + AWVFD+DETLL+N PYYA +G+GS  FNE +FDEWVD+AKAPALPASL  Y 
Sbjct: 106 SGGGGARPAWVFDVDETLLTNAPYYAVNGWGSLEFNETSFDEWVDVAKAPALPASLKLYN 165

Query: 164 ELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
           EL+ LG  I LLTGR+EFQRN T+ NLLFAGY  W+KL LR
Sbjct: 166 ELQGLGIHIILLTGRSEFQRNATQVNLLFAGYHSWEKLILR 206

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125555731|gb|EAZ01337.1| hypothetical protein OsI_23372 [Oryza sativa Indica Group]

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 102/161 (63%), Positives = 120/161 (74%), Gaps = 1/161 (0%)

Query: 45  DELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANV 104
           DELYCD WR SVET +AG W ++P RC+EFV+ YM GE Y SDS + +  SL  A  A  
Sbjct: 47  DELYCDGWRLSVETGNAGPWTAIPPRCLEFVRAYMEGERYASDSAVAAADSLAFAARALA 106

Query: 105 SAGDG-KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYK 163
           S G G + AWVFD+DETLL+N PYYA +G+GS  FNE +FDEWVD+AKAPALPASL  Y 
Sbjct: 107 SGGGGARPAWVFDVDETLLTNAPYYAVNGWGSLEFNETSFDEWVDVAKAPALPASLKLYN 166

Query: 164 ELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
           EL+ LG  I LLTGR+EFQRN T+ NLLFAGY  W+KL LR
Sbjct: 167 ELQGLGIHIILLTGRSEFQRNATQVNLLFAGYHSWEKLILR 207

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487985|ref|XP_004157899.1| PREDICTED: acid phosphatase 1-like [Cucumis sativus]

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/185 (52%), Positives = 122/185 (65%), Gaps = 7/185 (3%)

Query: 21  FSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMT 80
            S ++++ +PG+        +RA     C+SW+F+VE N AG W SVP  C+ FV+ Y  
Sbjct: 28  LSTAMLRTYPGK------HIVRAKSNPRCESWKFAVEVNAAGSWKSVPGTCIAFVRDYFN 81

Query: 81  GEHYLSDSEIVSGYSLKHAKSANVSAGD-GKDAWVFDIDETLLSNLPYYAAHGFGSEIFN 139
            + YLSDS  V  YSL  A S   +  D G++AWVFD+DETLLSNLPYY  +G+GSE +N
Sbjct: 82  SDRYLSDSRTVVNYSLSFANSVKFNRKDKGRNAWVFDVDETLLSNLPYYRVNGYGSEAYN 141

Query: 140 EDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK 199
             AF+EWV+   AP LP SL  YK+LK LGFKIFLLTGR E QRN T++NLL AGY  W 
Sbjct: 142 NTAFNEWVNKGLAPPLPMSLRLYKKLKHLGFKIFLLTGRGESQRNVTQRNLLEAGYFGWD 201

Query: 200 KLFLR 204
           KL  R
Sbjct: 202 KLIFR 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	212
TAIR|locus:2118314	255	AT4G29260 [Arabidopsis thalian	0.75	0.623	0.556	3.3e-47
TAIR|locus:2176267	257	AT5G51260 [Arabidopsis thalian	0.910	0.750	0.462	4.4e-45
TAIR|locus:2118329	256	AT4G29270 [Arabidopsis thalian	0.75	0.621	0.506	8.4e-42
TAIR|locus:2117338	260	AT4G25150 [Arabidopsis thalian	0.924	0.753	0.444	6.8e-40
TAIR|locus:2172447	272	AT5G44020 [Arabidopsis thalian	0.740	0.577	0.462	1.7e-34
TAIR|locus:2024102	271	AT1G04040 [Arabidopsis thalian	0.740	0.579	0.412	1.3e-31
TAIR|locus:2184580	265	VSP2 "AT5G24770" [Arabidopsis	0.731	0.584	0.360	1.2e-24
TAIR|locus:2064128	251	AT2G38600 [Arabidopsis thalian	0.735	0.621	0.348	2e-24
TAIR|locus:2184585	270	VSP1 "AT5G24780" [Arabidopsis	0.929	0.729	0.307	8.7e-24
TIGR_CMR|CBU_0335	221	CBU_0335 "acid phosphatase, cl	0.636	0.610	0.309	1.3e-11

TAIR|locus:2118314 AT4G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 89/160 (55%), Positives = 115/160 (71%)

Query:    48 YCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAG 107
             YCDSWR + ETN+ G WD +PS CV+ V +Y+ G+ +LSD  ++  Y+L  AKS  +S G
Sbjct:    42 YCDSWRLAAETNNVGTWDLIPSICVDSVAEYLNGDQFLSDYSVIVDYALAFAKSVEIS-G 100

Query:   108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQ 167
             DGKD W+FDIDETLL+N+ YY AHG+GSE ++++ F EWV+   APA  ASL  Y  LK+
Sbjct:   101 DGKDVWIFDIDETLLTNIDYYKAHGYGSEPYDDNKFSEWVEQGTAPAFDASLRLYNALKK 160

Query:   168 LGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRYRN 207
             LGF I LLTGR+E QR +TE NL  AGYS W++L LR  N
Sbjct:   161 LGFTIILLTGRDEHQRTSTETNLRDAGYSGWERLLLRGPN 200

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2176267 AT5G51260 [Arabidopsis thaliana (taxid:3702)]

 Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
 Identities = 92/199 (46%), Positives = 128/199 (64%)

Query:     6 FLLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWD 65
             FL+V+SL     + AFS S+++ +P  IE    +       L+C +WRF+ E N+   W 
Sbjct:     7 FLVVVSL----FTSAFSDSILE-YPSEIESRHKKAAEEDVNLHCTTWRFAAEMNNLAPWK 61

Query:    66 SVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNL 125
             ++P  C ++V+ Y+ G+ YL+D E VS  +L  A+S   S GDGKD W+FDIDETLLSNL
Sbjct:    62 TIPVECADYVKDYVMGKGYLTDLERVSEEALIFARSIEFS-GDGKDIWIFDIDETLLSNL 120

Query:   126 PYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNT 185
             PYY  HGFG E+F+   FD+WV+   APA+  SL  Y+ +  LG+K+FLLTGR E  R  
Sbjct:   121 PYYIDHGFGLELFDHSEFDKWVERGVAPAIAPSLKLYQRVLDLGYKVFLLTGRKESHRLV 180

Query:   186 TEKNLLFAGYSDWKKLFLR 204
             T +NL+ AG+ +W KL LR
Sbjct:   181 TVENLINAGFQNWDKLILR 199

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2118329 AT4G29270 [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 81/160 (50%), Positives = 111/160 (69%)

Query:    48 YCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAG 107
             YC+SWR + ETN+ G W  +PS+C  +++ Y+ G  +  D ++V+ Y++ +AK+  V  G
Sbjct:    43 YCESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYDVVASYAIDYAKTVKVG-G 101

Query:   108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQ 167
             DGKDAWVFDIDETLLSN+ YY A+G+GSE ++   ++E V+  K P   ASL  YK LK+
Sbjct:   102 DGKDAWVFDIDETLLSNIEYYKANGYGSEPYDSIKYNEVVEKGKDPGYDASLRLYKALKK 161

Query:   168 LGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRYRN 207
             LGF I LLTGR+E  R+ TEKNL  AGY  W +L LR +N
Sbjct:   162 LGFTIILLTGRDEGHRSVTEKNLRDAGYFGWNRLLLRGQN 201

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2117338 AT4G25150 [Arabidopsis thaliana (taxid:3702)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 88/198 (44%), Positives = 119/198 (60%)

Query:     7 LLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDS 66
             L++ SL     S+  S S +   P   E    + I     L+C SWRF+ ETN+   W +
Sbjct:     7 LILFSLIPLAFSNENSSSYLIARPLIFE-TQLKNINDNVNLHCTSWRFAAETNNLAPWKT 65

Query:    67 VPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLP 126
             +P+ C ++V+ Y+ GE Y+ D E VS  +  +A S   S GDGKD W+FDIDETLLSNLP
Sbjct:    66 IPAECADYVKDYLMGEGYVVDVERVSEEAKVYASSFE-SNGDGKDIWIFDIDETLLSNLP 124

Query:   127 YYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTT 186
             YY  HG G E+F+   FD WV+   APA+  SL  Y+++  LG+K+ LLTGR E  R  T
Sbjct:   125 YYMEHGCGLEVFDHSKFDMWVEKGIAPAIAPSLKLYQKVIHLGYKVILLTGRRENHRVIT 184

Query:   187 EKNLLFAGYSDWKKLFLR 204
              +NL  AG+ +W KL LR
Sbjct:   185 VENLRNAGFHNWDKLILR 202

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2172447 AT5G44020 [Arabidopsis thaliana (taxid:3702)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 74/160 (46%), Positives = 99/160 (61%)

Query:    48 YCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSE-IVSGYSLKHAKSA-NVS 105
             YC+SWR +VE N+  ++  VP  CV FVQKYMT   Y  D E  V    L   K+     
Sbjct:    55 YCESWRVNVELNNIRDFKVVPQECVWFVQKYMTSSQYEDDVERAVDEAILYLGKTCCEKK 114

Query:   106 AGDGKDAWVFDIDETLLSNLPYYAAHG-FGSEIFNEDAFDEWVDLAKAPALPASLTFYKE 164
               DG DAW+FDID+TLLS +PY+ ++G FG E  N   F+EW +  KAPA+P  +  Y E
Sbjct:   115 TCDGMDAWIFDIDDTLLSTIPYHKSNGCFGGEQLNTTKFEEWQNSGKAPAVPHMVKLYHE 174

Query:   165 LKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
             +++ GFKIFL++ R E+ R+ T +NL+ AGY  W  L LR
Sbjct:   175 IRERGFKIFLISSRKEYLRSATVENLIEAGYHSWSNLLLR 214

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2024102 AT1G04040 [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 66/160 (41%), Positives = 94/160 (58%)

Query:    48 YCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKS--ANVS 105
             YC+SWR +VE ++  ++D VP  CV  ++ YMT   Y  D        + H  S   + S
Sbjct:    54 YCESWRINVEVHNIRKFDVVPQECVSHIKDYMTSSQYKDDVARTVDEVILHFGSMCCSKS 113

Query:   106 AGDGKDAWVFDIDETLLSNLPYYAAHGF-GSEIFNEDAFDEWVDLAKAPALPASLTFYKE 164
               DG DAW+FDID+TLLS +PY+  +GF G E  N   F++W+   KAPA+P     Y +
Sbjct:   114 KCDGMDAWIFDIDDTLLSTIPYHKKNGFFGGEKLNSTKFEDWIQKKKAPAVPHMKKLYHD 173

Query:   165 LKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
             +++ G KIFL++ R E+ R+ T  NL+ AGY  W  L LR
Sbjct:   174 IRERGIKIFLISSRKEYLRSATVDNLIQAGYYGWSNLMLR 213

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2184580 VSP2 "AT5G24770" [Arabidopsis thaliana (taxid:3702)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/158 (36%), Positives = 95/158 (60%)

Query:    49 CDSWRFSVETNDAGEWDSVPSRCVEFVQKYM-TGEHYLSDSEIVSGYSLKHAKSANVSAG 107
             C SW   VET++  ++D+VP+ C ++V+ Y+ T + Y  DS+ V   +  +AK   +   
Sbjct:    52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALK-N 110

Query:   108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDL-AKAPALPASLTFYKELK 166
             D  + W+FD+D+TLLS++PYYA +G+G+E  +  A+  W+   A  P LP +L  Y+ + 
Sbjct:   111 DTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNII 170

Query:   167 QLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
             +LG +  +L+ R +  +N T  NL  AG + WK L L+
Sbjct:   171 ELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILK 208

GO:0003993 "acid phosphatase activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0009753 "response to jasmonic acid stimulus" evidence=TAS

GO:0042538 "hyperosmotic salinity response" evidence=IGI

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0046688 "response to copper ion" evidence=IEP

GO:0009625 "response to insect" evidence=IEP

GO:0005773 "vacuole" evidence=IDA

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0002213 "defense response to insect" evidence=IDA

TAIR|locus:2064128 AT2G38600 [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 55/158 (34%), Positives = 90/158 (56%)

Query:    48 YCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAG 107
             YC SWR +VETN+   W  VP +C+ +V+ YM    Y  D ++     +K   +  +  G
Sbjct:    37 YCLSWRLAVETNNVRAWRIVPLQCLRYVEVYMLAGQYDRDVQLTVD-QIKVYLNEIILPG 95

Query:   108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQ 167
             DG DAW+ D+D+T  SN+ YY    +G + ++   F  W    ++PA+   L  + +L +
Sbjct:    96 DGMDAWILDVDDTCFSNVFYYRLKRYGCDPYDPTGFRTWAMKGESPAIQPVLELFYKLIE 155

Query:   168 LGFKIFLLTGRNEFQ-RNTTEKNLLFAGYSDWKKLFLR 204
              GFK+FL+TGR+E   R  T +NL   G++ +++L +R
Sbjct:   156 TGFKVFLVTGRDEETLRQATLENLHNQGFTGYERLIMR 193

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

TAIR|locus:2184585 VSP1 "AT5G24780" [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 63/205 (30%), Positives = 112/205 (54%)

Query:     7 LLVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDEL---Y--CDSWRFSVETNDA 61
             LL+ +  S + S A    +I++      F  + ++   + L   Y  C SW   VET++ 
Sbjct:    10 LLLAATVSHVQSSASVPGLIELLESNTIFGNEAELLEKEGLSINYPNCRSWHLGVETSNI 69

Query:    62 GEWDSVPSRCVEFVQKYM-TGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDET 120
               +D+VP+ C  +V+ Y+ T + Y  DS+ V+  +  +AK   +   D  + W+FD+D+T
Sbjct:    70 INFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALK-NDTVNVWIFDLDDT 128

Query:   121 LLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKA-PALPASLTFYKELKQLGFKIFLLTGRN 179
             LLS++PYYA +G+G+E     A+  W++  ++ P LP +L  Y+ L +LG +  +++ R 
Sbjct:   129 LLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRW 188

Query:   180 EFQRNTTEKNLLFAGYSDWKKLFLR 204
             +     T +NL   G + WK L L+
Sbjct:   189 KKLSEVTVENLKAVGVTKWKHLILK 213

GO:0003993 "acid phosphatase activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP;TAS

GO:0008134 "transcription factor binding" evidence=IDA

GO:0006952 "defense response" evidence=IEP

GO:0005773 "vacuole" evidence=IDA

TIGR_CMR|CBU_0335 CBU_0335 "acid phosphatase, class B" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 44/142 (30%), Positives = 66/142 (46%)

Query:    73 EFVQKYMTGEHYLSDSEIV---SGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYA 129
             E +  + +GE+ +  S++      Y     +    ++   K A V DIDET LSN     
Sbjct:    36 EIIHYHESGEYDVDISKVTHLAKRYLADRIRENQHASHPKKLAMVLDIDETSLSNYSDIK 95

Query:   130 AHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN 189
                FG     +D  +   D    PA+  +L  Y+   Q G  +F +TGR E  R  T KN
Sbjct:    96 VLNFGGTFLQQDLAEADGD---DPAITPTLNLYRYAIQHGVAVFFITGRQEKYRTATIKN 152

Query:   190 LLFAGYSDWKKLFLRYRNRYEI 211
             L  AGYS W +L+++  N Y +
Sbjct:   153 LKTAGYSQWARLYMK-PNDYRL 173

GO:0003993 "acid phosphatase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!
3rd Layer	3.1.3.2	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	212
TIGR01675	229	TIGR01675, plant-AP, plant acid phosphatase	7e-65
pfam03767	213	pfam03767, Acid_phosphat_B, HAD superfamily, subfa	8e-63
TIGR01680	275	TIGR01680, Veg_Stor_Prot, vegetative storage prote	9e-42
TIGR01533	266	TIGR01533, lipo_e_P4, 5'-nucleotidase, lipoprotein	2e-12
COG2503	274	COG2503, COG2503, Predicted secreted acid phosphat	8e-07

>gnl|CDD|130736 TIGR01675, plant-AP, plant acid phosphatase

 Score =  199 bits (508), Expect = 7e-65
 Identities = 79/161 (49%), Positives = 107/161 (66%), Gaps = 1/161 (0%)

Query: 44  GDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSAN 103
            D  YC SWR  VETN+  +WD+VP+ C ++V+ YMT + Y  D + V   +  +AKS  
Sbjct: 12  IDYAYCRSWRLGVETNNIRDWDTVPAECKDYVEDYMTSKQYKRDVKRVVDEAYFYAKSLA 71

Query: 104 VSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYK 163
           +S GDG DAW+FD+D+TLLSN+PYY  HG+G+E  +  AF  W+    APALP  L  Y+
Sbjct: 72  LS-GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQ 130

Query: 164 ELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
           ++ +LG KIFLL+GR E  RN T  NL+ AG++ WK L LR
Sbjct: 131 KIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILR 171

This model represents a family of acid phosphatase from plants which are most closely related to the (so called) class B non-specific acid phosphatase OlpA (TIGR01533, which is believed to be a 5'-nucleotide phosphatase) and somewhat more distantly to another class B phosphatase, AphA (TIGR01672). Together these three clades define a subfamily (pfam03767) which corresponds to the IIIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. It has been reported that the best substrate for this enzyme that could be found was purine 5'-nucleoside phosphates. This is in concordance with the assignment of the H. influenzae hel protein (from TIGR01533) as a 5'-nucleotidase, however there is presently no other evidence to support this specific function for these plant phosphatases. Many genes from this family have been annotated as vegetative storage proteins due to their close homology with these earlier-characterized gene products which are highly expressed in leaves. There are significant differences however, including expression levels and distribution. The most important difference is the lack in authentic VSPs of the nucleophilic aspartate residue, which is instead replaced by serine, glycine or asparagine. Thus these proteins can not be expected to be active phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. Length = 229

>gnl|CDD|217719 pfam03767, Acid_phosphat_B, HAD superfamily, subfamily IIIB (Acid phosphatase)

 Score =  194 bits (494), Expect = 8e-63
 Identities = 77/155 (49%), Positives = 105/155 (67%), Gaps = 1/155 (0%)

Query: 50  DSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDG 109
            SWR +VETN+   + ++P+ CV++V+ YM G+ Y SDS+ V   +  +AK   +  GD 
Sbjct: 1   ASWRLAVETNNIRPFKTIPAECVDYVKDYMNGQQYSSDSKAVVDQAYNYAKERELH-GDK 59

Query: 110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLG 169
           KDA VFDIDET+LSN PYYA HG+G E F+ + FDEWV+  +APALP +L  Y  L +LG
Sbjct: 60  KDAVVFDIDETVLSNSPYYAYHGYGGEPFDPEKFDEWVNKGEAPALPGALELYNYLVELG 119

Query: 170 FKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR 204
            KIF ++GR+E  R  T +NL  AG+  W+KL LR
Sbjct: 120 VKIFFVSGRSEDLRAATVENLKKAGFHGWEKLILR 154

This family proteins includes acid phosphatases and a number of vegetative storage proteins. Length = 213

>gnl|CDD|130741 TIGR01680, Veg_Stor_Prot, vegetative storage protein

 Score =  142 bits (358), Expect = 9e-42
 Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 5/198 (2%)

Query: 8   LVISLHSFLISHAFSQSVIQIFPGRIEFAGDRKIRAGDELYCDSWRFSVETNDAGEWDSV 67
           LV  + + L++     +   +FP R+   G        E+ C SWR +VE ++   ++++
Sbjct: 3   LVFFVAAILVASQCHGAAFDMFPLRMN-TGYGAGARDPEVKCASWRLAVEAHNIFGFETI 61

Query: 68  PSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPY 127
           P  CV+   +Y+ GE Y SDS+ V+  +   A+   V     KD ++F+ID T LSN+PY
Sbjct: 62  PEECVDATAEYIEGEQYRSDSKTVNQQAYFFARDLEVHE---KDTFLFNIDGTALSNIPY 118

Query: 128 YAAHGFGSEIFNEDAFD-EWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTT 186
           Y  HG+GSE F+ + +D E+V+  +APALP +L  Y +L  LGFKI  L+GR + ++  T
Sbjct: 119 YKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT 178

Query: 187 EKNLLFAGYSDWKKLFLR 204
           E NL  AGY  W+KL L+
Sbjct: 179 EANLKKAGYHTWEKLILK 196

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. Length = 275

>gnl|CDD|233452 TIGR01533, lipo_e_P4, 5'-nucleotidase, lipoprotein e(P4) family

 Score = 63.7 bits (155), Expect = 2e-12
 Identities = 30/83 (36%), Positives = 46/83 (55%)

Query: 108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQ 167
           D K A V D+DET+L N PY       ++ F+ + +D+WV  A+A  +  +L F      
Sbjct: 73  DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS 132

Query: 168 LGFKIFLLTGRNEFQRNTTEKNL 190
            G KIF ++ R+E ++  T KNL
Sbjct: 133 KGVKIFYVSNRSEKEKAATLKNL 155

This model represents a set of bacterial lipoproteins belonging to a larger acid phosphatase family (pfam03767), which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles [Transport and binding proteins, Other, Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]. Length = 266

>gnl|CDD|225305 COG2503, COG2503, Predicted secreted acid phosphatase [General function prediction only]

 Score = 48.2 bits (115), Expect = 8e-07
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQ 167
             K A V D+DET+L N  Y       ++ F  + +D+WV   K+ A+P ++ F   +  
Sbjct: 77  GKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNS 136

Query: 168 LGFKIFLLTGRN-EFQRNTTEKNL 190
            G KIF ++ R+ E +++ T +NL
Sbjct: 137 NGGKIFYISNRDQENEKDGTIENL 160

Length = 274

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	212
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	100.0
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	100.0
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	100.0
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	99.9
COG2503	274	Predicted secreted acid phosphatase [General funct	99.82
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.64
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.51
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	99.45
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	99.02
PRK13288	214	pyrophosphatase PpaX; Provisional	98.96
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	98.94
PRK13226	229	phosphoglycolate phosphatase; Provisional	98.93
PRK13225	273	phosphoglycolate phosphatase; Provisional	98.93
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.91
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	98.91
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	98.89
COG0546	220	Gph Predicted phosphatases [General function predi	98.87
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	98.86
PRK14988	224	GMP/IMP nucleotidase; Provisional	98.85
PRK11587	218	putative phosphatase; Provisional	98.85
PHA02530	300	pseT polynucleotide kinase; Provisional	98.85
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	98.81
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	98.79
PRK13223	272	phosphoglycolate phosphatase; Provisional	98.79
PLN02575	381	haloacid dehalogenase-like hydrolase	98.79
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	98.77
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	98.77
PRK13222	226	phosphoglycolate phosphatase; Provisional	98.77
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	98.73
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.73
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	98.73
PLN02645	311	phosphoglycolate phosphatase	98.73
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	98.71
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	98.71
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	98.7
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	98.68
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.68
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	98.67
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	98.67
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.66
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	98.64
PRK10444	248	UMP phosphatase; Provisional	98.64
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	98.63
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	98.61
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.6
PLN02954	224	phosphoserine phosphatase	98.59
PRK01158	230	phosphoglycolate phosphatase; Provisional	98.57
PLN02940	382	riboflavin kinase	98.57
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	98.57
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.54
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	98.54
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.53
PRK10976	266	putative hydrolase; Provisional	98.53
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	98.53
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	98.52
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	98.52
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	98.51
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	98.51
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	98.5
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	98.5
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	98.49
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	98.48
PRK13582	205	thrH phosphoserine phosphatase; Provisional	98.48
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	98.45
PRK10513	270	sugar phosphate phosphatase; Provisional	98.45
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	98.43
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.42
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	98.41
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	98.41
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	98.41
PRK09449	224	dUMP phosphatase; Provisional	98.41
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	98.39
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	98.38
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.38
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	98.38
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	98.37
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	98.36
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	98.36
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	98.36
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.35
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	98.35
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	98.34
PTZ00174	247	phosphomannomutase; Provisional	98.34
COG3700	237	AphA Acid phosphatase (class B) [General function	98.33
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.32
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	98.31
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	98.29
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	98.29
PHA02597	197	30.2 hypothetical protein; Provisional	98.28
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	98.27
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	98.24
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.24
PLN02887	580	hydrolase family protein	98.24
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	98.24
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.22
PRK10563	221	6-phosphogluconate phosphatase; Provisional	98.22
PRK11590	211	hypothetical protein; Provisional	98.21
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	98.2
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	98.2
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	98.18
PRK06769	173	hypothetical protein; Validated	98.16
PRK10748	238	flavin mononucleotide phosphatase; Provisional	98.11
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	98.1
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.09
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	98.07
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	98.0
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	98.0
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	97.96
PRK11133	322	serB phosphoserine phosphatase; Provisional	97.93
PLN02423	245	phosphomannomutase	97.92
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	97.9
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	97.87
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	97.86
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.86
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	97.84
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	97.79
PRK08238	479	hypothetical protein; Validated	97.74
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	97.73
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	97.73
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	97.7
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	97.69
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	97.69
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	97.67
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	97.66
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.66
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	97.65
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	97.63
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	97.6
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	97.59
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	97.58
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	97.56
PLN03017	366	trehalose-phosphatase	97.54
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	97.51
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	97.47
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	97.42
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	97.4
KOG2116	738	consensus Protein involved in plasmid maintenance/	97.38
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	97.36
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	97.36
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	97.33
COG4996	164	Predicted phosphatase [General function prediction	97.3
COG4850	373	Uncharacterized conserved protein [Function unknow	97.3
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	97.22
PLN02811	220	hydrolase	97.18
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.16
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	97.15
PLN02151	354	trehalose-phosphatase	97.13
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	97.13
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	97.04
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	97.02
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	97.02
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	97.01
COG0241	181	HisB Histidinol phosphatase and related phosphatas	96.89
PLN02382	413	probable sucrose-phosphatase	96.78
COG5663	194	Uncharacterized conserved protein [Function unknow	96.74
PTZ00445	219	p36-lilke protein; Provisional	96.71
PLN02580	384	trehalose-phosphatase	96.65
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	96.54
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	96.51
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	96.4
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	96.17
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	96.12
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	95.8
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	95.65
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	95.4
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	95.2
COG4359	220	Uncharacterized conserved protein [Function unknow	95.05
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	94.67
KOG1618	389	consensus Predicted phosphatase [General function	94.63
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	92.91
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	92.61
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	92.39
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	91.9
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	89.98
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	89.69
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	89.38
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	88.55
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	87.47
PLN02177	497	glycerol-3-phosphate acyltransferase	86.52
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	84.06
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	83.7
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	83.2
PLN02499	498	glycerol-3-phosphate acyltransferase	83.18
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	82.79
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	82.34
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	82.22

>TIGR01675 plant-AP plant acid phosphatase

Probab=100.00  E-value=5.6e-53  Score=358.99  Aligned_cols=166  Identities=48%  Similarity=0.866  Sum_probs=160.9

Q ss_pred             cCCCCcCCchhhhhhhccccCccccCCchhhHHHHhhccCccccccHHHHHHHHHHHHhhccccCCCCCceEEEecCCCC
Q 028215           42 RAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETL  121 (212)
Q Consensus        42 ~~~~~~~c~sw~~~ve~nn~~~~~~vP~~C~~~v~~y~~~~~Y~~D~~~v~~~A~~y~~~~~~~~~~~~~avvfDIDgTL  121 (212)
                      .+.+++||.||||+||+||+++|++||++|++||++||+|+||.+|+++|+++|..|++++.+. +|+++|||||||+|+
T Consensus        10 ~~~~~~~c~swr~~ve~~n~~~~~~vp~~c~~~v~~Y~~~~~Y~~D~~~v~~~a~~y~~~~~~~-~dg~~A~V~DIDET~   88 (229)
T TIGR01675        10 LSIDYAYCRSWRLGVETNNIRDWDTVPAECKDYVEDYMTSKQYKRDVKRVVDEAYFYAKSLALS-GDGMDAWIFDVDDTL   88 (229)
T ss_pred             ccCCcCcchhhhhhhhhccccccccCcHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHhhcc-CCCCcEEEEcccccc
Confidence            5567999999999999999999999999999999999999999999999999999999999888 899999999999999


Q ss_pred             CCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeE
Q 028215          122 LSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKL  201 (212)
Q Consensus       122 ldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~L  201 (212)
                      |||.||+..++||+++|+++.|++|+..+++|++|++++++++|+++|++|+|+|||++.+++.|.+||+++||++|++|
T Consensus        89 LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~L  168 (229)
T TIGR01675        89 LSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHL  168 (229)
T ss_pred             ccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeecCCC
Q 028215          202 FLRYRNR  208 (212)
Q Consensus       202 ilr~~~~  208 (212)
                      +||+.++
T Consensus       169 iLR~~~d  175 (229)
T TIGR01675       169 ILRGLED  175 (229)
T ss_pred             eecCCCC
Confidence            9998544

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=100.00  E-value=5.9e-53  Score=364.97  Aligned_cols=164  Identities=41%  Similarity=0.772  Sum_probs=157.2

Q ss_pred             CCCCcCCchhhhhhhccccCccccCCchhhHHHHhhccCccccccHHHHHHHHHHHHhhccccCCCCCceEEEecCCCCC
Q 028215           43 AGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLL  122 (212)
Q Consensus        43 ~~~~~~c~sw~~~ve~nn~~~~~~vP~~C~~~v~~y~~~~~Y~~D~~~v~~~A~~y~~~~~~~~~~~~~avvfDIDgTLl  122 (212)
                      ..+.+||.|||++||+||+++|++||++|++||++||+||||++|++.|+++|+.|++++...   +++|||||||||++
T Consensus        37 ~~~~~~c~swr~~vE~~n~~~w~~vP~~C~~~v~~Y~~ggqY~~D~~~v~~~a~~y~~~~~~~---~~dA~V~DIDET~L  113 (275)
T TIGR01680        37 RDPEVKCASWRLAVEAHNIFGFETIPEECVDATAEYIEGEQYRSDSKTVNQQAYFFARDLEVH---EKDTFLFNIDGTAL  113 (275)
T ss_pred             cCCCCcccceeeeeeecccCCcccCcHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhCcCC---CCCEEEEECccccc
Confidence            467899999999999999999999999999999999999999999999999999999887653   58999999999999


Q ss_pred             CChhhHhhhcCCCCCCCHHHHH-HHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeE
Q 028215          123 SNLPYYAAHGFGSEIFNEDAFD-EWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKL  201 (212)
Q Consensus       123 dn~~~~~~~~~g~~~~~~~~~~-~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~L  201 (212)
                      ||.||+..++||+++|+++.|+ +|+..+++|++||+++|+++++++|++|+|+|||++.++++|++||+++||++|++|
T Consensus       114 sN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~L  193 (275)
T TIGR01680       114 SNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKL  193 (275)
T ss_pred             cCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCccee
Confidence            9999999999999999999999 999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeecCCCc
Q 028215          202 FLRYRNRY  209 (212)
Q Consensus       202 ilr~~~~~  209 (212)
                      +||+++|+
T Consensus       194 iLR~~~D~  201 (275)
T TIGR01680       194 ILKDPQDN  201 (275)
T ss_pred             eecCCCCC
Confidence            99987654

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=100.00  E-value=1.8e-38  Score=270.79  Aligned_cols=162  Identities=44%  Similarity=0.748  Sum_probs=141.8

Q ss_pred             cCCCCcCCchhhhhhhccccCccccCCchhhHHHHhhccCccccccHHHHHHHHHHHHhhccccCCCCCceEEEecCCCC
Q 028215           42 RAGDELYCDSWRFSVETNDAGEWDSVPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETL  121 (212)
Q Consensus        42 ~~~~~~~c~sw~~~ve~nn~~~~~~vP~~C~~~v~~y~~~~~Y~~D~~~v~~~A~~y~~~~~~~~~~~~~avvfDIDgTL  121 (212)
                      ......+|.||+++||+|| .+|.+  ++|+.++.+ |+++||.+|+++++.+|+.|++...+. +++++|||||||||+
T Consensus         9 ~~~~~~~c~s~~~~~e~~~-~~~~~--~~~~~~~~~-~~~~q~~~e~~a~~~~a~~~a~~~~~~-~~~~~avv~DIDeTv   83 (229)
T PF03767_consen    9 LSTAALYCASWRLAVETNN-ANWTV--AECVEYVAD-VTWGQYSAEYKALVDQAYNYAKSRLDE-ADKPPAVVFDIDETV   83 (229)
T ss_dssp             ---------TCCSSHHHHH-----H--HHHHHTTHH-HHHHHHEHHHHHHHHHHHHHHHHHHHH-HTSEEEEEEESBTTT
T ss_pred             hhHHHhhhhhccchhhhcc-hHHHH--HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHhc-cCCCcEEEEECCccc
Confidence            4457889999999999999 99955  999999999 999999999999999999999998877 689999999999999


Q ss_pred             CCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeE
Q 028215          122 LSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKL  201 (212)
Q Consensus       122 ldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~L  201 (212)
                      |+|.+|+..+.+++..|+++.|++|+..+.++++||+++|+++++++|++|+|+|||++.+++.|++||+++||+.|++|
T Consensus        84 Lsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l  163 (229)
T PF03767_consen   84 LSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHL  163 (229)
T ss_dssp             EEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCG
T ss_pred             ccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchh
Confidence            99999998888888889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeecCCC
Q 028215          202 FLRYRNR  208 (212)
Q Consensus       202 ilr~~~~  208 (212)
                      +||++++
T Consensus       164 ~lr~~~~  170 (229)
T PF03767_consen  164 ILRPDKD  170 (229)
T ss_dssp             EEEEESS
T ss_pred             ccccccc
Confidence            9998775

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=99.90  E-value=2e-23  Score=181.65  Aligned_cols=135  Identities=26%  Similarity=0.358  Sum_probs=120.6

Q ss_pred             hHHHHhhccCccccccHHHHHHHHHHHHhhcc-ccCCCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhc
Q 028215           72 VEFVQKYMTGEHYLSDSEIVSGYSLKHAKSAN-VSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLA  150 (212)
Q Consensus        72 ~~~v~~y~~~~~Y~~D~~~v~~~A~~y~~~~~-~~~~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~  150 (212)
                      ..-+..|.+++.|+.....+.+.|..++.+.. .. .++++|||||||||+++|.||+..+.+++.+|+++.|++|+...
T Consensus        37 ~~~~~w~q~S~Ey~al~~q~~n~A~~~~~~~~~~~-~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~  115 (266)
T TIGR01533        37 TMSVAWMQRSAEYKALYLQAYNLAKMRLDNNLKKV-KDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAA  115 (266)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcC
Confidence            45667889999999999988888888875543 33 46789999999999999999998888888899999999999999


Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC--CeEEeecCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW--KKLFLRYRN  207 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~--~~Lilr~~~  207 (212)
                      .++++||+.+++++|+++|++++|+|||++..++.|.++|+++|++.+  +++++|++.
T Consensus       116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~  174 (266)
T TIGR01533       116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK  174 (266)
T ss_pred             CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC
Confidence            999999999999999999999999999999999999999999999865  589999653

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=99.82  E-value=4.8e-20  Score=156.65  Aligned_cols=117  Identities=27%  Similarity=0.431  Sum_probs=101.6

Q ss_pred             cHHHHHHHHHHHHhh-----ccccCCCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHH
Q 028215           87 DSEIVSGYSLKHAKS-----ANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTF  161 (212)
Q Consensus        87 D~~~v~~~A~~y~~~-----~~~~~~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lel  161 (212)
                      +.+++.-|++.-++.     ..+. .++++|||+|||||+|||+||.......+.+|+|+.|++|+....+.++||+.||
T Consensus        52 E~~AL~~Q~yn~Ak~~~d~~~k~~-k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eF  130 (274)
T COG2503          52 EYQALYLQAYNSAKIALDTQAKKK-KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEF  130 (274)
T ss_pred             HHHHHHHHHhhhHHHHHHhhhccc-cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHH
Confidence            355677777766633     3444 5778899999999999999998887777889999999999999999999999999


Q ss_pred             HHHHHHCCCeEEEEcCCChhc-hHHHHHHHHHCCCCCC--CeEEee
Q 028215          162 YKELKQLGFKIFLLTGRNEFQ-RNTTEKNLLFAGYSDW--KKLFLR  204 (212)
Q Consensus       162 l~~Lk~~G~kI~~vTgR~~~~-~~~T~~nL~~~G~~~~--~~Lilr  204 (212)
                      +++.-++|.+|+|+|+|.... ...|+++|.+.|++.-  ++++|+
T Consensus       131 l~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk  176 (274)
T COG2503         131 LNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK  176 (274)
T ss_pred             HHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe
Confidence            999999999999999999876 8999999999999975  467765

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.64  E-value=1.2e-15  Score=130.98  Aligned_cols=98  Identities=20%  Similarity=0.207  Sum_probs=76.2

Q ss_pred             CCceEEEecCCCCCCChhh--HhhhcCC--CCCC--CHHHHHHHHHh--cCCCCChhHHHHHHHHHHCCCeEEEEcCCCh
Q 028215          109 GKDAWVFDIDETLLSNLPY--YAAHGFG--SEIF--NEDAFDEWVDL--AKAPALPASLTFYKELKQLGFKIFLLTGRNE  180 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~--~~~~~~g--~~~~--~~~~~~~wv~~--~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~  180 (212)
                      ++.+|+||||||++||+|+  +.++.|+  ...|  +++.|+.|...  ..+.|.||++++|++|+++|++|+++|||++
T Consensus        62 ~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~  141 (237)
T PRK11009         62 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTA  141 (237)
T ss_pred             CCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence            3559999999999998885  4455564  3456  44567667664  3467788899999999999999999999998


Q ss_pred             hchHHHHHHHHH-CCC--CCCCeEEeecC
Q 028215          181 FQRNTTEKNLLF-AGY--SDWKKLFLRYR  206 (212)
Q Consensus       181 ~~~~~T~~nL~~-~G~--~~~~~Lilr~~  206 (212)
                      ..++.|.++|.+ +|+  ..+..+++-++
T Consensus       142 ~k~~~t~~~Llk~~gip~~~~f~vil~gd  170 (237)
T PRK11009        142 TKTETVSKTLADDFHIPADNMNPVIFAGD  170 (237)
T ss_pred             cccHHHHHHHHHHcCCCcccceeEEEcCC
Confidence            888889999986 999  45556666544

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.51  E-value=1.2e-13  Score=118.68  Aligned_cols=95  Identities=20%  Similarity=0.190  Sum_probs=72.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCC---------HHHHHHHHHhcCC--CCChhHHHHHHHHHHCCCeEEEEcC
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFN---------EDAFDEWVDLAKA--PALPASLTFYKELKQLGFKIFLLTG  177 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~---------~~~~~~wv~~~~~--~~~pg~lell~~Lk~~G~kI~~vTg  177 (212)
                      ++.+|+|||||||+||.|++ .  +|...++         +..|+.|......  .+.+++.++|++++++|++++++||
T Consensus        62 ~p~aViFDlDgTLlDSs~~~-~--~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTn  138 (237)
T TIGR01672        62 PPIAVSFDIDDTVLFSSPGF-W--RGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTG  138 (237)
T ss_pred             CCeEEEEeCCCccccCcHHH-h--CCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeC
Confidence            34499999999999999986 2  3322233         4678999887654  5555599999999999999999999


Q ss_pred             CChhchHHHHHHHH-HCCCCCCCeEEeecC
Q 028215          178 RNEFQRNTTEKNLL-FAGYSDWKKLFLRYR  206 (212)
Q Consensus       178 R~~~~~~~T~~nL~-~~G~~~~~~Lilr~~  206 (212)
                      |.+...+.+.++|. .+|++.+...++..+
T Consensus       139 r~~~k~~~~a~~ll~~lGi~~~f~~i~~~d  168 (237)
T TIGR01672       139 RTPGKTDTVSKTLAKNFHIPAMNPVIFAGD  168 (237)
T ss_pred             CCCCcCHHHHHHHHHHhCCchheeEEECCC
Confidence            97654555666665 699998877776543

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=99.45  E-value=3.6e-13  Score=105.31  Aligned_cols=75  Identities=17%  Similarity=0.234  Sum_probs=63.4

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchH------
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRN------  184 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~------  184 (212)
                      ++|+|||||||+.+..         .+|.           ..++.+++.+.+++++++|++|+++|||+...+.      
T Consensus         2 K~i~~DiDGTL~~~~~---------~~y~-----------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i   61 (126)
T TIGR01689         2 KRLVMDLDNTITLTEN---------GDYA-----------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKI   61 (126)
T ss_pred             CEEEEeCCCCcccCCC---------Cccc-----------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhcccccc
Confidence            6899999999986410         0111           1368899999999999999999999999987766      


Q ss_pred             ------HHHHHHHHCCCCCCCeEEeecC
Q 028215          185 ------TTEKNLLFAGYSDWKKLFLRYR  206 (212)
Q Consensus       185 ------~T~~nL~~~G~~~~~~Lilr~~  206 (212)
                            .|.+||.++|++ |++|+||.+
T Consensus        62 ~~~~~~~t~~wL~k~~ip-Yd~l~~~kp   88 (126)
T TIGR01689        62 NIHTLPIIILWLNQHNVP-YDEIYVGKP   88 (126)
T ss_pred             chhhHHHHHHHHHHcCCC-CceEEeCCC
Confidence                  999999999999 899999985

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>smart00775 LNS2 LNS2 domain

Probab=99.02  E-value=1.2e-09  Score=88.23  Aligned_cols=80  Identities=23%  Similarity=0.275  Sum_probs=59.4

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHH
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL  191 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~  191 (212)
                      .|++||||||+++...  .+..   ++          .++....|++.+++++++++|++++++|||+..+...|.++|.
T Consensus         1 iVisDIDGTL~~sd~~--~~~~---~~----------~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~   65 (157)
T smart00775        1 IVISDIDGTITKSDVL--GHVV---PI----------IGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLS   65 (157)
T ss_pred             CEEEecCCCCcccccc--cccc---cc----------cccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHH
Confidence            4899999999986310  0000   00          1123567999999999999999999999999999888999998


Q ss_pred             H-----CCCCCCCeEEeecCC
Q 028215          192 F-----AGYSDWKKLFLRYRN  207 (212)
Q Consensus       192 ~-----~G~~~~~~Lilr~~~  207 (212)
                      .     ++++. ..+++++..
T Consensus        66 ~~~~~~~~lp~-g~li~~~g~   85 (157)
T smart00775       66 QIKQDGHNLPH-GPVLLSPDR   85 (157)
T ss_pred             HhhhccccCCC-ceEEEcCCc
Confidence            8     45763 467777653

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=98.96  E-value=4.7e-09  Score=87.35  Aligned_cols=92  Identities=18%  Similarity=0.292  Sum_probs=63.8

Q ss_pred             CCceEEEecCCCCCCChhhHhh------hcCCCCC--------------------CCHHHHHHHHH----------hcCC
Q 028215          109 GKDAWVFDIDETLLSNLPYYAA------HGFGSEI--------------------FNEDAFDEWVD----------LAKA  152 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~------~~~g~~~--------------------~~~~~~~~wv~----------~~~~  152 (212)
                      ..++|+||+||||+|+.+.+..      ..++...                    ++++.+.+...          ....
T Consensus         2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (214)
T PRK13288          2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKIDESKVEEMITTYREFNHEHHDELV   81 (214)
T ss_pred             CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhcCHHHHHHHHHHHHHHHHHhhhhhc
Confidence            3679999999999999886543      1222111                    11222222111          1245


Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      +++||+.++++.|+++|++++++||.++.   .+...|+..|+..|...++
T Consensus        82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~---~~~~~l~~~gl~~~f~~i~  129 (214)
T PRK13288         82 TEYETVYETLKTLKKQGYKLGIVTTKMRD---TVEMGLKLTGLDEFFDVVI  129 (214)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHcCChhceeEEE
Confidence            78999999999999999999999999865   3446788899998765554

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=98.94  E-value=3e-09  Score=90.12  Aligned_cols=90  Identities=21%  Similarity=0.330  Sum_probs=63.8

Q ss_pred             CceEEEecCCCCCCChhhHhhh------cCCCC---------------------------C--CCHHHHHHHHH------
Q 028215          110 KDAWVFDIDETLLSNLPYYAAH------GFGSE---------------------------I--FNEDAFDEWVD------  148 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~------~~g~~---------------------------~--~~~~~~~~wv~------  148 (212)
                      .+|+|||+||||+||.+.+.+.      .+|..                           .  .....-..+..      
T Consensus         2 ~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (221)
T COG0637           2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEALE   81 (221)
T ss_pred             CcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHhh
Confidence            5799999999999999977651      23311                           0  01111111111      


Q ss_pred             hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          149 LAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       149 ~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ....+++||+.++++.|+++|++++++|++++.   .+...|...|+..|...+
T Consensus        82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~---~~~~~L~~~gl~~~f~~~  132 (221)
T COG0637          82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRR---AAERVLARLGLLDYFDVI  132 (221)
T ss_pred             hcCCCCCccHHHHHHHHHhcCCcEEEecCChHH---HHHHHHHHccChhhcchh
Confidence            245799999999999999999999999999875   455788889988775443

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=98.93  E-value=7e-09  Score=87.74  Aligned_cols=93  Identities=18%  Similarity=0.219  Sum_probs=64.0

Q ss_pred             CCceEEEecCCCCCCChhhHhh------hcCCCCCCC------------------------H----HHHHHHHH------
Q 028215          109 GKDAWVFDIDETLLSNLPYYAA------HGFGSEIFN------------------------E----DAFDEWVD------  148 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~------~~~g~~~~~------------------------~----~~~~~wv~------  148 (212)
                      .+++||||+||||+|+.+.+..      ..+|..+.+                        .    +....+..      
T Consensus        11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (229)
T PRK13226         11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEALI   90 (229)
T ss_pred             cCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhh
Confidence            4689999999999999886654      123321111                        0    00111111      


Q ss_pred             hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEee
Q 028215          149 LAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR  204 (212)
Q Consensus       149 ~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lilr  204 (212)
                      ....+++||+.+++++|+++|++++++||.+..   .....|+++|+..+...+.-
T Consensus        91 ~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~---~~~~~l~~~~l~~~f~~i~~  143 (229)
T PRK13226         91 GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEY---LARLILPQLGWEQRCAVLIG  143 (229)
T ss_pred             hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHH---HHHHHHHHcCchhcccEEEe
Confidence            124688999999999999999999999999874   33467888898876555543

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=98.93  E-value=7.1e-09  Score=90.67  Aligned_cols=93  Identities=19%  Similarity=0.255  Sum_probs=64.7

Q ss_pred             CCCceEEEecCCCCCCChhhHhh------hcCCCCC----------------------CCHHHHHHHH-------H--hc
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAA------HGFGSEI----------------------FNEDAFDEWV-------D--LA  150 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~------~~~g~~~----------------------~~~~~~~~wv-------~--~~  150 (212)
                      +..++++||+||||+|+.+.+..      ..+|..+                      ++++.+.+..       .  ..
T Consensus        60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (273)
T PRK13225         60 QTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRRAGLSPWQQARLLQRVQRQLGDCLP  139 (273)
T ss_pred             hhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHHHHhhcc
Confidence            35789999999999999876553      1233211                      1111111111       1  13


Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..+++||+.++|+.|+++|++++++||..+.   .+...|+..|+..|...+.
T Consensus       140 ~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~---~~~~~L~~~gl~~~F~~vi  189 (273)
T PRK13225        140 ALQLFPGVADLLAQLRSRSLCLGILSSNSRQ---NIEAFLQRQGLRSLFSVVQ  189 (273)
T ss_pred             cCCcCCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHcCChhheEEEE
Confidence            4578999999999999999999999999875   4447889999987765543

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.91  E-value=2.9e-09  Score=79.94  Aligned_cols=58  Identities=22%  Similarity=0.394  Sum_probs=49.6

Q ss_pred             EEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHH
Q 028215          113 WVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF  192 (212)
Q Consensus       113 vvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~  192 (212)
                      ++||+||||+..                           ..++||+.+++++|+++|.+++|+||++...++...+.|++
T Consensus         1 ~l~D~dGvl~~g---------------------------~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~   53 (101)
T PF13344_consen    1 FLFDLDGVLYNG---------------------------NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK   53 (101)
T ss_dssp             EEEESTTTSEET---------------------------TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred             CEEeCccEeEeC---------------------------CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence            689999999963                           26899999999999999999999999998888888899999


Q ss_pred             CCCCC
Q 028215          193 AGYSD  197 (212)
Q Consensus       193 ~G~~~  197 (212)
                      .|++.
T Consensus        54 ~Gi~~   58 (101)
T PF13344_consen   54 LGIPV   58 (101)
T ss_dssp             TTTT-
T ss_pred             cCcCC
Confidence            99984

...

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=98.91  E-value=8.3e-09  Score=88.47  Aligned_cols=51  Identities=18%  Similarity=0.184  Sum_probs=42.6

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ...+++||+.++|+.|+++|++++++||.++..   +...|+++|+..|...++
T Consensus       105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~---~~~~l~~~gl~~~Fd~iv  155 (248)
T PLN02770        105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPREN---AELMISLLGLSDFFQAVI  155 (248)
T ss_pred             hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHHcCChhhCcEEE
Confidence            357889999999999999999999999998754   447888899988765443

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=98.89  E-value=4.7e-09  Score=84.95  Aligned_cols=78  Identities=28%  Similarity=0.293  Sum_probs=59.4

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHH
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL  191 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~  191 (212)
                      .||+|||||+..|.- .. +.+.             ..++....||+.+++++++++||++.++|+|+..+...|..||.
T Consensus         1 VVvsDIDGTiT~SD~-~G-~i~~-------------~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~   65 (157)
T PF08235_consen    1 VVVSDIDGTITKSDV-LG-HILP-------------ILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLA   65 (157)
T ss_pred             CEEEeccCCcCccch-hh-hhhh-------------ccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHH
Confidence            489999999997731 00 0000             01223578999999999999999999999999999999999999


Q ss_pred             HC-----CCCCCCeEEeec
Q 028215          192 FA-----GYSDWKKLFLRY  205 (212)
Q Consensus       192 ~~-----G~~~~~~Lilr~  205 (212)
                      ..     ++|. .-+++.+
T Consensus        66 ~~~q~~~~lP~-Gpv~~sP   83 (157)
T PF08235_consen   66 QHQQQGHNLPD-GPVLLSP   83 (157)
T ss_pred             HHHhCCccCCC-CCEEECC
Confidence            99     8884 3445543

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=98.87  E-value=1.4e-08  Score=85.51  Aligned_cols=93  Identities=19%  Similarity=0.285  Sum_probs=65.7

Q ss_pred             CCceEEEecCCCCCCChhhHhh------hcCCCCCCCH----------------------------HHHHHHHH------
Q 028215          109 GKDAWVFDIDETLLSNLPYYAA------HGFGSEIFNE----------------------------DAFDEWVD------  148 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~------~~~g~~~~~~----------------------------~~~~~wv~------  148 (212)
                      ..++|+||+||||+|+.+.+..      ..++..+.++                            +.+..|..      
T Consensus         3 ~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (220)
T COG0546           3 MIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTAY   82 (220)
T ss_pred             CCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHHH
Confidence            3679999999999999886554      1222211111                            12222211      


Q ss_pred             hcC--CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEee
Q 028215          149 LAK--APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLR  204 (212)
Q Consensus       149 ~~~--~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lilr  204 (212)
                      ...  ..++||+.++|..|+++|++++++||+++..   +...|+++|+..|...+.-
T Consensus        83 ~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~---~~~~l~~~gl~~~F~~i~g  137 (220)
T COG0546          83 AELLESRLFPGVKELLAALKSAGYKLGIVTNKPERE---LDILLKALGLADYFDVIVG  137 (220)
T ss_pred             HhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHH---HHHHHHHhCCccccceEEc
Confidence            112  4799999999999999999999999999864   4467888999998766654

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=98.86  E-value=1.3e-08  Score=83.96  Aligned_cols=50  Identities=14%  Similarity=0.244  Sum_probs=41.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..++.||+.++++.|+++|++++++||.+..   .....|++.|+..+...+.
T Consensus        83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~---~~~~~l~~~~l~~~f~~~~  132 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTP---LARPLLELLGLAKYFSVLI  132 (213)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHcCcHhhCcEEE
Confidence            3678999999999999999999999998764   3447888899987654443

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=98.85  E-value=7.2e-09  Score=87.72  Aligned_cols=50  Identities=24%  Similarity=0.300  Sum_probs=39.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ...++||+.++++.|+++|++++++||.+....   ...|+.+|+..|...+.
T Consensus        91 ~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~---~~~l~~~~l~~~fd~iv  140 (224)
T PRK14988         91 RAVLREDTVPFLEALKASGKRRILLTNAHPHNL---AVKLEHTGLDAHLDLLL  140 (224)
T ss_pred             cCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHH---HHHHHHCCcHHHCCEEE
Confidence            368899999999999999999999999876533   34577788877654333

>PRK11587 putative phosphatase; Provisional

Probab=98.85  E-value=2e-08  Score=84.15  Aligned_cols=91  Identities=21%  Similarity=0.293  Sum_probs=60.8

Q ss_pred             CCceEEEecCCCCCCChhhHhh------hcCCC-----------C-----------CCCH----HHHHHHH---H--hcC
Q 028215          109 GKDAWVFDIDETLLSNLPYYAA------HGFGS-----------E-----------IFNE----DAFDEWV---D--LAK  151 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~------~~~g~-----------~-----------~~~~----~~~~~wv---~--~~~  151 (212)
                      +.++||||+||||+|+.+.+..      ..+|.           .           ..+.    +.+.++.   .  ...
T Consensus         2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (218)
T PRK11587          2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAPDEVLNFIHGKQAITSLRHFMAGASEAEIQAEFTRLEQIEATDTEG   81 (218)
T ss_pred             CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCHHHHHHHHcCCCHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhhcC
Confidence            3579999999999999876542      11221           0           0111    1222211   1  235


Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      .+++||+.++|+.|+++|++++++||.+..   .+...+...|+..++.++
T Consensus        82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~---~~~~~l~~~~l~~~~~i~  129 (218)
T PRK11587         82 ITALPGAIALLNHLNKLGIPWAIVTSGSVP---VASARHKAAGLPAPEVFV  129 (218)
T ss_pred             ceeCcCHHHHHHHHHHcCCcEEEEcCCCch---HHHHHHHhcCCCCccEEE
Confidence            688999999999999999999999998764   234567778886444444

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.85  E-value=3.7e-08  Score=86.12  Aligned_cols=109  Identities=19%  Similarity=0.260  Sum_probs=76.6

Q ss_pred             CchhhHHHHhhccCccccccHHHHHHHHHHHH---hh----ccccCCCCCceEEEecCCCCCCChhhHhhhcCCCCCCCH
Q 028215           68 PSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHA---KS----ANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNE  140 (212)
Q Consensus        68 P~~C~~~v~~y~~~~~Y~~D~~~v~~~A~~y~---~~----~~~~~~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~  140 (212)
                      +++|...+...  ++... ..+.+..+...+.   ..    +.+. ..++++++||+|||+.++..        ..+|  
T Consensus       113 ~e~~~~R~~~R--~~~~~-~~~~i~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~D~dgtl~~~~~--------~~~~--  178 (300)
T PHA02530        113 VEELVKRNRKR--GERAV-PEDVLRSMFKQMKEYRGLVWPVYTAD-PGLPKAVIFDIDGTLAKMGG--------RSPY--  178 (300)
T ss_pred             HHHHHHHHHcc--CcCCC-CHHHHHHHHHHHHHhcCCCCceeccC-CCCCCEEEEECCCcCcCCCC--------CCcc--
Confidence            45677666664  22222 3344443333332   11    1222 34578999999999998743        1223  


Q ss_pred             HHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCC
Q 028215          141 DAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAG  194 (212)
Q Consensus       141 ~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G  194 (212)
                          +|......+++|++.++++.|+++|++++++|||++..+..+.++|...|
T Consensus       179 ----~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~  228 (300)
T PHA02530        179 ----DWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTD  228 (300)
T ss_pred             ----chhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcC
Confidence                35556677999999999999999999999999999999999999998887

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=98.81  E-value=2.3e-08  Score=86.90  Aligned_cols=50  Identities=20%  Similarity=0.206  Sum_probs=41.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..+++||+.++|+.|+++|++++++||++...   +...|+.+|+..|...++
T Consensus       107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~---~~~~l~~~gl~~~Fd~ii  156 (260)
T PLN03243        107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRY---LERAIEAVGMEGFFSVVL  156 (260)
T ss_pred             CcccCCCHHHHHHHHHHCCCEEEEEeCcCHHH---HHHHHHHcCCHhhCcEEE
Confidence            56789999999999999999999999998753   446788889987654444

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=98.79  E-value=3.3e-08  Score=81.74  Aligned_cols=48  Identities=17%  Similarity=0.181  Sum_probs=39.8

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ...++.||+.+++++|+++|++++++||++...   +...|+..|+..+..
T Consensus        72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~---~~~~l~~~~l~~~f~  119 (205)
T TIGR01454        72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPR---ARSLLEALGLLPLFD  119 (205)
T ss_pred             cccccCCCHHHHHHHHHHCCCeEEEEeCCchHH---HHHHHHHcCChhhee
Confidence            356889999999999999999999999987653   446788889976643

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=98.79  E-value=4.8e-08  Score=85.09  Aligned_cols=94  Identities=21%  Similarity=0.228  Sum_probs=63.5

Q ss_pred             CCCCceEEEecCCCCCCChhhHhh------hcCCCCC------------------------------CCHHHHH------
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAA------HGFGSEI------------------------------FNEDAFD------  144 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~------~~~g~~~------------------------------~~~~~~~------  144 (212)
                      +.-+++||||+||||+|+.+.+..      ..+|...                              .+++.+.      
T Consensus        10 ~~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   89 (272)
T PRK13223         10 GRLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALF   89 (272)
T ss_pred             CccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHH
Confidence            356889999999999999876553      1122110                              1111121      


Q ss_pred             -HHHHh--cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          145 -EWVDL--AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       145 -~wv~~--~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                       ++...  ...+++||+.++++.|+++|++++++||.++.   .....|.+.|+..|...+.
T Consensus        90 ~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~---~~~~~l~~~~i~~~f~~i~  148 (272)
T PRK13223         90 MEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPER---FVAPLLDQMKIGRYFRWII  148 (272)
T ss_pred             HHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHH---HHHHHHHHcCcHhhCeEEE
Confidence             11111  23578999999999999999999999998875   3346777888877655443

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=98.79  E-value=2.8e-08  Score=90.81  Aligned_cols=94  Identities=14%  Similarity=0.135  Sum_probs=65.0

Q ss_pred             CCCCceEEEecCCCCCCChh-hHhh------hcCCCC-----------------------C--CCHHHHHHHHH------
Q 028215          107 GDGKDAWVFDIDETLLSNLP-YYAA------HGFGSE-----------------------I--FNEDAFDEWVD------  148 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~-~~~~------~~~g~~-----------------------~--~~~~~~~~wv~------  148 (212)
                      +.+.++||||+||||+|+.+ .+..      ..+|..                       +  .++..+.++..      
T Consensus       128 ~~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y  207 (381)
T PLN02575        128 GCGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIY  207 (381)
T ss_pred             cCCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHH
Confidence            56889999999999999887 3321      112211                       0  01111221211      


Q ss_pred             ----hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          149 ----LAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       149 ----~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                          .....++||+.++|+.|+++|++++++||++..   .+...|+++|+..|...+.
T Consensus       208 ~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~---~~~~~L~~lgL~~yFd~Iv  263 (381)
T PLN02575        208 QALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRK---TLENAIGSIGIRGFFSVIV  263 (381)
T ss_pred             HHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHcCCHHHceEEE
Confidence                134678999999999999999999999999875   4446788899988765554

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=98.77  E-value=4.9e-08  Score=78.75  Aligned_cols=48  Identities=25%  Similarity=0.358  Sum_probs=38.8

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..++.||+.++++.|+++|++++++||+ .    .....|+..|+..|...+.
T Consensus        86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~-~----~~~~~l~~~~l~~~f~~v~  133 (185)
T TIGR02009        86 GAEVLPGIENFLKRLKKKGIAVGLGSSS-K----NADRILAKLGLTDYFDAIV  133 (185)
T ss_pred             CCCCCcCHHHHHHHHHHcCCeEEEEeCc-h----hHHHHHHHcChHHHCCEee
Confidence            4689999999999999999999999998 2    2346788889877654443

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=98.77  E-value=3.1e-08  Score=82.53  Aligned_cols=47  Identities=26%  Similarity=0.332  Sum_probs=38.8

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC--CCCe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS--DWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~--~~~~  200 (212)
                      ..++.||+.++++.|+++|++++++||++.....   ..|+++|+.  .|..
T Consensus        85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~---~~l~~~~l~~~~~f~  133 (220)
T TIGR03351        85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAE---RLLEKLGWTVGDDVD  133 (220)
T ss_pred             CCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHH---HHHHHhhhhhhccCC
Confidence            3589999999999999999999999999876544   577778886  5543

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=98.77  E-value=7.1e-08  Score=80.21  Aligned_cols=50  Identities=16%  Similarity=0.194  Sum_probs=41.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ...+.||+.++++.|+++|++++++||..+...   ...++++|+..+...++
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~---~~~l~~~~l~~~f~~~~  140 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFV---APLLEALGIADYFSVVI  140 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHHcCCccCccEEE
Confidence            467999999999999999999999999987533   36788889987655554

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=98.73  E-value=6.9e-08  Score=82.50  Aligned_cols=45  Identities=18%  Similarity=0.142  Sum_probs=38.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..+++||+.++|++|+++|++++++||++.....   ..|+++|+..|
T Consensus        97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~---~~l~~~gl~~~  141 (253)
T TIGR01422        97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMD---VVAPEAALQGY  141 (253)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHH---HHHHHHHhcCC
Confidence            4689999999999999999999999999876443   56777787766

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01684 viral_ppase viral phosphatase

Probab=98.73  E-value=4.3e-08  Score=86.59  Aligned_cols=69  Identities=17%  Similarity=0.217  Sum_probs=55.5

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCC-hhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPAL-PASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~-pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      -++.|+||+||||++...                        +..+. ||+.++|++|+++|++++++||+++...   .
T Consensus       125 ~~kvIvFDLDgTLi~~~~------------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v---~  177 (301)
T TIGR01684       125 PPHVVVFDLDSTLITDEE------------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHV---V  177 (301)
T ss_pred             cceEEEEecCCCCcCCCC------------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHH---H
Confidence            477999999999997621                        12234 9999999999999999999999987644   3


Q ss_pred             HHHHHCCCCCCCeEEee
Q 028215          188 KNLLFAGYSDWKKLFLR  204 (212)
Q Consensus       188 ~nL~~~G~~~~~~Lilr  204 (212)
                      +.|++.|+..|...+.-
T Consensus       178 ~~L~~lGLd~YFdvIIs  194 (301)
T TIGR01684       178 ESMRKVKLDRYFDIIIS  194 (301)
T ss_pred             HHHHHcCCCcccCEEEE
Confidence            78999999988655554

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=98.73  E-value=5.5e-08  Score=80.10  Aligned_cols=48  Identities=19%  Similarity=0.151  Sum_probs=38.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      .+.+++.++|+.|+++|++++++||+++.   .+...|+..|+..|...+.
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~---~~~~~l~~~gl~~~f~~~~  153 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGRPRK---DAAKFLTTHGLEILFPVQI  153 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCCCHH---HHHHHHHHcCchhhCCEEE
Confidence            44556699999999999999999999875   3447888999987654443

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PLN02645 phosphoglycolate phosphatase

Probab=98.73  E-value=2.6e-08  Score=88.42  Aligned_cols=64  Identities=17%  Similarity=0.262  Sum_probs=55.9

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      +..++++|||||||++.                           ..++||+.+++++|+++|++++|+|||+...+....
T Consensus        26 ~~~~~~~~D~DGtl~~~---------------------------~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~   78 (311)
T PLN02645         26 DSVETFIFDCDGVIWKG---------------------------DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYG   78 (311)
T ss_pred             HhCCEEEEeCcCCeEeC---------------------------CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHH
Confidence            35789999999999974                           147899999999999999999999999988777778


Q ss_pred             HHHHHCCCCCC
Q 028215          188 KNLLFAGYSDW  198 (212)
Q Consensus       188 ~nL~~~G~~~~  198 (212)
                      +.|++.|++..
T Consensus        79 ~~l~~lGi~~~   89 (311)
T PLN02645         79 KKFESLGLNVT   89 (311)
T ss_pred             HHHHHCCCCCC
Confidence            88999999754

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=98.71  E-value=5.8e-08  Score=80.71  Aligned_cols=47  Identities=17%  Similarity=0.212  Sum_probs=39.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ..++.||+.++|++|+++|++++++||.+...   ....|++.|+..|..
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~---~~~~l~~~~l~~~f~  138 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVK---QWEKLERLGVRDFFD  138 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHhCChHHhcc
Confidence            35889999999999999999999999997643   345788899987643

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=98.71  E-value=1.2e-07  Score=79.34  Aligned_cols=50  Identities=22%  Similarity=0.182  Sum_probs=41.7

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..+++||+.++++.|+++|++++++||....   .+...++..|+..|...+.
T Consensus        90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~~~l~~~f~~~~  139 (222)
T PRK10826         90 TRPLLPGVREALALCKAQGLKIGLASASPLH---MLEAVLTMFDLRDYFDALA  139 (222)
T ss_pred             CCCCCCCHHHHHHHHHHCCCeEEEEeCCcHH---HHHHHHHhCcchhcccEEE
Confidence            4689999999999999999999999998765   3446788899988765554

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=98.70  E-value=1.2e-07  Score=76.46  Aligned_cols=47  Identities=23%  Similarity=0.272  Sum_probs=37.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      .+++||+.++|+.|+++|++++++|++...     ...|++.|+..+...++
T Consensus        86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~~-----~~~l~~~~l~~~f~~~~  132 (185)
T TIGR01990        86 ADVLPGIKNLLDDLKKNNIKIALASASKNA-----PTVLEKLGLIDYFDAIV  132 (185)
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCccH-----HHHHHhcCcHhhCcEEE
Confidence            478999999999999999999999987532     24688889887654443

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=98.68  E-value=1.4e-07  Score=77.52  Aligned_cols=47  Identities=19%  Similarity=0.278  Sum_probs=38.9

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ..++.||+.+++++|+++|++++++||.+...   ....|++.|+..+..
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~---~~~~l~~~gl~~~fd  136 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAM---LKSLVKHAGLDDPFD  136 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHCCChhhhh
Confidence            46789999999999999999999999988753   336778889876543

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.68  E-value=3.3e-08  Score=76.27  Aligned_cols=68  Identities=24%  Similarity=0.375  Sum_probs=50.7

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc-----hHH
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ-----RNT  185 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~-----~~~  185 (212)
                      ++++||+||||.++.++..            .|      ....+.|++.+++++|+++|++++++||++...     .+.
T Consensus         1 k~~~~D~dgtL~~~~~~~~------------~~------~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~   62 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVPYVD------------DE------DERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGR   62 (132)
T ss_pred             CEEEEeCCCceecCCCCCC------------CH------HHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHH
Confidence            5899999999997522110            11      113789999999999999999999999998322     234


Q ss_pred             HHHHHHHCCCC
Q 028215          186 TEKNLLFAGYS  196 (212)
Q Consensus       186 T~~nL~~~G~~  196 (212)
                      ..+.++..|+.
T Consensus        63 ~~~~l~~~~l~   73 (132)
T TIGR01662        63 VARRLEELGVP   73 (132)
T ss_pred             HHHHHHHCCCC
Confidence            55678888887

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=98.67  E-value=3.7e-08  Score=81.26  Aligned_cols=91  Identities=19%  Similarity=0.340  Sum_probs=59.8

Q ss_pred             EEEecCCCCCCChhhHhh---hcCCCCC-CCH------HHHHHH--------------HHh----cCCCCChhHHHHHHH
Q 028215          113 WVFDIDETLLSNLPYYAA---HGFGSEI-FNE------DAFDEW--------------VDL----AKAPALPASLTFYKE  164 (212)
Q Consensus       113 vvfDIDgTLldn~~~~~~---~~~g~~~-~~~------~~~~~w--------------v~~----~~~~~~pg~lell~~  164 (212)
                      |.+||||||.|..+.+..   ..|+..+ .+.      ..+..|              ...    ...+|+||+.|.+++
T Consensus         5 I~iDiDgVLad~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~f~~l~p~~gA~e~l~~   84 (191)
T PF06941_consen    5 IAIDIDGVLADFNSAFIEWFNEEFGKNPELTPEDITGYWDWEKWGITEPEFYEKLWRFYEEPGFFSNLPPIPGAVEALKK   84 (191)
T ss_dssp             EEEESBTTTB-HHHHHHHHHHHHTTTS----GGGGTSSSHHHHHHHHSTTHHHHHHHHHTSTTTTTT--B-TTHHHHHHH
T ss_pred             EEEECCCCCcccHHHHHHHHHHHcCCCCCCCHHHhhhhhHHHHhCCCCHHHHHHHHHHHhChhhhcCCCccHHHHHHHHH
Confidence            899999999998765443   2344320 110      112222              111    357999999999999


Q ss_pred             HHHCCCeEEEEcCCChh----chHHHHHHHHHC--CCCCCCeEEee
Q 028215          165 LKQLGFKIFLLTGRNEF----QRNTTEKNLLFA--GYSDWKKLFLR  204 (212)
Q Consensus       165 Lk~~G~kI~~vTgR~~~----~~~~T~~nL~~~--G~~~~~~Lilr  204 (212)
                      |.+.|+.++++|+|+..    ..+.|.+||+++  +++ ++++++-
T Consensus        85 L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~-~~~~~~~  129 (191)
T PF06941_consen   85 LRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIP-YDNLIFT  129 (191)
T ss_dssp             HHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHH-HCCEEEE
T ss_pred             HHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCc-hheEEEe
Confidence            99999999999999876    467899999998  444 6677764

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=98.67  E-value=6.7e-08  Score=89.97  Aligned_cols=50  Identities=10%  Similarity=0.184  Sum_probs=41.7

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..+++||+.++|++|+++|++++++||++...   +...|+.+|+..|...++
T Consensus       328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~---~~~~l~~~~l~~~f~~i~  377 (459)
T PRK06698        328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEY---LRAIVSYYDLDQWVTETF  377 (459)
T ss_pred             CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHH---HHHHHHHCCcHhhcceeE
Confidence            46889999999999999999999999998754   446788899987754444

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.66  E-value=5.7e-08  Score=72.73  Aligned_cols=66  Identities=32%  Similarity=0.389  Sum_probs=52.4

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHH
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL  191 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~  191 (212)
                      +++||+||||....++...                  .....+.|++.+++++|+++|++++++||+...   ....+++
T Consensus         1 ~~vfD~D~tl~~~~~~~~~------------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~---~~~~~~~   59 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAE------------------IEELELYPGVKEALKELKEKGIKLALATNKSRR---EVLELLE   59 (139)
T ss_pred             CeEEccCCceEccCccccc------------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHH
Confidence            4799999999987553322                  234588999999999999999999999999854   4557888


Q ss_pred             HCCCCCC
Q 028215          192 FAGYSDW  198 (212)
Q Consensus       192 ~~G~~~~  198 (212)
                      ..|+..+
T Consensus        60 ~~~~~~~   66 (139)
T cd01427          60 ELGLDDY   66 (139)
T ss_pred             HcCCchh
Confidence            8887543

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=98.64  E-value=6.3e-08  Score=83.76  Aligned_cols=63  Identities=19%  Similarity=0.240  Sum_probs=53.2

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHH
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL  190 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL  190 (212)
                      ++++||+||||++...                       ..-.++|++.++++.|+++|++++|+|||+...++...+.|
T Consensus         2 k~i~~D~DGtl~~~~~-----------------------~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l   58 (257)
T TIGR01458         2 KGVLLDISGVLYISDA-----------------------KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL   58 (257)
T ss_pred             CEEEEeCCCeEEeCCC-----------------------cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence            5899999999996410                       00128999999999999999999999999988777788899


Q ss_pred             HHCCCC
Q 028215          191 LFAGYS  196 (212)
Q Consensus       191 ~~~G~~  196 (212)
                      ++.|++
T Consensus        59 ~~~g~~   64 (257)
T TIGR01458        59 QRLGFD   64 (257)
T ss_pred             HHcCCC
Confidence            999987

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PRK10444 UMP phosphatase; Provisional

Probab=98.64  E-value=7e-08  Score=83.32  Aligned_cols=60  Identities=22%  Similarity=0.334  Sum_probs=54.1

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.++||+||||++.                           ..++|++.++++.|+++|.+++++|||+...+....+.
T Consensus         1 ~~~v~~DlDGtL~~~---------------------------~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~   53 (248)
T PRK10444          1 IKNVICDIDGVLMHD---------------------------NVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANR   53 (248)
T ss_pred             CcEEEEeCCCceEeC---------------------------CeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence            368999999999975                           15799999999999999999999999998888888899


Q ss_pred             HHHCCCC
Q 028215          190 LLFAGYS  196 (212)
Q Consensus       190 L~~~G~~  196 (212)
                      |.+.|++
T Consensus        54 l~~~G~~   60 (248)
T PRK10444         54 FATAGVD   60 (248)
T ss_pred             HHHcCCC
Confidence            9999996

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=98.63  E-value=7.8e-08  Score=83.87  Aligned_cols=61  Identities=16%  Similarity=0.315  Sum_probs=53.4

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .++|+|||||||++.                           ..++||+.+++++|+++|++++++|||+...+......
T Consensus         2 ~~~~~~D~DGtl~~~---------------------------~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~   54 (279)
T TIGR01452         2 AQGFIFDCDGVLWLG---------------------------ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALK   54 (279)
T ss_pred             ccEEEEeCCCceEcC---------------------------CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence            578999999999864                           15789999999999999999999999987777777788


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      |+++|+..
T Consensus        55 l~~~G~~~   62 (279)
T TIGR01452        55 FARLGFNG   62 (279)
T ss_pred             HHHcCCCC
Confidence            99999874

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=98.61  E-value=8.1e-08  Score=76.06  Aligned_cols=70  Identities=16%  Similarity=0.309  Sum_probs=52.1

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc--------
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ--------  182 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~--------  182 (212)
                      ++++||+||||.++...+         | ...|.+|      .+.||+.+++++|+++|++++++||.++..        
T Consensus         1 ~~~~~d~dgtl~~~~~~~---------~-~~~~~~~------~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~   64 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSD---------Y-PRSLDDW------QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEA   64 (147)
T ss_pred             CeEEEeCCCceeccCCcc---------c-CCCHHHe------EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHH
Confidence            479999999999875311         1 1124333      689999999999999999999999987411        


Q ss_pred             ----hHHHHHHHHHCCCC
Q 028215          183 ----RNTTEKNLLFAGYS  196 (212)
Q Consensus       183 ----~~~T~~nL~~~G~~  196 (212)
                          ...+...|++.|+.
T Consensus        65 ~~~~~~~~~~~l~~~~l~   82 (147)
T TIGR01656        65 FRAPNGRVLELLRQLGVA   82 (147)
T ss_pred             HHHHHHHHHHHHHhCCCc
Confidence                13455678888887

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.60  E-value=1.7e-07  Score=77.99  Aligned_cols=85  Identities=22%  Similarity=0.250  Sum_probs=57.4

Q ss_pred             CCceEEEecCCCCCCChhhHhhh-cCCCC-------------CCCH----------------HHHHHHHHhcCCCCChhH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAH-GFGSE-------------IFNE----------------DAFDEWVDLAKAPALPAS  158 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~-~~g~~-------------~~~~----------------~~~~~wv~~~~~~~~pg~  158 (212)
                      .+++++||+||||+++..+..-. .+|..             ..+.                +.+.++.  ...++.||+
T Consensus        13 ~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~   90 (219)
T TIGR00338        13 SKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGLPVELLKEVR--ENLPLTEGA   90 (219)
T ss_pred             cCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCHHHHHHHH--hcCCcCCCH
Confidence            47799999999999986643311 12210             0110                1111111  346789999


Q ss_pred             HHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          159 LTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       159 lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      .++++.|+++|++++++||.....   ....+++.|+..+
T Consensus        91 ~~~l~~l~~~g~~~~IvS~~~~~~---~~~~l~~~~i~~~  127 (219)
T TIGR00338        91 EELVKTLKEKGYKVAVISGGFDLF---AEHVKDKLGLDAA  127 (219)
T ss_pred             HHHHHHHHHCCCEEEEECCCcHHH---HHHHHHHcCCCce
Confidence            999999999999999999987643   3356777888764

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PLN02954 phosphoserine phosphatase

Probab=98.59  E-value=3.4e-07  Score=76.45  Aligned_cols=86  Identities=19%  Similarity=0.244  Sum_probs=59.0

Q ss_pred             CCCceEEEecCCCCCCChhhHhh-hcCCC---------------CCCC-------------HHHHHHHHHhcCCCCChhH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAA-HGFGS---------------EIFN-------------EDAFDEWVDLAKAPALPAS  158 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~-~~~g~---------------~~~~-------------~~~~~~wv~~~~~~~~pg~  158 (212)
                      ..+++|+||+||||+++.....- ..+|.               .++.             .+.+.++.......+.||+
T Consensus        10 ~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pg~   89 (224)
T PLN02954         10 RSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEKRPPRLSPGI   89 (224)
T ss_pred             ccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHccCCCCccH
Confidence            35889999999999997553221 11221               0110             1223333333345689999


Q ss_pred             HHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          159 LTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       159 lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      .++++.|+++|++++++||..+..   +...|+.+|++
T Consensus        90 ~e~l~~l~~~g~~~~IvS~~~~~~---i~~~l~~~gi~  124 (224)
T PLN02954         90 PELVKKLRARGTDVYLVSGGFRQM---IAPVAAILGIP  124 (224)
T ss_pred             HHHHHHHHHCCCEEEEECCCcHHH---HHHHHHHhCCC
Confidence            999999999999999999998754   44677788886

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=98.57  E-value=1.5e-07  Score=78.86  Aligned_cols=60  Identities=20%  Similarity=0.166  Sum_probs=47.6

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.+++||||||++..                          ....|.+.+.+++|+++|++++++|||+.....   ..
T Consensus         3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~---~~   53 (230)
T PRK01158          3 IKAIAIDIDGTITDKD--------------------------RRLSLKAVEAIRKAEKLGIPVILATGNVLCFAR---AA   53 (230)
T ss_pred             eeEEEEecCCCcCCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEEcCCchHHHH---HH
Confidence            4789999999999752                          135678899999999999999999999976433   45


Q ss_pred             HHHCCCCCC
Q 028215          190 LLFAGYSDW  198 (212)
Q Consensus       190 L~~~G~~~~  198 (212)
                      ++..|++.+
T Consensus        54 ~~~l~~~~~   62 (230)
T PRK01158         54 AKLIGTSGP   62 (230)
T ss_pred             HHHhCCCCc
Confidence            566777654

>PLN02940 riboflavin kinase

Probab=98.57  E-value=3e-07  Score=84.00  Aligned_cols=93  Identities=18%  Similarity=0.267  Sum_probs=62.1

Q ss_pred             CCCceEEEecCCCCCCChhhHhh------hcCCCC---------------------------CCCHHH----HHHHHH--
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAA------HGFGSE---------------------------IFNEDA----FDEWVD--  148 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~------~~~g~~---------------------------~~~~~~----~~~wv~--  148 (212)
                      +..++|+||+||||+|+.+.+..      ..+|..                           +.+.+.    +.+...  
T Consensus         9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (382)
T PLN02940          9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSEQ   88 (382)
T ss_pred             ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            45889999999999999886553      122210                           000111    111111  


Q ss_pred             hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHH-HCCCCCCCeEEe
Q 028215          149 LAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL-FAGYSDWKKLFL  203 (212)
Q Consensus       149 ~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~-~~G~~~~~~Lil  203 (212)
                      .....++||+.+++++|+++|++++++||.++..   +...|. ..|+..|...++
T Consensus        89 ~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~---~~~~l~~~~gl~~~Fd~ii  141 (382)
T PLN02940         89 WCNIKALPGANRLIKHLKSHGVPMALASNSPRAN---IEAKISCHQGWKESFSVIV  141 (382)
T ss_pred             HccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHH---HHHHHHhccChHhhCCEEE
Confidence            1346789999999999999999999999998653   335665 578877655544

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=98.57  E-value=4.8e-07  Score=79.46  Aligned_cols=33  Identities=24%  Similarity=0.304  Sum_probs=29.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchH
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRN  184 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~  184 (212)
                      .+++||+.++|++|+++|++++++||.+.....
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~  175 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVS  175 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHH
Confidence            489999999999999999999999998775444

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.54  E-value=3.2e-07  Score=81.20  Aligned_cols=69  Identities=20%  Similarity=0.203  Sum_probs=54.7

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCC-ChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPA-LPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~-~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      -++.++|||||||+....                        +..+ -|++.++|++|+++|++++++|+.++...   .
T Consensus       127 ~~~~i~~D~D~TL~~~~~------------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v---~  179 (303)
T PHA03398        127 IPHVIVFDLDSTLITDEE------------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHV---V  179 (303)
T ss_pred             eccEEEEecCCCccCCCC------------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHH---H
Confidence            478999999999997521                        1223 49999999999999999999998876533   5


Q ss_pred             HHHHHCCCCCCCeEEee
Q 028215          188 KNLLFAGYSDWKKLFLR  204 (212)
Q Consensus       188 ~nL~~~G~~~~~~Lilr  204 (212)
                      ..|.++|+..+...+.-
T Consensus       180 ~~Le~lgL~~yFDvII~  196 (303)
T PHA03398        180 HSLKETKLEGYFDIIIC  196 (303)
T ss_pred             HHHHHcCCCccccEEEE
Confidence            78999999988655543

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=98.54  E-value=2e-07  Score=79.84  Aligned_cols=59  Identities=24%  Similarity=0.372  Sum_probs=47.6

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.+++||||||+++.                          ....|.+.+.+++++++|++++++|||+...   +...
T Consensus         3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~---~~~~   53 (272)
T PRK10530          3 YRVIALDLDGTLLTPK--------------------------KTILPESLEALARAREAGYKVIIVTGRHHVA---IHPF   53 (272)
T ss_pred             ccEEEEeCCCceECCC--------------------------CccCHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHH
Confidence            5799999999999751                          1456788999999999999999999999753   3356


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      +++.|+..
T Consensus        54 ~~~l~~~~   61 (272)
T PRK10530         54 YQALALDT   61 (272)
T ss_pred             HHhcCCCC
Confidence            67777764

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.53  E-value=3.5e-07  Score=78.05  Aligned_cols=67  Identities=10%  Similarity=0.241  Sum_probs=53.7

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      +..++++||+|||+++.                           ..++||+.+++++|+++|++++++||.++. .....
T Consensus         6 ~~~~~~~~D~dG~l~~~---------------------------~~~~pga~e~L~~L~~~G~~~~ivTN~~~~-~~~~~   57 (242)
T TIGR01459         6 NDYDVFLLDLWGVIIDG---------------------------NHTYPGAVQNLNKIIAQGKPVYFVSNSPRN-IFSLH   57 (242)
T ss_pred             hcCCEEEEecccccccC---------------------------CccCccHHHHHHHHHHCCCEEEEEeCCCCC-hHHHH
Confidence            45789999999999964                           267999999999999999999999998764 22234


Q ss_pred             HHHHHCCCCC-CCeEE
Q 028215          188 KNLLFAGYSD-WKKLF  202 (212)
Q Consensus       188 ~nL~~~G~~~-~~~Li  202 (212)
                      +.|++.|++. +...+
T Consensus        58 ~~L~~~gl~~~~~~~I   73 (242)
T TIGR01459        58 KTLKSLGINADLPEMI   73 (242)
T ss_pred             HHHHHCCCCccccceE
Confidence            6789999986 54333

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK10976 putative hydrolase; Provisional

Probab=98.53  E-value=2.3e-07  Score=79.66  Aligned_cols=60  Identities=22%  Similarity=0.158  Sum_probs=47.8

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.+++||||||+++.                          ...-|.+.+.+++++++|++++++|||+....   ...
T Consensus         2 ikli~~DlDGTLl~~~--------------------------~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~   52 (266)
T PRK10976          2 YQVVASDLDGTLLSPD--------------------------HTLSPYAKETLKLLTARGIHFVFATGRHHVDV---GQI   52 (266)
T ss_pred             ceEEEEeCCCCCcCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHH---HHH
Confidence            4789999999999751                          14567889999999999999999999997633   345


Q ss_pred             HHHCCCCCC
Q 028215          190 LLFAGYSDW  198 (212)
Q Consensus       190 L~~~G~~~~  198 (212)
                      ++..|+..+
T Consensus        53 ~~~l~~~~~   61 (266)
T PRK10976         53 RDNLEIKSY   61 (266)
T ss_pred             HHhcCCCCe
Confidence            667777653

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=98.53  E-value=6.8e-07  Score=72.43  Aligned_cols=91  Identities=20%  Similarity=0.251  Sum_probs=59.0

Q ss_pred             CCCceEEEecCCCCCCChhhHhh------hcCCCC---------------------------CCCHHHHHH----HHH--
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAA------HGFGSE---------------------------IFNEDAFDE----WVD--  148 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~------~~~g~~---------------------------~~~~~~~~~----wv~--  148 (212)
                      ++.++|+||+||||+|+.+.+..      ..+|..                           ..+.+.+..    ...  
T Consensus         3 ~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (188)
T PRK10725          3 DRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVKSM   82 (188)
T ss_pred             CcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            45789999999999999876543      122211                           001111111    111  


Q ss_pred             -hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          149 -LAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       149 -~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                       ....+++|+ .+++..|+++ ++++++||.++....   ..|+++|+..|...+.
T Consensus        83 ~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~---~~l~~~~l~~~fd~i~  133 (188)
T PRK10725         83 LLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAE---ALLAHLGLRRYFDAVV  133 (188)
T ss_pred             HhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHH---HHHHhCCcHhHceEEE
Confidence             134467786 6999999876 899999998875433   6889999988755444

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=98.52  E-value=3e-07  Score=75.00  Aligned_cols=45  Identities=13%  Similarity=-0.014  Sum_probs=37.7

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..++.||+.++++.|+++|++++++||+.....   ...++.+|+..+
T Consensus        78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~---~~~l~~~g~~~~  122 (201)
T TIGR01491        78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLA---KKVAEKLNPDYV  122 (201)
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHHHhCCCeE
Confidence            568899999999999999999999999987544   466777787654

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=98.52  E-value=2.7e-07  Score=79.65  Aligned_cols=60  Identities=20%  Similarity=0.216  Sum_probs=48.6

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.+++||||||+++.                          ....+.+.+.+++|+++|++++++|||+...   ....
T Consensus         2 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~---~~~~   52 (272)
T PRK15126          2 ARLAAFDMDGTLLMPD--------------------------HHLGEKTLSTLARLRERDITLTFATGRHVLE---MQHI   52 (272)
T ss_pred             ccEEEEeCCCcCcCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHH
Confidence            5789999999999751                          1466788999999999999999999999753   3356


Q ss_pred             HHHCCCCCC
Q 028215          190 LLFAGYSDW  198 (212)
Q Consensus       190 L~~~G~~~~  198 (212)
                      +++.|+..+
T Consensus        53 ~~~l~~~~~   61 (272)
T PRK15126         53 LGALSLDAY   61 (272)
T ss_pred             HHHcCCCCc
Confidence            777787754

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=98.51  E-value=9.1e-07  Score=76.41  Aligned_cols=45  Identities=22%  Similarity=0.228  Sum_probs=36.2

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ...++||+.++|+.|+++|++++++||.++....   ..|+.+|+.++
T Consensus        99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~---~~l~~~~l~~~  143 (267)
T PRK13478         99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMD---VVVPLAAAQGY  143 (267)
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHH---HHHHHHhhcCC
Confidence            4688999999999999999999999999886433   55666665544

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=98.51  E-value=3.6e-07  Score=71.85  Aligned_cols=73  Identities=23%  Similarity=0.318  Sum_probs=48.4

Q ss_pred             eEEEecCCCCCCChhhHhh------hcCCC----------CCCC-----HHHHHHHHH-hcCCCCChhHHHHHHHHHHCC
Q 028215          112 AWVFDIDETLLSNLPYYAA------HGFGS----------EIFN-----EDAFDEWVD-LAKAPALPASLTFYKELKQLG  169 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~------~~~g~----------~~~~-----~~~~~~wv~-~~~~~~~pg~lell~~Lk~~G  169 (212)
                      +++||+||||+|+.+.+..      ..++.          .+..     ...|.+... .......||+.++++.|+++|
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~L~~~g   80 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEETLEEFGEDFQALKALRGLAEELLYRIATSFEELLGYDAEEAYIRGAADLLKRLKEAG   80 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHHHHHhcccHHHHHHHHccChHHHHHHHHHHHHHhCcchhheeccCHHHHHHHHHHCc
Confidence            5899999999999765332      11221          0100     012222221 134567899999999999999


Q ss_pred             CeEEEEcCCChhchH
Q 028215          170 FKIFLLTGRNEFQRN  184 (212)
Q Consensus       170 ~kI~~vTgR~~~~~~  184 (212)
                      ++++++||++.....
T Consensus        81 ~~~~i~T~~~~~~~~   95 (154)
T TIGR01549        81 IKLGIISNGSLRAQK   95 (154)
T ss_pred             CeEEEEeCCchHHHH
Confidence            999999999876544

HAD subfamilies caused by an overly broad single model.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=98.50  E-value=5.8e-07  Score=73.10  Aligned_cols=75  Identities=21%  Similarity=0.197  Sum_probs=53.6

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhch-----
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQR-----  183 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~-----  183 (212)
                      ..+.++||+||||+.+...   ..   .+.+++.|        ..+.||+.++|+.|+++|++++++||.+...+     
T Consensus        12 ~~k~~~~D~Dgtl~~~~~~---~~---~~~~~~~~--------~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~   77 (166)
T TIGR01664        12 QSKVAAFDLDGTLITTRSG---KV---FPTSASDW--------RFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSA   77 (166)
T ss_pred             cCcEEEEeCCCceEecCCC---Cc---ccCChHHe--------EEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccH
Confidence            3578999999999975320   00   01234444        13689999999999999999999999876311     


Q ss_pred             ----HHHHHHHHHCCCCC
Q 028215          184 ----NTTEKNLLFAGYSD  197 (212)
Q Consensus       184 ----~~T~~nL~~~G~~~  197 (212)
                          ..+...|+.+|++.
T Consensus        78 ~~~~~~i~~~l~~~gl~~   95 (166)
T TIGR01664        78 ESFKNKIEAFLEKLKVPI   95 (166)
T ss_pred             HHHHHHHHHHHHHcCCCE
Confidence                23456789999863

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=98.50  E-value=4.1e-07  Score=74.84  Aligned_cols=47  Identities=13%  Similarity=0.226  Sum_probs=37.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..++||+.+++++|+++|++++++||.+..    ....|++.|+..+...+
T Consensus       104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~----~~~~l~~~~l~~~fd~i  150 (203)
T TIGR02252       104 WQVYPDAIKLLKDLRERGLILGVISNFDSR----LRGLLEALGLLEYFDFV  150 (203)
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEeCCchh----HHHHHHHCCcHHhcceE
Confidence            367999999999999999999999997653    24578888987654333

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=98.49  E-value=3.4e-07  Score=78.77  Aligned_cols=60  Identities=17%  Similarity=0.300  Sum_probs=50.3

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHH
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL  190 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL  190 (212)
                      +.++|||||||++.                           ..++|++.+++++|+++|++++|+||++....+...+.|
T Consensus         2 ~~~~~D~DGtl~~~---------------------------~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l   54 (249)
T TIGR01457         2 KGYLIDLDGTMYKG---------------------------KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML   54 (249)
T ss_pred             CEEEEeCCCceEcC---------------------------CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            58999999999974                           146789999999999999999999986654555667889


Q ss_pred             HHCCCCC
Q 028215          191 LFAGYSD  197 (212)
Q Consensus       191 ~~~G~~~  197 (212)
                      ++.|++.
T Consensus        55 ~~~g~~~   61 (249)
T TIGR01457        55 ASFDIPA   61 (249)
T ss_pred             HHcCCCC
Confidence            9999875

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=98.48  E-value=4e-07  Score=75.96  Aligned_cols=58  Identities=19%  Similarity=0.167  Sum_probs=46.0

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHH
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL  190 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL  190 (212)
                      +.|++||||||+++.                          ....|.+.+.+++|+++|++++++|||+.....   ..+
T Consensus         2 k~v~~DlDGTLl~~~--------------------------~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~---~~~   52 (215)
T TIGR01487         2 KLVAIDIDGTLTEPN--------------------------RMISERAIEAIRKAEKKGIPVSLVTGNTVPFAR---ALA   52 (215)
T ss_pred             cEEEEecCCCcCCCC--------------------------cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHH---HHH
Confidence            689999999999751                          146678899999999999999999999976433   345


Q ss_pred             HHCCCCC
Q 028215          191 LFAGYSD  197 (212)
Q Consensus       191 ~~~G~~~  197 (212)
                      +..++..
T Consensus        53 ~~l~~~~   59 (215)
T TIGR01487        53 VLIGTSG   59 (215)
T ss_pred             HHhCCCC
Confidence            5666663

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=98.48  E-value=2.9e-07  Score=75.79  Aligned_cols=45  Identities=18%  Similarity=0.270  Sum_probs=38.0

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ...++.||+.++++.|+++ ++++++|+.....   +...|+++|++.+
T Consensus        65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~---~~~~l~~~gl~~~  109 (205)
T PRK13582         65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEF---AGPLMRQLGWPTL  109 (205)
T ss_pred             HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHH---HHHHHHHcCCchh
Confidence            4567899999999999999 9999999998863   4468888898764

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=98.45  E-value=4e-07  Score=79.70  Aligned_cols=62  Identities=27%  Similarity=0.426  Sum_probs=54.3

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      +..++++||+||||.+-                           ..++||+.+++++|+++|.+++|+||++...++...
T Consensus         6 ~~y~~~l~DlDGvl~~G---------------------------~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~   58 (269)
T COG0647           6 DKYDGFLFDLDGVLYRG---------------------------NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVA   58 (269)
T ss_pred             hhcCEEEEcCcCceEeC---------------------------CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Confidence            46789999999999953                           278999999999999999999999999998888788


Q ss_pred             HHHHH-CCCC
Q 028215          188 KNLLF-AGYS  196 (212)
Q Consensus       188 ~nL~~-~G~~  196 (212)
                      +.|.. .|.+
T Consensus        59 ~~L~~~~~~~   68 (269)
T COG0647          59 ARLSSLGGVD   68 (269)
T ss_pred             HHHHhhcCCC
Confidence            88988 5553

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=98.45  E-value=4.3e-07  Score=77.99  Aligned_cols=58  Identities=22%  Similarity=0.149  Sum_probs=46.6

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.+++||||||+++.                          ...-|.+.+.+++|+++|++++++|||+....   ...
T Consensus         3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~   53 (270)
T PRK10513          3 IKLIAIDMDGTLLLPD--------------------------HTISPAVKQAIAAARAKGVNVVLTTGRPYAGV---HRY   53 (270)
T ss_pred             eEEEEEecCCcCcCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEecCCChHHH---HHH
Confidence            5789999999999751                          14567889999999999999999999997643   345


Q ss_pred             HHHCCCC
Q 028215          190 LLFAGYS  196 (212)
Q Consensus       190 L~~~G~~  196 (212)
                      ++..|+.
T Consensus        54 ~~~l~~~   60 (270)
T PRK10513         54 LKELHME   60 (270)
T ss_pred             HHHhCCC
Confidence            6666764

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=98.43  E-value=4.5e-07  Score=75.52  Aligned_cols=57  Identities=21%  Similarity=0.190  Sum_probs=44.3

Q ss_pred             EEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHH
Q 028215          113 WVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF  192 (212)
Q Consensus       113 vvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~  192 (212)
                      ++|||||||+++..                          ...|.+.+.+++|+++|++++++|||+.....   +-++.
T Consensus         1 i~~DlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~---~~~~~   51 (225)
T TIGR01482         1 IASDIDGTLTDPNR--------------------------AINESALEAIRKAESVGIPVVLVTGNSVQFAR---ALAKL   51 (225)
T ss_pred             CeEeccCccCCCCc--------------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHH---HHHHH
Confidence            58999999998621                          35577889999999999999999999986544   45566


Q ss_pred             CCCCCC
Q 028215          193 AGYSDW  198 (212)
Q Consensus       193 ~G~~~~  198 (212)
                      .|++.+
T Consensus        52 l~~~~~   57 (225)
T TIGR01482        52 IGTPDP   57 (225)
T ss_pred             hCCCCe
Confidence            676543

catalyze the same reaction as SPP.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.42  E-value=5.9e-07  Score=77.89  Aligned_cols=60  Identities=23%  Similarity=0.163  Sum_probs=48.4

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.+++||||||+++.                          ....+++.+.+++|+++|++++++|||+...   ....
T Consensus         4 ~kli~~DlDGTLl~~~--------------------------~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~---~~~~   54 (273)
T PRK00192          4 KLLVFTDLDGTLLDHH--------------------------TYSYEPAKPALKALKEKGIPVIPCTSKTAAE---VEVL   54 (273)
T ss_pred             ceEEEEcCcccCcCCC--------------------------CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHH
Confidence            6799999999999741                          1356789999999999999999999998754   3356


Q ss_pred             HHHCCCCCC
Q 028215          190 LLFAGYSDW  198 (212)
Q Consensus       190 L~~~G~~~~  198 (212)
                      +++.|+..+
T Consensus        55 ~~~l~l~~~   63 (273)
T PRK00192         55 RKELGLEDP   63 (273)
T ss_pred             HHHcCCCCC
Confidence            777787654

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=98.41  E-value=7.5e-07  Score=76.47  Aligned_cols=60  Identities=27%  Similarity=0.274  Sum_probs=48.8

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      .++.++|||||||++..                          ....+.+.+.+++++++|++++++|||+-..   ...
T Consensus         2 ~~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~---~~~   52 (264)
T COG0561           2 MIKLLAFDLDGTLLDSN--------------------------KTISPETKEALARLREKGVKVVLATGRPLPD---VLS   52 (264)
T ss_pred             CeeEEEEcCCCCccCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEECCCChHH---HHH
Confidence            36799999999999862                          1477889999999999999999999999753   345


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .++..|+..
T Consensus        53 ~~~~l~~~~   61 (264)
T COG0561          53 ILEELGLDG   61 (264)
T ss_pred             HHHHcCCCc
Confidence            666667764

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=98.41  E-value=2.3e-07  Score=72.78  Aligned_cols=52  Identities=17%  Similarity=0.312  Sum_probs=42.4

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC-CeEEee
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW-KKLFLR  204 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~-~~Lilr  204 (212)
                      ...++.||+.++++.|+++|++++++|+.+..   .....|++.|+..+ +.++..
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~---~~~~~l~~~~~~~~f~~i~~~  126 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRE---RIERVLERLGLDDYFDEIISS  126 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSEHH---HHHHHHHHTTHGGGCSEEEEG
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCCcc---ccccccccccccccccccccc
Confidence            56799999999999999999999999999764   34478888888865 455544

...

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=98.41  E-value=9.5e-07  Score=70.72  Aligned_cols=45  Identities=22%  Similarity=0.194  Sum_probs=36.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      .++.||+.++++.|+++|++++++||.+... .   ..+.+.|+..+..
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~---~~~~~~~l~~~f~  128 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-A---VLVQELGLRDLFD  128 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-H---HHHHhcCCHHHCC
Confidence            6889999999999999999999999998754 2   3334478876543

HAD subfamilies caused by an overly broad single model.

>PRK09449 dUMP phosphatase; Provisional

Probab=98.41  E-value=1.2e-06  Score=73.10  Aligned_cols=48  Identities=19%  Similarity=0.243  Sum_probs=38.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..+++||+.++++.|+ +|++++++||.+..   .+...|++.|+..|...+
T Consensus        93 ~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~---~~~~~l~~~~l~~~fd~v  140 (224)
T PRK09449         93 ICTPLPGAVELLNALR-GKVKMGIITNGFTE---LQQVRLERTGLRDYFDLL  140 (224)
T ss_pred             cCccCccHHHHHHHHH-hCCeEEEEeCCcHH---HHHHHHHhCChHHHcCEE
Confidence            3578999999999999 68999999998764   344678888987764333

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=98.39  E-value=8.6e-07  Score=75.29  Aligned_cols=56  Identities=25%  Similarity=0.244  Sum_probs=45.1

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHH
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL  191 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~  191 (212)
                      .|+|||||||++..                           ...|++.+.+++|+++|++++++|||+...   ....++
T Consensus         1 li~~DlDGTLl~~~---------------------------~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~---~~~~~~   50 (225)
T TIGR02461         1 VIFTDLDGTLLPPG---------------------------YEPGPAREALEELKDLGFPIVFVSSKTRAE---QEYYRE   50 (225)
T ss_pred             CEEEeCCCCCcCCC---------------------------CCchHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHH
Confidence            37899999999741                           245678999999999999999999999764   335677


Q ss_pred             HCCCCC
Q 028215          192 FAGYSD  197 (212)
Q Consensus       192 ~~G~~~  197 (212)
                      +.|+..
T Consensus        51 ~lg~~~   56 (225)
T TIGR02461        51 ELGVEP   56 (225)
T ss_pred             HcCCCC
Confidence            788754

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=98.38  E-value=1e-06  Score=71.38  Aligned_cols=77  Identities=22%  Similarity=0.322  Sum_probs=54.5

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh---------
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF---------  181 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~---------  181 (212)
                      ++++||.||||..+.+.         .|....      ....+++||+.++|++|+++|++++++||.+..         
T Consensus         2 ~~~~~d~dg~l~~~~~~---------~~~~~~------~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~   66 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPS---------DFQVDA------LEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQAD   66 (161)
T ss_pred             CEEEEeCCCCccccCCC---------ccccCC------HHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHH
Confidence            68999999999986331         110000      012378999999999999999999999997421         


Q ss_pred             ---chHHHHHHHHHCCCCCCCeEEe
Q 028215          182 ---QRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       182 ---~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                         ....+.+.|..+|+. ++..+.
T Consensus        67 ~~~~~~~~~~~l~~~gl~-fd~ii~   90 (161)
T TIGR01261        67 FDGPHNLMLQIFRSQGII-FDDVLI   90 (161)
T ss_pred             HHHHHHHHHHHHHHCCCc-eeEEEE
Confidence               123455668899998 666655

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.38  E-value=8.3e-07  Score=76.89  Aligned_cols=59  Identities=14%  Similarity=0.119  Sum_probs=46.6

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      .++.|++||||||++...                          ...+.+.+.+++|+++|++++++|||+.....   .
T Consensus         6 ~~~lI~~DlDGTLL~~~~--------------------------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~---~   56 (271)
T PRK03669          6 DPLLIFTDLDGTLLDSHT--------------------------YDWQPAAPWLTRLREAQVPVILCSSKTAAEML---P   56 (271)
T ss_pred             CCeEEEEeCccCCcCCCC--------------------------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHH---H
Confidence            478999999999997511                          23467889999999999999999999976443   4


Q ss_pred             HHHHCCCC
Q 028215          189 NLLFAGYS  196 (212)
Q Consensus       189 nL~~~G~~  196 (212)
                      .++..|+.
T Consensus        57 ~~~~l~~~   64 (271)
T PRK03669         57 LQQTLGLQ   64 (271)
T ss_pred             HHHHhCCC
Confidence            56666774

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=98.38  E-value=1.1e-06  Score=71.63  Aligned_cols=76  Identities=20%  Similarity=0.274  Sum_probs=52.7

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc-------
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ-------  182 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~-------  182 (212)
                      .|+++||.||||..+...+..           .+..      ..++||+.+++++|+++|++++++||.+...       
T Consensus         3 ~~~~~~d~~~t~~~~~~~~~~-----------~~~~------~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~   65 (181)
T PRK08942          3 MKAIFLDRDGVINVDSDGYVK-----------SPDE------WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEA   65 (181)
T ss_pred             ccEEEEECCCCcccCCccccC-----------CHHH------eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHH
Confidence            689999999998766422211           1222      2789999999999999999999999986310       


Q ss_pred             -----hHHHHHHHHHCCCCCCCeEEe
Q 028215          183 -----RNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       183 -----~~~T~~nL~~~G~~~~~~Lil  203 (212)
                           .+.....|++.|+. ++..+.
T Consensus        66 ~~~~~~~~~~~~l~~~g~~-f~~i~~   90 (181)
T PRK08942         66 QLNALHEKMDWSLADRGGR-LDGIYY   90 (181)
T ss_pred             HHHHHHHHHHHHHHHcCCc-cceEEE
Confidence                 12233456677874 555554

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=98.37  E-value=8.6e-07  Score=73.54  Aligned_cols=56  Identities=30%  Similarity=0.397  Sum_probs=45.3

Q ss_pred             EEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHH
Q 028215          113 WVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF  192 (212)
Q Consensus       113 vvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~  192 (212)
                      |++||||||+++.                          ..+-|.+++.++.|+++|++++++|||+...   ....+..
T Consensus         1 i~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~---~~~~~~~   51 (254)
T PF08282_consen    1 IFSDLDGTLLNSD--------------------------GKISPETIEALKELQEKGIKLVIATGRSYSS---IKRLLKE   51 (254)
T ss_dssp             EEEECCTTTCSTT--------------------------SSSCHHHHHHHHHHHHTTCEEEEECSSTHHH---HHHHHHH
T ss_pred             cEEEECCceecCC--------------------------CeeCHHHHHHHHhhcccceEEEEEccCcccc---ccccccc
Confidence            6899999999741                          1466899999999999999999999999764   3456666


Q ss_pred             CCCCC
Q 028215          193 AGYSD  197 (212)
Q Consensus       193 ~G~~~  197 (212)
                      .++..
T Consensus        52 ~~~~~   56 (254)
T PF08282_consen   52 LGIDD   56 (254)
T ss_dssp             TTHCS
T ss_pred             ccchh
Confidence            77763

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.36  E-value=2.2e-06  Score=68.96  Aligned_cols=46  Identities=24%  Similarity=0.273  Sum_probs=38.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ..++.||+.++++.|+++|++++++|+......+   ..++..|+..+.
T Consensus        70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~---~~l~~~~l~~~f  115 (188)
T TIGR01489        70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFID---PVLEGIGEKDVF  115 (188)
T ss_pred             hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHH---HHHHHcCChhhe
Confidence            4689999999999999999999999999875433   567778887654

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=98.36  E-value=1.5e-06  Score=70.62  Aligned_cols=44  Identities=16%  Similarity=0.129  Sum_probs=35.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ..++.||+.++|+.|+   ++++++||.+...   ....|++.|+..|..
T Consensus        82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~---~~~~l~~~gl~~~fd  125 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAH---ARRALNRLGIEDCFD  125 (184)
T ss_pred             hCCCCHHHHHHHHhCC---CCEEEEeCCCHHH---HHHHHHHcCcHhhhC
Confidence            3568999999999997   5799999998753   447788889987643

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=98.36  E-value=8.3e-07  Score=72.22  Aligned_cols=52  Identities=23%  Similarity=0.374  Sum_probs=40.9

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCCh
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNE  180 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~  180 (212)
                      ++++||.||||+...+|-         ...+         ...++||+.++|++|+++|++++++||.+.
T Consensus         2 ~~~~~D~Dgtl~~~~~~~---------~~~~---------~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~   53 (176)
T TIGR00213         2 KAIFLDRDGTINIDHGYV---------HEID---------NFEFIDGVIDALRELKKMGYALVLVTNQSG   53 (176)
T ss_pred             CEEEEeCCCCEeCCCCCC---------CCHH---------HeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence            689999999999643221         0111         237899999999999999999999999885

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.35  E-value=8.3e-07  Score=68.99  Aligned_cols=67  Identities=22%  Similarity=0.257  Sum_probs=44.9

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCC-ChhchHHHHHH
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGR-NEFQRNTTEKN  189 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR-~~~~~~~T~~n  189 (212)
                      ++++||+||||++....  .+  ..   ++ .    +..  .+++||+.++++.|+++|++++++|++ +....   ...
T Consensus         1 kli~~DlD~Tl~~~~~~--~~--~~---~~-~----~~~--~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~---~~~   63 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENI--VV--GE---DP-I----IDL--EVTIKEIRDKLQTLKKNGFLLALASYNDDPHVA---YEL   63 (128)
T ss_pred             CEEEEeCCCCCCCCCcc--cc--cC---Cc-c----hhh--HHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHH---HHH
Confidence            57899999999975210  00  00   00 0    000  068999999999999999999999999 55432   345


Q ss_pred             HHHCC
Q 028215          190 LLFAG  194 (212)
Q Consensus       190 L~~~G  194 (212)
                      |+..|
T Consensus        64 l~~~~   68 (128)
T TIGR01681        64 LKIFE   68 (128)
T ss_pred             HHhcc
Confidence            55555

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=98.35  E-value=1.8e-06  Score=72.43  Aligned_cols=81  Identities=17%  Similarity=0.149  Sum_probs=53.4

Q ss_pred             CceEEEecCCCCCCChhhHhh-hcCCCC--------------CC-----------CHHHHHHHHH--hcCCCCChhHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAA-HGFGSE--------------IF-----------NEDAFDEWVD--LAKAPALPASLTF  161 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~-~~~g~~--------------~~-----------~~~~~~~wv~--~~~~~~~pg~lel  161 (212)
                      +.+++||.||||+++...+.- ..++..              .+           .....++...  ....++.||+.++
T Consensus         3 ~~~vifDfDgTi~~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~pG~~e~   82 (219)
T PRK09552          3 SIQIFCDFDGTITNNDNIIAIMKKFAPPEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLLETAEIREGFHEF   82 (219)
T ss_pred             CcEEEEcCCCCCCcchhhHHHHHHhCHHHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHHhCCCcCcCHHHH
Confidence            458999999999988775531 123210              00           0000111111  1357899999999


Q ss_pred             HHHHHHCCCeEEEEcCCChhchHHHHHHHHHC
Q 028215          162 YKELKQLGFKIFLLTGRNEFQRNTTEKNLLFA  193 (212)
Q Consensus       162 l~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~  193 (212)
                      ++.|+++|++++++||......+   ..|++.
T Consensus        83 l~~l~~~g~~~~IvS~~~~~~i~---~il~~~  111 (219)
T PRK09552         83 VQFVKENNIPFYVVSGGMDFFVY---PLLQGL  111 (219)
T ss_pred             HHHHHHcCCeEEEECCCcHHHHH---HHHHHh
Confidence            99999999999999999875444   455555

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=98.34  E-value=1.2e-06  Score=74.89  Aligned_cols=57  Identities=26%  Similarity=0.334  Sum_probs=45.3

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHH
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL  191 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~  191 (212)
                      .++|||||||++..                          ...-+.+.+.+++|+++|++++++|||+...   ....+.
T Consensus         1 li~~DlDGTLl~~~--------------------------~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~---~~~~~~   51 (256)
T TIGR00099         1 LIFIDLDGTLLNDD--------------------------HTISPSTKEALAKLREKGIKVVLATGRPYKE---VKNILK   51 (256)
T ss_pred             CEEEeCCCCCCCCC--------------------------CccCHHHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHH
Confidence            37899999999751                          1456788999999999999999999999653   335667


Q ss_pred             HCCCCC
Q 028215          192 FAGYSD  197 (212)
Q Consensus       192 ~~G~~~  197 (212)
                      +.|+..
T Consensus        52 ~~~~~~   57 (256)
T TIGR00099        52 ELGLDT   57 (256)
T ss_pred             HcCCCC
Confidence            777763

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PTZ00174 phosphomannomutase; Provisional

Probab=98.34  E-value=9e-07  Score=75.88  Aligned_cols=48  Identities=29%  Similarity=0.320  Sum_probs=41.1

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      ...+.|++||||||+++.                          ....|.+.+.+++++++|++++++|||+..
T Consensus         3 ~~~klia~DlDGTLL~~~--------------------------~~is~~~~~ai~~l~~~Gi~~viaTGR~~~   50 (247)
T PTZ00174          3 MKKTILLFDVDGTLTKPR--------------------------NPITQEMKDTLAKLKSKGFKIGVVGGSDYP   50 (247)
T ss_pred             CCCeEEEEECcCCCcCCC--------------------------CCCCHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence            357899999999999762                          145677899999999999999999999875

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=98.33  E-value=8.1e-07  Score=73.39  Aligned_cols=91  Identities=21%  Similarity=0.180  Sum_probs=64.5

Q ss_pred             CCCCceEEEecCCCCCCChhhHhh--hcCCCCCC----CHHHHHHHHHhc--CCCCChhHHHHHHHHHHCCCeEEEEcCC
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAA--HGFGSEIF----NEDAFDEWVDLA--KAPALPASLTFYKELKQLGFKIFLLTGR  178 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~--~~~g~~~~----~~~~~~~wv~~~--~~~~~pg~lell~~Lk~~G~kI~~vTgR  178 (212)
                      +..+-+|-||||+|+|-++|++..  ..|....+    ++..|++-....  -.-|.+-+.+|+...+.+|-+|+|+|||
T Consensus        60 G~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGR  139 (237)
T COG3700          60 GRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGR  139 (237)
T ss_pred             CCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecC
Confidence            446779999999999999886543  22332222    245566555432  3467778899999999999999999999


Q ss_pred             ChhchHHHHHHHHH-CCCCC
Q 028215          179 NEFQRNTTEKNLLF-AGYSD  197 (212)
Q Consensus       179 ~~~~~~~T~~nL~~-~G~~~  197 (212)
                      +....+.+.+.|.+ +.+..
T Consensus       140 t~gk~d~vsk~Lak~F~i~~  159 (237)
T COG3700         140 TPGKTDTVSKTLAKNFHITN  159 (237)
T ss_pred             CCCcccccchhHHhhcccCC
Confidence            98876666666643 45543

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.32  E-value=3.8e-07  Score=73.01  Aligned_cols=70  Identities=17%  Similarity=0.210  Sum_probs=47.3

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .++++|||||||+++..++...+  .  +    .      ..-...++.  .+++|+++|++++++||++..   .+...
T Consensus         1 ~~~~~~D~Dgtl~~~~~~~~~~~--~--~----~------~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~---~~~~~   61 (154)
T TIGR01670         1 IRLLILDVDGVLTDGKIYYTNNG--E--E----I------KAFNVRDGY--GIRCALKSGIEVAIITGRKAK---LVEDR   61 (154)
T ss_pred             CeEEEEeCceeEEcCeEEECCCC--c--E----E------EEEechhHH--HHHHHHHCCCEEEEEECCCCH---HHHHH
Confidence            36899999999998754332210  0  0    0      000122232  799999999999999999875   34478


Q ss_pred             HHHCCCCCC
Q 028215          190 LLFAGYSDW  198 (212)
Q Consensus       190 L~~~G~~~~  198 (212)
                      ++++|+..+
T Consensus        62 l~~~gi~~~   70 (154)
T TIGR01670        62 CKTLGITHL   70 (154)
T ss_pred             HHHcCCCEE
Confidence            888998854

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=98.31  E-value=3e-06  Score=70.20  Aligned_cols=47  Identities=21%  Similarity=0.246  Sum_probs=33.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..++.||+.++++.|+++|++++++||.+..... ....+...|+..+
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~-~~~~~~~~~l~~~  138 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHS-AEEALLPGDIMAL  138 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccch-hhhHhhhhhhHhh
Confidence            4578999999999999999999999997654321 1223444555433

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=98.29  E-value=1.8e-06  Score=73.97  Aligned_cols=57  Identities=21%  Similarity=0.171  Sum_probs=45.4

Q ss_pred             EEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHH
Q 028215          113 WVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF  192 (212)
Q Consensus       113 vvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~  192 (212)
                      +++||||||+++..                          ..++.+.+.+++|+++|++++++|||+...   ....+++
T Consensus         2 i~~DlDGTll~~~~--------------------------~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~---~~~~~~~   52 (256)
T TIGR01486         2 IFTDLDGTLLDPHG--------------------------YDWGPAKEVLERLQELGIPVIPCTSKTAAE---VEYLRKE   52 (256)
T ss_pred             EEEcCCCCCcCCCC--------------------------cCchHHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHH
Confidence            78999999997521                          244568999999999999999999999764   3467778


Q ss_pred             CCCCCC
Q 028215          193 AGYSDW  198 (212)
Q Consensus       193 ~G~~~~  198 (212)
                      .|++.+
T Consensus        53 ~~~~~~   58 (256)
T TIGR01486        53 LGLEDP   58 (256)
T ss_pred             cCCCCc
Confidence            888643

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=98.29  E-value=1.5e-06  Score=72.66  Aligned_cols=55  Identities=18%  Similarity=0.222  Sum_probs=43.3

Q ss_pred             EEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHH
Q 028215          113 WVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF  192 (212)
Q Consensus       113 vvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~  192 (212)
                      |++||||||+++..                          ...+.+.+.++.|+++|++++++|||+.....   ..++.
T Consensus         2 i~~DlDGTLL~~~~--------------------------~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~---~~~~~   52 (221)
T TIGR02463         2 VFSDLDGTLLDSHS--------------------------YDWQPAAPWLTRLQEAGIPVILCTSKTAAEVE---YLQKA   52 (221)
T ss_pred             EEEeCCCCCcCCCC--------------------------CCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHH---HHHHH
Confidence            78999999997511                          24555889999999999999999999986444   45566


Q ss_pred             CCCC
Q 028215          193 AGYS  196 (212)
Q Consensus       193 ~G~~  196 (212)
                      .|+.
T Consensus        53 l~~~   56 (221)
T TIGR02463        53 LGLT   56 (221)
T ss_pred             cCCC
Confidence            6765

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PHA02597 30

Probab=98.28  E-value=3.4e-06  Score=69.22  Aligned_cols=71  Identities=17%  Similarity=0.201  Sum_probs=44.7

Q ss_pred             CceEEEecCCCCCCChh----hHhhhcCC---------CC---------CCCHHH----HHHHHH---hcCCCCChhHHH
Q 028215          110 KDAWVFDIDETLLSNLP----YYAAHGFG---------SE---------IFNEDA----FDEWVD---LAKAPALPASLT  160 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~----~~~~~~~g---------~~---------~~~~~~----~~~wv~---~~~~~~~pg~le  160 (212)
                      .++||||+||||+|..+    ...+.++.         ..         +.+++.    +..+..   ....+++||+.+
T Consensus         2 ~k~viFDlDGTLiD~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~e   81 (197)
T PHA02597          2 KPTILTDVDGVLLSWQSGLPYFAQKYNIPTDHILKMIQDERFRDPGELFGCDQELAKKLIEKYNNSDFIRYLSAYDDALD   81 (197)
T ss_pred             CcEEEEecCCceEchhhccHHHHHhcCCCHHHHHHHHhHhhhcCHHHHhcccHHHHHHHhhhhhHHHHHHhccCCCCHHH
Confidence            57999999999999765    22222211         00         011111    222221   134679999999


Q ss_pred             HHHHHHHCCCeEEEEcCCChh
Q 028215          161 FYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       161 ll~~Lk~~G~kI~~vTgR~~~  181 (212)
                      ++++|++++ +++++|+.+..
T Consensus        82 ~L~~L~~~~-~~~i~Tn~~~~  101 (197)
T PHA02597         82 VINKLKEDY-DFVAVTALGDS  101 (197)
T ss_pred             HHHHHHhcC-CEEEEeCCccc
Confidence            999999975 67888887654

2 hypothetical protein; Provisional

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=98.27  E-value=4e-06  Score=69.44  Aligned_cols=49  Identities=18%  Similarity=0.308  Sum_probs=39.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..++.||+.+++++|+++ ++++++||.+....   ...|+++|+..|...+.
T Consensus        95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~---~~~l~~~~l~~~fd~i~  143 (224)
T TIGR02254        95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQ---YKRLRKSGLFPFFDDIF  143 (224)
T ss_pred             cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHH---HHHHHHCCcHhhcCEEE
Confidence            357899999999999999 99999999876533   35688889877644333

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=98.24  E-value=3.1e-06  Score=72.21  Aligned_cols=82  Identities=18%  Similarity=0.240  Sum_probs=59.3

Q ss_pred             CCCceEEEecCCCCCCChhhHhhh------cCCCCCCC-------------------------HHHHHHHHHh-------
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAH------GFGSEIFN-------------------------EDAFDEWVDL-------  149 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~------~~g~~~~~-------------------------~~~~~~wv~~-------  149 (212)
                      .+.-+++||+|||++||...|...      .+|. +|+                         +..+.++..+       
T Consensus         8 ~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk-~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~~   86 (222)
T KOG2914|consen    8 LKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGK-PYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILDR   86 (222)
T ss_pred             cceeeEEEecCCcEEecHHHHHHHHHHHHHHcCC-CChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence            356799999999999999887751      2332 221                         2122222221       


Q ss_pred             --cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHH
Q 028215          150 --AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL  190 (212)
Q Consensus       150 --~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL  190 (212)
                        ....++||+.+|++.|+.+|++++++|++++...+.-..++
T Consensus        87 ~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~  129 (222)
T KOG2914|consen   87 LFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRH  129 (222)
T ss_pred             hccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHh
Confidence              46789999999999999999999999999988776544444

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.24  E-value=2.8e-06  Score=75.22  Aligned_cols=59  Identities=14%  Similarity=0.014  Sum_probs=46.1

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      ++.|++||||||++...                          ...+.+.+.+++|+++|++|+++|||+.....   ..
T Consensus         1 ~KLIftDLDGTLLd~~~--------------------------~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~---~l   51 (302)
T PRK12702          1 MRLVLSSLDGSLLDLEF--------------------------NSYGAARQALAALERRSIPLVLYSLRTRAQLE---HL   51 (302)
T ss_pred             CcEEEEeCCCCCcCCCC--------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH---HH
Confidence            46899999999998522                          23456789999999999999999999986544   45


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      +++.|+..
T Consensus        52 ~~~Lgl~~   59 (302)
T PRK12702         52 CRQLRLEH   59 (302)
T ss_pred             HHHhCCCC
Confidence            56667764

>PLN02887 hydrolase family protein

Probab=98.24  E-value=3e-06  Score=81.45  Aligned_cols=59  Identities=20%  Similarity=0.172  Sum_probs=46.7

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.+.|++||||||+++.                          ...-+.+.+.+++++++|++++++|||+.....   .
T Consensus       307 ~iKLIa~DLDGTLLn~d--------------------------~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~---~  357 (580)
T PLN02887        307 KFSYIFCDMDGTLLNSK--------------------------SQISETNAKALKEALSRGVKVVIATGKARPAVI---D  357 (580)
T ss_pred             CccEEEEeCCCCCCCCC--------------------------CccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHH---H
Confidence            46799999999999752                          145678899999999999999999999976433   4


Q ss_pred             HHHHCCCC
Q 028215          189 NLLFAGYS  196 (212)
Q Consensus       189 nL~~~G~~  196 (212)
                      .++..|+.
T Consensus       358 ~l~~L~l~  365 (580)
T PLN02887        358 ILKMVDLA  365 (580)
T ss_pred             HHHHhCcc
Confidence            55555654

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=98.24  E-value=1.1e-06  Score=72.35  Aligned_cols=80  Identities=14%  Similarity=-0.007  Sum_probs=52.9

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHH----HHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCC-ChhchH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDE----WVDLAKAPALPASLTFYKELKQLGFKIFLLTGR-NEFQRN  184 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~----wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR-~~~~~~  184 (212)
                      ++.+|||+|+|+++.+-+--.    +.++.+..-++    -......+++||+.++++.|+++|++++++||+ +..   
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~---   74 (174)
T TIGR01685         2 PRVIVFDLDGTLWDHYMISLL----GGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPE---   74 (174)
T ss_pred             CcEEEEeCCCCCcCccccccc----CCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChH---
Confidence            578999999999975322111    12222111000    011234688999999999999999999999998 553   


Q ss_pred             HHHHHHHHCCCC
Q 028215          185 TTEKNLLFAGYS  196 (212)
Q Consensus       185 ~T~~nL~~~G~~  196 (212)
                      .....|..+|+.
T Consensus        75 ~~~~~L~~~~l~   86 (174)
T TIGR01685        75 WAYEILGTFEIT   86 (174)
T ss_pred             HHHHHHHhCCcC
Confidence            334677888876

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.22  E-value=5.6e-06  Score=84.54  Aligned_cols=44  Identities=20%  Similarity=0.351  Sum_probs=36.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC-CCC
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS-DWK  199 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~-~~~  199 (212)
                      .++||+.+++++|+++|++++++||......   ...|+++|+. .|.
T Consensus       161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~---~~~L~~~gl~~~~F  205 (1057)
T PLN02919        161 IGFPGALELITQCKNKGLKVAVASSADRIKV---DANLAAAGLPLSMF  205 (1057)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEeCCcHHHH---HHHHHHcCCChhHC
Confidence            4799999999999999999999999877543   3678889985 443

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=98.22  E-value=7e-06  Score=68.43  Aligned_cols=47  Identities=4%  Similarity=0.107  Sum_probs=37.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC-eEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK-KLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~-~Lil  203 (212)
                      ..++.||+.++++.|   +++++++||.+..   .+...|+++|+..|. ..+.
T Consensus        86 ~~~~~~gv~~~L~~L---~~~~~ivTn~~~~---~~~~~l~~~~l~~~F~~~v~  133 (221)
T PRK10563         86 ELEPIAGANALLESI---TVPMCVVSNGPVS---KMQHSLGKTGMLHYFPDKLF  133 (221)
T ss_pred             cCCcCCCHHHHHHHc---CCCEEEEeCCcHH---HHHHHHHhcChHHhCcceEe
Confidence            468899999999998   4999999998754   455678889998775 3443

>PRK11590 hypothetical protein; Provisional

Probab=98.21  E-value=1.3e-05  Score=67.13  Aligned_cols=41  Identities=17%  Similarity=0.192  Sum_probs=33.7

Q ss_pred             CCCChhHHHHH-HHHHHCCCeEEEEcCCChhchHHHHHHHHHCCC
Q 028215          152 APALPASLTFY-KELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGY  195 (212)
Q Consensus       152 ~~~~pg~lell-~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~  195 (212)
                      ..+.||+.+++ +.++++|++++++||+++..   +...+..+|+
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~---~~~il~~l~~  135 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPL---VEQVYFDTPW  135 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHH---HHHHHHHccc
Confidence            56799999999 57888999999999999863   3467777775

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=98.20  E-value=1.2e-05  Score=64.22  Aligned_cols=46  Identities=20%  Similarity=0.242  Sum_probs=38.4

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ...++.||+.++++.++++|++++++|+....   .+...++++|+..+
T Consensus        70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~---~i~~~~~~~g~~~~  115 (177)
T TIGR01488        70 RQVALRPGARELISWLKERGIDTVIVSGGFDF---FVEPVAEKLGIDDV  115 (177)
T ss_pred             hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHH---HHHHHHHHcCCchh
Confidence            45678899999999999999999999999875   44467788888754

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=98.20  E-value=5.6e-06  Score=68.28  Aligned_cols=31  Identities=16%  Similarity=0.471  Sum_probs=28.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhc
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQ  182 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~  182 (212)
                      .++.||+.++++.|+++|++++++||.+...
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~  113 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLH  113 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence            4689999999999999999999999988653

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=98.18  E-value=4e-06  Score=71.57  Aligned_cols=58  Identities=21%  Similarity=0.312  Sum_probs=49.2

Q ss_pred             EEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHH
Q 028215          113 WVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF  192 (212)
Q Consensus       113 vvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~  192 (212)
                      ++||+||||++..                           .++|++.+.++.++++|+++.++||.+...+....+.|.+
T Consensus         1 ~lfD~DGvL~~~~---------------------------~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~   53 (236)
T TIGR01460         1 FLFDIDGVLWLGH---------------------------KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSS   53 (236)
T ss_pred             CEEeCcCccCcCC---------------------------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence            5899999999862                           5688999999999999999999998776666677788888


Q ss_pred             -CCCCC
Q 028215          193 -AGYSD  197 (212)
Q Consensus       193 -~G~~~  197 (212)
                       .|++.
T Consensus        54 ~~g~~~   59 (236)
T TIGR01460        54 LLGVDV   59 (236)
T ss_pred             hcCCCC
Confidence             78764

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PRK06769 hypothetical protein; Validated

Probab=98.16  E-value=1.9e-06  Score=70.31  Aligned_cols=71  Identities=20%  Similarity=0.146  Sum_probs=50.0

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc-----h
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ-----R  183 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~-----~  183 (212)
                      +.++++||.||||--. ++                  +.......++||+.++|++|+++|++++++||.+...     .
T Consensus         3 ~~~~~~~d~d~~~~~~-~~------------------~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~   63 (173)
T PRK06769          3 NIQAIFIDRDGTIGGD-TT------------------IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATI   63 (173)
T ss_pred             CCcEEEEeCCCcccCC-CC------------------CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCH
Confidence            5789999999999421 00                  0001223789999999999999999999999987421     1


Q ss_pred             HHHHHHHHHCCCCCC
Q 028215          184 NTTEKNLLFAGYSDW  198 (212)
Q Consensus       184 ~~T~~nL~~~G~~~~  198 (212)
                      ..+...|+..|+..+
T Consensus        64 ~~~~~~l~~~g~~~~   78 (173)
T PRK06769         64 ADFVQELKGFGFDDI   78 (173)
T ss_pred             HHHHHHHHhCCcCEE
Confidence            234455778887653

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=98.11  E-value=9e-06  Score=69.18  Aligned_cols=44  Identities=18%  Similarity=0.240  Sum_probs=34.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..++.||+.++|+.|+++ ++++++||.+..        ++..|+..|...++
T Consensus       111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~--------~~~~gl~~~fd~i~  154 (238)
T PRK10748        111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ--------PELFGLGDYFEFVL  154 (238)
T ss_pred             cCCCCccHHHHHHHHHcC-CCEEEEECCCch--------HHHCCcHHhhceeE
Confidence            367889999999999875 999999997653        36678877655444

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=98.10  E-value=6.7e-06  Score=73.38  Aligned_cols=58  Identities=17%  Similarity=0.342  Sum_probs=48.0

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHC----CCeEEEEcCCChhchHHHH
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQL----GFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~----G~kI~~vTgR~~~~~~~T~  187 (212)
                      +++|||||||+++.                           +++|++.++++.|+++    |+++.++||..........
T Consensus         2 ~~ifD~DGvL~~g~---------------------------~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~   54 (321)
T TIGR01456         2 GFAFDIDGVLFRGK---------------------------KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARA   54 (321)
T ss_pred             EEEEeCcCceECCc---------------------------cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHH
Confidence            79999999999862                           5699999999999998    9999999998755444444


Q ss_pred             HHH-HHCCCC
Q 028215          188 KNL-LFAGYS  196 (212)
Q Consensus       188 ~nL-~~~G~~  196 (212)
                      +.| ++.|++
T Consensus        55 ~~l~~~lG~~   64 (321)
T TIGR01456        55 EEISSLLGVD   64 (321)
T ss_pred             HHHHHHcCCC
Confidence            555 888886

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.09  E-value=2.3e-05  Score=66.25  Aligned_cols=44  Identities=20%  Similarity=0.202  Sum_probs=38.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      .+..||+.++++.++++|++++++||.....   +..-.++.|+..+
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~l---v~~ia~~lg~d~~  119 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFL---VEPIAERLGIDYV  119 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHH---HHHHHHHhCCchh
Confidence            7899999999999999999999999999853   4466677899865

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=98.07  E-value=2e-05  Score=74.94  Aligned_cols=77  Identities=22%  Similarity=0.282  Sum_probs=55.5

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh------
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF------  181 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~------  181 (212)
                      +..++++||+||||+.+...   ..|   +.++++|.        .++||+.+.|+.|+++|++|+++||.+..      
T Consensus       166 ~~~Kia~fD~DGTLi~t~sg---~~~---~~~~~d~~--------~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~  231 (526)
T TIGR01663       166 GQEKIAGFDLDGTIIKTKSG---KVF---PKGPDDWQ--------IIFPEIPEKLKELEADGFKICIFTNQGGIARGKIN  231 (526)
T ss_pred             ccCcEEEEECCCCccccCCC---ccC---CCCHHHee--------ecccCHHHHHHHHHHCCCEEEEEECCcccccCccc
Confidence            45789999999999975220   001   12445551        25899999999999999999999997762      


Q ss_pred             ---chHHHHHHHHHCCCCCCC
Q 028215          182 ---QRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       182 ---~~~~T~~nL~~~G~~~~~  199 (212)
                         ....+...|+.+|++ ++
T Consensus       232 ~~~~~~ki~~iL~~lgip-fd  251 (526)
T TIGR01663       232 ADDFKAKIEAIVAKLGVP-FQ  251 (526)
T ss_pred             HHHHHHHHHHHHHHcCCc-eE
Confidence               113356778889998 54

Note that the EC number for the kinase function is: 2.7.1.78

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=98.00  E-value=3.6e-06  Score=66.85  Aligned_cols=92  Identities=17%  Similarity=0.152  Sum_probs=54.7

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCC-HHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFN-EDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~-~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      +++.+|+|+||||+.+..-- ........+. ......-.......+.||+.++|+.|+ +|++++++|+.+....+   
T Consensus         1 ~k~~lvldld~tl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~---   75 (148)
T smart00577        1 KKKTLVLDLDETLVHSTHRS-FKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYAD---   75 (148)
T ss_pred             CCcEEEEeCCCCeECCCCCc-CCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHH---
Confidence            36789999999999874200 0000000000 000000001123477999999999998 67999999999986544   


Q ss_pred             HHHHHCCCCC-C-CeEEeec
Q 028215          188 KNLLFAGYSD-W-KKLFLRY  205 (212)
Q Consensus       188 ~nL~~~G~~~-~-~~Lilr~  205 (212)
                      ..|+..|+.. + +.++-+.
T Consensus        76 ~il~~l~~~~~~f~~i~~~~   95 (148)
T smart00577       76 PVLDLLDPKKYFGYRRLFRD   95 (148)
T ss_pred             HHHHHhCcCCCEeeeEEECc
Confidence            4566777743 3 4455543

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=98.00  E-value=1.3e-05  Score=65.91  Aligned_cols=47  Identities=30%  Similarity=0.480  Sum_probs=39.2

Q ss_pred             EEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchH
Q 028215          113 WVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRN  184 (212)
Q Consensus       113 vvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~  184 (212)
                      ++||+||||+++..                         .++-|.+.+.+++|+++|++++++|||+.....
T Consensus         2 i~~D~DgTL~~~~~-------------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~   48 (204)
T TIGR01484         2 LFFDLDGTLLDPNA-------------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIK   48 (204)
T ss_pred             EEEeCcCCCcCCCC-------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence            78999999997410                         146689999999999999999999999986444

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=97.96  E-value=2.2e-05  Score=76.47  Aligned_cols=61  Identities=20%  Similarity=0.180  Sum_probs=47.0

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTT  186 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T  186 (212)
                      +-.++.|++||||||+++..                          ...+.+.+.++.|+++|++++++|||+.....  
T Consensus       413 ~~~~KLIfsDLDGTLLd~d~--------------------------~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~--  464 (694)
T PRK14502        413 GQFKKIVYTDLDGTLLNPLT--------------------------YSYSTALDALRLLKDKELPLVFCSAKTMGEQD--  464 (694)
T ss_pred             CceeeEEEEECcCCCcCCCC--------------------------ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHH--
Confidence            34678999999999998621                          23356788999999999999999999976433  


Q ss_pred             HHHHHHCCCC
Q 028215          187 EKNLLFAGYS  196 (212)
Q Consensus       187 ~~nL~~~G~~  196 (212)
                       ..++..|+.
T Consensus       465 -~l~~~Lgl~  473 (694)
T PRK14502        465 -LYRNELGIK  473 (694)
T ss_pred             -HHHHHcCCC
Confidence             455666765

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=97.93  E-value=4.5e-05  Score=68.42  Aligned_cols=45  Identities=16%  Similarity=0.223  Sum_probs=36.6

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCC
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSD  197 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~  197 (212)
                      ...++.||+.++++.|++.|++++++||......+   ..+++.|+..
T Consensus       178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~---~l~~~Lgld~  222 (322)
T PRK11133        178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFAD---YLRDKLRLDA  222 (322)
T ss_pred             HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHH---HHHHHcCCCe
Confidence            35789999999999999999999999998865433   4556678764

>PLN02423 phosphomannomutase

Probab=97.92  E-value=1.9e-05  Score=67.86  Aligned_cols=47  Identities=28%  Similarity=0.398  Sum_probs=37.3

Q ss_pred             CCCceEE-EecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          108 DGKDAWV-FDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       108 ~~~~avv-fDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      .++++++ |||||||+++.                          ...-|.+.+.+++|+++ ++++++|||+..
T Consensus         4 ~~~~~i~~~D~DGTLl~~~--------------------------~~i~~~~~~ai~~l~~~-i~fviaTGR~~~   51 (245)
T PLN02423          4 RKPGVIALFDVDGTLTAPR--------------------------KEATPEMLEFMKELRKV-VTVGVVGGSDLS   51 (245)
T ss_pred             CccceEEEEeccCCCcCCC--------------------------CcCCHHHHHHHHHHHhC-CEEEEECCcCHH
Confidence            3566666 99999999752                          13457889999999977 999999999653

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=97.90  E-value=3.5e-05  Score=63.14  Aligned_cols=44  Identities=14%  Similarity=0.101  Sum_probs=36.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..+.|++.++++.++++|++++++|+.++...+   ..++..|+..+
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~---~~~~~lg~~~~  129 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVK---PLARILGIDNA  129 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHH---HHHHHcCCcce
Confidence            468999999999999999999999999986444   56677788754

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=97.87  E-value=5.9e-05  Score=61.24  Aligned_cols=62  Identities=26%  Similarity=0.286  Sum_probs=47.9

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      .+.+++++|+|||++..                         ....+.|++.+++++|+++|++++++||.+...  ...
T Consensus        23 ~~v~~vv~D~Dgtl~~~-------------------------~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~--~~~   75 (170)
T TIGR01668        23 VGIKGVVLDKDNTLVYP-------------------------DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQ--RAK   75 (170)
T ss_pred             CCCCEEEEecCCccccC-------------------------CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHH--HHH
Confidence            46789999999999853                         113688999999999999999999999987321  223


Q ss_pred             HHHHHCCCC
Q 028215          188 KNLLFAGYS  196 (212)
Q Consensus       188 ~nL~~~G~~  196 (212)
                      ..++..|+.
T Consensus        76 ~~~~~~gl~   84 (170)
T TIGR01668        76 AVEKALGIP   84 (170)
T ss_pred             HHHHHcCCE
Confidence            445667765

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=97.86  E-value=3e-05  Score=66.28  Aligned_cols=62  Identities=16%  Similarity=0.058  Sum_probs=45.5

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHH
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL  190 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL  190 (212)
                      ..|+.|+||||++...                       ...+..|...+++++++++|++++++|||+.....   .-+
T Consensus         2 ~li~tDlDGTLl~~~~-----------------------~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~---~~~   55 (249)
T TIGR01485         2 LLLVSDLDNTLVDHTD-----------------------GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYK---ELQ   55 (249)
T ss_pred             eEEEEcCCCcCcCCCC-----------------------CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHH---HHH
Confidence            3688999999997310                       01145688899999999999999999999975433   445


Q ss_pred             HHCCCCCC
Q 028215          191 LFAGYSDW  198 (212)
Q Consensus       191 ~~~G~~~~  198 (212)
                      +.+++...
T Consensus        56 ~~~~~~~p   63 (249)
T TIGR01485        56 KQKPLLTP   63 (249)
T ss_pred             hcCCCCCC
Confidence            55676543

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.86  E-value=1.8e-05  Score=65.09  Aligned_cols=71  Identities=20%  Similarity=0.231  Sum_probs=45.5

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ++++++||+||||+++.-++...+-....|+        .      ..  ...++.|+++|++++++|||+..   .+..
T Consensus        20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~--------~------~d--~~~i~~L~~~Gi~v~I~T~~~~~---~v~~   80 (183)
T PRK09484         20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFN--------V------RD--GYGIRCLLTSGIEVAIITGRKSK---LVED   80 (183)
T ss_pred             CceEEEEcCCeeeecCEEEEcCCCCEEEEEe--------c------cc--hHHHHHHHHCCCEEEEEeCCCcH---HHHH
Confidence            5889999999999986322111100000110        0      11  23677888999999999999875   3446


Q ss_pred             HHHHCCCCCC
Q 028215          189 NLLFAGYSDW  198 (212)
Q Consensus       189 nL~~~G~~~~  198 (212)
                      .++++|+..+
T Consensus        81 ~l~~lgl~~~   90 (183)
T PRK09484         81 RMTTLGITHL   90 (183)
T ss_pred             HHHHcCCcee
Confidence            7788888753

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=97.84  E-value=8.8e-05  Score=62.20  Aligned_cols=44  Identities=11%  Similarity=0.133  Sum_probs=37.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..++.||+.++++.++++| +++++||....   .+...+++.|+..+
T Consensus        66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~~~---~~~~il~~lgi~~~  109 (203)
T TIGR02137        66 TLKPLEGAVEFVDWLRERF-QVVILSDTFYE---FSQPLMRQLGFPTL  109 (203)
T ss_pred             hCCCCccHHHHHHHHHhCC-eEEEEeCChHH---HHHHHHHHcCCchh
Confidence            4588999999999999985 99999999875   45567888899854

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=97.79  E-value=3.7e-05  Score=66.93  Aligned_cols=62  Identities=21%  Similarity=0.171  Sum_probs=45.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHH-CCCeEEEEcCCChhchHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQ-LGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~-~G~kI~~vTgR~~~~~~~T~  187 (212)
                      ...+++||+||||++..+.                     .....+-|.+.+.|+.|++ .|++++++|||+.....   
T Consensus        13 ~~~li~~D~DGTLl~~~~~---------------------p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~---   68 (266)
T PRK10187         13 ANYAWFFDLDGTLAEIKPH---------------------PDQVVVPDNILQGLQLLATANDGALALISGRSMVELD---   68 (266)
T ss_pred             CCEEEEEecCCCCCCCCCC---------------------cccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHH---
Confidence            3468999999999974110                     0113567899999999998 79999999999986443   


Q ss_pred             HHHHHCC
Q 028215          188 KNLLFAG  194 (212)
Q Consensus       188 ~nL~~~G  194 (212)
                      +++...+
T Consensus        69 ~~~~~~~   75 (266)
T PRK10187         69 ALAKPYR   75 (266)
T ss_pred             HhcCccc
Confidence            4454444

>PRK08238 hypothetical protein; Validated

Probab=97.74  E-value=0.00011  Score=69.33  Aligned_cols=85  Identities=18%  Similarity=0.171  Sum_probs=56.1

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhc--CCCCCCC-----------HHHHHHHHH------hcCCCCChhHHHHHHHHHHC
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHG--FGSEIFN-----------EDAFDEWVD------LAKAPALPASLTFYKELKQL  168 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~--~g~~~~~-----------~~~~~~wv~------~~~~~~~pg~lell~~Lk~~  168 (212)
                      ......+||+||||+.+.-.+...-  ....|+.           .....+...      ....|..||+.+++++++++
T Consensus         8 ~~~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~~~d~~~lp~~pga~e~L~~lk~~   87 (479)
T PRK08238          8 SRDLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRVDLDVATLPYNEEVLDYLRAERAA   87 (479)
T ss_pred             CCCCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhcCCChhhCCCChhHHHHHHHHHHC
Confidence            3456899999999998766544311  1111111           011111111      13456789999999999999


Q ss_pred             CCeEEEEcCCChhchHHHHHHHHHCCC
Q 028215          169 GFKIFLLTGRNEFQRNTTEKNLLFAGY  195 (212)
Q Consensus       169 G~kI~~vTgR~~~~~~~T~~nL~~~G~  195 (212)
                      |++++++|++++...+   ..++..|+
T Consensus        88 G~~v~LaTas~~~~a~---~i~~~lGl  111 (479)
T PRK08238         88 GRKLVLATASDERLAQ---AVAAHLGL  111 (479)
T ss_pred             CCEEEEEeCCCHHHHH---HHHHHcCC
Confidence            9999999999986444   56667786

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=97.73  E-value=2.5e-05  Score=63.88  Aligned_cols=72  Identities=11%  Similarity=0.106  Sum_probs=50.6

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..+++|||+|||+.|..-+|...+-.-..|+              ...|  .-++.|+++|++++++||++..   .+..
T Consensus         6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~--------------~~D~--~~~~~L~~~Gi~laIiT~k~~~---~~~~   66 (169)
T TIGR02726         6 NIKLVILDVDGVMTDGRIVINDEGIESRNFD--------------IKDG--MGVIVLQLCGIDVAIITSKKSG---AVRH   66 (169)
T ss_pred             cCeEEEEeCceeeECCeEEEcCCCcEEEEEe--------------cchH--HHHHHHHHCCCEEEEEECCCcH---HHHH
Confidence            4789999999999998665554321111221              1122  2477889999999999999875   4457


Q ss_pred             HHHHCCCCCCC
Q 028215          189 NLLFAGYSDWK  199 (212)
Q Consensus       189 nL~~~G~~~~~  199 (212)
                      .|+.+|+..|.
T Consensus        67 ~l~~lgi~~~f   77 (169)
T TIGR02726        67 RAEELKIKRFH   77 (169)
T ss_pred             HHHHCCCcEEE
Confidence            88889998654

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=97.73  E-value=7.1e-05  Score=66.21  Aligned_cols=63  Identities=27%  Similarity=0.409  Sum_probs=56.1

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      ++.+.++||-||+|+.-                           ..++||+.+.++.|++.|.+++|+||.+...++.-.
T Consensus        20 ~~~DtfifDcDGVlW~g---------------------------~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~   72 (306)
T KOG2882|consen   20 DSFDTFIFDCDGVLWLG---------------------------EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYM   72 (306)
T ss_pred             hhcCEEEEcCCcceeec---------------------------CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHH
Confidence            56889999999998842                           279999999999999999999999999988888888


Q ss_pred             HHHHHCCCCC
Q 028215          188 KNLLFAGYSD  197 (212)
Q Consensus       188 ~nL~~~G~~~  197 (212)
                      +.++++|+..
T Consensus        73 kK~~~lG~~~   82 (306)
T KOG2882|consen   73 KKFAKLGFNS   82 (306)
T ss_pred             HHHHHhCccc
Confidence            8888999884

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=97.70  E-value=0.00013  Score=61.09  Aligned_cols=41  Identities=15%  Similarity=0.112  Sum_probs=33.8

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAG  194 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G  194 (212)
                      ..++.||+.++++.|+++|++++++|+..+...+   ..|+..+
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~---~il~~~~  108 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVY---PLLEGIV  108 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHH---HHHHhhC
Confidence            5789999999999999999999999999875444   4455543

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=97.69  E-value=5.8e-05  Score=63.82  Aligned_cols=56  Identities=14%  Similarity=0.053  Sum_probs=39.3

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHH
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL  191 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~  191 (212)
                      .+++|+||||+++.+..                           +...+.++ ++++|++++++|||+.....   +.+.
T Consensus         1 li~~DlDgTLl~~~~~~---------------------------~~~~~~~~-~~~~gi~~viaTGR~~~~v~---~~~~   49 (236)
T TIGR02471         1 LIITDLDNTLLGDDEGL---------------------------ASFVELLR-GSGDAVGFGIATGRSVESAK---SRYA   49 (236)
T ss_pred             CeEEeccccccCCHHHH---------------------------HHHHHHHH-hcCCCceEEEEeCCCHHHHH---HHHH
Confidence            37899999999753211                           11225666 68999999999999986444   5667


Q ss_pred             HCCCCCC
Q 028215          192 FAGYSDW  198 (212)
Q Consensus       192 ~~G~~~~  198 (212)
                      ..++...
T Consensus        50 ~l~l~~~   56 (236)
T TIGR02471        50 KLNLPSP   56 (236)
T ss_pred             hCCCCCC
Confidence            7777543

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=97.69  E-value=3.1e-05  Score=62.62  Aligned_cols=69  Identities=25%  Similarity=0.402  Sum_probs=44.3

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCC--CHHHHHHHHHhcCCCCC-hhHHHHHHHHHHCCCeEEEEcCCChh------
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIF--NEDAFDEWVDLAKAPAL-PASLTFYKELKQLGFKIFLLTGRNEF------  181 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~--~~~~~~~wv~~~~~~~~-pg~lell~~Lk~~G~kI~~vTgR~~~------  181 (212)
                      |.+.||+||||+.+..        +..|  ++++|         ..+ |++.+.|++|.+.||+|+++||-..-      
T Consensus         1 Kia~fD~DgTLi~~~s--------~~~f~~~~~D~---------~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~   63 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKS--------GKKFPKDPDDW---------KFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGE   63 (159)
T ss_dssp             SEEEE-SCTTTEE-ST--------STTS-SSTCGG---------EEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTC
T ss_pred             CEEEEeCCCCccCCCC--------CCcCcCCHHHh---------hhcchhHHHHHHHHHhcCCeEEEEeCcccccccccc
Confidence            4688999999997632        1112  12333         444 47999999999999999999985321      


Q ss_pred             -----chHHHHHHHHHCCCC
Q 028215          182 -----QRNTTEKNLLFAGYS  196 (212)
Q Consensus       182 -----~~~~T~~nL~~~G~~  196 (212)
                           ........++..|++
T Consensus        64 ~~~~~~~~ki~~il~~l~ip   83 (159)
T PF08645_consen   64 KDLENFHEKIENILKELGIP   83 (159)
T ss_dssp             CHHHHHHHHHHHHHHHCTS-
T ss_pred             chHHHHHHHHHHHHHHcCCc
Confidence                 123345566778888

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=97.67  E-value=0.00014  Score=63.13  Aligned_cols=88  Identities=25%  Similarity=0.369  Sum_probs=62.5

Q ss_pred             CCceEEEecCCCCCCChhh-----HhhhcC------CCCCCC--HHHHHHHH----HhcCC-CCChhHHHHHHHHHHCCC
Q 028215          109 GKDAWVFDIDETLLSNLPY-----YAAHGF------GSEIFN--EDAFDEWV----DLAKA-PALPASLTFYKELKQLGF  170 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~-----~~~~~~------g~~~~~--~~~~~~wv----~~~~~-~~~pg~lell~~Lk~~G~  170 (212)
                      ..--||||||+||+-...+     |....+      +.....  ...+.+|+    ...+. ..=+.+.++++.|+++|+
T Consensus        19 ~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~   98 (252)
T PF11019_consen   19 QDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGI   98 (252)
T ss_pred             CCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCC
Confidence            3457999999999965321     111101      011111  24456776    33343 445788999999999999


Q ss_pred             eEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          171 KIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       171 kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      +++-+|.|+...+..|.+.|++.|+.
T Consensus        99 ~v~alT~~~~~~~~~t~~~Lk~~gi~  124 (252)
T PF11019_consen   99 PVIALTARGPNMEDWTLRELKSLGID  124 (252)
T ss_pred             cEEEEcCCChhhHHHHHHHHHHCCCC
Confidence            99999999999999999999999998

The function is not known.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.66  E-value=0.00016  Score=60.06  Aligned_cols=48  Identities=27%  Similarity=0.338  Sum_probs=38.9

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..++.|++.++|+.++.+ ++++++||-...   .....|++.|+.++...+
T Consensus        97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~---~~~~~l~~~gl~~~Fd~v  144 (229)
T COG1011          97 LLPDYPEALEALKELGKK-YKLGILTNGARP---HQERKLRQLGLLDYFDAV  144 (229)
T ss_pred             hCccChhHHHHHHHHHhh-ccEEEEeCCChH---HHHHHHHHcCChhhhheE
Confidence            368999999999999999 999999996543   345789999988765433

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.66  E-value=0.00019  Score=57.94  Aligned_cols=96  Identities=17%  Similarity=0.205  Sum_probs=55.6

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhh---cCCCCCCCHHH---HHHH---HHhcCCCCChhHHHHHHHHHHCCCeEEEEcC
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAH---GFGSEIFNEDA---FDEW---VDLAKAPALPASLTFYKELKQLGFKIFLLTG  177 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~---~~g~~~~~~~~---~~~w---v~~~~~~~~pg~lell~~Lk~~G~kI~~vTg  177 (212)
                      ..++..+|+|+|+||+.+.......   .+.....+.+.   ...+   .......+.||+.++|+.|++. +++++.|+
T Consensus         3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~   81 (156)
T TIGR02250         3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTM   81 (156)
T ss_pred             cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeC
Confidence            3578999999999999874321000   00000000000   0000   0012246789999999999855 99999999


Q ss_pred             CChhchHHHHHHHHHCCCCC-C--CeEEeecC
Q 028215          178 RNEFQRNTTEKNLLFAGYSD-W--KKLFLRYR  206 (212)
Q Consensus       178 R~~~~~~~T~~nL~~~G~~~-~--~~Lilr~~  206 (212)
                      .++.......+   ..+... +  +.++-|.+
T Consensus        82 ~~~~yA~~vl~---~ldp~~~~F~~ri~~rd~  110 (156)
T TIGR02250        82 GTRAYAQAIAK---LIDPDGKYFGDRIISRDE  110 (156)
T ss_pred             CcHHHHHHHHH---HhCcCCCeeccEEEEecc
Confidence            99876664444   445442 2  34555653

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=97.65  E-value=0.00023  Score=59.91  Aligned_cols=41  Identities=17%  Similarity=0.215  Sum_probs=31.7

Q ss_pred             CCCChhHHHHHH-HHHHCCCeEEEEcCCChhchHHHHHHHHHCCC
Q 028215          152 APALPASLTFYK-ELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGY  195 (212)
Q Consensus       152 ~~~~pg~lell~-~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~  195 (212)
                      ..+.||+.++++ .++++|++++++||+++...+   ...+..|+
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~---~ia~~~~~  134 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVE---AVYFDSNF  134 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHH---HHHHhccc
Confidence            367899999996 788899999999999986433   44445444

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01686 FkbH FkbH-like domain

Probab=97.63  E-value=0.00015  Score=64.66  Aligned_cols=73  Identities=21%  Similarity=0.181  Sum_probs=51.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      .+|++|+|+|+||+...-  ...+-.+.             .-.++.||+.++++.|+++|++++++|++++.   .+.+
T Consensus         2 ~~k~~v~DlDnTlw~gv~--~e~g~~~i-------------~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~---~a~~   63 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVL--GEDGIDNL-------------NLSPLHKTLQEKIKTLKKQGFLLALASKNDED---DAKK   63 (320)
T ss_pred             CeEEEEEcCCCCCCCCEE--ccCCcccc-------------ccCccHHHHHHHHHHHHhCCCEEEEEcCCCHH---HHHH
Confidence            478999999999996410  00000000             01256899999999999999999999999875   3446


Q ss_pred             HHHH----CCCCCCC
Q 028215          189 NLLF----AGYSDWK  199 (212)
Q Consensus       189 nL~~----~G~~~~~  199 (212)
                      .|++    .|+..+.
T Consensus        64 ~l~~~~~~~~~~~~f   78 (320)
T TIGR01686        64 VFERRKDFILQAEDF   78 (320)
T ss_pred             HHHhCccccCcHHHe
Confidence            6777    6666543

The C-terminal portion of this domain is unique to this family (by BLAST).

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=97.60  E-value=0.00031  Score=60.43  Aligned_cols=84  Identities=23%  Similarity=0.354  Sum_probs=59.1

Q ss_pred             eEEEecCCCCCCCh-hhHhhhcCCCCCC--------CHHHHHHHHHh-------------------cCCCCChhHHHHHH
Q 028215          112 AWVFDIDETLLSNL-PYYAAHGFGSEIF--------NEDAFDEWVDL-------------------AKAPALPASLTFYK  163 (212)
Q Consensus       112 avvfDIDgTLldn~-~~~~~~~~g~~~~--------~~~~~~~wv~~-------------------~~~~~~pg~lell~  163 (212)
                      .+|||.|+|+++-. ..+.-..++.+..        ....|.+++..                   ...|+.||+.++++
T Consensus         2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ip~~pgm~~~l~   81 (234)
T PF06888_consen    2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPEDIRDALRSIPIDPGMKELLR   81 (234)
T ss_pred             EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCccHHHHHH
Confidence            48999999999743 3333333443221        11234444431                   46799999999999


Q ss_pred             HH--HHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          164 EL--KQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       164 ~L--k~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      .+  +..|+.++++|....-..+   .+|+++|+...
T Consensus        82 ~l~~~~~~~~~~IiSDaNs~fI~---~iL~~~gl~~~  115 (234)
T PF06888_consen   82 FLAKNQRGFDLIIISDANSFFIE---TILEHHGLRDC  115 (234)
T ss_pred             HHHhcCCCceEEEEeCCcHhHHH---HHHHhCCCccc
Confidence            99  4579999999999886555   79999999864

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=97.59  E-value=0.00014  Score=59.68  Aligned_cols=82  Identities=21%  Similarity=0.144  Sum_probs=44.5

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHH-HHHH--hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFD-EWVD--LAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNT  185 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~-~wv~--~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~  185 (212)
                      -|+.||||+|.||++-.-+..    ...||....-. .-+.  ......+|++.++|+.|+++|++++++|..++.  +.
T Consensus         2 ~PklvvFDLD~TlW~~~~~~~----~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P--~~   75 (169)
T PF12689_consen    2 LPKLVVFDLDYTLWPPWMDTH----VGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEP--DW   75 (169)
T ss_dssp             S-SEEEE-STTTSSSS-TTTS----S-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-H--HH
T ss_pred             CCcEEEEcCcCCCCchhHhhc----cCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCCh--HH
Confidence            378999999999997532211    11222111000 0111  123578999999999999999999999976554  35


Q ss_pred             HHHHHHHCCCC
Q 028215          186 TEKNLLFAGYS  196 (212)
Q Consensus       186 T~~nL~~~G~~  196 (212)
                      ..+-|+.++++
T Consensus        76 A~~~L~~l~i~   86 (169)
T PF12689_consen   76 ARELLKLLEID   86 (169)
T ss_dssp             HHHHHHHTT-C
T ss_pred             HHHHHHhcCCC
Confidence            56788888888

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=97.58  E-value=0.00022  Score=64.85  Aligned_cols=78  Identities=18%  Similarity=0.319  Sum_probs=55.4

Q ss_pred             CCceEEEecCCCCCCChh--hHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCC-------
Q 028215          109 GKDAWVFDIDETLLSNLP--YYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRN-------  179 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~--~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~-------  179 (212)
                      ++++++||.||||.....  |+...                 ....++.||+.++|++|+++|++++++||.+       
T Consensus         1 ~~k~l~lDrDgtl~~~~~~~y~~~~-----------------~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~   63 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPPTDFQVDS-----------------LDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSF   63 (354)
T ss_pred             CCcEEEEeCCCCccCCCCccccccC-----------------cccceECcCHHHHHHHHHhCCCeEEEEECCccccCccc
Confidence            367999999999997532  11110                 1235899999999999999999999999952       


Q ss_pred             -hh----chHHHHHHHHHCCCCCCCeEEee
Q 028215          180 -EF----QRNTTEKNLLFAGYSDWKKLFLR  204 (212)
Q Consensus       180 -~~----~~~~T~~nL~~~G~~~~~~Lilr  204 (212)
                       +.    ....+...+...|+. ++.++..
T Consensus        64 ~~~~l~~~~~~i~~iL~~~gl~-fd~i~i~   92 (354)
T PRK05446         64 PQEDFDPPHNLMMQIFESQGIK-FDEVLIC   92 (354)
T ss_pred             cHHHHhhHHHHHHHHHHHcCCc-eeeEEEe
Confidence             11    123455678888886 5556554

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=97.56  E-value=7.4e-05  Score=59.85  Aligned_cols=41  Identities=15%  Similarity=0.202  Sum_probs=31.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKL  201 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~L  201 (212)
                      ..++.||+.++|+       +++++||.+.....   ..|++.|+..+...
T Consensus        88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~---~~l~~~~l~~~fd~  128 (175)
T TIGR01493        88 NLPPWPDSAAALA-------RVAILSNASHWAFD---QFAQQAGLPWYFDR  128 (175)
T ss_pred             cCCCCCchHHHHH-------HHhhhhCCCHHHHH---HHHHHCCCHHHHhh
Confidence            4678999999998       38899998876443   57888888876443

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PLN03017 trehalose-phosphatase

Probab=97.54  E-value=0.00018  Score=65.65  Aligned_cols=56  Identities=21%  Similarity=0.073  Sum_probs=41.7

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRN  184 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~  184 (212)
                      .+++.++++|+||||+.-..   .                  ...+.+-|++.+.|++|. +|++++++|||+.....
T Consensus       108 ~~k~~llflD~DGTL~Piv~---~------------------p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~  163 (366)
T PLN03017        108 RGKQIVMFLDYDGTLSPIVD---D------------------PDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVY  163 (366)
T ss_pred             cCCCeEEEEecCCcCcCCcC---C------------------cccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHH
Confidence            44567888999999993100   0                  012357799999999999 88999999999976443

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=97.51  E-value=0.00043  Score=58.06  Aligned_cols=86  Identities=19%  Similarity=0.265  Sum_probs=59.5

Q ss_pred             CCceEEEecCCCCCCChhhHhhh---c------------CCC-CCCC-------------HHHHHHHHHhcCCCCChhHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAH---G------------FGS-EIFN-------------EDAFDEWVDLAKAPALPASL  159 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~---~------------~g~-~~~~-------------~~~~~~wv~~~~~~~~pg~l  159 (212)
                      ..++|+||+|-|++.-...-.-.   +            .++ .+|.             ..+..+++.+.+....||+.
T Consensus        15 ~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~~k~~lT~Gi~   94 (227)
T KOG1615|consen   15 SADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIKQKPTLTPGIR   94 (227)
T ss_pred             hcCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhcCCCccCCCHH
Confidence            46799999999999754321110   1            111 1231             24455666667888999999


Q ss_pred             HHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCC
Q 028215          160 TFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSD  197 (212)
Q Consensus       160 ell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~  197 (212)
                      +|...|+++|.+++++||--+...+...   ..+|++.
T Consensus        95 eLv~~L~~~~~~v~liSGGF~~~i~~Va---~~Lgi~~  129 (227)
T KOG1615|consen   95 ELVSRLHARGTQVYLISGGFRQLIEPVA---EQLGIPK  129 (227)
T ss_pred             HHHHHHHHcCCeEEEEcCChHHHHHHHH---HHhCCcH
Confidence            9999999999999999998766555433   3458874

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=97.47  E-value=0.00041  Score=56.72  Aligned_cols=62  Identities=23%  Similarity=0.362  Sum_probs=49.6

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTT  186 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T  186 (212)
                      ..|.+++++|+|.||+.-                         ....+-|.+.+.+..++++|++++++||..+.-..  
T Consensus        25 ~~Gikgvi~DlDNTLv~w-------------------------d~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~--   77 (175)
T COG2179          25 AHGIKGVILDLDNTLVPW-------------------------DNPDATPELRAWLAELKEAGIKVVVVSNNKESRVA--   77 (175)
T ss_pred             HcCCcEEEEeccCceecc-------------------------cCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHH--
Confidence            357999999999999952                         11256788999999999999999999998775333  


Q ss_pred             HHHHHHCCCC
Q 028215          187 EKNLLFAGYS  196 (212)
Q Consensus       187 ~~nL~~~G~~  196 (212)
                       .+.+++|++
T Consensus        78 -~~~~~l~v~   86 (175)
T COG2179          78 -RAAEKLGVP   86 (175)
T ss_pred             -hhhhhcCCc
Confidence             577777877

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=97.42  E-value=0.00014  Score=57.75  Aligned_cols=86  Identities=16%  Similarity=0.163  Sum_probs=49.6

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHH
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL  190 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL  190 (212)
                      +.+|||+||||+++...-..      +.+...- .-.........||+.+||+.+.+ .+.+++.|+..+.......+.|
T Consensus         1 k~LVlDLD~TLv~~~~~~~~------~~~~~~~-~~~~~~~v~~RP~l~~FL~~l~~-~~ev~i~T~~~~~ya~~v~~~l   72 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPL------PYDFKII-DQRGGYYVKLRPGLDEFLEELSK-HYEVVIWTSASEEYAEPVLDAL   72 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCT------T-SEEEE-TEEEEEEEEE-TTHHHHHHHHHH-HCEEEEE-SS-HHHHHHHHHHH
T ss_pred             CEEEEeCCCcEEEEeecCCC------Cccccee-ccccceeEeeCchHHHHHHHHHH-hceEEEEEeehhhhhhHHHHhh
Confidence            57999999999986431100      0000000 00000113578999999999954 4999999999988877777777


Q ss_pred             HHCCCCCCCeEEeec
Q 028215          191 LFAGYSDWKKLFLRY  205 (212)
Q Consensus       191 ~~~G~~~~~~Lilr~  205 (212)
                      ...+-. +.+.+.|.
T Consensus        73 dp~~~~-~~~~~~r~   86 (159)
T PF03031_consen   73 DPNGKL-FSRRLYRD   86 (159)
T ss_dssp             TTTTSS-EEEEEEGG
T ss_pred             hhhccc-cccccccc
Confidence            653322 34555554

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=97.40  E-value=0.00039  Score=56.18  Aligned_cols=78  Identities=18%  Similarity=0.155  Sum_probs=47.3

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCC-HHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFN-EDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~-~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ++.+|+|+||||+.+..--...   ...|. .-..+.-...-.....||+.+||+.|.+. ++|++.|+.++...+...+
T Consensus         1 k~~lvlDLDeTLi~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~   76 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKMPKV---DADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLD   76 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCCCCC---CCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHH
Confidence            4689999999999773211000   00000 00000000001235789999999999988 9999999999876665444


Q ss_pred             HHH
Q 028215          189 NLL  191 (212)
Q Consensus       189 nL~  191 (212)
                      .|.
T Consensus        77 ~ld   79 (162)
T TIGR02251        77 ILD   79 (162)
T ss_pred             HHC
Confidence            443

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=97.38  E-value=0.00044  Score=66.63  Aligned_cols=71  Identities=21%  Similarity=0.241  Sum_probs=51.5

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      -+.||-|||||+.-+.-. .+ .+.   +          -++.=...|+.+|+...+++||++.|+|+|.-.+...|...
T Consensus       530 ~kIVISDIDGTITKSDvL-Gh-~lp---~----------iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~y  594 (738)
T KOG2116|consen  530 DKIVISDIDGTITKSDVL-GH-VLP---M----------IGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQY  594 (738)
T ss_pred             CcEEEecCCCceEhhhhh-hh-hhh---h----------hcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHH
Confidence            457889999999966321 11 000   0          11222457999999999999999999999999998888877


Q ss_pred             HHHCCC
Q 028215          190 LLFAGY  195 (212)
Q Consensus       190 L~~~G~  195 (212)
                      |+...=
T Consensus       595 L~nv~Q  600 (738)
T KOG2116|consen  595 LKNVEQ  600 (738)
T ss_pred             HHHHhh
Confidence            766543

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=97.36  E-value=0.00026  Score=57.34  Aligned_cols=71  Identities=25%  Similarity=0.321  Sum_probs=50.8

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      ...+-+|||+||||.|-.-||..++-....|+              ...|.  -++.|.+.|++++++|||...   ..+
T Consensus         6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFn--------------v~DG~--Gik~l~~~Gi~vAIITGr~s~---ive   66 (170)
T COG1778           6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFN--------------VRDGH--GIKLLLKSGIKVAIITGRDSP---IVE   66 (170)
T ss_pred             hhceEEEEeccceeecCeEEEcCCCceeeeee--------------ccCcH--HHHHHHHcCCeEEEEeCCCCH---HHH
Confidence            35788999999999998777665432222332              22332  367888999999999999876   344


Q ss_pred             HHHHHCCCCC
Q 028215          188 KNLLFAGYSD  197 (212)
Q Consensus       188 ~nL~~~G~~~  197 (212)
                      +..+..|+..
T Consensus        67 ~Ra~~LGI~~   76 (170)
T COG1778          67 KRAKDLGIKH   76 (170)
T ss_pred             HHHHHcCCce
Confidence            6778888873

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=97.36  E-value=0.00023  Score=57.36  Aligned_cols=40  Identities=25%  Similarity=0.374  Sum_probs=32.2

Q ss_pred             hhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          156 PASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       156 pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      |++.++++.++++|++++++|+.++.   .+...++..|++..
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~---~i~~~~~~~~i~~~  131 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDE---IIEPIAERLGIDDD  131 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHH---HHHHHHHHTTSSEG
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHH---HHHHHHHHcCCCce
Confidence            44449999999999999999999875   34456778899863

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=97.33  E-value=0.00021  Score=71.74  Aligned_cols=71  Identities=18%  Similarity=0.251  Sum_probs=49.9

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHH-HHCCCeEEEEcCCChhchHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKEL-KQLGFKIFLLTGRNEFQRNTT  186 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~L-k~~G~kI~~vTgR~~~~~~~T  186 (212)
                      .+++++++|+||||+...+.                       ...+-|++.++|+.| ++.|..++++|||+....+  
T Consensus       594 ~~~rlI~LDyDGTLlp~~~~-----------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~--  648 (854)
T PLN02205        594 TTTRAILLDYDGTLMPQASI-----------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLA--  648 (854)
T ss_pred             hcCeEEEEecCCcccCCccc-----------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHH--
Confidence            35789999999999965211                       125668999999998 7789999999999886444  


Q ss_pred             HHHHHH---CCCCCCCeEEee
Q 028215          187 EKNLLF---AGYSDWKKLFLR  204 (212)
Q Consensus       187 ~~nL~~---~G~~~~~~Lilr  204 (212)
                       +++..   .++-.-...++|
T Consensus       649 -~~f~~~~~l~laaEHG~~ir  668 (854)
T PLN02205        649 -DWFSPCEKLGIAAEHGYFLR  668 (854)
T ss_pred             -HHhCCCCCeEEEEeCCEEEE
Confidence             55533   233333344555

>COG4996 Predicted phosphatase [General function prediction only]

Probab=97.30  E-value=0.00042  Score=54.81  Aligned_cols=92  Identities=18%  Similarity=0.114  Sum_probs=63.0

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHH--hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVD--LAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~--~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      .+|+||.|||++|.-..-.-    ..||..-+-+.-..  ..+..+.|.+.++++.++..|+-+..+|=..+.   ...+
T Consensus         1 ~~i~~d~d~t~wdhh~iSsl----~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~---kA~~   73 (164)
T COG4996           1 RAIVFDADKTLWDHHNISSL----EPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFED---KAIK   73 (164)
T ss_pred             CcEEEeCCCcccccccchhc----CCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchH---HHHH
Confidence            37999999999985321110    12332111111111  124578999999999999999999999887764   5668


Q ss_pred             HHHHCCCCCCCeEEeecCCCc
Q 028215          189 NLLFAGYSDWKKLFLRYRNRY  209 (212)
Q Consensus       189 nL~~~G~~~~~~Lilr~~~~~  209 (212)
                      .|+.+|+..|++.+.-.|-.|
T Consensus        74 aLral~~~~yFhy~ViePhP~   94 (164)
T COG4996          74 ALRALDLLQYFHYIVIEPHPY   94 (164)
T ss_pred             HHHHhchhhhEEEEEecCCCh
Confidence            899999999988777655544

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=97.30  E-value=0.00061  Score=60.99  Aligned_cols=86  Identities=19%  Similarity=0.172  Sum_probs=66.8

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhc-CCCCChhHHHHHHHHHHCC-CeEEEEcCCChhchHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLA-KAPALPASLTFYKELKQLG-FKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~-~~~~~pg~lell~~Lk~~G-~kI~~vTgR~~~~~~~T~  187 (212)
                      .-.+|-|||+|+..+---     -    -....|+.|.... .-+++||+..+|+.|.+.| ..|+|+|+++.....-..
T Consensus       161 ~igiISDiDDTV~~T~V~-----~----~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~  231 (373)
T COG4850         161 GIGIISDIDDTVKVTGVT-----E----GPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQ  231 (373)
T ss_pred             ceeeeeccccceEecccc-----c----chHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHH
Confidence            447899999999976210     0    0124577777764 4689999999999999999 999999999998877777


Q ss_pred             HHHHHCCCCCCCeEEeec
Q 028215          188 KNLLFAGYSDWKKLFLRY  205 (212)
Q Consensus       188 ~nL~~~G~~~~~~Lilr~  205 (212)
                      +.+.+.+|| +.-++||.
T Consensus       232 efi~~~~~P-~GPl~L~~  248 (373)
T COG4850         232 EFITNRNFP-YGPLLLRR  248 (373)
T ss_pred             HHHhcCCCC-CCchhHhh
Confidence            788888899 56677763

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=97.22  E-value=0.00045  Score=60.51  Aligned_cols=75  Identities=17%  Similarity=0.097  Sum_probs=53.4

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHC-CCeEEEEcCCChhchHH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQL-GFKIFLLTGRNEFQRNT  185 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~-G~kI~~vTgR~~~~~~~  185 (212)
                      ..++.+++||.||||.+-.++                     ...+++.++++++|+.|.++ ...++++|||+....+ 
T Consensus        15 ~a~~~~~~lDyDGTl~~i~~~---------------------p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~-   72 (266)
T COG1877          15 NARKRLLFLDYDGTLTEIVPH---------------------PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELE-   72 (266)
T ss_pred             cccceEEEEeccccccccccC---------------------ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHH-
Confidence            347889999999999975331                     12358999999999999999 4579999999986444 


Q ss_pred             HHHHHH--HCCCCCCCeEEeec
Q 028215          186 TEKNLL--FAGYSDWKKLFLRY  205 (212)
Q Consensus       186 T~~nL~--~~G~~~~~~Lilr~  205 (212)
                        .++.  ..|+-+......|.
T Consensus        73 --~~~~v~~i~l~aehGa~~r~   92 (266)
T COG1877          73 --RLFGVPGIGLIAEHGAEVRD   92 (266)
T ss_pred             --HhcCCCCccEEEecceEEec
Confidence              3443  23334445566653

>PLN02811 hydrolase

Probab=97.18  E-value=0.0012  Score=55.20  Aligned_cols=50  Identities=14%  Similarity=0.149  Sum_probs=35.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..+++||+.++|+.|+++|++++++||......  +...++..|+..|.+.+
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~--~~~~~~~~~l~~~f~~i  125 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHF--DLKTQRHGELFSLMHHV  125 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhH--HHHHcccHHHHhhCCEE
Confidence            567899999999999999999999999876432  22233334555554333

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.16  E-value=0.0023  Score=56.44  Aligned_cols=72  Identities=21%  Similarity=0.217  Sum_probs=56.5

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      ..+..||||+|+||+....                       ..-.+.|.+.+-+..|+++|.-+++=|.-.+.+..   
T Consensus       120 ~~phVIVfDlD~TLItd~~-----------------------~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~---  173 (297)
T PF05152_consen  120 EPPHVIVFDLDSTLITDEG-----------------------DVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVR---  173 (297)
T ss_pred             CCCcEEEEECCCcccccCC-----------------------ccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHH---
Confidence            3567999999999996421                       01145688899999999999999999988776544   


Q ss_pred             HHHHHCCCCCCCeEEeec
Q 028215          188 KNLLFAGYSDWKKLFLRY  205 (212)
Q Consensus       188 ~nL~~~G~~~~~~Lilr~  205 (212)
                      +.|++.|+++++.+++-+
T Consensus       174 ~sl~~~~L~~~Fd~ii~~  191 (297)
T PF05152_consen  174 HSLKELKLEGYFDIIICG  191 (297)
T ss_pred             HHHHHhCCccccEEEEeC
Confidence            788888999988877754

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=97.15  E-value=0.00057  Score=67.36  Aligned_cols=63  Identities=14%  Similarity=0.096  Sum_probs=46.1

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHC-CCeEEEEcCCChhchHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQL-GFKIFLLTGRNEFQRNTT  186 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~-G~kI~~vTgR~~~~~~~T  186 (212)
                      .+++.++||+||||++....                     .....+-+.+.+.|+.|.++ |+.|+++|||+....+  
T Consensus       490 ~~~rLi~~D~DGTL~~~~~~---------------------~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~--  546 (726)
T PRK14501        490 ASRRLLLLDYDGTLVPFAPD---------------------PELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLE--  546 (726)
T ss_pred             ccceEEEEecCccccCCCCC---------------------cccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHH--
Confidence            35789999999999975210                     01235678999999999995 9999999999975433  


Q ss_pred             HHHHHHCC
Q 028215          187 EKNLLFAG  194 (212)
Q Consensus       187 ~~nL~~~G  194 (212)
                       +++...+
T Consensus       547 -~~~~~~~  553 (726)
T PRK14501        547 -RWFGDLP  553 (726)
T ss_pred             -HHhCCCC
Confidence             4444333

>PLN02151 trehalose-phosphatase

Probab=97.13  E-value=0.001  Score=60.55  Aligned_cols=56  Identities=18%  Similarity=0.125  Sum_probs=42.1

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRN  184 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~  184 (212)
                      ..++.++++|+||||+.-.+                     ....+.+-|++++.|+.|. ++.+++++|||+.....
T Consensus        95 ~~~~~ll~lDyDGTL~PIv~---------------------~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~  150 (354)
T PLN02151         95 EGKQIVMFLDYDGTLSPIVD---------------------DPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVS  150 (354)
T ss_pred             cCCceEEEEecCccCCCCCC---------------------CcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHH
Confidence            34677899999999994211                     0123468899999999999 55799999999976433

>TIGR00685 T6PP trehalose-phosphatase

Probab=97.13  E-value=0.00067  Score=58.02  Aligned_cols=51  Identities=29%  Similarity=0.383  Sum_probs=39.2

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHC-CCeEEEEcCCCh
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQL-GFKIFLLTGRNE  180 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~-G~kI~~vTgR~~  180 (212)
                      ++.+++||+||||....+         .            ...+.+-|++.+.|+.|.++ +..|+++|||+.
T Consensus         2 ~~~~l~lD~DGTL~~~~~---------~------------p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~   53 (244)
T TIGR00685         2 RKRAFFFDYDGTLSEIVP---------D------------PDAAVVSDRLLTILQKLAARPHNAIWIISGRKF   53 (244)
T ss_pred             CcEEEEEecCccccCCcC---------C------------CcccCCCHHHHHHHHHHHhCCCCeEEEEECCCh
Confidence            467899999999996411         0            01246789999999999887 577899999975

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.04  E-value=0.0027  Score=54.05  Aligned_cols=32  Identities=13%  Similarity=0.161  Sum_probs=28.9

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhc
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQ  182 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~  182 (212)
                      +.++.||+.++|++|+++|++++++||.+...
T Consensus        93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~  124 (220)
T TIGR01691        93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPA  124 (220)
T ss_pred             ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence            45799999999999999999999999998653

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=97.02  E-value=0.0018  Score=55.03  Aligned_cols=63  Identities=17%  Similarity=0.275  Sum_probs=55.5

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      .+.+++++||-|||...                           ..++||+.|.++.|+..+.+|=|+||.+...+....
T Consensus         5 ~~v~gvLlDlSGtLh~e---------------------------~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~   57 (262)
T KOG3040|consen    5 RAVKGVLLDLSGTLHIE---------------------------DAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLH   57 (262)
T ss_pred             cccceEEEeccceEecc---------------------------cccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHH
Confidence            35789999999999864                           248999999999999999999999999988777788


Q ss_pred             HHHHHCCCCC
Q 028215          188 KNLLFAGYSD  197 (212)
Q Consensus       188 ~nL~~~G~~~  197 (212)
                      +.|.+.||.-
T Consensus        58 ~rL~rlgf~v   67 (262)
T KOG3040|consen   58 ERLQRLGFDV   67 (262)
T ss_pred             HHHHHhCCCc
Confidence            8999999974

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=97.02  E-value=0.0032  Score=53.88  Aligned_cols=87  Identities=21%  Similarity=0.388  Sum_probs=62.1

Q ss_pred             CCCceEEEecCCCCCCC-hhhHhhhcCCCC--------CCCHHHHHHHHHh-------------------cCCCCChhHH
Q 028215          108 DGKDAWVFDIDETLLSN-LPYYAAHGFGSE--------IFNEDAFDEWVDL-------------------AKAPALPASL  159 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn-~~~~~~~~~g~~--------~~~~~~~~~wv~~-------------------~~~~~~pg~l  159 (212)
                      ..+-.++||.|.|++|- +..|.....+..        .|....|++++.+                   ...|..||+.
T Consensus        11 ~~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv   90 (256)
T KOG3120|consen   11 SPRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMV   90 (256)
T ss_pred             CCcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHH
Confidence            35668999999999974 333332222211        1222347777752                   4679999999


Q ss_pred             HHHHHHHHCCC-eEEEEcCCChhchHHHHHHHHHCCCCC
Q 028215          160 TFYKELKQLGF-KIFLLTGRNEFQRNTTEKNLLFAGYSD  197 (212)
Q Consensus       160 ell~~Lk~~G~-kI~~vTgR~~~~~~~T~~nL~~~G~~~  197 (212)
                      ++++.+++.|. .++++|....-..+   ++|+++|+.+
T Consensus        91 ~lik~~ak~g~~eliIVSDaNsfFIe---~~Lea~~~~d  126 (256)
T KOG3120|consen   91 RLIKSAAKLGCFELIIVSDANSFFIE---EILEAAGIHD  126 (256)
T ss_pred             HHHHHHHhCCCceEEEEecCchhHHH---HHHHHccHHH
Confidence            99999999995 99999998776544   7999999864

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=97.01  E-value=0.0013  Score=61.15  Aligned_cols=76  Identities=25%  Similarity=0.220  Sum_probs=53.3

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      ...+.||+|||||+.-+... .. .+             -..++.=-.-|+.+++.....+||+|.++|+|+-.+...|.
T Consensus       373 ~n~kiVVsDiDGTITkSD~~-Gh-v~-------------~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTr  437 (580)
T COG5083         373 NNKKIVVSDIDGTITKSDAL-GH-VK-------------QMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTR  437 (580)
T ss_pred             CCCcEEEEecCCcEEehhhH-HH-HH-------------HHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhh
Confidence            35778999999999966322 11 00             01122223568889999999999999999999998888887


Q ss_pred             HHHH---HCCCCCC
Q 028215          188 KNLL---FAGYSDW  198 (212)
Q Consensus       188 ~nL~---~~G~~~~  198 (212)
                      ..|+   +.|+.-+
T Consensus       438 sylrnieQngykLp  451 (580)
T COG5083         438 SYLRNIEQNGYKLP  451 (580)
T ss_pred             hHHHhhhhcCccCC
Confidence            7664   4566544

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=96.89  E-value=0.0015  Score=54.15  Aligned_cols=76  Identities=20%  Similarity=0.333  Sum_probs=52.1

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh--------
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF--------  181 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~--------  181 (212)
                      .+++++|-||||..-.+-|.        .+   +++|      ...||+.+.+..|++.|++++++||-+.-        
T Consensus         5 ~k~lflDRDGtin~d~~~yv--------~~---~~~~------~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~   67 (181)
T COG0241           5 QKALFLDRDGTINIDKGDYV--------DS---LDDF------QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEA   67 (181)
T ss_pred             CcEEEEcCCCceecCCCccc--------Cc---HHHh------ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHH
Confidence            68999999999986533110        11   2222      78999999999999999999999995421        


Q ss_pred             c----hHHHHHHHHHCCCCCCCeEEe
Q 028215          182 Q----RNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       182 ~----~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      .    -+.....|+..|.. .+.++.
T Consensus        68 ~f~~~~~~m~~~l~~~gv~-id~i~~   92 (181)
T COG0241          68 DFDKLHNKMLKILASQGVK-IDGILY   92 (181)
T ss_pred             HHHHHHHHHHHHHHHcCCc-cceEEE
Confidence            1    12234566777864 444443

>PLN02382 probable sucrose-phosphatase

Probab=96.78  E-value=0.0046  Score=57.30  Aligned_cols=66  Identities=12%  Similarity=0.009  Sum_probs=42.7

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      ..+..|+.||||||+++..   .                    +....+....+++++.++|+.++++|||+.....   
T Consensus         7 ~~~~lI~sDLDGTLL~~~~---~--------------------~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~---   60 (413)
T PLN02382          7 SPRLMIVSDLDHTMVDHHD---P--------------------ENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYK---   60 (413)
T ss_pred             CCCEEEEEcCCCcCcCCCC---c--------------------cchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHH---
Confidence            3456888899999997510   0                    0011123345557889999999999999975433   


Q ss_pred             HHHHHCCCCCCC
Q 028215          188 KNLLFAGYSDWK  199 (212)
Q Consensus       188 ~nL~~~G~~~~~  199 (212)
                      +-++..++...+
T Consensus        61 ~l~~~~~l~~p~   72 (413)
T PLN02382         61 ELRKEKPLLTPD   72 (413)
T ss_pred             HHHHhCCCCCCC
Confidence            445556665443

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=96.74  E-value=0.0022  Score=52.60  Aligned_cols=91  Identities=18%  Similarity=0.253  Sum_probs=62.4

Q ss_pred             eEEEecCCCCCCChhhHhh---hcCC-------CCCC--------CHHHHHHHHHhcC------CCCChhHHHHHHHHHH
Q 028215          112 AWVFDIDETLLSNLPYYAA---HGFG-------SEIF--------NEDAFDEWVDLAK------APALPASLTFYKELKQ  167 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~---~~~g-------~~~~--------~~~~~~~wv~~~~------~~~~pg~lell~~Lk~  167 (212)
                      -+.+|||||+.+-. ++..   ..|.       ...|        ..+.+.+|....+      +..-.++...+..+++
T Consensus         8 ~~ciDIDGtit~~~-t~~~~~n~~f~kslse~d~t~y~lhkil~i~~ee~~k~~e~~ea~l~ke~l~~q~v~~~L~~~~e   86 (194)
T COG5663           8 RCCIDIDGTITDDP-TFAPYLNPAFEKSLSEADPTDYDLHKILNITTEEFWKWMEQTEAWLYKEALLAQLVKQVLPSLKE   86 (194)
T ss_pred             heeeccCCceecCc-ccchhccHHHHhhhhhcccccccHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence            46799999998742 2221   0011       0112        2466778877532      3445566677777776


Q ss_pred             CCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEeec
Q 028215          168 LGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFLRY  205 (212)
Q Consensus       168 ~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lilr~  205 (212)
                      + .+++++|+|.......|-.||....++ |++|.+-+
T Consensus        87 ~-~~L~~itar~~dl~~iT~~~l~~q~ih-~~~l~i~g  122 (194)
T COG5663          87 E-HRLIYITARKADLTRITYAWLFIQNIH-YDHLEIVG  122 (194)
T ss_pred             h-ceeeeeehhhHHHHHHHHHHHHHhccc-hhhhhhhc
Confidence            6 799999999999889999999999999 77776543

>PTZ00445 p36-lilke protein; Provisional

Probab=96.71  E-value=0.0024  Score=54.21  Aligned_cols=91  Identities=18%  Similarity=0.104  Sum_probs=59.5

Q ss_pred             hHHHHhhccCccccccHHHHHHHHHHHHhhccccCCCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHH---H
Q 028215           72 VEFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWV---D  148 (212)
Q Consensus        72 ~~~v~~y~~~~~Y~~D~~~v~~~A~~y~~~~~~~~~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv---~  148 (212)
                      .+.++.|..++++.  ...--+.|..+.+.++.   .|.++|++|+|-||+.-      | -||       |.+..   .
T Consensus        10 ~~~~~~~~~~~~~~--~~~~~~~~~~~v~~L~~---~GIk~Va~D~DnTlI~~------H-sgG-------~~~~~~~~~   70 (219)
T PTZ00445         10 HDAFKEYIESGLFD--HLNPHESADKFVDLLNE---CGIKVIASDFDLTMITK------H-SGG-------YIDPDNDDI   70 (219)
T ss_pred             HHHHHHHHHhcccc--cCCHHHHHHHHHHHHHH---cCCeEEEecchhhhhhh------h-ccc-------ccCCCcchh
Confidence            34566777776664  23333455555555544   47999999999999962      1 111       11110   0


Q ss_pred             hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          149 LAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       149 ~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      .--..+.|...++++.|++.|++|++||=+++.
T Consensus        71 ~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~  103 (219)
T PTZ00445         71 RVLTSVTPDFKILGKRLKNSNIKISVVTFSDKE  103 (219)
T ss_pred             hhhccCCHHHHHHHHHHHHCCCeEEEEEccchh
Confidence            001246788999999999999999999988764

>PLN02580 trehalose-phosphatase

Probab=96.65  E-value=0.0039  Score=57.39  Aligned_cols=56  Identities=21%  Similarity=0.191  Sum_probs=42.5

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRN  184 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~  184 (212)
                      ..++.+++||.||||..-.+            +         -..+.+-|++.+.|+.|.+. .+++++|||+.....
T Consensus       116 ~~k~~~LfLDyDGTLaPIv~------------~---------Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~  171 (384)
T PLN02580        116 KGKKIALFLDYDGTLSPIVD------------D---------PDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVY  171 (384)
T ss_pred             hcCCeEEEEecCCccCCCCC------------C---------cccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHH
Confidence            34577899999999985311            0         12357789999999999988 589999999976443

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=96.54  E-value=0.0071  Score=50.72  Aligned_cols=66  Identities=20%  Similarity=0.223  Sum_probs=47.8

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTT  186 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T  186 (212)
                      ..+++.+|+|+||||++...-  ..                 ....-..|++.+||+.+.+ .+.|++-|+......+. 
T Consensus        18 ~~~kklLVLDLDeTLvh~~~~--~~-----------------~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~-   76 (195)
T TIGR02245        18 REGKKLLVLDIDYTLFDHRSP--AE-----------------TGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEI-   76 (195)
T ss_pred             CCCCcEEEEeCCCceEccccc--CC-----------------CceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHH-
Confidence            467899999999999974110  00                 1113568999999999988 69999999998765553 


Q ss_pred             HHHHHHCCC
Q 028215          187 EKNLLFAGY  195 (212)
Q Consensus       187 ~~nL~~~G~  195 (212)
                        .+...|+
T Consensus        77 --~l~~l~~   83 (195)
T TIGR02245        77 --KMTELGV   83 (195)
T ss_pred             --HHHHhcc
Confidence              4444444

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.51  E-value=0.0031  Score=54.00  Aligned_cols=58  Identities=21%  Similarity=0.216  Sum_probs=40.7

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      -+..|+.|+||||+..       +     |++               ..+...+.+|++.|++|+++|+++........+
T Consensus         6 ~~~lIFtDlD~TLl~~-------~-----ye~---------------~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~   58 (274)
T COG3769           6 MPLLIFTDLDGTLLPH-------S-----YEW---------------QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQK   58 (274)
T ss_pred             cceEEEEcccCcccCC-------C-----CCC---------------CccchHHHHHHHcCCeEEEeccchHHHHHHHHH
Confidence            3668899999999972       1     110               123567889999999999999999865553333


Q ss_pred             HHHHCCCC
Q 028215          189 NLLFAGYS  196 (212)
Q Consensus       189 nL~~~G~~  196 (212)
                         ..|++
T Consensus        59 ---~l~v~   63 (274)
T COG3769          59 ---SLGVQ   63 (274)
T ss_pred             ---hcCCC
Confidence               34555

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=96.40  E-value=0.011  Score=48.50  Aligned_cols=48  Identities=23%  Similarity=0.344  Sum_probs=38.3

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCC--eEEEEcCCC
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGF--KIFLLTGRN  179 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~--kI~~vTgR~  179 (212)
                      ..|.+++|||.|.||..-.                         +..+-|...+.++++++.+.  +|.++||+.
T Consensus        38 ~~Gik~li~DkDNTL~~~~-------------------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsa   87 (168)
T PF09419_consen   38 KKGIKALIFDKDNTLTPPY-------------------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSA   87 (168)
T ss_pred             hcCceEEEEcCCCCCCCCC-------------------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence            4689999999999998531                         12566788888999998876  499999984

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=96.17  E-value=0.0029  Score=53.68  Aligned_cols=48  Identities=19%  Similarity=0.156  Sum_probs=28.9

Q ss_pred             EEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCC-CeEEEEcCCChhc
Q 028215          114 VFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLG-FKIFLLTGRNEFQ  182 (212)
Q Consensus       114 vfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G-~kI~~vTgR~~~~  182 (212)
                      +||.||||..-.+.                     ...+.+.|++.++|+.|.+.. ..|+++|||+...
T Consensus         1 ~lDyDGTL~p~~~~---------------------p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~   49 (235)
T PF02358_consen    1 FLDYDGTLAPIVDD---------------------PDAAVPPPELRELLRALAADPNNTVAIVSGRSLDD   49 (235)
T ss_dssp             EEE-TTTSS---S----------------------GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHH
T ss_pred             CcccCCccCCCCCC---------------------ccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHH
Confidence            58999999964210                     123578999999999999884 4799999999754

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=96.12  E-value=0.0068  Score=52.18  Aligned_cols=65  Identities=15%  Similarity=0.060  Sum_probs=38.9

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      +..++.|+|||+++..+                          .......++++.....++.++++|||+-....   +-
T Consensus         2 ~~ll~sDlD~Tl~~~~~--------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~---~~   52 (247)
T PF05116_consen    2 PRLLASDLDGTLIDGDD--------------------------EALARLEELLEQQARPEILFVYVTGRSLESVL---RL   52 (247)
T ss_dssp             SEEEEEETBTTTBHCHH--------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHH---HH
T ss_pred             CEEEEEECCCCCcCCCH--------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHHHH---HH
Confidence            46789999999992211                          11222334444445778999999999976443   67


Q ss_pred             HHHCCCCCCCeEEe
Q 028215          190 LLFAGYSDWKKLFL  203 (212)
Q Consensus       190 L~~~G~~~~~~Lil  203 (212)
                      +++.+++.-+-+|.
T Consensus        53 ~~~~~l~~Pd~~I~   66 (247)
T PF05116_consen   53 LREYNLPQPDYIIT   66 (247)
T ss_dssp             HHHCT-EE-SEEEE
T ss_pred             HHhCCCCCCCEEEe
Confidence            77778775444443

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=95.80  E-value=0.03  Score=49.43  Aligned_cols=54  Identities=19%  Similarity=0.192  Sum_probs=42.3

Q ss_pred             HHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          140 EDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       140 ~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      .+...+.+.+...++.||+.+|++.|+++|++++++||.....   ...-|+++|+.
T Consensus       108 ~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~---Ie~vL~~lgl~  161 (277)
T TIGR01544       108 KAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNV---LEEVLRQAGVY  161 (277)
T ss_pred             HHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHH---HHHHHHHcCCC
Confidence            3344444444678999999999999999999999999998753   44677778874

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=95.65  E-value=0.013  Score=59.44  Aligned_cols=83  Identities=13%  Similarity=0.094  Sum_probs=52.6

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHC-CCeEEEEcCCChhchHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQL-GFKIFLLTGRNEFQRNTT  186 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~-G~kI~~vTgR~~~~~~~T  186 (212)
                      .++.+++||.||||..-.+.-..            .-.-+.+..+.+.|+++++|+.|.+. +..|+++|||+....+  
T Consensus       589 a~~RLlfLDyDGTLap~~~~P~~------------~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le--  654 (934)
T PLN03064        589 SNNRLLILGFNATLTEPVDTPGR------------RGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLD--  654 (934)
T ss_pred             ccceEEEEecCceeccCCCCccc------------ccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHH--
Confidence            35679999999999964221000            00001112356779999999999976 7899999999986544  


Q ss_pred             HHHHHHCC--CCCCCeEEeec
Q 028215          187 EKNLLFAG--YSDWKKLFLRY  205 (212)
Q Consensus       187 ~~nL~~~G--~~~~~~Lilr~  205 (212)
                       +++...+  +-+-...++|.
T Consensus       655 -~~fg~~~L~LaAEHG~~~R~  674 (934)
T PLN03064        655 -ENFGEFDMWLAAENGMFLRH  674 (934)
T ss_pred             -HHhCCCCceEEeeCCeEEec
Confidence             5664433  33223455553

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=95.40  E-value=0.028  Score=56.24  Aligned_cols=75  Identities=15%  Similarity=0.040  Sum_probs=50.2

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHC-CCeEEEEcCCChhchHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQL-GFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~-G~kI~~vTgR~~~~~~~T~  187 (212)
                      ++.+++||.||||..-.+.         +-         ....+.+.|++.++|+.|.+. +..|+++|||+....+   
T Consensus       506 ~~rll~LDyDGTL~~~~~~---------~~---------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~---  564 (797)
T PLN03063        506 NNRLLILGFYGTLTEPRNS---------QI---------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILD---  564 (797)
T ss_pred             cCeEEEEecCccccCCCCC---------cc---------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHH---
Confidence            5679999999999942110         00         012246789999999999876 7899999999886444   


Q ss_pred             HHHHHCC--CCCCCeEEee
Q 028215          188 KNLLFAG--YSDWKKLFLR  204 (212)
Q Consensus       188 ~nL~~~G--~~~~~~Lilr  204 (212)
                      +++...+  +-+-....+|
T Consensus       565 ~~~~~~~l~l~aeHG~~~r  583 (797)
T PLN03063        565 KNFGEYNIWLAAENGMFLR  583 (797)
T ss_pred             HHhCCCCCcEEEeCCEEEe
Confidence            5664433  3322345555

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=95.20  E-value=0.07  Score=45.71  Aligned_cols=92  Identities=21%  Similarity=0.282  Sum_probs=62.8

Q ss_pred             CCCCceEEEecCCCCCCChhhHhh-----------hcCC---------------------------CCCCCHHHHHHHHH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAA-----------HGFG---------------------------SEIFNEDAFDEWVD  148 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~-----------~~~g---------------------------~~~~~~~~~~~wv~  148 (212)
                      +.+.+.++||||+||.--+.-.+.           ..+|                           +..++.+.+.+++.
T Consensus        12 ~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~   91 (244)
T KOG3109|consen   12 GPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVH   91 (244)
T ss_pred             CccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhh
Confidence            456789999999999854321111           1122                           12345667777776


Q ss_pred             h----cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC-CeEEe
Q 028215          149 L----AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW-KKLFL  203 (212)
Q Consensus       149 ~----~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~-~~Lil  203 (212)
                      .    ...+|=+-.+++|-.|+.++  ..+.||.++.+   .++.|++.|+.+- +.++.
T Consensus        92 ~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~H---A~r~Lk~LGieDcFegii~  146 (244)
T KOG3109|consen   92 GRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVH---AIRILKKLGIEDCFEGIIC  146 (244)
T ss_pred             ccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHH---HHHHHHHhChHHhccceeE
Confidence            4    34778888899999999887  66778888754   4488999999873 44443

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=95.05  E-value=0.11  Score=43.50  Aligned_cols=39  Identities=8%  Similarity=-0.006  Sum_probs=32.6

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..+..-||..++++..++++++++++|+-.........+
T Consensus        70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe  108 (220)
T COG4359          70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFE  108 (220)
T ss_pred             hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHH
Confidence            457888999999999999999999999988766554333

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.67  E-value=0.11  Score=45.01  Aligned_cols=43  Identities=19%  Similarity=0.193  Sum_probs=33.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      -....++++++++|+.+|..+.++|+-+...+    .-|...|+..|
T Consensus       112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~----~~l~~~~l~~~  154 (237)
T KOG3085|consen  112 WKYLDGMQELLQKLRKKGTILGIISNFDDRLR----LLLLPLGLSAY  154 (237)
T ss_pred             ceeccHHHHHHHHHHhCCeEEEEecCCcHHHH----HHhhccCHHHh
Confidence            35678999999999999999999999887654    24555566443

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=94.63  E-value=0.091  Score=47.36  Aligned_cols=46  Identities=22%  Similarity=0.341  Sum_probs=39.2

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHC----CCeEEEEcCCCh
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQL----GFKIFLLTGRNE  180 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~----G~kI~~vTgR~~  180 (212)
                      ..+-+++|||||+|+.-                           ..++||+.+.++.|.++    .++.+|+||-..
T Consensus        33 ~~~fgfafDIDGVL~RG---------------------------~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg   82 (389)
T KOG1618|consen   33 PPTFGFAFDIDGVLFRG---------------------------HRPIPGALKALRRLVDNQGQLKIPFVFLTNGGG   82 (389)
T ss_pred             CCceeEEEecccEEEec---------------------------CCCCcchHHHHHHHHhcCCCeeccEEEEeCCCC
Confidence            45668999999999852                           27899999999999988    899999999653

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=92.91  E-value=0.18  Score=45.80  Aligned_cols=39  Identities=28%  Similarity=0.347  Sum_probs=32.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFA  193 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~  193 (212)
                      ..+.||+.++|++|+++|++++++||++....+   ..|+.+
T Consensus       183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~---~im~~l  221 (343)
T TIGR02244       183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTD---KGMKYL  221 (343)
T ss_pred             hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHH---HHHHHh
Confidence            566999999999999999999999999886444   556554

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=92.61  E-value=0.13  Score=41.75  Aligned_cols=44  Identities=34%  Similarity=0.431  Sum_probs=36.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSD  197 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~  197 (212)
                      ..++.|++.++++.|++.|++++++||..+.   .+....+..|+..
T Consensus       125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~---~a~~~~~~lgi~~  168 (215)
T PF00702_consen  125 RDPLRPGAKEALQELKEAGIKVAILTGDNES---TASAIAKQLGIFD  168 (215)
T ss_dssp             EEEBHTTHHHHHHHHHHTTEEEEEEESSEHH---HHHHHHHHTTSCS
T ss_pred             cCcchhhhhhhhhhhhccCcceeeeeccccc---ccccccccccccc
Confidence            4588999999999999999999999998775   3345677889853

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=92.39  E-value=0.21  Score=47.70  Aligned_cols=46  Identities=26%  Similarity=0.342  Sum_probs=39.2

Q ss_pred             CCCCChhHHHHHHHHHHCCC-eEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGF-KIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~-kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ..++.||+.+++++|+++|+ +++++||.++.   .+...+++.|+..+.
T Consensus       360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~---~a~~i~~~lgi~~~f  406 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRA---VAERVARELGIDEVH  406 (536)
T ss_pred             eccchHHHHHHHHHHHHcCCCcEEEEcCCCHH---HHHHHHHHcCChhhh
Confidence            46899999999999999999 99999999875   455778888987653

.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=91.90  E-value=0.3  Score=46.81  Aligned_cols=45  Identities=24%  Similarity=0.307  Sum_probs=38.5

Q ss_pred             CCCCChhHHHHHHHHHHCC-CeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLG-FKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G-~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      +.++.||+.+++++|+++| ++++++||.++.   .+..-++++|+..+
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~---~a~~i~~~lgi~~~  427 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRS---AAEAVAAELGIDEV  427 (556)
T ss_pred             cccchHhHHHHHHHHHHcCCCeEEEEeCCCHH---HHHHHHHHhCCCee
Confidence            5689999999999999999 999999999875   34467788899754

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=89.98  E-value=1.2  Score=42.48  Aligned_cols=65  Identities=26%  Similarity=0.370  Sum_probs=44.7

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      +..++|.|+|+|+||+--.  .+..+..+-...        ..++.+++...+++++.|+++|+-++++|-..+.
T Consensus       219 g~~kK~LVLDLDNTLWGGV--IGedGv~GI~Ls--------~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~  283 (574)
T COG3882         219 GKSKKALVLDLDNTLWGGV--IGEDGVDGIRLS--------NSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEK  283 (574)
T ss_pred             CcccceEEEecCCcccccc--cccccccceeec--------CCCCchhHHHHHHHHHHHHhccEEEEEecCCchh
Confidence            5578999999999998531  111111111010        1134467778899999999999999999988775

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=89.69  E-value=0.94  Score=36.52  Aligned_cols=96  Identities=14%  Similarity=0.210  Sum_probs=60.4

Q ss_pred             CCceEEEecCCCCCCChhhHhhh-cCCCCCCCH-HHHHHHHH----------------h----cCCCCChhHHHHHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAH-GFGSEIFNE-DAFDEWVD----------------L----AKAPALPASLTFYKELK  166 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~-~~g~~~~~~-~~~~~wv~----------------~----~~~~~~pg~lell~~Lk  166 (212)
                      .++.+.+|||.||.+...-|... .+-..++-. +...-|-.                +    ......|++.+.+++|-
T Consensus         2 ~kk~iaIDmD~vLadll~ewv~~~N~y~D~~lk~~di~gwdik~yv~~~~g~i~~il~ep~fFRnL~V~p~aq~v~keLt   81 (180)
T COG4502           2 NKKTIAIDMDTVLADLLREWVKRYNIYKDKLLKMSDIKGWDIKNYVKPECGKIYDILKEPHFFRNLGVQPFAQTVLKELT   81 (180)
T ss_pred             CCceEEeeHHHHHHHHHHHHHHHhhhccccCcChHhhcccchhhccCccCCeeeeeccCcchhhhcCccccHHHHHHHHH
Confidence            36789999999999876655432 111111111 11111111                0    23577899999999998


Q ss_pred             HCCCeEEEEcCC--ChhchHHHHHHHH-HCCCCCCCeEEeec
Q 028215          167 QLGFKIFLLTGR--NEFQRNTTEKNLL-FAGYSDWKKLFLRY  205 (212)
Q Consensus       167 ~~G~kI~~vTgR--~~~~~~~T~~nL~-~~G~~~~~~Lilr~  205 (212)
                      +. +.|.++|..  .....+.--+||. .+-|-.+.++++-+
T Consensus        82 ~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCg  122 (180)
T COG4502          82 SI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCG  122 (180)
T ss_pred             hh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEec
Confidence            77 999999987  3344556667874 46776777777654

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=89.38  E-value=0.65  Score=44.71  Aligned_cols=43  Identities=21%  Similarity=0.247  Sum_probs=36.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      ..++.|++.+++++|+++|++++++||.++..   ....+++.|++
T Consensus       403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~---a~~ia~~lgi~  445 (562)
T TIGR01511       403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKT---AKAVAKELGIN  445 (562)
T ss_pred             cccccHHHHHHHHHHHHcCCeEEEEcCCCHHH---HHHHHHHcCCc
Confidence            35789999999999999999999999998753   34566778886

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=88.55  E-value=0.37  Score=44.42  Aligned_cols=59  Identities=27%  Similarity=0.356  Sum_probs=41.9

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCCh
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNE  180 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~  180 (212)
                      .+.+.+.||+|||+++|.+-   ..|.   -++.+|        ....|.+.+=++.|.+.|++++|.|+...
T Consensus        73 ~~~K~i~FD~dgtlI~t~sg---~vf~---~~~~dw--------~~l~~~vp~Klktl~~~g~~l~iftnq~~  131 (422)
T KOG2134|consen   73 GGSKIIMFDYDGTLIDTKSG---KVFP---KGSMDW--------RILFPEVPSKLKTLYQDGIKLFIFTNQNG  131 (422)
T ss_pred             CCcceEEEecCCceeecCCc---ceee---ccCccc--------eeeccccchhhhhhccCCeEEEEEecccc
Confidence            46789999999999998541   1111   112233        25567777778899999999999998653

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=87.47  E-value=0.34  Score=39.16  Aligned_cols=18  Identities=33%  Similarity=0.231  Sum_probs=16.0

Q ss_pred             ceEEEecCCCCCCChhhH
Q 028215          111 DAWVFDIDETLLSNLPYY  128 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~  128 (212)
                      ++|+||.||||+++.+.+
T Consensus         2 ~~i~fDktGTLt~~~~~v   19 (215)
T PF00702_consen    2 DAICFDKTGTLTQGKMSV   19 (215)
T ss_dssp             SEEEEECCTTTBESHHEE
T ss_pred             eEEEEecCCCcccCeEEE
Confidence            689999999999987766

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=86.52  E-value=3.4  Score=39.44  Aligned_cols=36  Identities=11%  Similarity=0.232  Sum_probs=23.8

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHH-CCCC
Q 028215          154 ALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF-AGYS  196 (212)
Q Consensus       154 ~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~-~G~~  196 (212)
                      ..|.+.+   .++++|.. +++|+.++...+   .++++ .|+.
T Consensus       111 l~~~a~~---~~~~~g~~-vvVSASp~~~Ve---pfa~~~LGid  147 (497)
T PLN02177        111 VHPETWR---VFNSFGKR-YIITASPRIMVE---PFVKTFLGAD  147 (497)
T ss_pred             cCHHHHH---HHHhCCCE-EEEECCcHHHHH---HHHHHcCCCC
Confidence            4555554   44567754 999999986444   56665 5777

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=84.06  E-value=1.7  Score=37.05  Aligned_cols=46  Identities=24%  Similarity=0.397  Sum_probs=36.4

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      ..-.+.||+||||.-.                          .....|.+.++|+.|+.+ +.|.++-|++-.
T Consensus        10 ~~~l~lfdvdgtLt~~--------------------------r~~~~~e~~~~l~~lr~~-v~ig~VggsDl~   55 (252)
T KOG3189|consen   10 EETLCLFDVDGTLTPP--------------------------RQKVTPEMLEFLQKLRKK-VTIGFVGGSDLS   55 (252)
T ss_pred             CceEEEEecCCccccc--------------------------cccCCHHHHHHHHHHhhh-eEEEEeecHHHH
Confidence            3447899999999853                          126778999999998877 899999998743

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=83.70  E-value=2.2  Score=42.52  Aligned_cols=44  Identities=25%  Similarity=0.152  Sum_probs=37.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSD  197 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~  197 (212)
                      ..++.|++.+.+++|+++|++++++||.++.   .+....++.|+..
T Consensus       566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~---~a~~ia~~lgi~~  609 (741)
T PRK11033        566 QDTLRADARQAISELKALGIKGVMLTGDNPR---AAAAIAGELGIDF  609 (741)
T ss_pred             ecCCchhHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCCe
Confidence            4589999999999999999999999998775   4446778889874

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=83.20  E-value=1.4  Score=38.68  Aligned_cols=125  Identities=18%  Similarity=0.185  Sum_probs=69.8

Q ss_pred             hHHHHhhccC---ccccccHHHHHHHHHHHHhhccccC----CCCCceEEEecCCCCCCChh--hHhhhcCCCCCCCHHH
Q 028215           72 VEFVQKYMTG---EHYLSDSEIVSGYSLKHAKSANVSA----GDGKDAWVFDIDETLLSNLP--YYAAHGFGSEIFNEDA  142 (212)
Q Consensus        72 ~~~v~~y~~~---~~Y~~D~~~v~~~A~~y~~~~~~~~----~~~~~avvfDIDgTLldn~~--~~~~~~~g~~~~~~~~  142 (212)
                      .+|+..|-..   +....|+..+++..+.-+.-+....    .+..--|.||=|++|.+...  .|...+       -+.
T Consensus        76 ~~Yl~af~v~LFLSan~~DV~~Ai~~G~~Aa~v~~~~~~~~~~~~qlRIAFDgDaVLfsDesE~vy~~~G-------L~~  148 (264)
T PF06189_consen   76 YPYLKAFNVDLFLSANEDDVQEAIDAGIPAATVLPSPPDDDESDDQLRIAFDGDAVLFSDESERVYQEQG-------LEA  148 (264)
T ss_pred             HHHHHHhCCceEeeCCHHHHHHHHHcCCCcEEeecCCCCCCCCCCceEEEEcCCeEeecCcchHhHHhcc-------HHH
Confidence            4566555433   2334466655554443222221110    13345799999999997533  333321       123


Q ss_pred             HHHHHHhcC-C----CCChhHHHHHHHHHHC------CCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          143 FDEWVDLAK-A----PALPASLTFYKELKQL------GFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       143 ~~~wv~~~~-~----~~~pg~lell~~Lk~~------G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      |.+...... .    -|+...++-|.+++++      -+++++||.|+...-+-.++-|+.-|+.--+-++|
T Consensus       149 F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFL  220 (264)
T PF06189_consen  149 FHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFL  220 (264)
T ss_pred             HHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHh
Confidence            333333222 2    3445556666677655      37899999999665566778899888884333444

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=83.18  E-value=2.3  Score=40.58  Aligned_cols=33  Identities=12%  Similarity=-0.001  Sum_probs=24.9

Q ss_pred             HHHHHHHCCCeEEEEcCCChhchHHHHHHHHH-CCCCC
Q 028215          161 FYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF-AGYSD  197 (212)
Q Consensus       161 ll~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~-~G~~~  197 (212)
                      .++..++.| +++++|..++-..   +.+++. .|...
T Consensus       101 ~~~~~~~~g-~~vVVTAsPrvmV---EpFake~LG~D~  134 (498)
T PLN02499        101 AWKVFSSCD-KRVVVTRMPRVMV---ERFAKEHLRADE  134 (498)
T ss_pred             HHHHHHcCC-eEEEEeCCHHHHH---HHHHHHhcCCce
Confidence            556667788 9999999998644   468887 67763

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=82.79  E-value=0.19  Score=44.06  Aligned_cols=84  Identities=18%  Similarity=0.196  Sum_probs=52.0

Q ss_pred             CCCCceEEEecCCCCCCChhhHh---hhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhch
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYA---AHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQR  183 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~---~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~  183 (212)
                      ..+++.+|+|+||||..+.....   ...|.-    +..++.....--....|++-+|+..+-+. +.+++-|+..+...
T Consensus        86 ~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~----~v~~~~~~~~~yV~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya  160 (262)
T KOG1605|consen   86 TVGRKTLVLDLDETLVHSSLNLKPIVNADFTV----PVEIDGHIHQVYVRKRPHVDEFLSRVSKW-YELVLFTASLEVYA  160 (262)
T ss_pred             cCCCceEEEeCCCcccccccccCCCCCcceee----eeeeCCcceEEEEEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHH
Confidence            46899999999999887652100   011110    00000000011135678999999888777 88888888888777


Q ss_pred             HHHHHHHHH-CCC
Q 028215          184 NTTEKNLLF-AGY  195 (212)
Q Consensus       184 ~~T~~nL~~-~G~  195 (212)
                      ......|.. .|+
T Consensus       161 ~~v~D~LD~~~~i  173 (262)
T KOG1605|consen  161 DPLLDILDPDRKI  173 (262)
T ss_pred             HHHHHHccCCCCe
Confidence            777777775 444

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=82.34  E-value=2.2  Score=43.96  Aligned_cols=43  Identities=16%  Similarity=0.178  Sum_probs=35.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      ..|+.|++.+.+++++++|+++.++|||+....   ..-.++.|+-
T Consensus       566 ~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta---~~ia~~~gi~  608 (997)
T TIGR01106       566 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITA---KAIAKGVGII  608 (997)
T ss_pred             cCCChHHHHHHHHHHHHCCCeEEEECCCCHHHH---HHHHHHcCCC
Confidence            469999999999999999999999999997533   3445566773

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=82.22  E-value=2.5  Score=42.90  Aligned_cols=45  Identities=18%  Similarity=0.176  Sum_probs=36.9

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..|+.|++.+.++.|++.|+++.++||......   ..-.++.|+..+
T Consensus       526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA---~~ia~~~Gi~~~  570 (884)
T TIGR01522       526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETA---VSIARRLGMPSK  570 (884)
T ss_pred             cCcchhHHHHHHHHHHHCCCeEEEECCCCHHHH---HHHHHHcCCCCC
Confidence            358999999999999999999999999987533   345577788644

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	212
2i33_A	258	The Structure Of The Class C Acid Phosphatase From		1e-06
3ocy_A	262	Structure Of Recombinant Haemophilus Influenzae E(P		2e-04
3sf0_A	262	Structure Of Recombinant Haemophilus Influenzae E(P		7e-04
3ocu_A	262	Structure Of Recombinant Haemophilus Influenzae E(P		7e-04
3et4_A	255	Structure Of Recombinant Haemophilus Influenzae E(P		8e-04

>pdb|2I33|A Chain A, The Structure Of The Class C Acid Phosphatase From Bacillus Anthracis Length = 258

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 92  SGYSLKHAK--SANVSAGDGKDAWVFDIDETLLSNLPYYAAH---GFGSEIFNEDAFDEW 146
            GY+    K  +A     + K A V D+DET+L N P+ A     G G        +D+W
Sbjct: 39  QGYNTGQLKLDAALAKGTEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPY----KWDDW 94
Query: 147 VDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAG 194
           ++ A+A ALP S+ F K  +  G  I+ ++ R   Q + T KNL   G
Sbjct: 95  INKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVG 142

>pdb|3OCY|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase Complexed With Inorganic Phosphate Length = 262

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 116 DIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLL 175
           D+DET+L N PY       ++ F+   +  WVD  ++ A+P ++ F   +     K+F +
Sbjct: 64  DLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYV 123
Query: 176 TGRNEFQRNTTEK 188
           T R    +++TEK
Sbjct: 124 TNR----KDSTEK 132

>pdb|3SF0|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase Mutant D64n Complexed With 5'amp Length = 262

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 116 DIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLL 175
           ++DET+L N PY       ++ F+   +  WVD  ++ A+P ++ F   +     K+F +
Sbjct: 64  NLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYV 123
Query: 176 TGRNEFQRNTTEK 188
           T R    +++TEK
Sbjct: 124 TNR----KDSTEK 132

>pdb|3OCU|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase Mutant D66n Complexed With Nmn Length = 262

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 116 DIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLL 175
           D++ET+L N PY       ++ F+   +  WVD  ++ A+P ++ F   +     K+F +
Sbjct: 64  DLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYV 123
Query: 176 TGRNEFQRNTTEK 188
           T R    +++TEK
Sbjct: 124 TNR----KDSTEK 132

>pdb|3ET4|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase Length = 255

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 116 DIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLL 175
           D+DET+L N PY       ++ F+   +  WVD  ++ A+P ++ F   +     K+F +
Sbjct: 65  DLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHKGKVFYV 124
Query: 176 TGRNEFQRNTTEK 188
           T R    ++++EK
Sbjct: 125 TNR----KDSSEK 133

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	212
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	2e-24
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	7e-24
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	1e-23
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	2e-10

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A Length = 258

 Score = 95.8 bits (237), Expect = 2e-24
 Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 1/130 (0%)

Query: 78  YMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEI 137
           Y T     +              +A     + K A V D+DET+L N P+ A      + 
Sbjct: 27  YQTAGEMKALYYQGYNTGQLKLDAALAKGTEKKPAIVLDLDETVLDNSPHQAMSVKTGKG 86

Query: 138 FNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSD 197
           +    +D+W++ A+A ALP S+ F K  +  G  I+ ++ R   Q + T KNL   G   
Sbjct: 87  YPYK-WDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQ 145

Query: 198 WKKLFLRYRN 207
             K  +  ++
Sbjct: 146 ATKEHILLQD 155

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A Length = 262

 Score = 94.7 bits (234), Expect = 7e-24
 Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 7/133 (5%)

Query: 76  QKYMTGEHYLSDSEIVSGYSL------KHAKSANVSAGDGKDAWVFDIDETLLSNLPYYA 129
           Q+ + G +++ DS      +       K A      A   K A V D++ET+L N PY  
Sbjct: 18  QQAVLGLNWMQDSGEYKALAYQAYNAAKVAFDHAKVAKGKKKAVVADLNETMLDNSPYAG 77

Query: 130 AHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNE-FQRNTTEK 188
                ++ F+   +  WVD  ++ A+P ++ F   +     K+F +T R +  +++ T  
Sbjct: 78  WQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTID 137

Query: 189 NLLFAGYSDWKKL 201
           ++   G++  ++ 
Sbjct: 138 DMKRLGFNGVEES 150

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} Length = 260

 Score = 93.9 bits (232), Expect = 1e-23
 Identities = 25/144 (17%), Positives = 57/144 (39%), Gaps = 4/144 (2%)

Query: 66  SVPSRCVEFVQKYMTGEHYLSDSEIVSGYSL-KHAKSANVSAGDGKDAWVFDIDETLLSN 124
            +  +    +        Y + +     ++  K A     +    K A V D+DET++ N
Sbjct: 15  KLQQQVAMGLIWTQQSGEYAALAH--QAFNSAKMAFDHAKAKKGKKKAVVVDLDETMIDN 72

Query: 125 LPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRN-EFQR 183
             Y        + F+   + +WVD  ++ A+P ++ F   +   G  +F ++ R  + ++
Sbjct: 73  SAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEK 132

Query: 184 NTTEKNLLFAGYSDWKKLFLRYRN 207
             T  ++   G++      L  + 
Sbjct: 133 AGTVDDMKRLGFTGVNDKTLLLKK 156

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A Length = 211

 Score = 57.5 bits (138), Expect = 2e-10
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 8/94 (8%)

Query: 106 AGDGKDAWVFDIDETLLSNLPYYAAHGFG------SEIFNEDAFDEWV--DLAKAPALPA 157
           AG    A  FDID+T+L + P +              + N   +++        +     
Sbjct: 33  AGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEV 92

Query: 158 SLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL 191
           +        + G  IF +TGR+  +  T  K L 
Sbjct: 93  ARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLA 126

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	212
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.92
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.92
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.83
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	99.05
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.98
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	98.97
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	98.92
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.89
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	98.89
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	98.85
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.82
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.78
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	98.78
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.78
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.77
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	98.74
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.74
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	98.72
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.72
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.72
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	98.71
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	98.71
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	98.71
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	98.71
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	98.7
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.69
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.69
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.68
2hsz_A	243	Novel predicted phosphatase; structural genomics,	98.67
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	98.67
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	98.67
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.67
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	98.66
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	98.63
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	98.63
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	98.63
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	98.63
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	98.62
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.62
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	98.61
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	98.61
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	98.6
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	98.6
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.6
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	98.6
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	98.59
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	98.59
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	98.58
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.57
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	98.55
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.55
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	98.55
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	98.55
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.54
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.53
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	98.53
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	98.53
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.53
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	98.52
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	98.52
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.51
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	98.51
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	98.5
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.5
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	98.48
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.48
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	98.47
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	98.47
2zg6_A	220	Putative uncharacterized protein ST2620, probable	98.46
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	98.45
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.45
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	98.45
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	98.44
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	98.44
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	98.44
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	98.44
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	98.44
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	98.44
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.44
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.43
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	98.43
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	98.43
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	98.42
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	98.42
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	98.42
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	98.41
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	98.41
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.41
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.4
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.4
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.4
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	98.4
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	98.4
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.39
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	98.37
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.37
1te2_A	226	Putative phosphatase; structural genomics, phospha	98.36
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	98.36
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	98.35
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	98.35
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	98.34
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	98.34
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	98.33
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	98.33
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	98.33
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	98.32
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	98.32
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	98.31
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.31
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	98.3
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.29
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	98.29
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	98.29
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	98.29
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.29
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	98.27
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.27
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	98.24
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	98.23
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	98.23
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	98.23
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.22
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.22
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	98.21
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	98.2
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	98.18
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.17
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	98.16
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	98.15
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	98.14
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	98.12
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	98.11
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	98.09
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	98.06
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.0
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	97.95
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	97.89
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	97.84
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.84
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	97.84
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	97.74
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	97.68
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	97.62
4gxt_A	385	A conserved functionally unknown protein; structur	97.54
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	97.49
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	97.46
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	97.34
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	96.34
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	97.22
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	96.53
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	95.71
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	95.53
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	91.34
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	90.88
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	85.04
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	84.16
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	81.94
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	81.8
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	80.93

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.92  E-value=8e-26  Score=194.97  Aligned_cols=136  Identities=18%  Similarity=0.271  Sum_probs=120.1

Q ss_pred             HHHHhhccCccccccHHHHHHHHHHHHhhccccCCCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCC
Q 028215           73 EFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKA  152 (212)
Q Consensus        73 ~~v~~y~~~~~Y~~D~~~v~~~A~~y~~~~~~~~~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~  152 (212)
                      --+..|.++++|++|+..+.+.|..|++..... .+.+++|||||||||+||.+|+..++++..+|+++.|++|+..+.+
T Consensus        22 ~a~~w~q~S~ey~a~~~q~~~~A~~~l~~~~~~-~g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~  100 (260)
T 3pct_A           22 MGLIWTQQSGEYAALAHQAFNSAKMAFDHAKAK-KGKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQS  100 (260)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC------CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCC
Confidence            346678889999999999999999999886444 3455799999999999999999988777788999999999999999


Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChh-chHHHHHHHHHCCCCCCC--eEEeecCCCc
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEF-QRNTTEKNLLFAGYSDWK--KLFLRYRNRY  209 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~-~~~~T~~nL~~~G~~~~~--~Lilr~~~~~  209 (212)
                      +++||++++++.|+++|++|+|+|||++. .++.|.++|+++||+.|+  +|+||+...+
T Consensus       101 ~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~  160 (260)
T 3pct_A          101 AAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDKSN  160 (260)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSCSS
T ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCCCC
Confidence            99999999999999999999999999998 899999999999999887  7999975544

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.92  E-value=8.1e-26  Score=195.14  Aligned_cols=136  Identities=20%  Similarity=0.289  Sum_probs=124.3

Q ss_pred             HHHHhhccCccccccHHHHHHHHHHHHhhccccCCCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCC
Q 028215           73 EFVQKYMTGEHYLSDSEIVSGYSLKHAKSANVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKA  152 (212)
Q Consensus        73 ~~v~~y~~~~~Y~~D~~~v~~~A~~y~~~~~~~~~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~  152 (212)
                      --+..|.++++|+.++..+.+.|..+++..... ++++++|||||||||+||.+|+..++++..+|+++.|++|+..+.+
T Consensus        22 ~a~~w~q~S~Ey~al~~q~yn~A~~~ld~~~~~-~~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~  100 (262)
T 3ocu_A           22 LGLNWMQDSGEYKALAYQAYNAAKVAFDHAKVA-KGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQS  100 (262)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC-TTCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCC
Confidence            345677889999999999999999999887665 6789999999999999999999988877788999999999999999


Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChh-chHHHHHHHHHCCCCCCC--eEEeecCCCc
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEF-QRNTTEKNLLFAGYSDWK--KLFLRYRNRY  209 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~-~~~~T~~nL~~~G~~~~~--~Lilr~~~~~  209 (212)
                      +++||++++++.|+++|++|+|+|||++. .++.|+++|+++||+.|+  +|+||+...+
T Consensus       101 ~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~  160 (262)
T 3ocu_A          101 RAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKSA  160 (262)
T ss_dssp             EECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSCSC
T ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCCCC
Confidence            99999999999999999999999999998 899999999999999888  9999976544

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.83  E-value=5.3e-21  Score=164.20  Aligned_cols=135  Identities=25%  Similarity=0.277  Sum_probs=118.0

Q ss_pred             hHHHHhhccCccccccHHHHHHHHHHHHhhc-cccCCCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhc
Q 028215           72 VEFVQKYMTGEHYLSDSEIVSGYSLKHAKSA-NVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLA  150 (212)
Q Consensus        72 ~~~v~~y~~~~~Y~~D~~~v~~~A~~y~~~~-~~~~~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~  150 (212)
                      ..-+..|.++++|++|+..+.+.|..++++. ... ++++++|||||||||+++.+++.....+...| ++.|++|+...
T Consensus        21 ~~~~~~~~~s~ey~a~~~q~y~~a~~~~~~~~~~~-~~~~kavifDlDGTLld~~~~~~~~~~~~~~~-~~~~~~~~~~~   98 (258)
T 2i33_A           21 LMADLWYQTAGEMKALYYQGYNTGQLKLDAALAKG-TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGY-PYKWDDWINKA   98 (258)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEECSBTTTEECHHHHHHHHHHSCCT-TTTHHHHHHHC
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCEEEEeCcccCcCCHHHHHHHHhcccch-HHHHHHHHHcC
Confidence            4456677799999999999999999998665 344 57899999999999999999988765555667 77899999999


Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC--CCCeEEeecCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS--DWKKLFLRYRNR  208 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~--~~~~Lilr~~~~  208 (212)
                      ..+++||+.++|+.|+++|++++++|||+...+..+.++|..+|+.  .++.+++++++.
T Consensus        99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~  158 (258)
T 2i33_A           99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE  158 (258)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC
T ss_pred             CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC
Confidence            9999999999999999999999999999988888899999999999  788999987654

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=99.05  E-value=3.9e-10  Score=88.70  Aligned_cols=66  Identities=15%  Similarity=0.123  Sum_probs=55.2

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .++|+|||||||+++.       ++               .-.++.|++.+.+++|+++|++++++|||+......+.++
T Consensus         3 ~k~i~~DlDGTL~~~~-------~~---------------~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~   60 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHR-------YP---------------RIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEW   60 (142)
T ss_dssp             CCEEEECCBTTTBCSC-------TT---------------SCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHH
T ss_pred             CeEEEEECcCCCCCCC-------Cc---------------cccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHH
Confidence            6799999999999851       00               0114678999999999999999999999997777889999


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      |.+.|++.
T Consensus        61 l~~~gi~~   68 (142)
T 2obb_A           61 CRARGLEF   68 (142)
T ss_dssp             HHTTTCCC
T ss_pred             HHHcCCCe
Confidence            99999984

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=98.98  E-value=1.3e-09  Score=87.58  Aligned_cols=50  Identities=12%  Similarity=0.047  Sum_probs=41.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..++.||+.++++.|+++|++++++||.+..   .+...++..|+..|...+.
T Consensus        82 ~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~---~~~~~l~~~~l~~~fd~~~  131 (216)
T 3kbb_A           82 LLKENPGVREALEFVKSKRIKLALATSTPQR---EALERLRRLDLEKYFDVMV  131 (216)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHTTCGGGCSEEE
T ss_pred             hcccCccHHHHHHHHHHcCCCcccccCCcHH---HHHHHHHhcCCCccccccc
Confidence            4678999999999999999999999999875   3446788899988754443

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=98.97  E-value=3.4e-09  Score=80.78  Aligned_cols=74  Identities=19%  Similarity=0.205  Sum_probs=56.6

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc-------
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ-------  182 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~-------  182 (212)
                      .++++|||||||+++...         .|           ....+.|++.+.++.|+++|++++++|||+...       
T Consensus         1 ik~i~~DlDGTL~~~~~~---------~~-----------~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~   60 (126)
T 1xpj_A            1 MKKLIVDLDGTLTQANTS---------DY-----------RNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGK   60 (126)
T ss_dssp             CCEEEECSTTTTBCCCCS---------CG-----------GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHH
T ss_pred             CCEEEEecCCCCCCCCCC---------cc-----------ccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhccccccc
Confidence            368999999999986321         01           012567899999999999999999999998653       


Q ss_pred             -----hHHHHHHHHHCCCCCCCeEEee
Q 028215          183 -----RNTTEKNLLFAGYSDWKKLFLR  204 (212)
Q Consensus       183 -----~~~T~~nL~~~G~~~~~~Lilr  204 (212)
                           ...+.+++++.|++ ++.+++|
T Consensus        61 ~~~~~~~~i~~~~~~~~~~-~~~~~~~   86 (126)
T 1xpj_A           61 INIHTLPIITEWLDKHQVP-YDEILVG   86 (126)
T ss_dssp             HHHHTHHHHHHHHHHTTCC-CSEEEEC
T ss_pred             cCHHHHHHHHHHHHHcCCC-EEEEEeC
Confidence                 45678899999886 5556554

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=98.92  E-value=3.6e-09  Score=83.77  Aligned_cols=94  Identities=15%  Similarity=0.177  Sum_probs=61.6

Q ss_pred             CceEEEecCCCCCCChhhHhh---hcCCCC---------C----C--CHHHHHHHHHh----cCCCCChhHHHHHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAA---HGFGSE---------I----F--NEDAFDEWVDL----AKAPALPASLTFYKELKQ  167 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~---~~~g~~---------~----~--~~~~~~~wv~~----~~~~~~pg~lell~~Lk~  167 (212)
                      +++|+||+||||+|+.+.+..   ..+|..         +    +  +.+.+.++...    ...+++||+.++|+.|++
T Consensus         4 ~~~viFD~DGtL~Ds~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~   83 (180)
T 3bwv_A            4 RQRIAIDMDEVLADTLGAVVKAVNERADLNIKMESLNGKKLKHMIPEHEGLVMDILKEPGFFRNLDVMPHAQEVVKQLNE   83 (180)
T ss_dssp             CCEEEEETBTTTBCHHHHHHHHHHHHSCCCCCGGGCTTCCC--------CHHHHHHHSTTGGGSCCBCTTHHHHHHHHTT
T ss_pred             ccEEEEeCCCcccccHHHHHHHHHHHhCCCCCHHHHcCccHHHHCCchHHHHHHHHhCcchhccCCCCcCHHHHHHHHHh
Confidence            479999999999999986543   123211         0    0  11234444321    356899999999999998


Q ss_pred             CCCeEEEEcCCCh--hchHHHHHHHHH-CCCCCCCeEEee
Q 028215          168 LGFKIFLLTGRNE--FQRNTTEKNLLF-AGYSDWKKLFLR  204 (212)
Q Consensus       168 ~G~kI~~vTgR~~--~~~~~T~~nL~~-~G~~~~~~Lilr  204 (212)
                      + ++++++||+.+  .....+..+|.+ +|...++..++-
T Consensus        84 ~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~  122 (180)
T 3bwv_A           84 H-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFC  122 (180)
T ss_dssp             T-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEEC
T ss_pred             c-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEe
Confidence            5 99999999842  123456678877 566556656654

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.89  E-value=3.9e-09  Score=84.57  Aligned_cols=84  Identities=18%  Similarity=0.197  Sum_probs=61.4

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.++|+||+||||++....+    |... + .+.      ....++.||+.++|+.|+++|++++++||++...+.....
T Consensus         2 ~ik~vifD~DgtL~~~~~~~----y~~~-~-~~~------~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~   69 (189)
T 3ib6_A            2 SLTHVIWDMGETLNTVPNTR----YDHH-P-LDT------YPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKR   69 (189)
T ss_dssp             -CCEEEECTBTTTBCCCTTS----SCSS-C-GGG------CTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHH
T ss_pred             CceEEEEcCCCceeeccchh----hhhH-H-Hhc------cCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHH
Confidence            36799999999998742210    1000 0 000      1346899999999999999999999999998766667778


Q ss_pred             HHHHCCCCCCCeEEee
Q 028215          189 NLLFAGYSDWKKLFLR  204 (212)
Q Consensus       189 nL~~~G~~~~~~Lilr  204 (212)
                      .|++.|+..|...+.-
T Consensus        70 ~l~~~gl~~~fd~i~~   85 (189)
T 3ib6_A           70 VLTNFGIIDYFDFIYA   85 (189)
T ss_dssp             HHHHTTCGGGEEEEEE
T ss_pred             HHHhcCchhheEEEEE
Confidence            9999999877555443

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=98.89  E-value=5.2e-09  Score=84.67  Aligned_cols=85  Identities=16%  Similarity=0.193  Sum_probs=59.3

Q ss_pred             CceEEEecCCCCCCChhhHhhh-cCCCC-----CC--------C---------------HHHHHHHHHhcCCCCChhHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAH-GFGSE-----IF--------N---------------EDAFDEWVDLAKAPALPASLT  160 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~-~~g~~-----~~--------~---------------~~~~~~wv~~~~~~~~pg~le  160 (212)
                      .++|+||+||||+|+.+...-. .+|..     .+        +               .+.+.++......++.||+.+
T Consensus        14 ~k~viFD~DGTLvd~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   93 (225)
T 1nnl_A           14 ADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRE   93 (225)
T ss_dssp             CSEEEEETBTTTBSSCHHHHHHHHTTCTTTC------------CHHHHHHHHHHHHCCCHHHHHHHHHHSCCCBCTTHHH
T ss_pred             CCEEEEeCcccccccccHHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhcCCHHHHHHHHHhccCCCCccHHH
Confidence            5799999999999997754321 12210     00        0               011222333345789999999


Q ss_pred             HHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCC
Q 028215          161 FYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSD  197 (212)
Q Consensus       161 ll~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~  197 (212)
                      +++.|+++|++++++||++..   .+...|+++|+..
T Consensus        94 ~l~~L~~~g~~~~i~T~~~~~---~~~~~l~~~gl~~  127 (225)
T 1nnl_A           94 LVSRLQERNVQVFLISGGFRS---IVEHVASKLNIPA  127 (225)
T ss_dssp             HHHHHHHTTCEEEEEEEEEHH---HHHHHHHHTTCCG
T ss_pred             HHHHHHHCCCcEEEEeCChHH---HHHHHHHHcCCCc
Confidence            999999999999999999875   3457888899973

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=98.85  E-value=6.5e-09  Score=83.29  Aligned_cols=75  Identities=15%  Similarity=0.116  Sum_probs=51.8

Q ss_pred             CCceEEEecCCCCCCChhhHhhh---cC-CCCCCCH--------------------HHHHHHHHh----cCCCCChhHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAH---GF-GSEIFNE--------------------DAFDEWVDL----AKAPALPASLT  160 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~---~~-g~~~~~~--------------------~~~~~wv~~----~~~~~~pg~le  160 (212)
                      ++++|+||+||||+|+.+.+...   .+ |..+.+.                    +.+.+...+    ...+++||+.+
T Consensus         1 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e   80 (193)
T 2i7d_A            1 RSVRVLVDMDGVLADFEAGLLRGFRRRFPEEPHVPLEQRRGFLAREQYRALRPDLADKVASVYEAPGFFLDLEPIPGALD   80 (193)
T ss_dssp             CCEEEEECSBTTTBCHHHHHHHHHHHHSTTSCCCCGGGCCSSCHHHHHHHHCTTHHHHHHHHHTSTTTTTTCCBCTTHHH
T ss_pred             CCcEEEEECCCcCccchhHHHHHHHHHhcCCCCCCHHHHHHhhHHHHHHHHhHHHHHHHHHHHHhcCccccCccCcCHHH
Confidence            36899999999999998866531   11 2111111                    112222222    24688999999


Q ss_pred             HHHHHHHC-CCeEEEEcCCChhch
Q 028215          161 FYKELKQL-GFKIFLLTGRNEFQR  183 (212)
Q Consensus       161 ll~~Lk~~-G~kI~~vTgR~~~~~  183 (212)
                      +++.|+++ |++++++||++....
T Consensus        81 ~L~~L~~~~g~~~~ivT~~~~~~~  104 (193)
T 2i7d_A           81 AVREMNDLPDTQVFICTSPLLKYH  104 (193)
T ss_dssp             HHHHHHTSTTEEEEEEECCCSSCT
T ss_pred             HHHHHHhCCCCeEEEEeCCChhhH
Confidence            99999999 999999999987543

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.82  E-value=6e-09  Score=86.96  Aligned_cols=62  Identities=24%  Similarity=0.366  Sum_probs=52.5

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+|||||||++..                           .++|++.+.+++|+++|++++++|||+........+
T Consensus         7 ~~kli~~DlDGTLl~~~---------------------------~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~   59 (268)
T 3qgm_A            7 DKKGYIIDIDGVIGKSV---------------------------TPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLE   59 (268)
T ss_dssp             CCSEEEEECBTTTEETT---------------------------EECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHH
T ss_pred             cCCEEEEcCcCcEECCC---------------------------EeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHH
Confidence            36899999999999741                           367899999999999999999999977666666778


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .|+..|+..
T Consensus        60 ~l~~lg~~~   68 (268)
T 3qgm_A           60 RLRSFGLEV   68 (268)
T ss_dssp             HHHHTTCCC
T ss_pred             HHHHCCCCC
Confidence            889999863

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.78  E-value=9.1e-09  Score=84.74  Aligned_cols=84  Identities=24%  Similarity=0.218  Sum_probs=56.3

Q ss_pred             CCCceEEEecCCCCCCChhhHh--hhcCCC--CC--CCHHHHHHHHHh--cCCCCChhHHHHHHHHHHCCCeEEEEcCCC
Q 028215          108 DGKDAWVFDIDETLLSNLPYYA--AHGFGS--EI--FNEDAFDEWVDL--AKAPALPASLTFYKELKQLGFKIFLLTGRN  179 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~--~~~~g~--~~--~~~~~~~~wv~~--~~~~~~pg~lell~~Lk~~G~kI~~vTgR~  179 (212)
                      ..+++|+||+||||+|+.+.+.  ...+..  ..  .+.+.|.++...  ....+.|++.++++.|+++|++++++||++
T Consensus        35 ~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~  114 (211)
T 2b82_A           35 RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRS  114 (211)
T ss_dssp             CCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSC
T ss_pred             CCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence            3578999999999999987542  111110  01  134445555432  123467899999999999999999999998


Q ss_pred             hhchHHHHHHHH
Q 028215          180 EFQRNTTEKNLL  191 (212)
Q Consensus       180 ~~~~~~T~~nL~  191 (212)
                      ........+.|.
T Consensus       115 ~~~~~~~l~~l~  126 (211)
T 2b82_A          115 PTKTETVSKTLA  126 (211)
T ss_dssp             CCSSCCHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            765444444443

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=98.78  E-value=1.3e-08  Score=81.90  Aligned_cols=76  Identities=17%  Similarity=0.160  Sum_probs=51.7

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhh------cCCC---C---CCCH-HH--------HHHHH---Hh----cCCCCChhH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAH------GFGS---E---IFNE-DA--------FDEWV---DL----AKAPALPAS  158 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~------~~g~---~---~~~~-~~--------~~~wv---~~----~~~~~~pg~  158 (212)
                      ++++++|+||+||||+|+.+.+...      .++.   .   .+.. +.        ..++.   ..    ...+++||+
T Consensus         1 ~~~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   80 (197)
T 1q92_A            1 GGRALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELEPLPGA   80 (197)
T ss_dssp             -CCCEEEEECSBTTTBCHHHHHHHHHHHHCTTSCCCCGGGCCSSCHHHHHHHHSTTHHHHHHHHHTSTTTTTTCCBCTTH
T ss_pred             CCCceEEEEeCCCCCccCcHHHHHHHHHHHhcCCCCCHHHhcCCcHHHHHHhcCHHHHHHHHHHHHhhhhhhcCCcCcCH
Confidence            3568899999999999998865431      1110   0   1110 11        11111   11    246889999


Q ss_pred             HHHHHHHHHC-CCeEEEEcCCChhc
Q 028215          159 LTFYKELKQL-GFKIFLLTGRNEFQ  182 (212)
Q Consensus       159 lell~~Lk~~-G~kI~~vTgR~~~~  182 (212)
                      .++++.|+++ |++++++||+++..
T Consensus        81 ~e~L~~L~~~~g~~~~ivT~~~~~~  105 (197)
T 1q92_A           81 VEAVKEMASLQNTDVFICTSPIKMF  105 (197)
T ss_dssp             HHHHHHHHHSTTEEEEEEECCCSCC
T ss_pred             HHHHHHHHhcCCCeEEEEeCCccch
Confidence            9999999999 99999999998754

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.78  E-value=9e-09  Score=80.97  Aligned_cols=68  Identities=19%  Similarity=0.244  Sum_probs=50.6

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh--------
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF--------  181 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~--------  181 (212)
                      +++++||+||||++....|...                 ....++.||+.+++++|+++|++++++||++..        
T Consensus         1 ~k~v~~D~DGtL~~~~~~~~~~-----------------~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~   63 (179)
T 3l8h_A            1 MKLIILDRDGVVNQDSDAFVKS-----------------PDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTA   63 (179)
T ss_dssp             CCEEEECSBTTTBCCCTTCCCS-----------------GGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHH
T ss_pred             CCEEEEcCCCccccCCCccCCC-----------------HHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHH
Confidence            4789999999999864321110                 123488999999999999999999999999851        


Q ss_pred             ----chHHHHHHHHHCC
Q 028215          182 ----QRNTTEKNLLFAG  194 (212)
Q Consensus       182 ----~~~~T~~nL~~~G  194 (212)
                          ..+.....|++.|
T Consensus        64 ~~~~~~~~~~~~l~~~g   80 (179)
T 3l8h_A           64 TLNAIHDKMHRALAQMG   80 (179)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCC
Confidence                0133456778888

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.77  E-value=2.7e-08  Score=81.03  Aligned_cols=47  Identities=17%  Similarity=0.224  Sum_probs=39.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ..++.||+.++++.|+++|++++++||++...   ....|+..|+..+..
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~l~~~f~  149 (240)
T 2no4_A          103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEM---LQAALKASKLDRVLD  149 (240)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHTTCGGGCS
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHhcCcHHHcC
Confidence            46789999999999999999999999998653   446788889887643

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.74  E-value=8.6e-09  Score=86.04  Aligned_cols=62  Identities=15%  Similarity=0.273  Sum_probs=51.9

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+|||||||+++.                           .++|++.+.+++|+++|++++++|||+........+
T Consensus         5 ~~kli~~DlDGTLl~~~---------------------------~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~   57 (266)
T 3pdw_A            5 TYKGYLIDLDGTMYNGT---------------------------EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVAD   57 (266)
T ss_dssp             CCSEEEEECSSSTTCHH---------------------------HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHH
T ss_pred             cCCEEEEeCcCceEeCC---------------------------EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHH
Confidence            37899999999999741                           246789999999999999999999977666666778


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .|...|+..
T Consensus        58 ~l~~lg~~~   66 (266)
T 3pdw_A           58 KLVSFDIPA   66 (266)
T ss_dssp             HHHHTTCCC
T ss_pred             HHHHcCCCC
Confidence            889999863

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.74  E-value=7.3e-09  Score=77.16  Aligned_cols=64  Identities=11%  Similarity=0.013  Sum_probs=49.4

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.++++||+||||.++.                           ++.||+.+++++|+++|++++++||++.....   .
T Consensus         1 ~~k~i~~D~DgtL~~~~---------------------------~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~---~   50 (137)
T 2pr7_A            1 GMRGLIVDYAGVLDGTD---------------------------EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGA---A   50 (137)
T ss_dssp             CCCEEEECSTTTTSSCH---------------------------HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGG---H
T ss_pred             CCcEEEEeccceecCCC---------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHH---H
Confidence            35799999999995431                           46799999999999999999999999876543   4


Q ss_pred             HHHHCCCCCC-CeEE
Q 028215          189 NLLFAGYSDW-KKLF  202 (212)
Q Consensus       189 nL~~~G~~~~-~~Li  202 (212)
                      .|+..|+..+ +.++
T Consensus        51 ~l~~~~l~~~f~~i~   65 (137)
T 2pr7_A           51 PIRELETNGVVDKVL   65 (137)
T ss_dssp             HHHHHHHTTSSSEEE
T ss_pred             HHHHCChHhhccEEE
Confidence            5666676654 3443

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=98.72  E-value=4e-08  Score=81.38  Aligned_cols=47  Identities=11%  Similarity=0.084  Sum_probs=38.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      .+++||+.++++.|+++|++++++|++...     ...|++.|+..+...+.
T Consensus        94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~~-----~~~l~~~gl~~~fd~i~  140 (243)
T 4g9b_A           94 NAVLPGIRSLLADLRAQQISVGLASVSLNA-----PTILAALELREFFTFCA  140 (243)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCCTTH-----HHHHHHTTCGGGCSEEC
T ss_pred             ccccccHHHHHHhhhcccccceecccccch-----hhhhhhhhhcccccccc
Confidence            468999999999999999999999998642     24588899988765444

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.72  E-value=2.5e-08  Score=79.59  Aligned_cols=86  Identities=17%  Similarity=0.075  Sum_probs=55.5

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHH--hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVD--LAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTT  186 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~--~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T  186 (212)
                      .+++|+||+||||++...   .. +.+.++....-..+..  ....++.||+.++++.|+++|++++++||++.  +..+
T Consensus        26 ~~k~vifDlDGTL~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~--~~~~   99 (187)
T 2wm8_A           26 LPKLAVFDLDYTLWPFWV---DT-HVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSE--IEGA   99 (187)
T ss_dssp             SCSEEEECSBTTTBSSCT---TT-SSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSC--HHHH
T ss_pred             ccCEEEEcCCCCcchHHH---hh-ccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCC--hHHH
Confidence            468999999999985421   11 1111111000000000  12357899999999999999999999999983  1245


Q ss_pred             HHHHHHCCCCCCCe
Q 028215          187 EKNLLFAGYSDWKK  200 (212)
Q Consensus       187 ~~nL~~~G~~~~~~  200 (212)
                      ...|+..|+..+..
T Consensus       100 ~~~l~~~gl~~~f~  113 (187)
T 2wm8_A          100 NQLLELFDLFRYFV  113 (187)
T ss_dssp             HHHHHHTTCTTTEE
T ss_pred             HHHHHHcCcHhhcc
Confidence            57888999987643

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.72  E-value=2.8e-08  Score=81.07  Aligned_cols=76  Identities=16%  Similarity=0.248  Sum_probs=57.6

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc------
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ------  182 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~------  182 (212)
                      ..++++||+||||++..+|...                  ....+++||+.+++++|+++|++++++||++...      
T Consensus        24 ~~k~v~~D~DGTL~~~~~~~~~------------------~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~   85 (211)
T 2gmw_A           24 SVPAIFLDRDGTINVDHGYVHE------------------IDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTE   85 (211)
T ss_dssp             CBCEEEECSBTTTBCCCSSCCS------------------GGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCH
T ss_pred             cCCEEEEcCCCCeECCCCcccC------------------cccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCH
Confidence            4679999999999976422110                  1235789999999999999999999999998421      


Q ss_pred             ------hHHHHHHHHHCCCCCCCeEEe
Q 028215          183 ------RNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       183 ------~~~T~~nL~~~G~~~~~~Lil  203 (212)
                            .......|++.|+. ++.++.
T Consensus        86 ~~~~~~~~~~~~~l~~~gl~-f~~~~~  111 (211)
T 2gmw_A           86 AQFETLTEWMDWSLADRDVD-LDGIYY  111 (211)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC-CSEEEE
T ss_pred             HHHHHHHHHHHHHHHHcCCc-eEEEEE
Confidence                  23456788899998 666554

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=98.71  E-value=2e-08  Score=80.03  Aligned_cols=88  Identities=23%  Similarity=0.330  Sum_probs=60.8

Q ss_pred             CCceEEEecCCCCCCChhhHhh--hcCCCCCC----------CH---HHHHHHHH------hcCCCCChhHHHHHHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAA--HGFGSEIF----------NE---DAFDEWVD------LAKAPALPASLTFYKELKQ  167 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~--~~~g~~~~----------~~---~~~~~wv~------~~~~~~~pg~lell~~Lk~  167 (212)
                      ..++|+||+||||+++.+.+..  ..+|....          ..   +...+|..      .....+.||+.++++.|++
T Consensus         5 ~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~   84 (205)
T 3m9l_A            5 EIKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELAG   84 (205)
T ss_dssp             GCCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHHHHHHHHHHHHHTHHHHEEEEEECTTHHHHHHHHHH
T ss_pred             cCCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHh
Confidence            3689999999999987654442  12332111          11   11222222      1345789999999999999


Q ss_pred             CCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          168 LGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       168 ~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      +|++++++|+.+..   .+...++..|+..+.
T Consensus        85 ~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f  113 (205)
T 3m9l_A           85 RGYRLGILTRNARE---LAHVTLEAIGLADCF  113 (205)
T ss_dssp             TTCEEEEECSSCHH---HHHHHHHHTTCGGGS
T ss_pred             cCCeEEEEeCCchH---HHHHHHHHcCchhhc
Confidence            99999999999865   445788889987665

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=98.71  E-value=1.6e-08  Score=81.46  Aligned_cols=48  Identities=10%  Similarity=0.205  Sum_probs=39.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      .+++||+.++++.|++ |++++++||.++..   ....|+++|+..|...+.
T Consensus        83 ~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~---~~~~l~~~gl~~~f~~i~  130 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSS-SYPLYITTTKDTST---AQDMAKNLEIHHFFDGIY  130 (210)
T ss_dssp             CEECTTHHHHHHHHHT-TSCEEEEEEEEHHH---HHHHHHHTTCGGGCSEEE
T ss_pred             CCCCCCHHHHHHHHHc-CCeEEEEeCCCHHH---HHHHHHhcCchhheeeee
Confidence            5788999999999999 99999999987653   446788999988754433

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=98.71  E-value=4.1e-08  Score=79.33  Aligned_cols=51  Identities=16%  Similarity=0.189  Sum_probs=40.6

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ....+.||+.++++.|+++|++++++|+.+...   ....++..|+..+...+.
T Consensus       101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~l~~~f~~~~  151 (237)
T 4ex6_A          101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKA---ARAIAELTGLDTRLTVIA  151 (237)
T ss_dssp             GGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHH---HHHHHHHHTGGGTCSEEE
T ss_pred             cCCccCCCHHHHHHHHHhCCCcEEEEcCCChHH---HHHHHHHcCchhheeeEE
Confidence            456789999999999999999999999988753   446777788876544443

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=98.71  E-value=5.2e-08  Score=80.90  Aligned_cols=48  Identities=21%  Similarity=0.178  Sum_probs=38.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..+++||+.++++.|+++|++++++|++..     ....|++.|+..|...+.
T Consensus       114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~-----~~~~L~~~gl~~~Fd~i~  161 (250)
T 4gib_A          114 SNDILPGIESLLIDVKSNNIKIGLSSASKN-----AINVLNHLGISDKFDFIA  161 (250)
T ss_dssp             GGGSCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHHHTCGGGCSEEC
T ss_pred             ccccchhHHHHHHHHHhcccccccccccch-----hhhHhhhcccccccceee
Confidence            346899999999999999999999888754     235688889988765543

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=98.70  E-value=1.4e-08  Score=84.97  Aligned_cols=62  Identities=18%  Similarity=0.295  Sum_probs=52.3

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+|||||||+++.                           ..+|++.+.+++++++|++++++|||+.........
T Consensus         4 ~~kli~~DlDGTLl~~~---------------------------~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~   56 (264)
T 3epr_A            4 AYKGYLIDLDGTIYKGK---------------------------SRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQE   56 (264)
T ss_dssp             CCCEEEECCBTTTEETT---------------------------EECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHH
T ss_pred             CCCEEEEeCCCceEeCC---------------------------EECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHH
Confidence            46899999999999751                           345999999999999999999999777666666778


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .|+..|+..
T Consensus        57 ~l~~lg~~~   65 (264)
T 3epr_A           57 MLRGFNVET   65 (264)
T ss_dssp             HHHTTTCCC
T ss_pred             HHHHCCCCC
Confidence            889999864

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.69  E-value=6.8e-08  Score=78.22  Aligned_cols=43  Identities=16%  Similarity=0.045  Sum_probs=36.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      .+.||+.++++.|+++|++++++||++...   +...++.+|+..+
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~---~~~~~~~~g~~~~  134 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFV---TAPIARAFGVQHL  134 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHTTCCEE
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHcCCCEE
Confidence            569999999999999999999999998753   4467888898743

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.68  E-value=7.4e-08  Score=77.73  Aligned_cols=47  Identities=19%  Similarity=0.259  Sum_probs=38.9

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ..++.||+.++++.|+++|++++++|+++..   .+...|+..|+..+..
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~~f~  139 (232)
T 1zrn_A           93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQ---SIDAVVSHAGLRDGFD  139 (232)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHTTCGGGCS
T ss_pred             cCCCCccHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHhcChHhhhh
Confidence            3578899999999999999999999999865   3446788889877543

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=98.67  E-value=6.5e-08  Score=79.75  Aligned_cols=49  Identities=14%  Similarity=0.126  Sum_probs=39.9

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..++.||+.++++.|+++|++++++|+.+..   .+...|++.|+..+...+
T Consensus       112 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~gl~~~f~~~  160 (243)
T 2hsz_A          112 ISRLYPNVKETLEALKAQGYILAVVTNKPTK---HVQPILTAFGIDHLFSEM  160 (243)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHTTCGGGCSEE
T ss_pred             cCccCCCHHHHHHHHHHCCCEEEEEECCcHH---HHHHHHHHcCchheEEEE
Confidence            4578899999999999999999999999865   345678888987654433

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=98.67  E-value=3.7e-08  Score=78.54  Aligned_cols=87  Identities=17%  Similarity=0.196  Sum_probs=59.3

Q ss_pred             CCceEEEecCCCCCCChhhHhhh-cCCC---------C----CCC----------------HHHHHHHHHhcCCCCChhH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAH-GFGS---------E----IFN----------------EDAFDEWVDLAKAPALPAS  158 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~-~~g~---------~----~~~----------------~~~~~~wv~~~~~~~~pg~  158 (212)
                      ..++|+||+||||+++.....-. .++.         .    ..+                .+...++.  ...++.||+
T Consensus         3 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   80 (217)
T 3m1y_A            3 LQKLAVFDFDSTLVNAETIESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLKNMPLKLAKEVC--ESLPLFEGA   80 (217)
T ss_dssp             CCEEEEEECBTTTBSSCHHHHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTTTTCBHHHHHHHH--TTCCBCBTH
T ss_pred             CCcEEEEeCCCCCCCchhHHHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHhcCCCHHHHHHHH--hcCcCCCCH
Confidence            46899999999999976543311 1110         0    001                11222222  346899999


Q ss_pred             HHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          159 LTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       159 lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      .++++.|+++|++++++||.+..   .....+++.|+..+..
T Consensus        81 ~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~~gl~~~f~  119 (217)
T 3m1y_A           81 LELVSALKEKNYKVVCFSGGFDL---ATNHYRDLLHLDAAFS  119 (217)
T ss_dssp             HHHHHHHHTTTEEEEEEEEEEHH---HHHHHHHHHTCSEEEE
T ss_pred             HHHHHHHHHCCCEEEEEcCCchh---HHHHHHHHcCcchhcc
Confidence            99999999999999999998765   3446778889987643

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=98.67  E-value=1e-07  Score=76.20  Aligned_cols=50  Identities=12%  Similarity=0.171  Sum_probs=40.9

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ...+.||+.++++.|+++|++++++|+.+..   .+...++..|+..+...+.
T Consensus        84 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~~~  133 (226)
T 3mc1_A           84 ENKVYDGIEALLSSLKDYGFHLVVATSKPTV---FSKQILEHFKLAFYFDAIV  133 (226)
T ss_dssp             SCCBCTTHHHHHHHHHHHTCEEEEEEEEEHH---HHHHHHHHTTCGGGCSEEE
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHhCCHhheeeee
Confidence            3689999999999999999999999998764   4457888899987654433

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.67  E-value=5.3e-08  Score=83.14  Aligned_cols=122  Identities=16%  Similarity=0.132  Sum_probs=81.6

Q ss_pred             CCchhhHHHHhhccCccccccHHHHHHHHHHHHhhc-----cccCCCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHH
Q 028215           67 VPSRCVEFVQKYMTGEHYLSDSEIVSGYSLKHAKSA-----NVSAGDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNED  141 (212)
Q Consensus        67 vP~~C~~~v~~y~~~~~Y~~D~~~v~~~A~~y~~~~-----~~~~~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~  141 (212)
                      -|++|..++...-  +.. .+.+.+..+...|.+..     ... ...++.+++|+|||+.+...        ..+|+  
T Consensus       115 ~~e~~~~R~~~R~--~~~-~~~e~i~~~~~~~~~~~~~~~~~~~-~~~~~~i~iD~dgtl~~~~~--------~~~~~--  180 (301)
T 1ltq_A          115 PWTELVKRNSKRG--TKA-VPIDVLRSMYKSMREYLGLPVYNGT-PGKPKAVIFDVDGTLAKMNG--------RGPYD--  180 (301)
T ss_dssp             CHHHHHHHHHHCG--GGC-CCHHHHHHHHHHHHHHHTCCCCCCC-TTSCEEEEEETBTTTBCCSS--------CCTTC--
T ss_pred             CHHHHHHHHHhcc--CCC-CCHHHHHHHHHHHhcccCCcceecc-ccccceEEEeCCCCcccccC--------CCchh--
Confidence            3456666665421  121 23455555555554321     122 23457899999999887532        11222  


Q ss_pred             HHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHH--------CCCCCCCeEEeecCC
Q 028215          142 AFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF--------AGYSDWKKLFLRYRN  207 (212)
Q Consensus       142 ~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~--------~G~~~~~~Lilr~~~  207 (212)
                          |......+++||+.++|+.|+++|++++++|||++...+.+.++|++        +|++ ++.++++++.
T Consensus       181 ----~~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~  249 (301)
T 1ltq_A          181 ----LEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP-LVMQCQREQG  249 (301)
T ss_dssp             ----GGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC-CSEEEECCTT
T ss_pred             ----hhhccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC-chheeeccCC
Confidence                23445678999999999999999999999999998776667788888        8995 7888887654

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=98.66  E-value=1e-07  Score=78.09  Aligned_cols=49  Identities=16%  Similarity=0.195  Sum_probs=38.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..+++||+.++++.|+++|++++++||.++.   .+...|++.|+..++.++
T Consensus       108 ~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~f~~~~  156 (240)
T 2hi0_A          108 KTGPFPGILDLMKNLRQKGVKLAVVSNKPNE---AVQVLVEELFPGSFDFAL  156 (240)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHHSTTTCSEEE
T ss_pred             cCCcCCCHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHcCCcceeEEE
Confidence            4578999999999999999999999998764   344677788877234444

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=98.63  E-value=1.7e-07  Score=75.41  Aligned_cols=45  Identities=22%  Similarity=0.087  Sum_probs=37.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ++.||+.++++.|+++|++++++|+.+.     +...|+..|+..+...+
T Consensus        92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-----~~~~l~~~gl~~~f~~i  136 (233)
T 3nas_A           92 DLLPGIGRLLCQLKNENIKIGLASSSRN-----APKILRRLAIIDDFHAI  136 (233)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHHTTCTTTCSEE
T ss_pred             CcCcCHHHHHHHHHHCCCcEEEEcCchh-----HHHHHHHcCcHhhcCEE
Confidence            3799999999999999999999999854     44678889988765443

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=98.63  E-value=1e-07  Score=76.31  Aligned_cols=48  Identities=10%  Similarity=0.139  Sum_probs=39.3

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ...++.|++.++++.|+++|++++++|+.+...   ....|+..|+..+..
T Consensus        93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~l~~~f~  140 (230)
T 3um9_A           93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHS---IRQVVGNSGLTNSFD  140 (230)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHHTCGGGCS
T ss_pred             hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHH---HHHHHHHCCChhhcc
Confidence            356889999999999999999999999998653   446777888876543

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=98.63  E-value=2.2e-07  Score=72.87  Aligned_cols=47  Identities=17%  Similarity=0.180  Sum_probs=39.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ++.|++.++++.|+++|++++++|+.+..   .....++..|+..+...+
T Consensus        89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~  135 (214)
T 3e58_A           89 LIFPDVLKVLNEVKSQGLEIGLASSSVKA---DIFRALEENRLQGFFDIV  135 (214)
T ss_dssp             HBCTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHTTCGGGCSEE
T ss_pred             CcCchHHHHHHHHHHCCCCEEEEeCCcHH---HHHHHHHHcCcHhheeeE
Confidence            68999999999999999999999999765   344778889998764433

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=98.63  E-value=1.9e-07  Score=75.46  Aligned_cols=45  Identities=20%  Similarity=0.319  Sum_probs=35.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ..++.||+.++++.|+++|++++++|+.+.....   ..|+. |+..+.
T Consensus       106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~---~~l~~-~l~~~f  150 (247)
T 3dv9_A          106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLL---DRLNH-NFPGIF  150 (247)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CH---HHHHH-HSTTTC
T ss_pred             cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHH---HHHHh-hHHHhc
Confidence            4688999999999999999999999998865433   56777 887664

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=98.62  E-value=1.2e-07  Score=75.97  Aligned_cols=49  Identities=20%  Similarity=0.108  Sum_probs=40.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ...+.|++.++++.|+++|++++++|+.+..   .....|+..|+..+...+
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~  137 (233)
T 3s6j_A           89 QIIALPGAVELLETLDKENLKWCIATSGGID---TATINLKALKLDINKINI  137 (233)
T ss_dssp             GCEECTTHHHHHHHHHHTTCCEEEECSSCHH---HHHHHHHTTTCCTTSSCE
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCchh---hHHHHHHhcchhhhhhee
Confidence            3688999999999999999999999999764   344678888998764333

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.62  E-value=6.4e-08  Score=84.64  Aligned_cols=88  Identities=16%  Similarity=0.137  Sum_probs=62.0

Q ss_pred             CCCCceEEEecCCCCCCChhhHhh-hcCCC---------------C--------------CCCHHHHHHHHHhcCCCCCh
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAA-HGFGS---------------E--------------IFNEDAFDEWVDLAKAPALP  156 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~-~~~g~---------------~--------------~~~~~~~~~wv~~~~~~~~p  156 (212)
                      ...+++|+||+||||+++.+.... ..+|.               .              ....+.+.++.  ...++.|
T Consensus       105 ~~~~kaviFDlDGTLid~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i~~~~--~~~~l~p  182 (317)
T 4eze_A          105 LPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVC--DRMTLSP  182 (317)
T ss_dssp             CCCSCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHH--HTCCBCT
T ss_pred             CCCCCEEEEcCCCCccCCccHHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHH--hCCEECc
Confidence            346889999999999998754221 11111               0              11122333333  2568999


Q ss_pred             hHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          157 ASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       157 g~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      |+.++++.|+++|++++++||.+..   .+...+++.|+..+.
T Consensus       183 g~~e~L~~Lk~~G~~v~IvSn~~~~---~~~~~l~~lgl~~~f  222 (317)
T 4eze_A          183 GLLTILPVIKAKGFKTAIISGGLDI---FTQRLKARYQLDYAF  222 (317)
T ss_dssp             THHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHHTCSEEE
T ss_pred             CHHHHHHHHHhCCCEEEEEeCccHH---HHHHHHHHcCCCeEE
Confidence            9999999999999999999998764   455788888998654

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=98.61  E-value=4.5e-08  Score=81.56  Aligned_cols=62  Identities=21%  Similarity=0.335  Sum_probs=51.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+||+||||+++.                           .+.|++.+.+++|+++|++++++|||+........+
T Consensus        16 ~~~~v~~DlDGTLl~~~---------------------------~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~   68 (271)
T 1vjr_A           16 KIELFILDMDGTFYLDD---------------------------SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVR   68 (271)
T ss_dssp             GCCEEEECCBTTTEETT---------------------------EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHH
T ss_pred             CCCEEEEcCcCcEEeCC---------------------------EECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHH
Confidence            57899999999999861                           456889999999999999999999665555556667


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .++..|++.
T Consensus        69 ~~~~lg~~~   77 (271)
T 1vjr_A           69 KLRNMGVDV   77 (271)
T ss_dssp             HHHHTTCCC
T ss_pred             HHHHcCCCC
Confidence            888888864

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=98.61  E-value=6.5e-08  Score=81.96  Aligned_cols=62  Identities=23%  Similarity=0.150  Sum_probs=49.2

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      ..++.|+|||||||+++..                          ...+.+.+.+++++++|++++++|||+.....   
T Consensus        19 ~~~kli~~DlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~---   69 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSPDH--------------------------FLTPYAKETLKLLTARGINFVFATGRHYIDVG---   69 (285)
T ss_dssp             --CCEEEEECCCCCSCTTS--------------------------CCCHHHHHHHHHHHTTTCEEEEECSSCGGGGH---
T ss_pred             CcceEEEEeCcCCCCCCCC--------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH---
Confidence            4688999999999998621                          46678899999999999999999999986544   


Q ss_pred             HHHHHCCCCCC
Q 028215          188 KNLLFAGYSDW  198 (212)
Q Consensus       188 ~nL~~~G~~~~  198 (212)
                      ..++..|++.+
T Consensus        70 ~~~~~l~~~~~   80 (285)
T 3pgv_A           70 QIRDNLGIRSY   80 (285)
T ss_dssp             HHHHHHCSCCE
T ss_pred             HHHHhcCCCcc
Confidence            45566677643

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=98.60  E-value=1.9e-07  Score=76.14  Aligned_cols=45  Identities=16%  Similarity=0.338  Sum_probs=37.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ...+.||+.++++.|+++|++++++|+.+...   ....|+. |+..+.
T Consensus       107 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~l~~-~l~~~f  151 (243)
T 3qxg_A          107 EAERMPGAWELLQKVKSEGLTPMVVTGSGQLS---LLERLEH-NFPGMF  151 (243)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEECCCCCHH---HHTTHHH-HSTTTC
T ss_pred             cCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHH---HHHHHHH-hHHHhc
Confidence            46889999999999999999999999988643   3356777 887765

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=98.60  E-value=3.1e-07  Score=71.62  Aligned_cols=47  Identities=13%  Similarity=0.159  Sum_probs=38.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..+.|++.++++.|+++|++++++|+.+.    .+...++..|+..+...+
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~----~~~~~l~~~~~~~~f~~~  127 (190)
T 2fi1_A           81 PILFEGVSDLLEDISNQGGRHFLVSHRND----QVLEILEKTSIAAYFTEV  127 (190)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCT----HHHHHHHHTTCGGGEEEE
T ss_pred             CccCcCHHHHHHHHHHCCCcEEEEECCcH----HHHHHHHHcCCHhheeee
Confidence            34899999999999999999999999864    245678888987764433

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.60  E-value=1e-07  Score=75.85  Aligned_cols=82  Identities=20%  Similarity=0.374  Sum_probs=57.9

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh-----
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF-----  181 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~-----  181 (212)
                      +.+.++++||+||||+.+.+.    .|...           .....++.||+.++|+.|+++|++++++||.+..     
T Consensus        11 ~~~~k~~~~D~Dgtl~~~~~~----~~~~~-----------~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~   75 (176)
T 2fpr_A           11 GSSQKYLFIDRDGTLISEPPS----DFQVD-----------RFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSF   75 (176)
T ss_dssp             --CCEEEEECSBTTTBCCC------CCCCC-----------SGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTB
T ss_pred             CCcCcEEEEeCCCCeEcCCCC----CcCcC-----------CHHHCcCCccHHHHHHHHHHCCCEEEEEECCcccccccc
Confidence            568999999999999987420    01000           0123578999999999999999999999998421     


Q ss_pred             -------chHHHHHHHHHCCCCCCCeEEee
Q 028215          182 -------QRNTTEKNLLFAGYSDWKKLFLR  204 (212)
Q Consensus       182 -------~~~~T~~nL~~~G~~~~~~Lilr  204 (212)
                             ........|+..|+. ++.++..
T Consensus        76 ~~~~~~~~~~~~~~~l~~~gl~-fd~v~~s  104 (176)
T 2fpr_A           76 PQADFDGPHNLMMQIFTSQGVQ-FDEVLIC  104 (176)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCC-EEEEEEE
T ss_pred             chHhhhhhHHHHHHHHHHcCCC-eeEEEEc
Confidence                   234556788899998 6666553

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=98.60  E-value=1.4e-07  Score=76.58  Aligned_cols=48  Identities=21%  Similarity=0.224  Sum_probs=39.5

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ...++.||+.++++.|+++|++++++||.+..   .+...++..|+..+..
T Consensus        80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~gl~~~f~  127 (222)
T 2nyv_A           80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEE---LSKKILDILNLSGYFD  127 (222)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHTTCGGGCS
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHH---HHHHHHHHcCCHHHhe
Confidence            34678999999999999999999999998764   3446788899876543

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=98.59  E-value=4.6e-08  Score=81.93  Aligned_cols=61  Identities=25%  Similarity=0.291  Sum_probs=52.2

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .++++|||||||++..                           .++|++.+.+++|+++|++++++|||+........+.
T Consensus         1 ik~i~~D~DGtL~~~~---------------------------~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~   53 (263)
T 1zjj_A            1 MVAIIFDMDGVLYRGN---------------------------RAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREK   53 (263)
T ss_dssp             CEEEEEECBTTTEETT---------------------------EECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHH
T ss_pred             CeEEEEeCcCceEeCC---------------------------EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence            3689999999999741                           3458999999999999999999999998777777888


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      |++.|++.
T Consensus        54 l~~lg~~~   61 (263)
T 1zjj_A           54 LLKMGIDV   61 (263)
T ss_dssp             HHTTTCCC
T ss_pred             HHHCCCCC
Confidence            88889873

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=98.59  E-value=1e-07  Score=76.56  Aligned_cols=49  Identities=20%  Similarity=0.291  Sum_probs=40.2

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..++.||+.++++.|+++|++++++|+.+...   ....|+..|+..+...+
T Consensus        97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~l~~~~l~~~f~~~  145 (233)
T 3umb_A           97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQM---LEIAVKSAGMSGLFDHV  145 (233)
T ss_dssp             SCEECTTHHHHHHHHHTTTCCEEEEESSCHHH---HHHHHHTTTCTTTCSEE
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHH---HHHHHHHCCcHhhcCEE
Confidence            46789999999999999999999999998753   44678888988764433

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=98.58  E-value=1.7e-07  Score=75.50  Aligned_cols=48  Identities=6%  Similarity=0.123  Sum_probs=39.9

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ....+.||+.++++.|+++|++++++|+.+..   .+...++..|+..+..
T Consensus       100 ~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~---~~~~~l~~~gl~~~f~  147 (231)
T 3kzx_A          100 DNFMLNDGAIELLDTLKENNITMAIVSNKNGE---RLRSEIHHKNLTHYFD  147 (231)
T ss_dssp             CCCEECTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHTTCGGGCS
T ss_pred             ccceECcCHHHHHHHHHHCCCeEEEEECCCHH---HHHHHHHHCCchhhee
Confidence            35678999999999999999999999998764   4457888899887543

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.57  E-value=2.4e-08  Score=77.48  Aligned_cols=71  Identities=21%  Similarity=0.241  Sum_probs=51.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++++||+||||+++..++....                .......|++.++++.|+++|++++++||++...   +..
T Consensus         8 ~~k~v~~DlDGTL~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~---~~~   68 (162)
T 2p9j_A            8 KLKLLIMDIDGVLTDGKLYYTEHG----------------ETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAP---LIT   68 (162)
T ss_dssp             HCCEEEECCTTTTSCSEEEEETTE----------------EEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHH---HHH
T ss_pred             ceeEEEEecCcceECCceeecCCC----------------ceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHH---HHH
Confidence            367999999999998644321100                0001345778999999999999999999998753   446


Q ss_pred             HHHHCCCCCC
Q 028215          189 NLLFAGYSDW  198 (212)
Q Consensus       189 nL~~~G~~~~  198 (212)
                      .+++.|+..+
T Consensus        69 ~l~~~gl~~~   78 (162)
T 2p9j_A           69 RLKELGVEEI   78 (162)
T ss_dssp             HHHHTTCCEE
T ss_pred             HHHHcCCHhh
Confidence            7778887643

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=98.55  E-value=5.9e-07  Score=75.16  Aligned_cols=50  Identities=18%  Similarity=0.125  Sum_probs=40.5

Q ss_pred             CCCCChhHHHHHHHHHHCCC--eEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGF--KIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~--kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..++.||+.++++.|+++|+  +++++||.+...   ....++..|+..+...+.
T Consensus       140 ~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~---~~~~l~~~gl~~~fd~v~  191 (282)
T 3nuq_A          140 ILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNH---AIRCLRLLGIADLFDGLT  191 (282)
T ss_dssp             TCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHH---HHHHHHHHTCTTSCSEEE
T ss_pred             ccCcChhHHHHHHHHHhCCCCceEEEEECCChHH---HHHHHHhCCcccccceEE
Confidence            36789999999999999999  999999998653   346777889887654443

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.55  E-value=4.7e-08  Score=79.44  Aligned_cols=62  Identities=19%  Similarity=0.122  Sum_probs=44.1

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ  182 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~  182 (212)
                      ...++|+||+||||+|- .+...    ...+.        .....+++||+.++|+.|+++|++++++||+++..
T Consensus         4 ~~~kav~fDlDGTL~d~-~~~~~----~~~~~--------~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~   65 (196)
T 2oda_A            4 PTFPALLFGLSGCLVDF-GAQAA----TSDTP--------DDEHAQLTPGAQNALKALRDQGMPCAWIDELPEAL   65 (196)
T ss_dssp             -CCSCEEEETBTTTBCT-TSTTT----SCSSC--------CGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHH
T ss_pred             CcCCEEEEcCCCceEec-ccccc----chhhc--------ccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHH
Confidence            35789999999999972 11000    00000        11234789999999999999999999999998754

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=98.55  E-value=1.2e-07  Score=75.62  Aligned_cols=45  Identities=13%  Similarity=0.205  Sum_probs=38.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ..++.||+.++++.|+++ ++++++||.+..   .+...++++|+..+.
T Consensus        67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~---~~~~~l~~~gl~~~f  111 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYE---FSQPLMRQLGFPTLL  111 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHH---HHHHHHHHTTCCCEE
T ss_pred             hcCCCccHHHHHHHHHhc-CcEEEEECChHH---HHHHHHHHcCCccee
Confidence            568899999999999999 999999998764   445788889998754

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=98.55  E-value=8.9e-08  Score=80.81  Aligned_cols=61  Identities=16%  Similarity=0.125  Sum_probs=52.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+||+||||+++.                           .++|++.+.+++++++|++++++||++........+
T Consensus        13 ~~k~i~~D~DGtL~~~~---------------------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~   65 (284)
T 2hx1_A           13 KYKCIFFDAFGVLKTYN---------------------------GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLAD   65 (284)
T ss_dssp             GCSEEEECSBTTTEETT---------------------------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHH
T ss_pred             cCCEEEEcCcCCcCcCC---------------------------eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHH
Confidence            47899999999999751                           467899999999999999999999966555566778


Q ss_pred             HHHHCCCC
Q 028215          189 NLLFAGYS  196 (212)
Q Consensus       189 nL~~~G~~  196 (212)
                      .++..|++
T Consensus        66 ~l~~lg~~   73 (284)
T 2hx1_A           66 SYHKLGLF   73 (284)
T ss_dssp             HHHHTTCT
T ss_pred             HHHHCCcC
Confidence            89999997

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.54  E-value=1.7e-07  Score=78.49  Aligned_cols=59  Identities=15%  Similarity=0.145  Sum_probs=48.0

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+||+||||+++..                          ...+.+.+.+++++++|++++++|||+....   ..
T Consensus         4 ~~kli~fDlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~   54 (279)
T 4dw8_A            4 KYKLIVLDLDGTLTNSKK--------------------------EISSRNRETLIRIQEQGIRLVLASGRPTYGI---VP   54 (279)
T ss_dssp             CCCEEEECCCCCCSCTTS--------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HH
T ss_pred             cceEEEEeCCCCCCCCCC--------------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChHHH---HH
Confidence            368999999999998731                          4568889999999999999999999997543   35


Q ss_pred             HHHHCCCC
Q 028215          189 NLLFAGYS  196 (212)
Q Consensus       189 nL~~~G~~  196 (212)
                      .+...|++
T Consensus        55 ~~~~l~~~   62 (279)
T 4dw8_A           55 LANELRMN   62 (279)
T ss_dssp             HHHHTTGG
T ss_pred             HHHHhCCC
Confidence            66777763

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.53  E-value=1.4e-07  Score=77.77  Aligned_cols=59  Identities=24%  Similarity=0.238  Sum_probs=46.7

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .++++||+||||+++..                          ...+.+.+.+++++++|++++++|||+.....   ..
T Consensus         3 ~kli~~DlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~---~~   53 (231)
T 1wr8_A            3 IKAISIDIDGTITYPNR--------------------------MIHEKALEAIRRAESLGIPIMLVTGNTVQFAE---AA   53 (231)
T ss_dssp             CCEEEEESTTTTBCTTS--------------------------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHH---HH
T ss_pred             eeEEEEECCCCCCCCCC--------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHH---HH
Confidence            47899999999998621                          45688899999999999999999999975433   34


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      ++..|++.
T Consensus        54 ~~~l~~~~   61 (231)
T 1wr8_A           54 SILIGTSG   61 (231)
T ss_dssp             HHHHTCCS
T ss_pred             HHHcCCCC
Confidence            45567664

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=98.53  E-value=2.2e-07  Score=76.34  Aligned_cols=62  Identities=16%  Similarity=0.163  Sum_probs=50.4

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+||+||||+++.                           ..++++.+.++.++++|++++++|++.........+
T Consensus         6 ~ik~i~fDlDGTLld~~---------------------------~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~   58 (259)
T 2ho4_A            6 ALKAVLVDLNGTLHIED---------------------------AAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLE   58 (259)
T ss_dssp             CCCEEEEESSSSSCC------------------------------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHH
T ss_pred             hCCEEEEeCcCcEEeCC---------------------------EeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHH
Confidence            47899999999999862                           355788899999999999999999887666666777


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .|...|++.
T Consensus        59 ~l~~~g~~~   67 (259)
T 2ho4_A           59 RLKKLEFEI   67 (259)
T ss_dssp             HHHHTTCCC
T ss_pred             HHHHcCCCc
Confidence            888888863

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=98.53  E-value=2.5e-07  Score=75.07  Aligned_cols=50  Identities=12%  Similarity=0.097  Sum_probs=40.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..++.||+.++++.|+++|++++++|+.+..   .+...|+..|+..+...+.
T Consensus       108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~  157 (240)
T 3sd7_A          108 ENKIYENMKEILEMLYKNGKILLVATSKPTV---FAETILRYFDIDRYFKYIA  157 (240)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHTTCGGGCSEEE
T ss_pred             ccccCccHHHHHHHHHHCCCeEEEEeCCcHH---HHHHHHHHcCcHhhEEEEE
Confidence            4679999999999999999999999998654   4457888899987644333

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.53  E-value=1.7e-07  Score=78.86  Aligned_cols=59  Identities=20%  Similarity=0.146  Sum_probs=48.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+||+||||+++.+                          ...+.+.+.+++++++|++++++|||+....   ..
T Consensus         5 ~~kli~fDlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~   55 (290)
T 3dnp_A            5 SKQLLALNIDGALLRSNG--------------------------KIHQATKDAIEYVKKKGIYVTLVTNRHFRSA---QK   55 (290)
T ss_dssp             -CCEEEECCCCCCSCTTS--------------------------CCCHHHHHHHHHHHHTTCEEEEBCSSCHHHH---HH
T ss_pred             cceEEEEcCCCCCCCCCC--------------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHH---HH
Confidence            368999999999998731                          4567889999999999999999999997543   35


Q ss_pred             HHHHCCCC
Q 028215          189 NLLFAGYS  196 (212)
Q Consensus       189 nL~~~G~~  196 (212)
                      .+...|++
T Consensus        56 ~~~~~~~~   63 (290)
T 3dnp_A           56 IAKSLKLD   63 (290)
T ss_dssp             HHHHTTCC
T ss_pred             HHHHcCCC
Confidence            66677876

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=98.52  E-value=3.2e-07  Score=72.34  Aligned_cols=43  Identities=14%  Similarity=0.196  Sum_probs=36.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      ...+.||+.++++.|+++|++++++||.+...   +...++..|+.
T Consensus        80 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~~~~~~~~  122 (219)
T 3kd3_A           80 PNLLTDGIKELVQDLKNKGFEIWIFSGGLSES---IQPFADYLNIP  122 (219)
T ss_dssp             TTTBCTTHHHHHHHHHHTTCEEEEEEEEEHHH---HHHHHHHHTCC
T ss_pred             cccCChhHHHHHHHHHHCCCeEEEEcCCcHHH---HHHHHHHcCCC
Confidence            35689999999999999999999999987653   44677788886

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=98.52  E-value=3.1e-07  Score=72.45  Aligned_cols=45  Identities=16%  Similarity=0.254  Sum_probs=36.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ..++.||+.++++.|+++| +++++|+.+...   ....++..|+..+.
T Consensus        84 ~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~---~~~~l~~~~~~~~f  128 (200)
T 3cnh_A           84 QSQPRPEVLALARDLGQRY-RMYSLNNEGRDL---NEYRIRTFGLGEFL  128 (200)
T ss_dssp             TCCBCHHHHHHHHHHTTTS-EEEEEECCCHHH---HHHHHHHHTGGGTC
T ss_pred             cCccCccHHHHHHHHHHcC-CEEEEeCCcHHH---HHHHHHhCCHHHhc
Confidence            4568999999999999999 999999998753   34567777877653

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.51  E-value=1.4e-07  Score=79.05  Aligned_cols=59  Identities=25%  Similarity=0.230  Sum_probs=40.4

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .++|+||+||||+++.+                          ...+.+.+.+++++++|++++++|||+...   ....
T Consensus         5 ~kli~~DlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~---~~~~   55 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKN--------------------------ELAQATIDAVQAAKAQGIKVVLCTGRPLTG---VQPY   55 (279)
T ss_dssp             CCEEEECC-------------------------------------CHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHH
T ss_pred             eEEEEEcCcCCCCCCCC--------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHH
Confidence            68999999999998732                          456788999999999999999999999753   3456


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      +...|++.
T Consensus        56 ~~~l~~~~   63 (279)
T 3mpo_A           56 LDAMDIDG   63 (279)
T ss_dssp             HHHTTCCS
T ss_pred             HHHcCCCC
Confidence            77788764

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=98.51  E-value=3.8e-07  Score=75.10  Aligned_cols=45  Identities=18%  Similarity=0.143  Sum_probs=36.9

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ..++.||+.++++.|+  |++++++||++...   ....|+.+|+..+..
T Consensus        91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~---~~~~l~~~gl~~~f~  135 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDM---LQALVANAGLTDSFD  135 (253)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHH---HHHHHHHTTCGGGCS
T ss_pred             cCCCCccHHHHHHHHc--CCCEEEEeCcCHHH---HHHHHHHCCchhhcc
Confidence            4578999999999999  99999999998753   446788889877643

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.50  E-value=5.5e-07  Score=71.53  Aligned_cols=47  Identities=26%  Similarity=0.350  Sum_probs=38.1

Q ss_pred             CCCCChhHHHHHHHHHHCC-CeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQLG-FKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G-~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ...+.||+.++++.|+++| ++++++|+.+...   ....++..|+..+..
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~---~~~~l~~~~~~~~f~  150 (234)
T 3ddh_A          103 PIELLPGVKETLKTLKETGKYKLVVATKGDLLD---QENKLERSGLSPYFD  150 (234)
T ss_dssp             CCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHH---HHHHHHHHTCGGGCS
T ss_pred             cCCcCccHHHHHHHHHhCCCeEEEEEeCCchHH---HHHHHHHhCcHhhhh
Confidence            4688999999999999999 9999999887643   346777788876543

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.50  E-value=2.1e-07  Score=77.31  Aligned_cols=58  Identities=28%  Similarity=0.326  Sum_probs=45.5

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      +++|+|||||||+++.+                          ...+.+.+.+++++++|++++++|||+.....   ..
T Consensus         3 ~kli~~DlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~---~~   53 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQK--------------------------QLPLSTIEAVRRLKQSGVYVAIATGRAPFMFE---HV   53 (258)
T ss_dssp             CCEEEECTBTTTBCTTS--------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCGGGSH---HH
T ss_pred             ceEEEEeCCCCCcCCCC--------------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHHH---HH
Confidence            57999999999998631                          35678899999999999999999999976443   33


Q ss_pred             HHHCCCC
Q 028215          190 LLFAGYS  196 (212)
Q Consensus       190 L~~~G~~  196 (212)
                      +...|+.
T Consensus        54 ~~~l~~~   60 (258)
T 2pq0_A           54 RKQLGID   60 (258)
T ss_dssp             HHHHTCC
T ss_pred             HHhcCCC
Confidence            4444654

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=98.48  E-value=1.8e-07  Score=80.12  Aligned_cols=61  Identities=16%  Similarity=0.276  Sum_probs=52.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+||+||||+++.                           .++|++.+.++.|+++|++++++|||+...+....+
T Consensus        20 ~~k~i~~D~DGTL~~~~---------------------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~   72 (306)
T 2oyc_A           20 RAQGVLFDCDGVLWNGE---------------------------RAVPGAPELLERLARAGKAALFVSNNSRRARPELAL   72 (306)
T ss_dssp             HCSEEEECSBTTTEETT---------------------------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHH
T ss_pred             hCCEEEECCCCcEecCC---------------------------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHH
Confidence            46799999999999751                           467899999999999999999999877666667778


Q ss_pred             HHHHCCCC
Q 028215          189 NLLFAGYS  196 (212)
Q Consensus       189 nL~~~G~~  196 (212)
                      .|++.|+.
T Consensus        73 ~~~~~g~~   80 (306)
T 2oyc_A           73 RFARLGFG   80 (306)
T ss_dssp             HHHHTTCC
T ss_pred             HHHhcCCC
Confidence            89999987

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.48  E-value=1.7e-07  Score=77.85  Aligned_cols=58  Identities=17%  Similarity=0.159  Sum_probs=46.8

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .++|+||+||||+++.+                          ...+.+.+.+++++++|++++++|||+.....   ..
T Consensus         5 ~kli~fDlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~---~~   55 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEVY--------------------------GIPESAKHAIRLCQKNHCSVVICTGRSMGTIQ---DD   55 (274)
T ss_dssp             CCEEEECSBTTTBBTTT--------------------------BCCHHHHHHHHHHHHTTCEEEEECSSCTTTSC---HH
T ss_pred             ceEEEEECCCCCCCCCC--------------------------cCCHHHHHHHHHHHHCCCEEEEEeCCChHHHH---HH
Confidence            58999999999998732                          35678889999999999999999999976433   45


Q ss_pred             HHHCCCC
Q 028215          190 LLFAGYS  196 (212)
Q Consensus       190 L~~~G~~  196 (212)
                      +...|+.
T Consensus        56 ~~~~~~~   62 (274)
T 3fzq_A           56 VLSLGVD   62 (274)
T ss_dssp             HHTTCCS
T ss_pred             HHHcCCC
Confidence            5666665

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=98.47  E-value=3.3e-07  Score=77.79  Aligned_cols=59  Identities=22%  Similarity=0.148  Sum_probs=47.5

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.++|||||||+++.                          ..+.|.+.+.+++|+++|++++++|||+.....   ..
T Consensus         5 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~---~~   55 (282)
T 1rkq_A            5 IKLIAIDMDGTLLLPD--------------------------HTISPAVKNAIAAARARGVNVVLTTGRPYAGVH---NY   55 (282)
T ss_dssp             CCEEEECCCCCCSCTT--------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTH---HH
T ss_pred             ceEEEEeCCCCCCCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH---HH
Confidence            5799999999999852                          145678899999999999999999999976433   45


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      ++..|+..
T Consensus        56 ~~~l~l~~   63 (282)
T 1rkq_A           56 LKELHMEQ   63 (282)
T ss_dssp             HHHTTCCS
T ss_pred             HHHhCCCC
Confidence            66777753

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=98.47  E-value=7.3e-07  Score=74.66  Aligned_cols=47  Identities=11%  Similarity=0.165  Sum_probs=38.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKL  201 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~L  201 (212)
                      ..++.||+.++|+.|++ |++++++||.+...   ....|+..|+..|...
T Consensus       119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~---~~~~l~~~gl~~~f~~  165 (260)
T 2gfh_A          119 HMILADDVKAMLTELRK-EVRLLLLTNGDRQT---QREKIEACACQSYFDA  165 (260)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHH---HHHHHHHHTCGGGCSE
T ss_pred             cCCCCcCHHHHHHHHHc-CCcEEEEECcChHH---HHHHHHhcCHHhhhhe
Confidence            56889999999999998 59999999998753   4467888899876543

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=98.46  E-value=1.1e-07  Score=77.03  Aligned_cols=44  Identities=20%  Similarity=0.219  Sum_probs=37.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      .++.||+.++++.|+++|++++++||++..    +...|+..|+..+.
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~----~~~~l~~~gl~~~f  137 (220)
T 2zg6_A           94 AFLYDDTLEFLEGLKSNGYKLALVSNASPR----VKTLLEKFDLKKYF  137 (220)
T ss_dssp             EEECTTHHHHHHHHHTTTCEEEECCSCHHH----HHHHHHHHTCGGGC
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEeCCcHH----HHHHHHhcCcHhHe
Confidence            478999999999999999999999998652    45688888987754

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=98.45  E-value=3.9e-07  Score=72.16  Aligned_cols=46  Identities=22%  Similarity=0.322  Sum_probs=37.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ...+.|++.++++.++++|++++++|+.+...   ....++..|+..+.
T Consensus        87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~~~~~~~~~~~  132 (225)
T 3d6j_A           87 NTILFPDTLPTLTHLKKQGIRIGIISTKYRFR---ILSFLRNHMPDDWF  132 (225)
T ss_dssp             GCEECTTHHHHHHHHHHHTCEEEEECSSCHHH---HHHHHHTSSCTTCC
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEECCCHHH---HHHHHHHcCchhhe
Confidence            45678999999999999999999999987643   44677888887653

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.45  E-value=2.1e-07  Score=75.86  Aligned_cols=76  Identities=16%  Similarity=0.133  Sum_probs=56.2

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc-----
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ-----  182 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~-----  182 (212)
                      ...++++||+||||++...|...                  .....+.||+.+++++|+++|++++++||++...     
T Consensus        29 ~~~k~i~~D~DGtl~~~~~y~~~------------------~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~   90 (218)
T 2o2x_A           29 PHLPALFLDRDGTINVDTDYPSD------------------PAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFG   90 (218)
T ss_dssp             SSCCCEEECSBTTTBCCCSCTTC------------------GGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCC
T ss_pred             hcCCEEEEeCCCCcCCCCcccCC------------------cccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCccccc
Confidence            45789999999999976332111                  1234789999999999999999999999998621     


Q ss_pred             -------hHHHHHHHHHCCCCCCCeEE
Q 028215          183 -------RNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       183 -------~~~T~~nL~~~G~~~~~~Li  202 (212)
                             .......|+++|+. ++..+
T Consensus        91 ~~~~~~~~~~~~~~l~~~gl~-~~~~~  116 (218)
T 2o2x_A           91 WSAFAAVNGRVLELLREEGVF-VDMVL  116 (218)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCC-CSEEE
T ss_pred             HHHHHHHHHHHHHHHHHcCCc-eeeEE
Confidence                   03455678889986 55443

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=98.45  E-value=3.2e-07  Score=77.83  Aligned_cols=60  Identities=13%  Similarity=0.110  Sum_probs=47.0

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +++.|+|||||||+++..                          ...+.+.+.+++|+++|++++++|||+...   ...
T Consensus         8 ~~~li~~DlDGTLl~~~~--------------------------~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~---~~~   58 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDSHS--------------------------YDWQPAAPWLTRLREANVPVILCSSKTSAE---MLY   58 (275)
T ss_dssp             CCEEEEEECTTTTSCSSC--------------------------CSCCTTHHHHHHHHHTTCCEEEECSSCHHH---HHH
T ss_pred             CceEEEEeCCCCCCCCCC--------------------------cCCHHHHHHHHHHHHCCCeEEEEcCCCHHH---HHH
Confidence            467999999999997510                          234567999999999999999999998753   335


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .++..|+..
T Consensus        59 ~~~~l~~~~   67 (275)
T 1xvi_A           59 LQKTLGLQG   67 (275)
T ss_dssp             HHHHTTCTT
T ss_pred             HHHHcCCCC
Confidence            667778764

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=98.44  E-value=3.9e-07  Score=71.75  Aligned_cols=45  Identities=18%  Similarity=0.160  Sum_probs=35.7

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..++.|++.++++.++++|++++++|||+....   ...++..|+..+
T Consensus        74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~---~~~~~~~~~~~~  118 (211)
T 1l7m_A           74 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAV---NKIKEKLGLDYA  118 (211)
T ss_dssp             TCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHH---HHHHHHHTCSEE
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHH---HHHHHHcCCCeE
Confidence            456789999999999999999999999986533   345667777643

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.44  E-value=6e-07  Score=71.92  Aligned_cols=47  Identities=15%  Similarity=0.260  Sum_probs=37.9

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ....+.|++.++++.|+ +|++++++|+.+...   ....|+..|+..+..
T Consensus       104 ~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~---~~~~l~~~~l~~~f~  150 (240)
T 3qnm_A          104 TKSGLMPHAKEVLEYLA-PQYNLYILSNGFREL---QSRKMRSAGVDRYFK  150 (240)
T ss_dssp             GCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHH---HHHHHHHHTCGGGCS
T ss_pred             hcCCcCccHHHHHHHHH-cCCeEEEEeCCchHH---HHHHHHHcChHhhce
Confidence            34688999999999999 999999999987653   346777778876543

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=98.44  E-value=8.8e-07  Score=72.58  Aligned_cols=49  Identities=14%  Similarity=0.271  Sum_probs=38.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC-CeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW-KKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~-~~Lil  203 (212)
                      ...+.||+.++++.|+ +|++++++|+.+...   ....++..|+..+ +.++.
T Consensus       110 ~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~---~~~~l~~~~l~~~f~~i~~  159 (251)
T 2pke_A          110 PVEVIAGVREAVAAIA-ADYAVVLITKGDLFH---QEQKIEQSGLSDLFPRIEV  159 (251)
T ss_dssp             CCCBCTTHHHHHHHHH-TTSEEEEEEESCHHH---HHHHHHHHSGGGTCCCEEE
T ss_pred             cCCcCccHHHHHHHHH-CCCEEEEEeCCCHHH---HHHHHHHcCcHHhCceeee
Confidence            4678999999999999 999999999987643   3467777788765 34443

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=98.44  E-value=2.9e-07  Score=76.48  Aligned_cols=62  Identities=16%  Similarity=0.267  Sum_probs=52.9

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+||+||||+++.                           ..++++.+.++.++++|++++++|||+........+
T Consensus         4 ~~k~v~fDlDGTL~~~~---------------------------~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~   56 (264)
T 1yv9_A            4 DYQGYLIDLDGTIYLGK---------------------------EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQ   56 (264)
T ss_dssp             SCCEEEECCBTTTEETT---------------------------EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHH
T ss_pred             cCCEEEEeCCCeEEeCC---------------------------EECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHH
Confidence            47899999999999862                           346889999999999999999999999877777777


Q ss_pred             HHHH-CCCCC
Q 028215          189 NLLF-AGYSD  197 (212)
Q Consensus       189 nL~~-~G~~~  197 (212)
                      .|.+ .|++.
T Consensus        57 ~l~~~~g~~~   66 (264)
T 1yv9_A           57 RLANEFDIHV   66 (264)
T ss_dssp             HHHHHSCCCC
T ss_pred             HHHHhcCCCC
Confidence            7777 88874

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=98.44  E-value=2.9e-07  Score=76.25  Aligned_cols=44  Identities=30%  Similarity=0.364  Sum_probs=37.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ++.||+.++++.|+++|++++++||++...   +...++..|+..+.
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~---~~~~~~~~gl~~~f  187 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFV---AKWVAEELGLDDYF  187 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCSEEE
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHcCChhHh
Confidence            688999999999999999999999998753   44677888887653

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=98.44  E-value=2e-07  Score=74.12  Aligned_cols=89  Identities=17%  Similarity=0.268  Sum_probs=59.9

Q ss_pred             CceEEEecCCCCCCChhhHhh------hcCCCC---------------------CCCH----HHHHHHHHh-----cCCC
Q 028215          110 KDAWVFDIDETLLSNLPYYAA------HGFGSE---------------------IFNE----DAFDEWVDL-----AKAP  153 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~------~~~g~~---------------------~~~~----~~~~~wv~~-----~~~~  153 (212)
                      .++|+||+||||+++.+.+..      ..+|..                     ..+.    +.+.+|...     ...+
T Consensus         4 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (209)
T 2hdo_A            4 YQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTELGIAASEFDHFQAQYEDVMASHYDQIE   83 (209)
T ss_dssp             CSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHHTTCCGGGHHHHHHHHHHHHTTCGGGCE
T ss_pred             ccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHHHHcCCCHHHHHHHHHHHHHHHhhhcccCC
Confidence            579999999999999875432      112210                     0111    112233321     3467


Q ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          154 ALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       154 ~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      +.||+.++++.|+++ ++++++|+.+..   .+...|++.|+..+...+
T Consensus        84 ~~~~~~~~l~~l~~~-~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~  128 (209)
T 2hdo_A           84 LYPGITSLFEQLPSE-LRLGIVTSQRRN---ELESGMRSYPFMMRMAVT  128 (209)
T ss_dssp             ECTTHHHHHHHSCTT-SEEEEECSSCHH---HHHHHHTTSGGGGGEEEE
T ss_pred             cCCCHHHHHHHHHhc-CcEEEEeCCCHH---HHHHHHHHcChHhhccEE
Confidence            899999999999999 999999998764   344678888887654433

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.44  E-value=7.9e-08  Score=76.49  Aligned_cols=70  Identities=19%  Similarity=0.115  Sum_probs=49.3

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+||+||||+++..++...+                +......+...++++.|+++|++++++|||+...   +..
T Consensus         7 ~ik~i~~DlDGTL~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~---~~~   67 (180)
T 1k1e_A            7 NIKFVITDVDGVLTDGQLHYDANG----------------EAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPI---LRR   67 (180)
T ss_dssp             GCCEEEEECTTTTSCSEEEEETTE----------------EEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHH---HHH
T ss_pred             CCeEEEEeCCCCcCCCCeeeccCc----------------ceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHH---HHH
Confidence            468999999999998743322100                0001234567899999999999999999998753   335


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .++..|+..
T Consensus        68 ~~~~lgl~~   76 (180)
T 1k1e_A           68 RIADLGIKL   76 (180)
T ss_dssp             HHHHHTCCE
T ss_pred             HHHHcCCce
Confidence            667778764

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.43  E-value=1.1e-07  Score=76.63  Aligned_cols=71  Identities=24%  Similarity=0.301  Sum_probs=47.3

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.++|+||+||||+|+..++.........|.              ..++  .+++.|+++|++++++||+++..   +..
T Consensus        18 ~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~--------------~~~~--~~l~~L~~~g~~~~i~T~~~~~~---~~~   78 (189)
T 3mn1_A           18 AIKLAVFDVDGVLTDGRLYFMEDGSEIKTFN--------------TLDG--QGIKMLIASGVTTAIISGRKTAI---VER   78 (189)
T ss_dssp             TCCEEEECSTTTTSCSEEEEETTSCEEEEEE--------------HHHH--HHHHHHHHTTCEEEEECSSCCHH---HHH
T ss_pred             hCCEEEEcCCCCcCCccEeeccCCcEeeeec--------------cccH--HHHHHHHHCCCEEEEEECcChHH---HHH
Confidence            4689999999999998554332110000010              0111  18999999999999999998753   446


Q ss_pred             HHHHCCCCCC
Q 028215          189 NLLFAGYSDW  198 (212)
Q Consensus       189 nL~~~G~~~~  198 (212)
                      .+++.|+..+
T Consensus        79 ~~~~lgl~~~   88 (189)
T 3mn1_A           79 RAKSLGIEHL   88 (189)
T ss_dssp             HHHHHTCSEE
T ss_pred             HHHHcCCHHH
Confidence            6777788654

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=98.43  E-value=2.3e-07  Score=75.69  Aligned_cols=44  Identities=16%  Similarity=0.243  Sum_probs=36.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..++.||+.++++.|+++| +++++||.+...   +...|+++|+..+
T Consensus        94 ~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~---~~~~l~~~gl~~~  137 (231)
T 2p11_A           94 ASRVYPGALNALRHLGARG-PTVILSDGDVVF---QPRKIARSGLWDE  137 (231)
T ss_dssp             GGGBCTTHHHHHHHHHTTS-CEEEEEECCSSH---HHHHHHHTTHHHH
T ss_pred             hCCcCccHHHHHHHHHhCC-CEEEEeCCCHHH---HHHHHHHcCcHHh
Confidence            3578999999999999999 999999998753   3467778887654

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=98.43  E-value=4.2e-07  Score=73.63  Aligned_cols=45  Identities=18%  Similarity=0.255  Sum_probs=36.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHH---HHCCCCCC
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL---LFAGYSDW  198 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL---~~~G~~~~  198 (212)
                      ++.||+.++++.|+++ ++++++||.+........+.|   +..|+..+
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~  159 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY  159 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh
Confidence            5779999999999999 999999999876555444556   66777654

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=98.42  E-value=1.3e-06  Score=71.75  Aligned_cols=45  Identities=18%  Similarity=0.163  Sum_probs=35.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ...+.||+.++++.|+++|++++++||.+.....   ..++..|+..+
T Consensus       109 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~---~~l~~~~~~~~  153 (277)
T 3iru_A          109 RSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMA---PALIAAKEQGY  153 (277)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHH---HHHHHHHHTTC
T ss_pred             cCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHH---HHHHhcCcccC
Confidence            4689999999999999999999999999875444   44555554444

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=98.42  E-value=8.8e-07  Score=71.00  Aligned_cols=47  Identities=19%  Similarity=0.253  Sum_probs=38.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKL  201 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~L  201 (212)
                      ...+.||+.++++.|+++ ++++++|+.+..   .....|+..|+..+...
T Consensus       101 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~  147 (238)
T 3ed5_A          101 GHQLIDGAFDLISNLQQQ-FDLYIVTNGVSH---TQYKRLRDSGLFPFFKD  147 (238)
T ss_dssp             CCCBCTTHHHHHHHHHTT-SEEEEEECSCHH---HHHHHHHHTTCGGGCSE
T ss_pred             cCCCCccHHHHHHHHHhc-CeEEEEeCCCHH---HHHHHHHHcChHhhhhe
Confidence            468899999999999999 999999998764   34467888898876433

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=98.42  E-value=4.1e-07  Score=77.17  Aligned_cols=59  Identities=19%  Similarity=0.220  Sum_probs=46.8

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .++|+|||||||+++..                          ...+...+.+++++++|++++++|||+....   ...
T Consensus         4 ikli~~DlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~   54 (288)
T 1nrw_A            4 MKLIAIDLDGTLLNSKH--------------------------QVSLENENALRQAQRDGIEVVVSTGRAHFDV---MSI   54 (288)
T ss_dssp             CCEEEEECCCCCSCTTS--------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHH
T ss_pred             eEEEEEeCCCCCCCCCC--------------------------ccCHHHHHHHHHHHHCCCEEEEEeCCCHHHH---HHH
Confidence            57999999999998621                          3557788999999999999999999997533   345


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      ++..|+..
T Consensus        55 ~~~l~~~~   62 (288)
T 1nrw_A           55 FEPLGIKT   62 (288)
T ss_dssp             HGGGTCCC
T ss_pred             HHHcCCCC
Confidence            66667654

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=98.41  E-value=6.2e-07  Score=73.05  Aligned_cols=49  Identities=18%  Similarity=0.344  Sum_probs=39.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC-eEEe
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK-KLFL  203 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~-~Lil  203 (212)
                      ..+.||+.++++.|+++|++++++|+.+..   .+...++..|+..+. .++.
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~~~~  142 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPV---KQWEKILRLELDDFFEHVII  142 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHH---HHHHHHHHTTCGGGCSEEEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCch---hHHHHHHHcCcHhhccEEEE
Confidence            568999999999999999999999998764   344678889988764 4443

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=98.41  E-value=6.5e-07  Score=73.58  Aligned_cols=46  Identities=13%  Similarity=0.172  Sum_probs=38.7

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ....+.||+.++++.|+++|++++++|+.+..   .+...|+..|+..+
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~  152 (259)
T 4eek_A          107 TGVTAIEGAAETLRALRAAGVPFAIGSNSERG---RLHLKLRVAGLTEL  152 (259)
T ss_dssp             TTCEECTTHHHHHHHHHHHTCCEEEECSSCHH---HHHHHHHHTTCHHH
T ss_pred             ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHhcChHhh
Confidence            45688999999999999999999999999864   34467888888755

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=98.41  E-value=2.1e-07  Score=76.49  Aligned_cols=47  Identities=13%  Similarity=0.226  Sum_probs=36.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..++.||+.++++.|+++|++++++||.+...   +...|+  |+..++.++
T Consensus        75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~---~~~~l~--~l~~~~~v~  121 (236)
T 2fea_A           75 DAKIREGFREFVAFINEHEIPFYVISGGMDFF---VYPLLE--GIVEKDRIY  121 (236)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHH---HHHHHT--TTSCGGGEE
T ss_pred             CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHH---HHHHHh--cCCCCCeEE
Confidence            46899999999999999999999999998643   334554  775455444

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.40  E-value=3e-07  Score=77.88  Aligned_cols=61  Identities=18%  Similarity=0.091  Sum_probs=47.3

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      ...+.|+|||||||+++..                         ....+.+.+.+++++++|++++++|||+.....   
T Consensus        19 ~~~kli~~DlDGTLl~~~~-------------------------~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~---   70 (283)
T 3dao_A           19 GMIKLIATDIDGTLVKDGS-------------------------LLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEF---   70 (283)
T ss_dssp             CCCCEEEECCBTTTBSTTC-------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHH---
T ss_pred             cCceEEEEeCcCCCCCCCC-------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH---
Confidence            4688999999999998621                         135688999999999999999999999975433   


Q ss_pred             HHHHHCCCC
Q 028215          188 KNLLFAGYS  196 (212)
Q Consensus       188 ~nL~~~G~~  196 (212)
                      ..+...|..
T Consensus        71 ~~~~~l~~~   79 (283)
T 3dao_A           71 KLFAPIKHK   79 (283)
T ss_dssp             HHTGGGGGG
T ss_pred             HHHHHcCCC
Confidence            344445543

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.40  E-value=1.4e-07  Score=73.26  Aligned_cols=71  Identities=14%  Similarity=0.028  Sum_probs=47.2

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.++++||+||||+++..++.........|              ...++  .+++.|+++|++++++||++...   ...
T Consensus         3 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~--------------~~~~~--~~l~~l~~~g~~~~i~T~~~~~~---~~~   63 (164)
T 3e8m_A            3 EIKLILTDIDGVWTDGGMFYDQTGNEWKKF--------------NTSDS--AGIFWAHNKGIPVGILTGEKTEI---VRR   63 (164)
T ss_dssp             CCCEEEECSTTTTSSSEEEECSSSCEEEEE--------------EGGGH--HHHHHHHHTTCCEEEECSSCCHH---HHH
T ss_pred             cceEEEEcCCCceEcCcEEEcCCCcEEEEe--------------cCChH--HHHHHHHHCCCEEEEEeCCChHH---HHH
Confidence            478999999999999754332210000001              01111  27999999999999999998753   446


Q ss_pred             HHHHCCCCCC
Q 028215          189 NLLFAGYSDW  198 (212)
Q Consensus       189 nL~~~G~~~~  198 (212)
                      .++++|+..+
T Consensus        64 ~~~~~gl~~~   73 (164)
T 3e8m_A           64 RAEKLKVDYL   73 (164)
T ss_dssp             HHHHTTCSEE
T ss_pred             HHHHcCCCEe
Confidence            7778888754

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.40  E-value=1.4e-07  Score=77.96  Aligned_cols=71  Identities=18%  Similarity=0.200  Sum_probs=47.9

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.++||||+||||+|+..++...+.....|.              ..++.  +++.|+++|++++++||++...   +..
T Consensus        48 ~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~--------------~~d~~--~L~~L~~~G~~l~I~T~~~~~~---~~~  108 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLIYMGNQGEELKAFN--------------VRDGY--GIRCLITSDIDVAIITGRRAKL---LED  108 (211)
T ss_dssp             TCSEEEECCTTTTSSSEEEEETTSCEEEEEE--------------HHHHH--HHHHHHHTTCEEEEECSSCCHH---HHH
T ss_pred             CCCEEEEeCCCCEECCHHHHhhhhHHHHHhc--------------cchHH--HHHHHHHCCCEEEEEeCCCHHH---HHH
Confidence            4789999999999998654432210000110              11111  8999999999999999998753   446


Q ss_pred             HHHHCCCCCC
Q 028215          189 NLLFAGYSDW  198 (212)
Q Consensus       189 nL~~~G~~~~  198 (212)
                      .++.+|+..+
T Consensus       109 ~l~~lgi~~~  118 (211)
T 3ij5_A          109 RANTLGITHL  118 (211)
T ss_dssp             HHHHHTCCEE
T ss_pred             HHHHcCCchh
Confidence            7777788753

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=98.40  E-value=2.8e-07  Score=82.06  Aligned_cols=68  Identities=19%  Similarity=0.208  Sum_probs=55.1

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      .++++++||+||||++.                           ..++||+.++++.|+++|++++|+||++....+...
T Consensus        11 ~~~~~~l~D~DGvl~~g---------------------------~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~   63 (352)
T 3kc2_A           11 SKKIAFAFDIDGVLFRG---------------------------KKPIAGASDALKLLNRNKIPYILLTNGGGFSERART   63 (352)
T ss_dssp             -CCEEEEECCBTTTEET---------------------------TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHH
T ss_pred             ccCCEEEEECCCeeEcC---------------------------CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHH
Confidence            36889999999999974                           157899999999999999999999998866666667


Q ss_pred             HHHH-HCCCCCC-CeEE
Q 028215          188 KNLL-FAGYSDW-KKLF  202 (212)
Q Consensus       188 ~nL~-~~G~~~~-~~Li  202 (212)
                      +.|. .+|++.- ++++
T Consensus        64 ~~l~~~lgi~~~~~~i~   80 (352)
T 3kc2_A           64 EFISSKLDVDVSPLQII   80 (352)
T ss_dssp             HHHHHHHTSCCCGGGEE
T ss_pred             HHHHHhcCCCCChhhEe
Confidence            7887 5899743 3444

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=98.40  E-value=4.3e-07  Score=82.14  Aligned_cols=82  Identities=20%  Similarity=0.256  Sum_probs=55.9

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCCh-------
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNE-------  180 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~-------  180 (212)
                      ...++++||+||||+++...   ..|..   +...|        ..++||+.++|+.|+++|++++++||++.       
T Consensus        56 ~~~k~v~fD~DGTL~~~~~~---~~~~~---~~~~~--------~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~  121 (416)
T 3zvl_A           56 PQGKVAAFDLDGTLITTRSG---KVFPT---SPSDW--------RILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLP  121 (416)
T ss_dssp             CCSSEEEECSBTTTEECSSC---SSSCS---STTCC--------EESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSC
T ss_pred             CCCeEEEEeCCCCccccCCC---ccCCC---CHHHh--------hhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCC
Confidence            35789999999999976321   00110   01111        13789999999999999999999999762       


Q ss_pred             --hchHHHHHHHHHCCCCCCCeEEee
Q 028215          181 --FQRNTTEKNLLFAGYSDWKKLFLR  204 (212)
Q Consensus       181 --~~~~~T~~nL~~~G~~~~~~Lilr  204 (212)
                        .........|+.+|+. ++.++..
T Consensus       122 ~~~~~~~~~~~l~~lgl~-fd~i~~~  146 (416)
T 3zvl_A          122 AEVFKGKVEAVLEKLGVP-FQVLVAT  146 (416)
T ss_dssp             HHHHHHHHHHHHHHHTSC-CEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCC-EEEEEEC
Confidence              2223356778888986 5555543

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.39  E-value=1.8e-07  Score=74.42  Aligned_cols=69  Identities=14%  Similarity=0.074  Sum_probs=45.3

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.++|+||+||||++...++.........|..              .++.  +++.|+++|++++++||++...   +..
T Consensus        11 ~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~~--------------~~~~--~l~~L~~~g~~~~i~T~~~~~~---~~~   71 (176)
T 3mmz_A           11 DIDAVVLDFDGTQTDDRVLIDSDGREFVSVHR--------------GDGL--GIAALRKSGLTMLILSTEQNPV---VAA   71 (176)
T ss_dssp             GCSEEEECCTTTTSCSCCEECTTCCEEEEEEH--------------HHHH--HHHHHHHTTCEEEEEESSCCHH---HHH
T ss_pred             cCCEEEEeCCCCcCcCCEeecCCccHhHhccc--------------ccHH--HHHHHHHCCCeEEEEECcChHH---HHH
Confidence            46899999999999954443221000000100              0111  8999999999999999998754   346


Q ss_pred             HHHHCCCC
Q 028215          189 NLLFAGYS  196 (212)
Q Consensus       189 nL~~~G~~  196 (212)
                      .++..|+.
T Consensus        72 ~~~~lgi~   79 (176)
T 3mmz_A           72 RARKLKIP   79 (176)
T ss_dssp             HHHHHTCC
T ss_pred             HHHHcCCe
Confidence            67777876

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=98.37  E-value=4.2e-07  Score=76.39  Aligned_cols=47  Identities=19%  Similarity=0.171  Sum_probs=40.7

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      .++.|+|||||||+++..                          .+-+.+.+.+++|+++|++++++|||+..
T Consensus         3 ~~kli~~DlDGTLl~~~~--------------------------~i~~~~~~~l~~l~~~g~~~~iaTGR~~~   49 (246)
T 3f9r_A            3 KRVLLLFDVDGTLTPPRL--------------------------CQTDEMRALIKRARGAGFCVGTVGGSDFA   49 (246)
T ss_dssp             CSEEEEECSBTTTBSTTS--------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred             CceEEEEeCcCCcCCCCC--------------------------ccCHHHHHHHHHHHHCCCEEEEECCCCHH
Confidence            368999999999998621                          45578999999999999999999999975

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.37  E-value=4.1e-07  Score=72.12  Aligned_cols=46  Identities=15%  Similarity=0.172  Sum_probs=37.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKL  201 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~L  201 (212)
                      ..++.||+.+ ++.|+++ ++++++||++..   .+...|++.|+..+...
T Consensus        72 ~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~  117 (201)
T 2w43_A           72 NLKAYEDTKY-LKEISEI-AEVYALSNGSIN---EVKQHLERNGLLRYFKG  117 (201)
T ss_dssp             TCEECGGGGG-HHHHHHH-SEEEEEESSCHH---HHHHHHHHTTCGGGCSE
T ss_pred             ccccCCChHH-HHHHHhC-CeEEEEeCcCHH---HHHHHHHHCCcHHhCcE
Confidence            3578999999 9999999 999999999864   34567888998876433

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=98.36  E-value=3e-06  Score=66.99  Aligned_cols=46  Identities=22%  Similarity=0.128  Sum_probs=38.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ...+.|++.++++.++++|++++++|+.+...   ....++..|+..+.
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~l~~~~~~~~~  137 (226)
T 1te2_A           92 TRPLLPGVREAVALCKEQGLLVGLASASPLHM---LEKVLTMFDLRDSF  137 (226)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHTTCGGGC
T ss_pred             cCCcCccHHHHHHHHHHCCCcEEEEeCCcHHH---HHHHHHhcCcHhhC
Confidence            46789999999999999999999999987653   34677888887654

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=98.36  E-value=3.4e-07  Score=75.80  Aligned_cols=59  Identities=15%  Similarity=0.137  Sum_probs=47.3

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.++||+||||+++.                          ..+.|.+.+.+++|+++|++++++|||+.....   ..
T Consensus         5 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~---~~   55 (227)
T 1l6r_A            5 IRLAAIDVDGNLTDRD--------------------------RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVY---AL   55 (227)
T ss_dssp             CCEEEEEHHHHSBCTT--------------------------SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHH---HH
T ss_pred             eEEEEEECCCCCcCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHH---HH
Confidence            4799999999999751                          145678999999999999999999999875433   45


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      ++..|+..
T Consensus        56 ~~~l~~~~   63 (227)
T 1l6r_A           56 KIFLGING   63 (227)
T ss_dssp             HHHHTCCS
T ss_pred             HHHhCCCC
Confidence            56667764

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=98.35  E-value=6.3e-07  Score=70.70  Aligned_cols=31  Identities=16%  Similarity=0.471  Sum_probs=27.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhc
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQ  182 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~  182 (212)
                      .++.||+.++++.|+++|++++++||.+...
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~  120 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLH  120 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence            5689999999999999999999999987653

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.35  E-value=4.6e-07  Score=75.38  Aligned_cols=49  Identities=29%  Similarity=0.346  Sum_probs=40.8

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ  182 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~  182 (212)
                      ..++|+||+||||++..                         .....+.+.+.+++++++|++++++|||+...
T Consensus        11 miKli~~DlDGTLl~~~-------------------------~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~   59 (268)
T 3r4c_A           11 MIKVLLLDVDGTLLSFE-------------------------THKVSQSSIDALKKVHDSGIKIVIATGRAASD   59 (268)
T ss_dssp             CCCEEEECSBTTTBCTT-------------------------TCSCCHHHHHHHHHHHHTTCEEEEECSSCTTC
T ss_pred             ceEEEEEeCCCCCcCCC-------------------------CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence            46899999999999831                         01456788999999999999999999998654

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=98.34  E-value=2.7e-07  Score=73.29  Aligned_cols=44  Identities=11%  Similarity=0.307  Sum_probs=34.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHH------CCCCCCC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF------AGYSDWK  199 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~------~G~~~~~  199 (212)
                      .++.|++.++++.|++ |++++++||.+...   ....++.      .|+..+.
T Consensus        88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~---~~~~~~~l~~~~~~~l~~~f  137 (211)
T 2i6x_A           88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYV---LDLAMSPRFLPSGRTLDSFF  137 (211)
T ss_dssp             EEECHHHHHHHHHHTT-TSEEEEEECCCHHH---HHHHTSTTSSTTCCCGGGGS
T ss_pred             cccChHHHHHHHHHHc-CCeEEEEeCCCHHH---HHHHHhhhccccccCHHHHc
Confidence            3678999999999999 99999999987643   3345555      6776653

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=98.34  E-value=1.4e-06  Score=71.25  Aligned_cols=31  Identities=19%  Similarity=0.283  Sum_probs=28.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      ...+.||+.++++.|+++|++++++|+.+..
T Consensus       110 ~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~  140 (250)
T 3l5k_A          110 TAALMPGAEKLIIHLRKHGIPFALATSSRSA  140 (250)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCCEEEECSCCHH
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHH
Confidence            5689999999999999999999999999864

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=98.33  E-value=8.7e-07  Score=76.30  Aligned_cols=49  Identities=20%  Similarity=0.251  Sum_probs=41.3

Q ss_pred             CceEEEecCCCCCCC-hhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchH
Q 028215          110 KDAWVFDIDETLLSN-LPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRN  184 (212)
Q Consensus       110 ~~avvfDIDgTLldn-~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~  184 (212)
                      .+.++|||||||+++ .                          ....|.+.+.+++|+++|++++++|||+.....
T Consensus        27 ikli~~DlDGTLl~~~~--------------------------~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~   76 (301)
T 2b30_A           27 IKLLLIDFDGTLFVDKD--------------------------IKVPSENIDAIKEAIEKGYMVSICTGRSKVGIL   76 (301)
T ss_dssp             CCEEEEETBTTTBCCTT--------------------------TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHH
T ss_pred             ccEEEEECCCCCcCCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence            589999999999975 2                          145678899999999999999999999975444

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=98.33  E-value=6.2e-07  Score=71.85  Aligned_cols=47  Identities=19%  Similarity=0.205  Sum_probs=39.1

Q ss_pred             CCCCChhHHHHHHHHHHC-CCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQL-GFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~-G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ...+.||+.++++.|+++ |++++++||.+..   .+...|+..|+..+..
T Consensus        91 ~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~~f~  138 (234)
T 2hcf_A           91 DITLLEGVRELLDALSSRSDVLLGLLTGNFEA---SGRHKLKLPGIDHYFP  138 (234)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSCHH---HHHHHHHTTTCSTTCS
T ss_pred             CCCcCCCHHHHHHHHHhCCCceEEEEcCCcHH---HHHHHHHHCCchhhcC
Confidence            356789999999999999 9999999998764   3446788899887654

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=98.33  E-value=7.9e-07  Score=74.00  Aligned_cols=44  Identities=14%  Similarity=0.098  Sum_probs=37.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      .++.||+.++++.|+++|++++++||.+..    ....|+..|+..+.
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~----~~~~l~~~gl~~~f  148 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR----LEGILGGLGLREHF  148 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCTT----HHHHHHHTTCGGGC
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcHH----HHHHHHhCCcHHhh
Confidence            478999999999999999999999997663    25678889987664

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=98.32  E-value=3.4e-06  Score=67.20  Aligned_cols=47  Identities=15%  Similarity=0.072  Sum_probs=37.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      .+.|++.++++.|+++|++++++|+.+..........++..|+..+.
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f  145 (235)
T 2om6_A           99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI  145 (235)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh
Confidence            46999999999999999999999998711123445678888987754

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=98.32  E-value=7.5e-07  Score=74.32  Aligned_cols=57  Identities=19%  Similarity=0.213  Sum_probs=43.8

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.|+|||||||+ +.                           ..++.+.+.+++|+++|++++++|||+.....   ..
T Consensus         2 ikli~~DlDGTLl-~~---------------------------~~~~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~---~~   50 (249)
T 2zos_A            2 IRLIFLDIDKTLI-PG---------------------------YEPDPAKPIIEELKDMGFEIIFNSSKTRAEQE---YY   50 (249)
T ss_dssp             EEEEEECCSTTTC-TT---------------------------SCSGGGHHHHHHHHHTTEEEEEBCSSCHHHHH---HH
T ss_pred             ccEEEEeCCCCcc-CC---------------------------CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHH---HH
Confidence            4689999999999 41                           11245899999999999999999999975433   45


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      ++..|++.
T Consensus        51 ~~~~~~~~   58 (249)
T 2zos_A           51 RKELEVET   58 (249)
T ss_dssp             HHHHTCCS
T ss_pred             HHHcCCCc
Confidence            56667753

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=98.31  E-value=1.7e-06  Score=67.14  Aligned_cols=46  Identities=13%  Similarity=0.144  Sum_probs=36.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ...+.|++.++++.++++|++++++|+.+...   .. .++..|+..+..
T Consensus        83 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~-~~~~~~~~~~f~  128 (207)
T 2go7_A           83 QVVLMPGAREVLAWADESGIQQFIYTHKGNNA---FT-ILKDLGVESYFT  128 (207)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCTHH---HH-HHHHHTCGGGEE
T ss_pred             cceeCcCHHHHHHHHHHCCCeEEEEeCCchHH---HH-HHHHcCchhhee
Confidence            34678999999999999999999999987643   33 556668776543

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.31  E-value=6.5e-07  Score=74.65  Aligned_cols=47  Identities=32%  Similarity=0.391  Sum_probs=39.4

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhch
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQR  183 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~  183 (212)
                      ++++|||||||+++..                         ....+.+.+.+++|+++|++++++|||+ ...
T Consensus         3 kli~~DlDGTLl~~~~-------------------------~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~   49 (261)
T 2rbk_A            3 KALFFDIDGTLVSFET-------------------------HRIPSSTIEALEAAHAKGLKIFIATGRP-KAI   49 (261)
T ss_dssp             CEEEECSBTTTBCTTT-------------------------SSCCHHHHHHHHHHHHTTCEEEEECSSC-GGG
T ss_pred             cEEEEeCCCCCcCCCC-------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCh-HHH
Confidence            6899999999998621                         0156788999999999999999999999 643

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=98.30  E-value=6.7e-07  Score=75.21  Aligned_cols=46  Identities=26%  Similarity=0.405  Sum_probs=38.4

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChh-HHHHHHHHHHCCCeEEEEcCCChh
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPA-SLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg-~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      .+.++|||||||+++.                          ....+. +.+.+++|+++|++++++|||+..
T Consensus         3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~   49 (271)
T 1rlm_A            3 VKVIVTDMDGTFLNDA--------------------------KTYNQPRFMAQYQELKKRGIKFVVASGNQYY   49 (271)
T ss_dssp             CCEEEECCCCCCSCTT--------------------------SCCCHHHHHHHHHHHHHHTCEEEEECSSCHH
T ss_pred             ccEEEEeCCCCCCCCC--------------------------CcCCHHHHHHHHHHHHHCCCEEEEEeCCcHH
Confidence            5799999999999862                          134556 489999999999999999999864

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.29  E-value=8.3e-07  Score=75.85  Aligned_cols=47  Identities=13%  Similarity=0.095  Sum_probs=39.8

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChh-HHHHHHHHHHCCCeEEEEcCCChh
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPA-SLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg-~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      ..++|+||+||||+++..                          ...+. +.+.+++++++|++++++|||+..
T Consensus        36 ~iKli~fDlDGTLld~~~--------------------------~i~~~~~~~al~~l~~~G~~~~iaTGR~~~   83 (304)
T 3l7y_A           36 SVKVIATDMDGTFLNSKG--------------------------SYDHNRFQRILKQLQERDIRFVVASSNPYR   83 (304)
T ss_dssp             CCSEEEECCCCCCSCTTS--------------------------CCCHHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred             eeEEEEEeCCCCCCCCCC--------------------------ccCHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence            368999999999998731                          34566 789999999999999999999874

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=98.29  E-value=1.2e-06  Score=73.64  Aligned_cols=58  Identities=16%  Similarity=0.039  Sum_probs=45.0

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .+.++||+||||+++.                          ....+.+.+.+++ +++|++++++|||+.....   ..
T Consensus         2 ikli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~---~~   51 (268)
T 1nf2_A            2 YRVFVFDLDGTLLNDN--------------------------LEISEKDRRNIEK-LSRKCYVVFASGRMLVSTL---NV   51 (268)
T ss_dssp             BCEEEEECCCCCSCTT--------------------------SCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHH---HH
T ss_pred             ccEEEEeCCCcCCCCC--------------------------CccCHHHHHHHHH-HhCCCEEEEECCCChHHHH---HH
Confidence            4789999999999852                          1455778999999 9999999999999975433   45


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      +...|+..
T Consensus        52 ~~~l~~~~   59 (268)
T 1nf2_A           52 EKKYFKRT   59 (268)
T ss_dssp             HHHHSSSC
T ss_pred             HHHhCCCC
Confidence            55667653

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=98.29  E-value=1.4e-06  Score=71.39  Aligned_cols=65  Identities=20%  Similarity=0.228  Sum_probs=47.5

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..++|+||+||||+++.  |.                     ...+.++..+.++.++++|+++.++|++.........+
T Consensus        11 ~~k~i~fDlDGTLl~s~--~~---------------------~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~   67 (271)
T 2x4d_A           11 GVRGVLLDISGVLYDSG--AG---------------------GGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVG   67 (271)
T ss_dssp             TCCEEEECCBTTTEECC--TT---------------------TCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHH
T ss_pred             cCCEEEEeCCCeEEecC--CC---------------------CCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHH
Confidence            36899999999999862  00                     01356788888999999999999999443333344556


Q ss_pred             HHHHCCCC
Q 028215          189 NLLFAGYS  196 (212)
Q Consensus       189 nL~~~G~~  196 (212)
                      .+...|+.
T Consensus        68 ~l~~~g~~   75 (271)
T 2x4d_A           68 QLQRLGFD   75 (271)
T ss_dssp             HHHHTTCC
T ss_pred             HHHHCCCC
Confidence            77777775

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=98.29  E-value=1.2e-06  Score=70.51  Aligned_cols=60  Identities=22%  Similarity=0.316  Sum_probs=45.0

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .++|+||+||||+++.                           ..++.+.++++.++++|+++.++|++.........+.
T Consensus         3 ~k~i~fDlDGTLl~~~---------------------------~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~   55 (250)
T 2c4n_A            3 IKNVICDIDGVLMHDN---------------------------VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANR   55 (250)
T ss_dssp             CCEEEEECBTTTEETT---------------------------EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHH
T ss_pred             ccEEEEcCcceEEeCC---------------------------EeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHH
Confidence            5799999999999863                           2344558889999999999999995543333445566


Q ss_pred             HHHCCCC
Q 028215          190 LLFAGYS  196 (212)
Q Consensus       190 L~~~G~~  196 (212)
                      +...|+.
T Consensus        56 ~~~~g~~   62 (250)
T 2c4n_A           56 FATAGVD   62 (250)
T ss_dssp             HHHTTCC
T ss_pred             HHHcCCC
Confidence            7777775

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.29  E-value=1.3e-06  Score=78.26  Aligned_cols=86  Identities=20%  Similarity=0.166  Sum_probs=58.9

Q ss_pred             CCCceEEEecCCCCCCChhhHhh-hcCCC---------------CC--------------CCHHHHHHHHHhcCCCCChh
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAA-HGFGS---------------EI--------------FNEDAFDEWVDLAKAPALPA  157 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~-~~~g~---------------~~--------------~~~~~~~~wv~~~~~~~~pg  157 (212)
                      ..+++|+||+||||+++.....- ..+|.               ..              .+.+.+.++.  ...++.||
T Consensus       183 ~~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~pg  260 (415)
T 3p96_A          183 RAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVA--GQLELMPG  260 (415)
T ss_dssp             TCCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHHH--HHCCBCTT
T ss_pred             cCCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHHH--HhCccCcc
Confidence            35789999999999997643211 01110               00              1111222222  24589999


Q ss_pred             HHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          158 SLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       158 ~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      +.++++.|+++|++++++||....   .+...++++|+..+
T Consensus       261 ~~e~l~~Lk~~G~~~~ivS~~~~~---~~~~~~~~lgl~~~  298 (415)
T 3p96_A          261 ARTTLRTLRRLGYACGVVSGGFRR---IIEPLAEELMLDYV  298 (415)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHTTCSEE
T ss_pred             HHHHHHHHHHCCCEEEEEcCCcHH---HHHHHHHHcCccce
Confidence            999999999999999999998764   45578888999755

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=98.27  E-value=3e-06  Score=67.07  Aligned_cols=46  Identities=20%  Similarity=0.201  Sum_probs=36.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..+.|++.++++.|+++|++++++|+. .    .....++..|+..+...+
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~-~----~~~~~l~~~~l~~~f~~~  135 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS-K----NGPFLLERMNLTGYFDAI  135 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC-T----THHHHHHHTTCGGGCSEE
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc-H----HHHHHHHHcChHHHcceE
Confidence            467899999999999999999999998 2    233567788887664433

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.27  E-value=1e-06  Score=71.82  Aligned_cols=70  Identities=21%  Similarity=0.201  Sum_probs=47.7

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.++|+||+||||+++..++...+-..                ....+.....++.|+++|++++++||++..   .+..
T Consensus        24 ~ik~vifD~DGtL~d~~~~~~~~~~~~----------------~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~---~~~~   84 (195)
T 3n07_A           24 QIKLLICDVDGVFSDGLIYMGNQGEEL----------------KTFHTRDGYGVKALMNAGIEIAIITGRRSQ---IVEN   84 (195)
T ss_dssp             TCCEEEECSTTTTSCSCCEECTTSCEE----------------CCCCTTHHHHHHHHHHTTCEEEEECSSCCH---HHHH
T ss_pred             CCCEEEEcCCCCcCCCcEEEccCchhh----------------heeecccHHHHHHHHHCCCEEEEEECcCHH---HHHH
Confidence            578999999999999754432211000                011122233599999999999999999875   3446


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .+++.|+..
T Consensus        85 ~l~~lgi~~   93 (195)
T 3n07_A           85 RMKALGISL   93 (195)
T ss_dssp             HHHHTTCCE
T ss_pred             HHHHcCCcE
Confidence            778888875

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=98.24  E-value=5e-06  Score=66.42  Aligned_cols=41  Identities=17%  Similarity=0.212  Sum_probs=32.9

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ....+.||+.++++.|+++ ++++++||.+..        |+..|+..+.
T Consensus       102 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~--------l~~~~l~~~f  142 (230)
T 3vay_A          102 HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD--------VRRLGLADYF  142 (230)
T ss_dssp             TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC--------GGGSTTGGGC
T ss_pred             ccCccCcCHHHHHHHHHhC-CeEEEEECCchh--------hhhcCcHHHe
Confidence            3467999999999999999 999999998763        4556666543

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=98.23  E-value=4.5e-06  Score=66.72  Aligned_cols=46  Identities=17%  Similarity=0.156  Sum_probs=38.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ...+.|++.++++.|+++ ++++++|+.+..   .....++..|+..+..
T Consensus        98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~---~~~~~l~~~~~~~~f~  143 (234)
T 3u26_A           98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTE---QAMAFLDALGIKDLFD  143 (234)
T ss_dssp             HCCBCTTHHHHHHHHTTT-SEEEEEESSCHH---HHHHHHHHTTCGGGCS
T ss_pred             hCCcCcCHHHHHHHHHhC-CcEEEEECCCHH---HHHHHHHHcCcHHHcc
Confidence            467899999999999999 999999999874   3446788889876543

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=98.23  E-value=2.2e-06  Score=69.19  Aligned_cols=45  Identities=20%  Similarity=0.138  Sum_probs=35.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKK  200 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~  200 (212)
                      ..++.|++.++++.|+++ ++++++|+.+....   ...++..|+. ++.
T Consensus       114 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~---~~~l~~~~~~-f~~  158 (254)
T 3umg_A          114 VLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLL---LDMAKNAGIP-WDV  158 (254)
T ss_dssp             SCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHH---HHHHHHHTCC-CSC
T ss_pred             hCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHH---HHHHHhCCCC-eeE
Confidence            347799999999999997 99999999886543   3566677775 443

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=98.23  E-value=3.3e-06  Score=70.75  Aligned_cols=51  Identities=12%  Similarity=0.054  Sum_probs=39.6

Q ss_pred             cCCCCChhHHHHHHHHHHC-CCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          150 AKAPALPASLTFYKELKQL-GFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~-G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ....+.||+.++++.|+++ |++++++|+.+...   ....|+..|+..++.++.
T Consensus       111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~---~~~~l~~~~l~~f~~i~~  162 (275)
T 2qlt_A          111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDM---AKKWFDILKIKRPEYFIT  162 (275)
T ss_dssp             TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHH---HHHHHHHHTCCCCSSEEC
T ss_pred             cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHH---HHHHHHHcCCCccCEEEE
Confidence            3457899999999999999 99999999988653   346777778775544443

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.22  E-value=5.7e-07  Score=72.04  Aligned_cols=70  Identities=17%  Similarity=0.169  Sum_probs=46.4

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.++++||+||||+++..++...+.....|                ...-..+++.|+++|++++++||++...   ...
T Consensus        25 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~----------------~~~d~~~l~~L~~~g~~v~ivT~~~~~~---~~~   85 (188)
T 2r8e_A           25 NIRLLILDVDGVLSDGLIYMGNNGEELKAF----------------NVRDGYGIRCALTSDIEVAIITGRKAKL---VED   85 (188)
T ss_dssp             TCSEEEECCCCCCBCSEEEEETTSCEEEEE----------------EHHHHHHHHHHHTTTCEEEEECSSCCHH---HHH
T ss_pred             cCCEEEEeCCCCcCCCCEEecCCCcEEEEe----------------ecccHHHHHHHHHCCCeEEEEeCCChHH---HHH
Confidence            578999999999998755433211000001                0111238999999999999999998753   345


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .++..|+..
T Consensus        86 ~l~~lgl~~   94 (188)
T 2r8e_A           86 RCATLGITH   94 (188)
T ss_dssp             HHHHHTCCE
T ss_pred             HHHHcCCce
Confidence            667778764

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.22  E-value=4.4e-07  Score=73.29  Aligned_cols=71  Identities=17%  Similarity=0.204  Sum_probs=46.8

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.++++||+||||+++..++....-....|              ...++.  .++.|+++|++++++||++...   +..
T Consensus        18 ~ik~vifD~DGtL~~~~~~~~~~~~~~~~~--------------~~~d~~--~l~~L~~~g~~~~ivTn~~~~~---~~~   78 (191)
T 3n1u_A           18 KIKCLICDVDGVLSDGLLHIDNHGNELKSF--------------HVQDGM--GLKLLMAAGIQVAIITTAQNAV---VDH   78 (191)
T ss_dssp             TCSEEEECSTTTTBCSCCEECTTCCEECCB--------------CHHHHH--HHHHHHHTTCEEEEECSCCSHH---HHH
T ss_pred             cCCEEEEeCCCCCCCCceeecCCchhhhhc--------------cccChH--HHHHHHHCCCeEEEEeCcChHH---HHH
Confidence            578999999999998654332210000001              111222  5999999999999999998753   446


Q ss_pred             HHHHCCCCCC
Q 028215          189 NLLFAGYSDW  198 (212)
Q Consensus       189 nL~~~G~~~~  198 (212)
                      .++..|+..+
T Consensus        79 ~l~~lgl~~~   88 (191)
T 3n1u_A           79 RMEQLGITHY   88 (191)
T ss_dssp             HHHHHTCCEE
T ss_pred             HHHHcCCccc
Confidence            7777788753

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=98.21  E-value=1.4e-06  Score=73.34  Aligned_cols=48  Identities=8%  Similarity=0.086  Sum_probs=37.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHH---HCCCCCCCeE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL---FAGYSDWKKL  201 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~---~~G~~~~~~L  201 (212)
                      ..++.||+.++++.|+++|++++++||.+.....   ..|+   ..|+..|...
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~---~~l~~~~~~~l~~~fd~  178 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQK---LLFGHSTEGDILELVDG  178 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHH---HHHHTBTTBCCGGGCSE
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHH---HHHHhhcccChHhhccE
Confidence            4688999999999999999999999999875333   4455   3457766433

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=98.20  E-value=5.3e-07  Score=70.41  Aligned_cols=44  Identities=23%  Similarity=0.238  Sum_probs=35.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..++.||+.++++.|+++|++++++|+.+.....   .. +..|+..+
T Consensus        77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~---~~-~~~~~~~~  120 (201)
T 4ap9_A           77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLE---PF-KELGDEFM  120 (201)
T ss_dssp             GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSG---GG-TTTSSEEE
T ss_pred             hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHH---HH-HHcCchhh
Confidence            4688999999999999999999999998765433   23 56677654

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=98.18  E-value=1.5e-06  Score=71.95  Aligned_cols=47  Identities=26%  Similarity=0.292  Sum_probs=39.5

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      .+++.++|||||||+++.                          ...-+.+.+.+++|+++ ++++++|||+..
T Consensus         4 ~~~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~-i~v~iaTGR~~~   50 (246)
T 2amy_A            4 PGPALCLFDVDGTLTAPR--------------------------QKITKEMDDFLQKLRQK-IKIGVVGGSDFE   50 (246)
T ss_dssp             CCSEEEEEESBTTTBCTT--------------------------SCCCHHHHHHHHHHTTT-SEEEEECSSCHH
T ss_pred             CCceEEEEECCCCcCCCC--------------------------cccCHHHHHHHHHHHhC-CeEEEEcCCCHH
Confidence            357899999999999751                          13457899999999999 999999999854

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.17  E-value=3.2e-06  Score=71.90  Aligned_cols=45  Identities=20%  Similarity=0.113  Sum_probs=37.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..++.||+.++++.|+++|++++++||++...   +...++..|+..+
T Consensus       161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~---~~~~l~~~gl~~~  205 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRS---AEAISRELNLDLV  205 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCSEE
T ss_pred             ccccchhHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHhCCcee
Confidence            35899999999999999999999999998753   3456777788754

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=98.15  E-value=5.9e-06  Score=65.87  Aligned_cols=30  Identities=23%  Similarity=0.461  Sum_probs=26.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhc
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQ  182 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~  182 (212)
                      .++.|++.++++.|++ |++++++||.+...
T Consensus        98 ~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~  127 (240)
T 3smv_A           98 WPAFPDTVEALQYLKK-HYKLVILSNIDRNE  127 (240)
T ss_dssp             CCBCTTHHHHHHHHHH-HSEEEEEESSCHHH
T ss_pred             CCCCCcHHHHHHHHHh-CCeEEEEeCCChhH
Confidence            4789999999999999 89999999998753

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=98.14  E-value=2.7e-06  Score=70.85  Aligned_cols=43  Identities=23%  Similarity=0.291  Sum_probs=37.2

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      .|+||+||||+++.                           ...+.+.+.+++++++|++++++|||+..
T Consensus         2 li~~DlDGTLl~~~---------------------------~i~~~~~~al~~l~~~Gi~v~iaTGR~~~   44 (259)
T 3zx4_A            2 IVFTDLDGTLLDER---------------------------GELGPAREALERLRALGVPVVPVTAKTRK   44 (259)
T ss_dssp             EEEECCCCCCSCSS---------------------------SSCSTTHHHHHHHHHTTCCEEEBCSSCHH
T ss_pred             EEEEeCCCCCcCCC---------------------------cCCHHHHHHHHHHHHCCCeEEEEeCCCHH
Confidence            68999999999862                           24467789999999999999999999974

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=98.12  E-value=1.5e-05  Score=65.46  Aligned_cols=34  Identities=21%  Similarity=0.155  Sum_probs=29.7

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchH
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRN  184 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~  184 (212)
                      ...+.|++.++++.|+++|++++++|+.+.....
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~  134 (267)
T 1swv_A          101 YASPINGVKEVIASLRERGIKIGSTTGYTREMMD  134 (267)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHH
T ss_pred             ccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHH
Confidence            4678999999999999999999999998865444

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=98.11  E-value=4.1e-06  Score=67.97  Aligned_cols=46  Identities=22%  Similarity=0.254  Sum_probs=35.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..+.|++.++++.|+++ ++++++|+.+...   ....++..|+. ++.++
T Consensus       119 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~---~~~~l~~~g~~-f~~~~  164 (254)
T 3umc_A          119 LRPWPDTLAGMHALKAD-YWLAALSNGNTAL---MLDVARHAGLP-WDMLL  164 (254)
T ss_dssp             CEECTTHHHHHHHHTTT-SEEEECCSSCHHH---HHHHHHHHTCC-CSEEC
T ss_pred             CCCCccHHHHHHHHHhc-CeEEEEeCCCHHH---HHHHHHHcCCC-cceEE
Confidence            46789999999999986 9999999987653   34567777876 55443

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=98.09  E-value=3.1e-06  Score=70.33  Aligned_cols=50  Identities=22%  Similarity=0.262  Sum_probs=39.1

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ  182 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~  182 (212)
                      +.++|||||||++....                     .....+.|.+.+.+++|+++| +++++|||+...
T Consensus         2 kli~~DlDGTLl~~~~~---------------------~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~   51 (239)
T 1u02_A            2 SLIFLDYDGTLVPIIMN---------------------PEESYADAGLLSLISDLKERF-DTYIVTGRSPEE   51 (239)
T ss_dssp             CEEEEECBTTTBCCCSC---------------------GGGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHH
T ss_pred             eEEEEecCCCCcCCCCC---------------------cccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHH
Confidence            68999999999974210                     001246688999999999999 999999998753

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=98.06  E-value=3.6e-06  Score=70.68  Aligned_cols=47  Identities=21%  Similarity=0.311  Sum_probs=38.6

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      ..++.++|||||||+++.                          ...-|.+.+.+++|+++ ++++++|||+..
T Consensus        11 ~~~kli~~DlDGTLl~~~--------------------------~~is~~~~~al~~l~~~-i~v~iaTGR~~~   57 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPAR--------------------------QKIDPEVAAFLQKLRSR-VQIGVVGGSDYC   57 (262)
T ss_dssp             --CEEEEEESBTTTBSTT--------------------------SCCCHHHHHHHHHHTTT-SEEEEECSSCHH
T ss_pred             cCeEEEEEeCccCCCCCC--------------------------CcCCHHHHHHHHHHHhC-CEEEEEcCCCHH
Confidence            357899999999999751                          13557899999999999 999999999864

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.00  E-value=1.7e-05  Score=66.89  Aligned_cols=65  Identities=14%  Similarity=0.075  Sum_probs=42.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHH-HHHCCCeEEEEcCCChhchHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKE-LKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~-Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      .+++|+||+||||+++. .           ++..         ...+....+.++. +++.|++++++|||+...   ..
T Consensus        21 ~~kliifDlDGTLlds~-i-----------~~~~---------~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~---~~   76 (289)
T 3gyg_A           21 PQYIVFCDFDETYFPHT-I-----------DEQK---------QQDIYELEDYLEQKSKDGELIIGWVTGSSIES---IL   76 (289)
T ss_dssp             CSEEEEEETBTTTBCSS-C-----------CHHH---------HHHHHHHHHHHHHHHHTTCEEEEEECSSCHHH---HH
T ss_pred             CCeEEEEECCCCCcCCC-C-----------Ccch---------HHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHH---HH
Confidence            47899999999999973 0           0000         0112222334443 468899999999999754   34


Q ss_pred             HHHHHCCCCC
Q 028215          188 KNLLFAGYSD  197 (212)
Q Consensus       188 ~nL~~~G~~~  197 (212)
                      ..+...|++.
T Consensus        77 ~~~~~~g~~~   86 (289)
T 3gyg_A           77 DKMGRGKFRY   86 (289)
T ss_dssp             HHHHHTTCCB
T ss_pred             HHHHhhccCC
Confidence            6777788863

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=97.95  E-value=5.9e-06  Score=73.59  Aligned_cols=28  Identities=21%  Similarity=0.173  Sum_probs=26.2

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGR  178 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR  178 (212)
                      ..++.||+.++|+.|+++|++++++||.
T Consensus        98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~  125 (555)
T 3i28_A           98 ARKINRPMLQAALMLRKKGFTTAILTNT  125 (555)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             hcCcChhHHHHHHHHHHCCCEEEEEeCC
Confidence            3578999999999999999999999997

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=97.89  E-value=3.5e-05  Score=65.00  Aligned_cols=36  Identities=17%  Similarity=0.312  Sum_probs=28.8

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFA  193 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~  193 (212)
                      ..+++||+.++|+.    |++++++||.+...   +...|+..
T Consensus       123 ~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~---~~~~l~~~  158 (253)
T 2g80_A          123 KAPVYADAIDFIKR----KKRVFIYSSGSVKA---QKLLFGYV  158 (253)
T ss_dssp             CBCCCHHHHHHHHH----CSCEEEECSSCHHH---HHHHHHSB
T ss_pred             cCCCCCCHHHHHHc----CCEEEEEeCCCHHH---HHHHHHhh
Confidence            35789999999988    99999999998753   34566665

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=97.84  E-value=9.6e-06  Score=67.40  Aligned_cols=55  Identities=18%  Similarity=0.182  Sum_probs=39.4

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHH
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL  190 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL  190 (212)
                      ..+++||||||+++..                           .++.+.+.+++++ +|++++++|||+....   ...+
T Consensus         4 ~li~~DlDGTLl~~~~---------------------------~~~~~~~~l~~~~-~gi~v~iaTGR~~~~~---~~~~   52 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQQ---------------------------ALEHLQEYLGDRR-GNFYLAYATGRSYHSA---RELQ   52 (244)
T ss_dssp             EEEEECTBTTTBSCHH---------------------------HHHHHHHHHHTTG-GGEEEEEECSSCHHHH---HHHH
T ss_pred             eEEEEeCCCCCcCCHH---------------------------HHHHHHHHHHHhc-CCCEEEEEcCCCHHHH---HHHH
Confidence            3899999999998521                           1145677787755 6899999999987543   3455


Q ss_pred             HHCCCC
Q 028215          191 LFAGYS  196 (212)
Q Consensus       191 ~~~G~~  196 (212)
                      +..|+.
T Consensus        53 ~~l~l~   58 (244)
T 1s2o_A           53 KQVGLM   58 (244)
T ss_dssp             HHHTCC
T ss_pred             HHcCCC
Confidence            665664

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.84  E-value=9.4e-06  Score=64.72  Aligned_cols=68  Identities=18%  Similarity=0.156  Sum_probs=42.0

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      .+.+.++||+||||++..-++...+-....|+              ...+  ..++.|+++|++++++||+ +.    +.
T Consensus         7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~--------------~~D~--~~L~~Lk~~Gi~~~I~Tg~-~~----~~   65 (168)
T 3ewi_A            7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYD--------------VKDA--IGISLLKKSGIEVRLISER-AC----SK   65 (168)
T ss_dssp             CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEE--------------HHHH--HHHHHHHHTTCEEEEECSS-CC----CH
T ss_pred             hcCcEEEEeCccceECCcEEEcCCCCEEEEEe--------------cCcH--HHHHHHHHCCCEEEEEeCc-HH----HH
Confidence            36889999999999986433221100000011              0111  2689999999999999999 32    23


Q ss_pred             HHHH--HCCCC
Q 028215          188 KNLL--FAGYS  196 (212)
Q Consensus       188 ~nL~--~~G~~  196 (212)
                      ..++  ..|+.
T Consensus        66 ~~l~~l~lgi~   76 (168)
T 3ewi_A           66 QTLSALKLDCK   76 (168)
T ss_dssp             HHHHTTCCCCC
T ss_pred             HHHHHhCCCcE
Confidence            4566  45654

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=97.84  E-value=1e-05  Score=66.12  Aligned_cols=90  Identities=20%  Similarity=0.104  Sum_probs=55.1

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCC-HHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFN-EDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTT  186 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~-~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T  186 (212)
                      .+++.+|+|+||||+++...  . ..+ ..|. +...+.-...-...+.||+.+||+++++. ++++++|+.++...+  
T Consensus        26 ~~k~~LVLDLD~TLvhs~~~--~-~~~-~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~--   98 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSSFK--P-ISN-ADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKYAD--   98 (195)
T ss_dssp             TTCCEEEECCBTTTEEEESS--C-CTT-CSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHH--
T ss_pred             CCCeEEEEccccceEccccc--C-CCC-ccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHH--
Confidence            47899999999999986310  0 000 0000 00000000001246789999999999998 999999999987655  


Q ss_pred             HHHHHHCCCCCCC-eEEeec
Q 028215          187 EKNLLFAGYSDWK-KLFLRY  205 (212)
Q Consensus       187 ~~nL~~~G~~~~~-~Lilr~  205 (212)
                       ..|...|...+. ..+.|.
T Consensus        99 -~vl~~ld~~~~f~~~l~rd  117 (195)
T 2hhl_A           99 -PVADLLDRWGVFRARLFRE  117 (195)
T ss_dssp             -HHHHHHCCSSCEEEEECGG
T ss_pred             -HHHHHhCCcccEEEEEEcc
Confidence             455556666553 344443

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=97.74  E-value=3.4e-05  Score=61.35  Aligned_cols=43  Identities=7%  Similarity=0.038  Sum_probs=33.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ..++.|++.++++.++.   +++++|+.+...   ....+++.|+..+.
T Consensus        85 ~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~---~~~~l~~~~l~~~~  127 (229)
T 2fdr_A           85 DVKIIDGVKFALSRLTT---PRCICSNSSSHR---LDMMLTKVGLKPYF  127 (229)
T ss_dssp             HCCBCTTHHHHHHHCCS---CEEEEESSCHHH---HHHHHHHTTCGGGT
T ss_pred             CCccCcCHHHHHHHhCC---CEEEEECCChhH---HHHHHHhCChHHhc
Confidence            45788999999988864   899999987653   34677788887653

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=97.68  E-value=2.7e-05  Score=62.60  Aligned_cols=91  Identities=18%  Similarity=0.078  Sum_probs=55.2

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCC-HHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFN-EDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNT  185 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~-~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~  185 (212)
                      ..+++.+|+|+||||+++....   ..+ ..|. +...+.........+.||+.+||+++.+. ++++++|+.++...+.
T Consensus        12 ~~~k~~LVLDLD~TLvhs~~~~---~~~-~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~   86 (181)
T 2ght_A           12 DSDKICVVINLDETLVHSSFKP---VNN-ADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADP   86 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSC---CSS-CSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHH
T ss_pred             cCCCeEEEECCCCCeECCcccC---CCC-ccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHH
Confidence            3578999999999999863210   000 0000 00000000001246799999999999998 9999999999876654


Q ss_pred             HHHHHHHCCCCCC-CeEEeec
Q 028215          186 TEKNLLFAGYSDW-KKLFLRY  205 (212)
Q Consensus       186 T~~nL~~~G~~~~-~~Lilr~  205 (212)
                         .|...|..++ ...+.|.
T Consensus        87 ---vl~~ld~~~~f~~~~~rd  104 (181)
T 2ght_A           87 ---VADLLDKWGAFRARLFRE  104 (181)
T ss_dssp             ---HHHHHCTTCCEEEEECGG
T ss_pred             ---HHHHHCCCCcEEEEEecc
Confidence               4455565554 3444454

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=97.62  E-value=2.2e-05  Score=68.00  Aligned_cols=45  Identities=13%  Similarity=0.191  Sum_probs=37.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..++.||+.++++.|+++|++++++||....   .+...+++.|+..+
T Consensus       176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~---~~~~~~~~lgl~~~  220 (335)
T 3n28_A          176 TLPLMPELPELVATLHAFGWKVAIASGGFTY---FSDYLKEQLSLDYA  220 (335)
T ss_dssp             TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHHTCSEE
T ss_pred             hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHH---HHHHHHHHcCCCeE
Confidence            5689999999999999999999999998764   34456777888754

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=97.54  E-value=0.00023  Score=63.84  Aligned_cols=40  Identities=10%  Similarity=0.149  Sum_probs=33.1

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          154 ALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       154 ~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      +.||+++++++|+++|++++++||..+..   +....+..|+.
T Consensus       222 ~~p~~~eLi~~L~~~G~~v~IVSgg~~~~---v~~ia~~lg~~  261 (385)
T 4gxt_A          222 TLDEMVDLYRSLEENGIDCYIVSASFIDI---VRAFATDTNNN  261 (385)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEEEEEHHH---HHHHHHCTTSS
T ss_pred             eCHHHHHHHHHHHHCCCeEEEEcCCcHHH---HHHHHHHhCcc
Confidence            58999999999999999999999998854   33566666653

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=97.49  E-value=6.8e-05  Score=66.01  Aligned_cols=45  Identities=9%  Similarity=0.231  Sum_probs=34.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHH-CCCCC
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLF-AGYSD  197 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~-~G~~~  197 (212)
                      ...|++++|+++|+++|++++++|+.++...+.....+.- .|++.
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~  188 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKP  188 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCH
Confidence            4789999999999999999999999998755533333322 56663

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=97.46  E-value=0.00024  Score=63.74  Aligned_cols=94  Identities=10%  Similarity=0.133  Sum_probs=57.3

Q ss_pred             CCCceEEEecCCCCCCChh-----hHhhhcCCCC-CCCH-HHHHHHH---------HhcCCCCChhHHHHHHHHHHCCCe
Q 028215          108 DGKDAWVFDIDETLLSNLP-----YYAAHGFGSE-IFNE-DAFDEWV---------DLAKAPALPASLTFYKELKQLGFK  171 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~-----~~~~~~~g~~-~~~~-~~~~~wv---------~~~~~~~~pg~lell~~Lk~~G~k  171 (212)
                      .+++++|||+||||+++..     -|.+  .+.+ +++. +....+.         ..-.....||+.+||+++. ++++
T Consensus        16 ~~k~~LVlDLD~TLvhS~~~~~~~~w~~--~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~-~~ye   92 (372)
T 3ef0_A           16 EKRLSLIVDLDQTIIHATVDPTVGEWMS--DPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYE   92 (372)
T ss_dssp             HTCEEEEECCBTTTEEEECCTHHHHHHT--CTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH-TTEE
T ss_pred             CCCCEEEEcCCCCcccccCcCccchhhc--cCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh-cCcE
Confidence            4789999999999998731     1111  1100 0000 0000000         0012456899999999998 8899


Q ss_pred             EEEEcCCChhchHHHHHHHHHCC-CCCCCeEEeec
Q 028215          172 IFLLTGRNEFQRNTTEKNLLFAG-YSDWKKLFLRY  205 (212)
Q Consensus       172 I~~vTgR~~~~~~~T~~nL~~~G-~~~~~~Lilr~  205 (212)
                      |++.|+......+...+.|...| +-. .+++-|.
T Consensus        93 ivI~Tas~~~yA~~vl~~LDp~~~~f~-~ri~sr~  126 (372)
T 3ef0_A           93 LHIYTMGTKAYAKEVAKIIDPTGKLFQ-DRVLSRD  126 (372)
T ss_dssp             EEEECSSCHHHHHHHHHHHCTTSCSSS-SCEECTT
T ss_pred             EEEEeCCcHHHHHHHHHHhccCCceee-eEEEEec
Confidence            99999999988776666665554 211 2455464

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=97.34  E-value=0.00036  Score=61.29  Aligned_cols=79  Identities=20%  Similarity=0.198  Sum_probs=55.9

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTT  186 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T  186 (212)
                      ..+++.+|+|+||||+++..-  .          ..|       .....||+.+||+++. ++|.|++-|+......+..
T Consensus       137 ~~~k~tLVLDLDeTLvh~~~~--~----------~~~-------~~~~RP~l~eFL~~l~-~~yeivIfTas~~~ya~~v  196 (320)
T 3shq_A          137 REGKKLLVLDIDYTLFDHRSP--A----------ETG-------TELMRPYLHEFLTSAY-EDYDIVIWSATSMRWIEEK  196 (320)
T ss_dssp             CTTCEEEEECCBTTTBCSSSC--C----------SSH-------HHHBCTTHHHHHHHHH-HHEEEEEECSSCHHHHHHH
T ss_pred             cCCCcEEEEeccccEEccccc--C----------CCc-------ceEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHH
Confidence            457899999999999987420  0          001       1247899999999998 6699999999999877766


Q ss_pred             HHHHHHCCCCCCCeEEeec
Q 028215          187 EKNLLFAGYSDWKKLFLRY  205 (212)
Q Consensus       187 ~~nL~~~G~~~~~~Lilr~  205 (212)
                      .+.|...|...+.+.+.|.
T Consensus       197 ld~Ld~~~~~~~~~~~~r~  215 (320)
T 3shq_A          197 MRLLGVASNDNYKVMFYLD  215 (320)
T ss_dssp             HHHTTCTTCSSCCCCEEEC
T ss_pred             HHHhCCCCCcceeEEEEEc
Confidence            6666544443343334454

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=96.34  E-value=4.3e-05  Score=64.35  Aligned_cols=45  Identities=20%  Similarity=0.277  Sum_probs=36.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      .++.||+.++++.|+++|++++++||.++...   ...+++.|+..+.
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~---~~~~~~~gl~~~f  179 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKV---KELSKELNIQEYY  179 (263)
Confidence            46899999999999999999999999887543   3566777887653

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=97.22  E-value=0.00012  Score=60.46  Aligned_cols=64  Identities=16%  Similarity=0.199  Sum_probs=48.0

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      .+++.+|+|+||||+++..-. .++                 -.....||+.+||+++. ++++|++.|+..+...+...
T Consensus        32 ~~~~tLVLDLDeTLvh~~~~~-~~~-----------------~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl   92 (204)
T 3qle_A           32 QRPLTLVITLEDFLVHSEWSQ-KHG-----------------WRTAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIA   92 (204)
T ss_dssp             CCSEEEEEECBTTTEEEEEET-TTE-----------------EEEEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHH
T ss_pred             CCCeEEEEeccccEEeeeccc-cCc-----------------eeEEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHH
Confidence            467899999999999863210 000                 02468999999999997 78999999999987766544


Q ss_pred             HHH
Q 028215          188 KNL  190 (212)
Q Consensus       188 ~nL  190 (212)
                      +.|
T Consensus        93 ~~L   95 (204)
T 3qle_A           93 EKL   95 (204)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            444

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=96.53  E-value=0.00016  Score=62.62  Aligned_cols=17  Identities=6%  Similarity=0.012  Sum_probs=14.8

Q ss_pred             CCceEEEecCCCCCCCh
Q 028215          109 GKDAWVFDIDETLLSNL  125 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~  125 (212)
                      ..++|+||+||||+++.
T Consensus        20 ~~kli~fDlDGTLld~~   36 (332)
T 1y8a_A           20 QGHMFFTDWEGPWILTD   36 (332)
T ss_dssp             CCCEEEECSBTTTBCCC
T ss_pred             CceEEEEECcCCCcCcc
Confidence            46799999999999874

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=95.71  E-value=0.033  Score=50.92  Aligned_cols=53  Identities=11%  Similarity=0.122  Sum_probs=41.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCC-CCCCCeEEeecC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAG-YSDWKKLFLRYR  206 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G-~~~~~~Lilr~~  206 (212)
                      ....||+.+||+++. ++|+|++.|...+.......+.|...| +-. .+++-|..
T Consensus        82 V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~-~Rl~sRd~  135 (442)
T 3ef1_A           82 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQ-DRVLSRDD  135 (442)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHHCTTSTTTT-TCEECTTT
T ss_pred             EEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhccCCcccc-ceEEEecC
Confidence            456899999999997 779999999999988887788887666 221 34665653

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=95.53  E-value=0.01  Score=53.16  Aligned_cols=45  Identities=20%  Similarity=0.208  Sum_probs=38.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      .+++||+.++|+.|+++|++++++||++...   +...|+++|+..+.
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~---~~~~L~~lgL~~~F  258 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTE---TVVPFENLGLLPYF  258 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCGGGS
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHH---HHHHHHHcCChHhc
Confidence            4788999999999999999999999998753   44677788987764

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=91.34  E-value=0.22  Score=44.42  Aligned_cols=21  Identities=24%  Similarity=0.433  Sum_probs=17.6

Q ss_pred             CceEEEecCCCCCCChhhHhh
Q 028215          110 KDAWVFDIDETLLSNLPYYAA  130 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~  130 (212)
                      .|.|+||+||+++|-.-||.-
T Consensus         1 ~~~~~fdvdgv~~~~~~~~d~   21 (384)
T 1qyi_A            1 MKKILFDVDGVFLSEERCFDV   21 (384)
T ss_dssp             CCEEEECSBTTTBCSHHHHHH
T ss_pred             CceEEEecCceeechhhhccH
Confidence            478999999999998777653

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=90.88  E-value=0.71  Score=38.64  Aligned_cols=46  Identities=17%  Similarity=0.244  Sum_probs=38.3

Q ss_pred             hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCC
Q 028215          149 LAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSD  197 (212)
Q Consensus       149 ~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~  197 (212)
                      ....++.||+.++++.|+++|++++++||-..   ..+..-++++|+..
T Consensus       137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~---~~i~~i~~~~g~~~  182 (297)
T 4fe3_A          137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIG---DVLEEVIRQAGVYH  182 (297)
T ss_dssp             TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEH---HHHHHHHHHTTCCC
T ss_pred             hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHHHcCCCc
Confidence            34689999999999999999999999999644   45556778889874

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=85.04  E-value=1.1  Score=42.53  Aligned_cols=43  Identities=21%  Similarity=0.160  Sum_probs=35.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      ..++.|++.+.+++|+++|++++++||++....   ..-.++.|+.
T Consensus       455 ~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a---~~ia~~lgi~  497 (645)
T 3j08_A          455 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSA---EAISRELNLD  497 (645)
T ss_dssp             ECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHHHTCS
T ss_pred             cCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHHcCCC
Confidence            357889999999999999999999999997533   3455666776

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=84.16  E-value=1.1  Score=44.72  Aligned_cols=43  Identities=12%  Similarity=0.173  Sum_probs=35.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      ..|+.|++.+.+++|++.|++++++|||+.....   .-.++.|+.
T Consensus       602 ~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~---~ia~~lgi~  644 (1034)
T 3ixz_A          602 IDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAK---AIAASVGII  644 (1034)
T ss_pred             cCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHH---HHHHHcCCC
Confidence            4689999999999999999999999999875322   344566774

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=81.94  E-value=1.5  Score=43.67  Aligned_cols=43  Identities=16%  Similarity=0.175  Sum_probs=34.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      ..|+.|++.+.+++|++.|++++++||+......   .-.++.|+.
T Consensus       597 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~---~ia~~lgi~  639 (1028)
T 2zxe_A          597 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK---AIAKGVGII  639 (1028)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHH---HHHHHHTSS
T ss_pred             CCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHH---HHHHHcCCC
Confidence            4688999999999999999999999999875433   333455775

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=81.80  E-value=1.7  Score=41.62  Aligned_cols=43  Identities=19%  Similarity=0.139  Sum_probs=35.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYS  196 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~  196 (212)
                      ..++.|++.+.++.|+++|++++++||++.....   .-.++.|+.
T Consensus       533 ~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~---~ia~~lgi~  575 (723)
T 3j09_A          533 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAE---AISRELNLD  575 (723)
T ss_dssp             ECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHH---HHHHHHTCS
T ss_pred             cCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHH---HHHHHcCCc
Confidence            3578999999999999999999999999875333   445566776

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=80.93  E-value=1.3  Score=41.40  Aligned_cols=38  Identities=18%  Similarity=0.180  Sum_probs=30.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHH
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL  190 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL  190 (212)
                      ..+-|.+..+|++|++.| |++++||++....+.....|
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yl  282 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYL  282 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHH
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHh
Confidence            345679999999999999 99999999987666555555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	212
d2b82a1	209	c.108.1.12 (A:4-212) Class B acid phosphatase, Aph	3e-19
d1ltqa1	149	c.108.1.9 (A:153-301) Polynucleotide kinase, phosp	5e-07

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} Length = 209

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

 Score = 80.0 bits (197), Expect = 3e-19
 Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 11/109 (10%)

Query: 107 GDGKDAWVFDIDETLLSNLPYYAAHGFG------SEIFNEDAFDEWVDL--AKAPALPAS 158
           G    A  FDID+T+L + P +              + N   +++  +     +     +
Sbjct: 32  GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVA 91

Query: 159 LTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL---LFAGYSDWKKLFLR 204
                   + G  IF +TGR+  +  T  K L        ++   +   
Sbjct: 92  RQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFA 140

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} Length = 149

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

 Score = 45.5 bits (107), Expect = 5e-07
 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 14/79 (17%)

Query: 112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFK 171
           A +FD+D TL                 N     +          P  +   K    +G++
Sbjct: 9   AVIFDVDGTLAKM--------------NGRGPYDLEKCDTDVINPMVVELSKMYALMGYQ 54

Query: 172 IFLLTGRNEFQRNTTEKNL 190
           I +++GR    +    K  
Sbjct: 55  IVVVSGRESGTKEDPTKYY 73

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	212
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	99.77
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.54
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	99.37
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	99.23
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.07
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.06
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	98.92
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	98.92
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	98.85
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.78
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	98.77
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	98.72
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	98.71
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	98.7
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	98.69
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	98.61
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.6
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	98.57
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	98.56
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	98.56
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	98.55
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	98.54
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	98.53
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	98.48
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.48
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	98.43
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	98.41
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	98.4
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.39
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	98.39
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	98.38
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	98.38
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	98.37
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	98.34
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	98.27
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	98.27
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	98.25
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	98.24
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	98.21
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	98.11
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	97.99
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	97.99
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.97
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	97.96
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.96
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	97.95
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	97.93
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	97.45
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	97.4
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	97.17
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	96.81
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	96.78
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	96.11
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	96.04
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	95.94
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	95.5
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	95.36
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	81.99

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=9.6e-20  Score=150.21  Aligned_cols=101  Identities=22%  Similarity=0.186  Sum_probs=82.0

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhh--cCC--CC--CCCHHHHHHHHHh--cCCCCChhHHHHHHHHHHCCCeEEEEcCC
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAH--GFG--SE--IFNEDAFDEWVDL--AKAPALPASLTFYKELKQLGFKIFLLTGR  178 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~--~~g--~~--~~~~~~~~~wv~~--~~~~~~pg~lell~~Lk~~G~kI~~vTgR  178 (212)
                      +.++.|||||||+|+|||+||+...  .+.  +.  .++++.|..|...  ..+.|+||+++|+++++++|++|+|+|||
T Consensus        32 g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR  111 (209)
T d2b82a1          32 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGR  111 (209)
T ss_dssp             TCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECS
T ss_pred             CCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeCC
Confidence            3456699999999999999986642  222  11  3478899998874  55788999999999999999999999999


Q ss_pred             ChhchHHHHHHHHH-CCCCCC--CeEEeecCC
Q 028215          179 NEFQRNTTEKNLLF-AGYSDW--KKLFLRYRN  207 (212)
Q Consensus       179 ~~~~~~~T~~nL~~-~G~~~~--~~Lilr~~~  207 (212)
                      ++.+++.|.+||.+ +|++..  .++++++.+
T Consensus       112 ~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~  143 (209)
T d2b82a1         112 SPTKTETVSKTLADNFHIPATNMNPVIFAGDK  143 (209)
T ss_dssp             CCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC
T ss_pred             chhhHHHHHHHHHHHcCCCcccccceEeeCCC
Confidence            99999999999966 899854  467777654

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.54  E-value=1.8e-15  Score=115.18  Aligned_cols=87  Identities=17%  Similarity=0.218  Sum_probs=68.1

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      .++++||||+||||+++.+.        ..|      .|.....+.++||+.++++.|+++|++|+++|||++..++.|.
T Consensus         5 ~kpk~vifDiDgTL~~~~~~--------~~~------~~~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~   70 (149)
T d1ltqa1           5 GKPKAVIFDVDGTLAKMNGR--------GPY------DLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPT   70 (149)
T ss_dssp             TSCEEEEEETBTTTBCCSSC--------CTT------CGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTT
T ss_pred             CCCcEEEEEcCCCcEeCCCC--------CcC------CccccccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHH
Confidence            47899999999999987542        112      2334456789999999999999999999999999998888898


Q ss_pred             HHHHHC--------CCCCCCeEEeecCCCc
Q 028215          188 KNLLFA--------GYSDWKKLFLRYRNRY  209 (212)
Q Consensus       188 ~nL~~~--------G~~~~~~Lilr~~~~~  209 (212)
                      +||+..        +.+ +..+.+++.++.
T Consensus        71 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~   99 (149)
T d1ltqa1          71 KYYRMTRKWVEDIAGVP-LVMQCQREQGDT   99 (149)
T ss_dssp             HHHHHHHHHHHHTTCCC-CSEEEECCTTCC
T ss_pred             HHHHHHhhhhhhcCCCc-EEEeeccccccc
Confidence            998763        333 567777776654

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=99.37  E-value=8.6e-13  Score=99.96  Aligned_cols=76  Identities=18%  Similarity=0.197  Sum_probs=63.2

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCC----------
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRN----------  179 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~----------  179 (212)
                      .+.++|||||||..+..-         .|           ..+.|++++.++++.|++.|++|++.|+|.          
T Consensus         1 mK~i~~DiDGTI~~~~~~---------~y-----------~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~   60 (124)
T d1xpja_           1 MKKLIVDLDGTLTQANTS---------DY-----------RNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGK   60 (124)
T ss_dssp             CCEEEECSTTTTBCCCCS---------CG-----------GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHH
T ss_pred             CCEEEEeCCCCeECCCCC---------Cc-----------CccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHH
Confidence            368999999999875320         01           235899999999999999999999999995          


Q ss_pred             --hhchHHHHHHHHHCCCCCCCeEEeecC
Q 028215          180 --EFQRNTTEKNLLFAGYSDWKKLFLRYR  206 (212)
Q Consensus       180 --~~~~~~T~~nL~~~G~~~~~~Lilr~~  206 (212)
                        ...++.|.+||++.|++ |++|+|..|
T Consensus        61 ~~~~~~~~T~~wL~~~gI~-Yd~Li~gKP   88 (124)
T d1xpja_          61 INIHTLPIITEWLDKHQVP-YDEILVGKP   88 (124)
T ss_dssp             HHHHTHHHHHHHHHHTTCC-CSEEEECCC
T ss_pred             HHHHHHHHHHHHHHHcCCC-ceEEEECCC
Confidence              44678999999999998 999999654

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.23  E-value=8.4e-12  Score=94.09  Aligned_cols=67  Identities=15%  Similarity=0.120  Sum_probs=57.7

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHH
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL  191 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~  191 (212)
                      .++|||||||.++..       .               ....|+|++.++++.|+++|++|++.|+|+...++.|++||+
T Consensus         2 ti~vDiDGTl~~~~~-------~---------------~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~   59 (122)
T d2obba1           2 TIAVDFDGTIVEHRY-------P---------------RIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCR   59 (122)
T ss_dssp             EEEECCBTTTBCSCT-------T---------------SCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHH
T ss_pred             EEEEEcCCCcCCCCC-------C---------------ccccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHH
Confidence            589999999986521       0               124799999999999999999999999999999999999999


Q ss_pred             HCCCCCCCeE
Q 028215          192 FAGYSDWKKL  201 (212)
Q Consensus       192 ~~G~~~~~~L  201 (212)
                      ++|++ |+.+
T Consensus        60 ~~~i~-yd~i   68 (122)
T d2obba1          60 ARGLE-FYAA   68 (122)
T ss_dssp             TTTCC-CSEE
T ss_pred             HcCCC-ceeh
Confidence            99999 5554

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.07  E-value=1.2e-10  Score=91.69  Aligned_cols=49  Identities=14%  Similarity=0.146  Sum_probs=41.1

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ...+.||+.++++.|+++|++++++||+++.    +.+.|+++|+..|...++
T Consensus        80 ~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~----~~~~l~~~gl~~~f~~i~  128 (204)
T d2go7a1          80 QVVLMPGAREVLAWADESGIQQFIYTHKGNN----AFTILKDLGVESYFTEIL  128 (204)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCTH----HHHHHHHHTCGGGEEEEE
T ss_pred             cCcccchHHhhhhcccccccchhhhcccchh----hhhhhhhccccccccccc
Confidence            4677899999999999999999999998763    345688999998866555

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.06  E-value=4.4e-10  Score=88.88  Aligned_cols=50  Identities=20%  Similarity=0.119  Sum_probs=41.3

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..+++||+.++++.|+++|++++++||+++..   +...++..|+..|..-+.
T Consensus        86 ~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~---~~~~l~~~~l~~~F~~i~  135 (218)
T d1te2a_          86 TRPLLPGVREAVALCKEQGLLVGLASASPLHM---LEKVLTMFDLRDSFDALA  135 (218)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHTTCGGGCSEEE
T ss_pred             cccccchHHHHHHHhhhccccccccccccccc---cccccccccccccccccc
Confidence            45789999999999999999999999997753   457888999987654333

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=98.92  E-value=1.6e-09  Score=85.31  Aligned_cols=50  Identities=14%  Similarity=0.131  Sum_probs=41.3

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ....+.||+.++++.|+++|++++++||.+...   ....|+++|+..+..-+
T Consensus        92 ~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~---~~~~l~~~gl~~~f~~~  141 (224)
T d2hsza1          92 NISRLYPNVKETLEALKAQGYILAVVTNKPTKH---VQPILTAFGIDHLFSEM  141 (224)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHTTCGGGCSEE
T ss_pred             cccchHHHHHHHHHHHhccCCcccccccccHHH---HHHHHHhcCchhhcccc
Confidence            356789999999999999999999999998753   44678999998765433

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.92  E-value=2.7e-09  Score=83.21  Aligned_cols=90  Identities=17%  Similarity=0.238  Sum_probs=61.2

Q ss_pred             CCceEEEecCCCCCCChhhHhh------hcCCCCCCCH--------------------------HHHHHHHH--hcCCCC
Q 028215          109 GKDAWVFDIDETLLSNLPYYAA------HGFGSEIFNE--------------------------DAFDEWVD--LAKAPA  154 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~------~~~g~~~~~~--------------------------~~~~~wv~--~~~~~~  154 (212)
                      +.++||||+||||+|+.+.+..      ..+|. +++.                          +.+.+...  ....++
T Consensus         2 ~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (187)
T d2fi1a1           2 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGI-TQDHDSVYQALKVSTPFAIETFAPNLENFLEKYKENEARELEHPIL   80 (187)
T ss_dssp             CCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHCHHHHHHHHCTTCTTHHHHHHHHHHHHTTSCCB
T ss_pred             CCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCC-CccHHHHHhhhhccchhhhhhhhHHHHHHHHHHHHHHHHHhhcCcc
Confidence            3689999999999997765443      11221 1111                          11111111  145688


Q ss_pred             ChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          155 LPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       155 ~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      +||+.++++.|+++|++++++||+++.    +.+.|++.|+..+..-+.
T Consensus        81 ~~gv~~~l~~l~~~g~~~~i~Sn~~~~----~~~~l~~~~l~~~fd~i~  125 (187)
T d2fi1a1          81 FEGVSDLLEDISNQGGRHFLVSHRNDQ----VLEILEKTSIAAYFTEVV  125 (187)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCTH----HHHHHHHTTCGGGEEEEE
T ss_pred             cchhHHHHHHHHhhhccccccccCccc----hhhhhhhhcccccccccc
Confidence            999999999999999999999998763    334688899887654443

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=4.3e-10  Score=86.96  Aligned_cols=88  Identities=18%  Similarity=0.093  Sum_probs=57.5

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHH---HHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEW---VDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNT  185 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~w---v~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~  185 (212)
                      -||+||||+||||+++....  +  ...++... .+.-   .......++||+.++|++|+++|++++++|++++..  .
T Consensus         4 ~pK~viFDlDGTL~d~~~~~--~--~~~~~~~~-~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~--~   76 (164)
T d1u7pa_           4 LPKLAVFDLDYTLWPFWVDT--H--VDPPFHKS-SDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQ--G   76 (164)
T ss_dssp             CCSEEEECCBTTTBSSCTTT--T--CCSCEEEC-TTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHH--H
T ss_pred             CCCEEEEcCCCcccCCcccc--c--cCccHhHH-hcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccch--h
Confidence            47899999999999874321  1  11111000 0000   001235889999999999999999999999987642  3


Q ss_pred             HHHHHHHCCCCCCCeEEe
Q 028215          186 TEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       186 T~~nL~~~G~~~~~~Lil  203 (212)
                      ....++.+++..+...+.
T Consensus        77 ~~~~l~~~~~~~~~~~~~   94 (164)
T d1u7pa_          77 ANQLLELFDLGKYFIQRE   94 (164)
T ss_dssp             HHHHHHHTTCGGGCSEEE
T ss_pred             hccchhcccccccceeee
Confidence            345678888887665443

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=8.5e-09  Score=82.91  Aligned_cols=47  Identities=13%  Similarity=0.092  Sum_probs=39.4

Q ss_pred             hcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          149 LAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       149 ~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      +....+.||+.+++++|+++|++++++||..+..   ....++.+|++.+
T Consensus        78 ~~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~---v~~i~~~lgi~~~  124 (217)
T d1nnla_          78 EQPPHLTPGIRELVSRLQERNVQVFLISGGFRSI---VEHVASKLNIPAT  124 (217)
T ss_dssp             HSCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHH---HHHHHHHTTCCGG
T ss_pred             hhccccCHHHHHHHHHHHhCCCEEEEECCCchHH---HHHHHHHhCCccc
Confidence            3456788999999999999999999999988754   4467788899854

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=98.77  E-value=4.3e-09  Score=86.02  Aligned_cols=63  Identities=21%  Similarity=0.268  Sum_probs=54.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      ..|+|+||+||||++.                           ..++|++.++++.|+++|++++|+||.+...++...+
T Consensus         2 ~ik~VifDlDGTL~~~---------------------------~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~   54 (250)
T d2c4na1           2 TIKNVICDIDGVLMHD---------------------------NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLAN   54 (250)
T ss_dssp             CCCEEEEECBTTTEET---------------------------TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHH
T ss_pred             CCCEEEEECCCeeEEC---------------------------CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHH
Confidence            3689999999999864                           1567899999999999999999999988777777778


Q ss_pred             HHHHCCCCCC
Q 028215          189 NLLFAGYSDW  198 (212)
Q Consensus       189 nL~~~G~~~~  198 (212)
                      .|++.|++..
T Consensus        55 ~l~~~G~~~~   64 (250)
T d2c4na1          55 RFATAGVDVP   64 (250)
T ss_dssp             HHHHTTCCCC
T ss_pred             HHhhcccccc
Confidence            8999998754

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=98.72  E-value=2.4e-08  Score=78.72  Aligned_cols=48  Identities=19%  Similarity=0.152  Sum_probs=39.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ..++.||+.++++.|+++|++++++|++...     ...|+..|+..+...+.
T Consensus        89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~~-----~~~l~~~~l~~~f~~i~  136 (221)
T d1o08a_          89 PADVYPGILQLLKDLRSNKIKIALASASKNG-----PFLLERMNLTGYFDAIA  136 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTTCEEEECCSCTTH-----HHHHHHTTCGGGCSEEC
T ss_pred             cccccCCceeccccccccccceEEEeecchh-----hHHHHhhcccccccccc
Confidence            3578999999999999999999999997542     35678889888755444

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=98.71  E-value=5.3e-09  Score=82.23  Aligned_cols=90  Identities=17%  Similarity=0.297  Sum_probs=60.8

Q ss_pred             CceEEEecCCCCCCChhhHhh------hcCCCC---------------------CCCHHHH-------HHHHHh--cCCC
Q 028215          110 KDAWVFDIDETLLSNLPYYAA------HGFGSE---------------------IFNEDAF-------DEWVDL--AKAP  153 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~------~~~g~~---------------------~~~~~~~-------~~wv~~--~~~~  153 (212)
                      .++|+||+||||+|+.+.+..      ..+|..                     ......+       .++...  ...+
T Consensus         3 ~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (207)
T d2hdoa1           3 YQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTELGIAASEFDHFQAQYEDVMASHYDQIE   82 (207)
T ss_dssp             CSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHHTTCCGGGHHHHHHHHHHHHTTCGGGCE
T ss_pred             CcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhhhhhccccchhhHHHHHHHhhhhhcccccccc
Confidence            589999999999999886543      123311                     0111111       122111  3567


Q ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEEe
Q 028215          154 ALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLFL  203 (212)
Q Consensus       154 ~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Lil  203 (212)
                      ++||+.++++.|++ +++++++||.+..   .....|+++|+..+...+.
T Consensus        83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~---~~~~~l~~~~l~~~f~~i~  128 (207)
T d2hdoa1          83 LYPGITSLFEQLPS-ELRLGIVTSQRRN---ELESGMRSYPFMMRMAVTI  128 (207)
T ss_dssp             ECTTHHHHHHHSCT-TSEEEEECSSCHH---HHHHHHTTSGGGGGEEEEE
T ss_pred             cccchhhhhhhhcc-ccccccccccccc---ccccccccccccccccccc
Confidence            89999999999975 6999999998764   4557888889887654443

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=98.70  E-value=8.8e-09  Score=84.14  Aligned_cols=63  Identities=22%  Similarity=0.355  Sum_probs=54.8

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTE  187 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~  187 (212)
                      ++.++|+||+||||++..                           +++|++.++++.|+++|.+++++||+....+....
T Consensus         5 ~~ik~vlFDlDGTL~~~~---------------------------~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~   57 (261)
T d1vjra_           5 DKIELFILDMDGTFYLDD---------------------------SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYV   57 (261)
T ss_dssp             GGCCEEEECCBTTTEETT---------------------------EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHH
T ss_pred             HhCCEEEEeCCCeeEECC---------------------------ccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHH
Confidence            357899999999999751                           56799999999999999999999998877777788


Q ss_pred             HHHHHCCCCC
Q 028215          188 KNLLFAGYSD  197 (212)
Q Consensus       188 ~nL~~~G~~~  197 (212)
                      +.+...|++.
T Consensus        58 ~~~~~~g~~~   67 (261)
T d1vjra_          58 RKLRNMGVDV   67 (261)
T ss_dssp             HHHHHTTCCC
T ss_pred             HHHHhhcccc
Confidence            8899999864

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=98.69  E-value=5.8e-08  Score=78.42  Aligned_cols=44  Identities=18%  Similarity=0.069  Sum_probs=35.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSD  197 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~  197 (212)
                      ...++||+.++|+.|+++|++++++||.++.....   .|+.+|+..
T Consensus        97 ~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~---~l~~~~l~~  140 (257)
T d1swva_          97 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDI---VAKEAALQG  140 (257)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHH---HHHHHHHTT
T ss_pred             cCccCCcHHHHHHHHHhcccceeecCCCchhhHHH---HHHHHhhcc
Confidence            45799999999999999999999999998865553   445545544

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.61  E-value=2.4e-08  Score=78.06  Aligned_cols=90  Identities=14%  Similarity=0.197  Sum_probs=59.9

Q ss_pred             CCceEEEecCCCCCCChhhHhh------hcCCCC---------------------CCCHHHH-------HHHHH---hcC
Q 028215          109 GKDAWVFDIDETLLSNLPYYAA------HGFGSE---------------------IFNEDAF-------DEWVD---LAK  151 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~------~~~g~~---------------------~~~~~~~-------~~wv~---~~~  151 (212)
                      +.++|+||+||||+|+.+.+..      ..+|..                     .+..+.+       ..+..   ...
T Consensus         3 ~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (210)
T d2ah5a1           3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQISEAVQIYRSYYKAKGIYE   82 (210)
T ss_dssp             TCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTTSCGGGHHHHHHHHHHHHHHTGGGS
T ss_pred             CCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhccccccchhhHHHHHHHHHHHHhhhhhc
Confidence            5789999999999998775432      112210                     1111111       12222   135


Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      .++.||+.++++.|+.+| +++++|+.++....   ..|+++|+..|...+
T Consensus        83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~---~~l~~~gl~~~fd~v  129 (210)
T d2ah5a1          83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQ---DMAKNLEIHHFFDGI  129 (210)
T ss_dssp             CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHH---HHHHHTTCGGGCSEE
T ss_pred             ccchhHHHHHHhhhhccc-chhhcccccchhhh---HHHHhhccccccccc
Confidence            678999999999998775 89999998775444   678889998875433

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.60  E-value=7e-08  Score=78.24  Aligned_cols=60  Identities=22%  Similarity=0.148  Sum_probs=48.0

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      .+|.|+||+||||++..                          -.+.|.+.+.+++|+++|++++++|||+.....   +
T Consensus         3 ~iKli~~DlDGTL~~~~--------------------------~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~---~   53 (271)
T d1rkqa_           3 AIKLIAIDMDGTLLLPD--------------------------HTISPAVKNAIAAARARGVNVVLTTGRPYAGVH---N   53 (271)
T ss_dssp             CCCEEEECCCCCCSCTT--------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTH---H
T ss_pred             CeeEEEEeCCccccCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHH---H
Confidence            36889999999999741                          145588999999999999999999999976444   4


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      .++..++..
T Consensus        54 ~~~~l~l~~   62 (271)
T d1rkqa_          54 YLKELHMEQ   62 (271)
T ss_dssp             HHHHTTCCS
T ss_pred             HHHHhcCcC
Confidence            566777764

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=98.57  E-value=5.4e-08  Score=76.28  Aligned_cols=59  Identities=14%  Similarity=0.122  Sum_probs=46.2

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      |..|++||||||+++.                          ....+.+.+.+++|+++|++++++|||+...   ..+.
T Consensus         4 ~~li~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~---~~~~   54 (232)
T d1xvia_           4 PLLVFSDLDGTLLDSH--------------------------SYDWQPAAPWLTRLREANVPVILCSSKTSAE---MLYL   54 (232)
T ss_dssp             CEEEEEECTTTTSCSS--------------------------CCSCCTTHHHHHHHHHTTCCEEEECSSCHHH---HHHH
T ss_pred             CEEEEEECCCCccCCc--------------------------CcCCHHHHHHHHHHHHCCCEEEEEeCCChhh---chhH
Confidence            4567889999999752                          1345678999999999999999999999754   3356


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      +...|+..
T Consensus        55 ~~~~~~~~   62 (232)
T d1xvia_          55 QKTLGLQG   62 (232)
T ss_dssp             HHHTTCTT
T ss_pred             HHHhccCC
Confidence            67777754

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.56  E-value=4.1e-08  Score=77.82  Aligned_cols=57  Identities=21%  Similarity=0.274  Sum_probs=45.0

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      +|.+++||||||+++.                            ..+.+.+.+++|+++|++++++|||+...   +...
T Consensus         2 iKli~~DlDGTLl~~~----------------------------~~~~~~~ai~~l~~~G~~~~~aTGR~~~~---~~~~   50 (243)
T d1wzca1           2 IRLIFLDIDKTLIPGY----------------------------EPDPAKPIIEELKDMGFEIIFNSSKTRAE---QEYY   50 (243)
T ss_dssp             EEEEEECCBTTTBSSS----------------------------CSGGGHHHHHHHHHTTEEEEEECSSCHHH---HHHH
T ss_pred             cEEEEEeCCCCCCCCC----------------------------CCHHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHH
Confidence            5789999999999641                            12457899999999999999999999753   4456


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      ++..|+..
T Consensus        51 ~~~~~~~~   58 (243)
T d1wzca1          51 RKELEVET   58 (243)
T ss_dssp             HHHHTCCS
T ss_pred             HHHhcccc
Confidence            67777764

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.56  E-value=5.7e-08  Score=79.21  Aligned_cols=60  Identities=20%  Similarity=0.308  Sum_probs=48.3

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .|.|+|||||||++..                          ..+-+.+.+.+++|+++|++++++|||+...   +..-
T Consensus         1 iKli~~DlDGTLl~~~--------------------------~~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~---~~~~   51 (285)
T d1nrwa_           1 MKLIAIDLDGTLLNSK--------------------------HQVSLENENALRQAQRDGIEVVVSTGRAHFD---VMSI   51 (285)
T ss_dssp             CCEEEEECCCCCSCTT--------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHH
T ss_pred             CeEEEEECCccccCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHH
Confidence            3689999999999641                          1345889999999999999999999998753   4467


Q ss_pred             HHHCCCCCC
Q 028215          190 LLFAGYSDW  198 (212)
Q Consensus       190 L~~~G~~~~  198 (212)
                      ++..|++.+
T Consensus        52 ~~~l~~~~~   60 (285)
T d1nrwa_          52 FEPLGIKTW   60 (285)
T ss_dssp             HGGGTCCCE
T ss_pred             HHHhCCCcE
Confidence            777787753

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.55  E-value=6.2e-08  Score=75.98  Aligned_cols=60  Identities=23%  Similarity=0.230  Sum_probs=46.1

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEK  188 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~  188 (212)
                      +.|+|+||+||||+++.                          ..+.+.+.+.+++|+++|++++++|||+.....   .
T Consensus         1 kiK~i~~D~DGTL~~~~--------------------------~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~---~   51 (230)
T d1wr8a_           1 KIKAISIDIDGTITYPN--------------------------RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAE---A   51 (230)
T ss_dssp             CCCEEEEESTTTTBCTT--------------------------SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHH---H
T ss_pred             CceEEEEecCCCCcCCC--------------------------CccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHH---H
Confidence            46899999999999752                          145688899999999999999999999975444   3


Q ss_pred             HHHHCCCCC
Q 028215          189 NLLFAGYSD  197 (212)
Q Consensus       189 nL~~~G~~~  197 (212)
                      -+...++..
T Consensus        52 ~~~~~~~~~   60 (230)
T d1wr8a_          52 ASILIGTSG   60 (230)
T ss_dssp             HHHHHTCCS
T ss_pred             HHHhcCCCc
Confidence            334445543

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.54  E-value=4.4e-08  Score=77.76  Aligned_cols=49  Identities=18%  Similarity=0.177  Sum_probs=40.5

Q ss_pred             CCCCChhHHHHHHHHHHCC-CeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          151 KAPALPASLTFYKELKQLG-FKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G-~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..+++||+.++|+.|+++| ++++++||.+..   .....|+..|+..|...+
T Consensus        89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~---~~~~~l~~~gl~~~fd~i  138 (228)
T d2hcfa1          89 DITLLEGVRELLDALSSRSDVLLGLLTGNFEA---SGRHKLKLPGIDHYFPFG  138 (228)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSCHH---HHHHHHHTTTCSTTCSCE
T ss_pred             CceecCchHHHHhhhhccccccccccCCCcch---hhhhhhhhhccccccccc
Confidence            4578999999999999997 899999999875   445788999998875443

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.53  E-value=3.4e-08  Score=80.38  Aligned_cols=60  Identities=17%  Similarity=0.291  Sum_probs=48.5

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .++|+||+||||++..                           .++|++.+.++.|++.|++++++||++...+....+.
T Consensus         2 yk~v~fDlDGTL~~~~---------------------------~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~   54 (253)
T d1yv9a1           2 YQGYLIDLDGTIYLGK---------------------------EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR   54 (253)
T ss_dssp             CCEEEECCBTTTEETT---------------------------EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred             CCEEEEcCCCccEeCC---------------------------CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence            4799999999999741                           4679999999999999999999999887666666666


Q ss_pred             HHH-CCCC
Q 028215          190 LLF-AGYS  196 (212)
Q Consensus       190 L~~-~G~~  196 (212)
                      |.. .|+.
T Consensus        55 L~~~~~~~   62 (253)
T d1yv9a1          55 LANEFDIH   62 (253)
T ss_dssp             HHHHSCCC
T ss_pred             HHHhcCCc
Confidence            654 4554

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=98.48  E-value=1.1e-07  Score=76.71  Aligned_cols=71  Identities=15%  Similarity=0.127  Sum_probs=50.8

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCCh-------
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNE-------  180 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~-------  180 (212)
                      .+.+|++||.||||..+.+|..         +++         +..++||+.++|++|+++|++++++||.+.       
T Consensus        21 ~~~~Aif~DrDGtl~~~~~y~~---------~~~---------~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~   82 (209)
T d2o2xa1          21 PHLPALFLDRDGTINVDTDYPS---------DPA---------EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFG   82 (209)
T ss_dssp             SSCCCEEECSBTTTBCCCSCTT---------CGG---------GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCC
T ss_pred             CCCCEEEEeCCCCeECCCCCCC---------CHH---------HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhh
Confidence            3568999999999987643311         122         237899999999999999999999998652       


Q ss_pred             -----hchHHHHHHHHHCCCC
Q 028215          181 -----FQRNTTEKNLLFAGYS  196 (212)
Q Consensus       181 -----~~~~~T~~nL~~~G~~  196 (212)
                           ...+...+.|...|..
T Consensus        83 ~~~~~~~~~~~~~~l~~~g~~  103 (209)
T d2o2xa1          83 WSAFAAVNGRVLELLREEGVF  103 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCC
T ss_pred             hhhhhhhhhHHHHHhhhcccc
Confidence                 1122234556777765

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.48  E-value=3.3e-08  Score=78.25  Aligned_cols=46  Identities=13%  Similarity=0.060  Sum_probs=38.3

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ...++.||+.++++.|+++|++++++|+..+.   .+...|+++|+..+
T Consensus        72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~---~i~~~l~~l~~~~~  117 (226)
T d2feaa1          72 EDAKIREGFREFVAFINEHEIPFYVISGGMDF---FVYPLLEGIVEKDR  117 (226)
T ss_dssp             HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHH---HHHHHHTTTSCGGG
T ss_pred             hccchhHHHHHHHHHHHhcccccccCCcchhh---hHHHHHHHcCCccc
Confidence            35689999999999999999999999998765   44467788887654

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=8.5e-08  Score=75.31  Aligned_cols=47  Identities=23%  Similarity=0.207  Sum_probs=39.1

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      +|++.++|||||||+++.                          ..+.|.+++.+++|+++|+ ++++|||+..
T Consensus         1 ~~~kl~~fDlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~g~-~~i~Tgr~~~   47 (243)
T d2amya1           1 PGPALCLFDVDGTLTAPR--------------------------QKITKEMDDFLQKLRQKIK-IGVVGGSDFE   47 (243)
T ss_dssp             CCSEEEEEESBTTTBCTT--------------------------SCCCHHHHHHHHHHTTTSE-EEEECSSCHH
T ss_pred             CCCEEEEEcCcCCeeCCC--------------------------CcCCHHHHHHHHHHHcCCC-EEEEcCCChH
Confidence            378999999999999751                          1567899999999999885 8899999754

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=98.41  E-value=8.6e-08  Score=74.96  Aligned_cols=53  Identities=23%  Similarity=0.351  Sum_probs=42.3

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCCh
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNE  180 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~  180 (212)
                      .+||+||.||||....+|-         .+++         ...++||+.++++.|+++|++++++||.+.
T Consensus         2 ~~Av~~DrDGtl~~~~~y~---------~~~~---------~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~   54 (182)
T d2gmwa1           2 VPAIFLDRDGTINVDHGYV---------HEID---------NFEFIDGVIDAMRELKKMGFALVVVTNQSG   54 (182)
T ss_dssp             BCEEEECSBTTTBCCCSSC---------CSGG---------GCCBCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred             CCEEEEeCCCCccCCCCCC---------CCHH---------HeeECCCHHHHHHHHhhcCchhhhhhccch
Confidence            5899999999998653321         1122         237899999999999999999999999874

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.40  E-value=1.7e-07  Score=76.07  Aligned_cols=48  Identities=31%  Similarity=0.386  Sum_probs=39.2

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhch
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQR  183 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~  183 (212)
                      |+|+|||||||++..                         ....-+.+.+.+++|+++|++++++|||+....
T Consensus         2 k~if~DlDGTL~~~~-------------------------~~~i~~~~~~al~~l~~~gi~v~~~TGR~~~~~   49 (260)
T d2rbka1           2 KALFFDIDGTLVSFE-------------------------THRIPSSTIEALEAAHAKGLKIFIATGRPKAII   49 (260)
T ss_dssp             CEEEECSBTTTBCTT-------------------------TSSCCHHHHHHHHHHHHTTCEEEEECSSCGGGC
T ss_pred             eEEEEECCCCCcCCC-------------------------CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence            789999999999641                         013456789999999999999999999996543

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.39  E-value=8.9e-08  Score=77.67  Aligned_cols=61  Identities=23%  Similarity=0.235  Sum_probs=45.9

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .|.++||+||||+++..                         ..+.|.+.+.+++|+++|++++++|||+...   +...
T Consensus         2 IKli~~DlDGTLl~~~~-------------------------~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~---~~~~   53 (269)
T d1rlma_           2 VKVIVTDMDGTFLNDAK-------------------------TYNQPRFMAQYQELKKRGIKFVVASGNQYYQ---LISF   53 (269)
T ss_dssp             CCEEEECCCCCCSCTTS-------------------------CCCHHHHHHHHHHHHHHTCEEEEECSSCHHH---HGGG
T ss_pred             EEEEEEeCCccCcCCCC-------------------------cCChHHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHH
Confidence            57899999999997511                         1233678999999999999999999998743   3345


Q ss_pred             HHHCCCCCC
Q 028215          190 LLFAGYSDW  198 (212)
Q Consensus       190 L~~~G~~~~  198 (212)
                      +++.++..|
T Consensus        54 ~~~l~~~~~   62 (269)
T d1rlma_          54 FPELKDEIS   62 (269)
T ss_dssp             CTTTTTTSE
T ss_pred             HHHhCcccc
Confidence            556666643

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=98.39  E-value=2.5e-07  Score=74.80  Aligned_cols=52  Identities=19%  Similarity=0.251  Sum_probs=42.4

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchH
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRN  184 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~  184 (212)
                      ...+.|+||+||||+...                         ...+.|.+++.+++|+++|++++++|||+.....
T Consensus         8 ~~ikli~~DlDGTLl~~~-------------------------~~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~   59 (283)
T d2b30a1           8 ADIKLLLIDFDGTLFVDK-------------------------DIKVPSENIDAIKEAIEKGYMVSICTGRSKVGIL   59 (283)
T ss_dssp             CCCCEEEEETBTTTBCCT-------------------------TTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHH
T ss_pred             cCccEEEEECCCCCcCCC-------------------------CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence            467899999999998431                         1156688999999999999999999999975443

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.38  E-value=2.6e-07  Score=73.31  Aligned_cols=45  Identities=18%  Similarity=0.143  Sum_probs=36.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ..++.||+.++++.|+ +|++++++||.+...   ....|+..|+..+.
T Consensus        98 ~~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~---~~~~l~~~gl~~~f  142 (230)
T d1x42a1          98 YGELYPEVVEVLKSLK-GKYHVGMITDSDTEY---LMAHLDALGIKDLF  142 (230)
T ss_dssp             HCCBCTTHHHHHHHHB-TTBEEEEEESSCHHH---HHHHHHHHTCGGGC
T ss_pred             hCcccccHHHHHHHhh-ccCceeeeecccccc---chhhhccccccccc
Confidence            3578899999999996 579999999987653   44678888998764

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=98.38  E-value=1.6e-07  Score=76.52  Aligned_cols=61  Identities=18%  Similarity=0.282  Sum_probs=47.9

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .|+|+||+||||++.                           ..++|++.++++.|+++|++++++||++....+...+.
T Consensus         2 yk~vlFDlDGTL~~~---------------------------~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~   54 (253)
T d1wvia_           2 YKGYLIDLDGTIYKG---------------------------KDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEM   54 (253)
T ss_dssp             CCEEEEECBTTTEET---------------------------TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHH
T ss_pred             cCEEEEcCcCceEEC---------------------------CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence            479999999999874                           14689999999999999999999999766555555555


Q ss_pred             HHH-CCCCC
Q 028215          190 LLF-AGYSD  197 (212)
Q Consensus       190 L~~-~G~~~  197 (212)
                      |.. .|+..
T Consensus        55 l~~~~~~~~   63 (253)
T d1wvia_          55 LATSFNIKT   63 (253)
T ss_dssp             HHHHHSCCC
T ss_pred             HHhhcCccc
Confidence            543 45553

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=98.37  E-value=8.5e-08  Score=74.37  Aligned_cols=72  Identities=22%  Similarity=0.320  Sum_probs=49.9

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh-----c--
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF-----Q--  182 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~-----~--  182 (212)
                      +|+|+||.||||....++...         ...+      .+..++||+.++|++|+++|++++++|+.+.-     .  
T Consensus         2 ~K~i~~D~DGtL~~~~~~~~~---------~~~~------~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~   66 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPSDFQ---------VDRF------DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQA   66 (161)
T ss_dssp             CEEEEECCBTTTBCCC--CCC---------CCSG------GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHH
T ss_pred             CcEEEEeCCCCeEeeCCCCCc---------cCCH------HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHH
Confidence            689999999999986432110         0001      23478999999999999999999999997521     0  


Q ss_pred             -----hHHHHHHHHHCCCC
Q 028215          183 -----RNTTEKNLLFAGYS  196 (212)
Q Consensus       183 -----~~~T~~nL~~~G~~  196 (212)
                           .....+.|...|+.
T Consensus        67 ~~~~~~~~l~~~l~~~~~~   85 (161)
T d2fpwa1          67 DFDGPHNLMMQIFTSQGVQ   85 (161)
T ss_dssp             HHHHHHHHHHHHHHHTTCC
T ss_pred             Hhhhhhhhhhhhccccccc
Confidence                 11234566777776

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=6.9e-07  Score=71.16  Aligned_cols=50  Identities=12%  Similarity=0.187  Sum_probs=39.3

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC-eEEe
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK-KLFL  203 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~-~Lil  203 (212)
                      ....+.||+.++++.|+ +|++++++||.+..   .....|++.|+..|. .++.
T Consensus       106 ~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~---~~~~~l~~~gl~~~fd~i~~  156 (247)
T d2gfha1         106 QHMILADDVKAMLTELR-KEVRLLLLTNGDRQ---TQREKIEACACQSYFDAIVI  156 (247)
T ss_dssp             HTCCCCHHHHHHHHHHH-TTSEEEEEECSCHH---HHHHHHHHHTCGGGCSEEEE
T ss_pred             ccCccCccHHHHHHHhh-cccceEEeecccch---hhhhhhhhcccccccccccc
Confidence            34688999999999998 58999999998764   345678888998764 4553

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=98.27  E-value=6.8e-07  Score=69.71  Aligned_cols=49  Identities=18%  Similarity=0.219  Sum_probs=39.0

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeE
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKL  201 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~L  201 (212)
                      ....+.|++.++++.++++|++++++|+.+...   ....+...|+..+...
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~---~~~~~~~~~~~~~fd~  138 (220)
T d1zrna_          90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQS---IDAVVSHAGLRDGFDH  138 (220)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHTTCGGGCSE
T ss_pred             ccccccchhHHHHHHHHhcCCeEEeecchHHHH---HHHHHhhccccccccc
Confidence            346789999999999999999999999998653   3456777787765433

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.27  E-value=3.5e-07  Score=72.55  Aligned_cols=59  Identities=15%  Similarity=0.137  Sum_probs=45.9

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      .|.++||+||||+++.                          ..+-+++.+.++.|+++|++++++|||+.....   ..
T Consensus         3 iKli~~D~DGTL~~~~--------------------------~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~---~~   53 (225)
T d1l6ra_           3 IRLAAIDVDGNLTDRD--------------------------RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVY---AL   53 (225)
T ss_dssp             CCEEEEEHHHHSBCTT--------------------------SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHH---HH
T ss_pred             eEEEEEecCCCCcCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhH---HH
Confidence            5799999999999752                          156689999999999999999999999975433   23


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      ....|+..
T Consensus        54 ~~~~~~~~   61 (225)
T d1l6ra_          54 KIFLGING   61 (225)
T ss_dssp             HHHHTCCS
T ss_pred             HHHcCCCc
Confidence            34446654

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.5e-06  Score=68.06  Aligned_cols=95  Identities=14%  Similarity=0.061  Sum_probs=61.3

Q ss_pred             CCceEEEecCCCCCCChhhHhh---hcCCCC---------CCC-HH--------HHHHHHH----h---cCCCCChhHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAA---HGFGSE---------IFN-ED--------AFDEWVD----L---AKAPALPASLT  160 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~---~~~g~~---------~~~-~~--------~~~~wv~----~---~~~~~~pg~le  160 (212)
                      ++.-|.+||||||+|....+.+   ..++..         .|. .+        ....+..    .   ...+|+||+.+
T Consensus         2 ~~mrI~iDmDGVL~Df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ff~~L~p~~gA~e   81 (195)
T d1q92a_           2 RALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELEPLPGAVE   81 (195)
T ss_dssp             CCEEEEECSBTTTBCHHHHHHHHHHHHCTTSCCCCGGGCCSSCHHHHHHHHSTTHHHHHHHHHTSTTTTTTCCBCTTHHH
T ss_pred             CccEEEEECCCccccCHHHHHHHHHHHcCCccccChhhhccchhHHHhCCCcHHHHHHHHHHhhhhhHHhhCCcccCHHH
Confidence            3456899999999998765543   123321         111 11        1122221    1   46799999999


Q ss_pred             HHHHHHHCC-CeEEEEcCCChh---chHHHHHHHHHCC-CCCCCeEEe
Q 028215          161 FYKELKQLG-FKIFLLTGRNEF---QRNTTEKNLLFAG-YSDWKKLFL  203 (212)
Q Consensus       161 ll~~Lk~~G-~kI~~vTgR~~~---~~~~T~~nL~~~G-~~~~~~Lil  203 (212)
                      ++++|++.| +.++++|+++..   ....+.+||+++. ...+.++++
T Consensus        82 ~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~  129 (195)
T d1q92a_          82 AVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVL  129 (195)
T ss_dssp             HHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEE
T ss_pred             HHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEE
Confidence            999999865 578999998854   2456888999873 222445555

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.24  E-value=6.3e-07  Score=70.27  Aligned_cols=43  Identities=7%  Similarity=0.038  Sum_probs=33.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      ...++||+.++++.|+.   +.+++|+.....   ....|++.|+..+.
T Consensus        83 ~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~---~~~~l~~~~l~~~f  125 (222)
T d2fdra1          83 DVKIIDGVKFALSRLTT---PRCICSNSSSHR---LDMMLTKVGLKPYF  125 (222)
T ss_dssp             HCCBCTTHHHHHHHCCS---CEEEEESSCHHH---HHHHHHHTTCGGGT
T ss_pred             ccchhhhHHHHhhhccc---cceeeeecchhh---hhhhhccccccccc
Confidence            47889999999988764   557889987753   34778999998874

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=2.3e-06  Score=66.93  Aligned_cols=44  Identities=9%  Similarity=0.138  Sum_probs=36.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      ..++||+.+++++|+++|++++++||.+...   ....+...|+..+
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~---~~~~~~~~~~~~~  169 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEA---QKLLFGHSTEGDI  169 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHTBTTBCC
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHH---HHHHHHHcCcchh
Confidence            4689999999999999999999999998753   3356777777654

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.11  E-value=1.1e-06  Score=68.27  Aligned_cols=48  Identities=25%  Similarity=0.337  Sum_probs=36.2

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      -++|||||||++..+..                     ....+.|.+.+.+++|+++ ..++++|||+..
T Consensus         2 Li~~DlDGTL~~~~~~~---------------------~~~~i~~~~~~~l~~l~~~-~~v~i~TGR~~~   49 (229)
T d1u02a_           2 LIFLDYDGTLVPIIMNP---------------------EESYADAGLLSLISDLKER-FDTYIVTGRSPE   49 (229)
T ss_dssp             EEEEECBTTTBCCCSCG---------------------GGCCCCHHHHHHHHHHHHH-SEEEEECSSCHH
T ss_pred             EEEEEecCCCCCCCCCh---------------------hhCCCCHHHHHHHHHHhhC-CCEEEEcCCCHH
Confidence            47999999999752210                     1125678899999999875 679999999864

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2.9e-06  Score=65.96  Aligned_cols=43  Identities=23%  Similarity=0.286  Sum_probs=32.8

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      .++|||||||+++.                          ..+-|.+.+.+++|+++|+ ++++|||...
T Consensus         3 i~lFDlDGTLl~~~--------------------------~~is~~~~~~i~~l~~~g~-~~i~tgrr~~   45 (244)
T d2fuea1           3 LCLFDVDGTLTPAR--------------------------QKIDPEVAAFLQKLRSRVQ-IGVVGGSDYC   45 (244)
T ss_dssp             EEEEESBTTTBSTT--------------------------SCCCHHHHHHHHHHTTTSE-EEEECSSCHH
T ss_pred             EEEEccccCccCCC--------------------------CcCCHHHHHHHHHHHhCCC-EEEEecCChh
Confidence            45689999999751                          1456788999999999996 5677777643

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.1e-06  Score=67.74  Aligned_cols=31  Identities=19%  Similarity=0.040  Sum_probs=27.2

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      ...+.|++.+++..|+++|++++++|+....
T Consensus        97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~  127 (225)
T d1zd3a1          97 ARKINRPMLQAALMLRKKGFTTAILTNTWLD  127 (225)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred             cCCCCccHHHHHHHHHhccCccccccccchh
Confidence            3578999999999999999999999987544

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.97  E-value=6.6e-06  Score=62.76  Aligned_cols=87  Identities=22%  Similarity=0.235  Sum_probs=55.4

Q ss_pred             CCceEEEecCCCCCCChhhHhh-hcCCC-------------CCCCH-HHHHHHHH-------------hcCCCCChhHHH
Q 028215          109 GKDAWVFDIDETLLSNLPYYAA-HGFGS-------------EIFNE-DAFDEWVD-------------LAKAPALPASLT  160 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~-~~~g~-------------~~~~~-~~~~~wv~-------------~~~~~~~pg~le  160 (212)
                      ++|.|+||+||||+++.....- ..+|.             ..+.. +.......             ....++.+++.+
T Consensus         3 kkKlv~FDlDGTL~d~es~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (210)
T d1j97a_           3 KKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEE   82 (210)
T ss_dssp             CCCEEEECCCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHTCCBCTTHHH
T ss_pred             CCeEEEEeCCCCcCCchHHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHHhhhHHHHHHHHhhhhhhhhhHHH
Confidence            5899999999999987643321 11221             00111 01111111             246789999999


Q ss_pred             HHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCC
Q 028215          161 FYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDW  198 (212)
Q Consensus       161 ll~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~  198 (212)
                      +++.++.+|..++++|+.......   ..+.+.+...+
T Consensus        83 ~i~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  117 (210)
T d1j97a_          83 TIKELKNRGYVVAVVSGGFDIAVN---KIKEKLGLDYA  117 (210)
T ss_dssp             HHHHHHHTTCEEEEEEEEEHHHHH---HHHHHHTCSEE
T ss_pred             HHHHHHHcCCEEEeeccccccccc---chhhccchhhh
Confidence            999999999999999998765433   45555566543

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=97.96  E-value=8.5e-06  Score=64.12  Aligned_cols=47  Identities=17%  Similarity=0.123  Sum_probs=36.2

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCCeEE
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWKKLF  202 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~~Li  202 (212)
                      ..++.|++.+++++|+  |+.++++|+.+....   ...+.+.|+..+...+
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~---~~~~~~~~~~~~fd~v  137 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDML---QALVANAGLTDSFDAV  137 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHH---HHHHHHTTCGGGCSEE
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccchHHH---HHHHhhcccccccccc
Confidence            4688999999999885  789999999987543   3577788888764433

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.96  E-value=5.1e-06  Score=67.24  Aligned_cols=46  Identities=22%  Similarity=0.265  Sum_probs=36.6

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhc
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQ  182 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~  182 (212)
                      .|.++|||||||+++.                          ..+-|.+.+.+++|++.| .++++|||+...
T Consensus         2 ~Kli~~DlDGTL~~~~--------------------------~~i~~~~~~al~~l~~~~-~~~i~TGR~~~~   47 (267)
T d1nf2a_           2 YRVFVFDLDGTLLNDN--------------------------LEISEKDRRNIEKLSRKC-YVVFASGRMLVS   47 (267)
T ss_dssp             BCEEEEECCCCCSCTT--------------------------SCCCHHHHHHHHHHTTTS-EEEEECSSCHHH
T ss_pred             eEEEEEeCCccccCCc--------------------------CccCHHHHHHHHHHHcCC-EEEEECCCChHH
Confidence            4689999999999751                          145678899999998655 799999998653

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.95  E-value=2.6e-06  Score=67.91  Aligned_cols=57  Identities=18%  Similarity=0.154  Sum_probs=39.3

Q ss_pred             CceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHH
Q 028215          110 KDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKN  189 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~n  189 (212)
                      +..++||+||||+++...                            +...+-+.+++++|+.++++|||+....   .+.
T Consensus         3 ~~li~~DlDGTL~~~~~~----------------------------~~~~~~~~~~~~~g~~v~i~TGR~~~~~---~~~   51 (244)
T d1s2oa1           3 QLLLISDLDNTWVGDQQA----------------------------LEHLQEYLGDRRGNFYLAYATGRSYHSA---REL   51 (244)
T ss_dssp             SEEEEECTBTTTBSCHHH----------------------------HHHHHHHHHTTGGGEEEEEECSSCHHHH---HHH
T ss_pred             ceEEEEECcccCCCCCCC----------------------------HHHHHHHHHHHcCCCEEEEECCCCHHHH---HHH
Confidence            456788999999976321                            1223345567889999999999997543   356


Q ss_pred             HHHCCCCC
Q 028215          190 LLFAGYSD  197 (212)
Q Consensus       190 L~~~G~~~  197 (212)
                      ++..++..
T Consensus        52 ~~~~~~~~   59 (244)
T d1s2oa1          52 QKQVGLME   59 (244)
T ss_dssp             HHHHTCCC
T ss_pred             HHHcCCCC
Confidence            66667754

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=2e-06  Score=66.94  Aligned_cols=49  Identities=14%  Similarity=0.047  Sum_probs=34.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEcCCChhch-HHHHHHHHHCCCCCCC
Q 028215          151 KAPALPASLTFYKELKQLGFKIFLLTGRNEFQR-NTTEKNLLFAGYSDWK  199 (212)
Q Consensus       151 ~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~-~~T~~nL~~~G~~~~~  199 (212)
                      ...+.|++.++++.|+++|++++++|+...... ......+...|+..|.
T Consensus        95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f  144 (222)
T d1cr6a1          95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF  144 (222)
T ss_dssp             TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC
T ss_pred             cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh
Confidence            457899999999999999999999998654321 1222344555666553

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=1.4e-05  Score=63.69  Aligned_cols=58  Identities=21%  Similarity=0.306  Sum_probs=40.4

Q ss_pred             CCCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCC
Q 028215          108 DGKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRN  179 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~  179 (212)
                      ...++++||.||||+...+.   ..|-.   ++..|        .-..|++.+.++.|.++|+.++++||-+
T Consensus        19 ~~~Kia~fDrDGtLik~~~~---~~~~~---~~~d~--------~~l~~~v~~~i~~L~~~gy~iiIvTNQ~   76 (195)
T d1yj5a1          19 PQGKVAAFDLDGTLITTRSG---KVFPT---SPSDW--------RILYPEIPKKLQELAAEGYKLVIFTNQM   76 (195)
T ss_dssp             CCSCEEEECSBTTTEECSSS---CSSCS---STTCC--------EESCTTHHHHHHHHHHHTCEEEEEEECH
T ss_pred             CcCcEEEEECCCceEeeCCC---CcCCC---Chhhc--------eeccCCHHHHHHHHHhCCcEEEEecCcc
Confidence            45789999999999864221   00110   11111        1236999999999999999999999964

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=5.5e-05  Score=56.24  Aligned_cols=30  Identities=17%  Similarity=0.473  Sum_probs=26.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          152 APALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       152 ~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      ..+.+++.+++..++.+|++++++|+.+..
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~  112 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTNRL  112 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCccHH
Confidence            478899999999999999999999987644

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.17  E-value=0.0005  Score=57.54  Aligned_cols=45  Identities=18%  Similarity=0.230  Sum_probs=38.3

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCC
Q 028215          150 AKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSD  197 (212)
Q Consensus       150 ~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~  197 (212)
                      ...+..||+.+|++.|+++|++++++||--..   ....-|++.|++.
T Consensus       132 ~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~---~ie~vl~~lg~~~  176 (291)
T d2bdua1         132 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGD---VLEEVIRQAGVYH  176 (291)
T ss_dssp             SCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHH---HHHHHHHHTTCCB
T ss_pred             cCCCcccCHHHHHHHHHHcCCeEEEEcCChHH---HHHHHHHHcCCCc
Confidence            45788999999999999999999999997654   5557888889873

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.00083  Score=52.01  Aligned_cols=82  Identities=21%  Similarity=0.123  Sum_probs=51.1

Q ss_pred             CCCCceEEEecCCCCCCChhhHhhhcCCCCCCC-HHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHH
Q 028215          107 GDGKDAWVFDIDETLLSNLPYYAAHGFGSEIFN-EDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNT  185 (212)
Q Consensus       107 ~~~~~avvfDIDgTLldn~~~~~~~~~g~~~~~-~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~  185 (212)
                      ..++..+|+|+||||+.+..-...    ...+. ................||+.+||+.+.+. +.|++-|+..+...+.
T Consensus        12 ~~~k~~LVLDLDeTLihs~~~~~~----~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~   86 (181)
T d1ta0a_          12 DSDKICVVIDLDETLVHSSFKPVN----NADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADP   86 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCCT----TCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHH
T ss_pred             cCCCeEEEEeCCCCEEccccCCCC----CccceeeecccceeeeeEEecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHH
Confidence            457889999999999975321000    00000 00000000001134689999999999766 9999999999988777


Q ss_pred             HHHHHHHC
Q 028215          186 TEKNLLFA  193 (212)
Q Consensus       186 T~~nL~~~  193 (212)
                      ..+.|...
T Consensus        87 il~~ldp~   94 (181)
T d1ta0a_          87 VADLLDKW   94 (181)
T ss_dssp             HHHHHCSS
T ss_pred             HHHHhccC
Confidence            77777543

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.78  E-value=0.00024  Score=53.59  Aligned_cols=15  Identities=13%  Similarity=0.344  Sum_probs=13.0

Q ss_pred             CceEEEecCCCCCCC
Q 028215          110 KDAWVFDIDETLLSN  124 (212)
Q Consensus       110 ~~avvfDIDgTLldn  124 (212)
                      .+.|+|||||||++.
T Consensus         2 mkli~fDlDGTLl~e   16 (206)
T d1rkua_           2 MEIACLDLEGVLVPE   16 (206)
T ss_dssp             CEEEEEESBTTTBCC
T ss_pred             cEEEEEcCccchHHH
Confidence            578999999999963

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.11  E-value=0.0092  Score=43.95  Aligned_cols=58  Identities=22%  Similarity=0.202  Sum_probs=45.2

Q ss_pred             ceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHH
Q 028215          111 DAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNL  190 (212)
Q Consensus       111 ~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL  190 (212)
                      .+++||.+||+.-.        +                 ..++.|++.+.++.|++.|+++.++||.......    .+
T Consensus         4 ~~~~~d~~~~~~~g--------~-----------------~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~----~i   54 (135)
T d2b8ea1           4 TAVIFDKTGTLTKG--------K-----------------PDTLKESAKPAVQELKRMGIKVGMITGDNWRSAE----AI   54 (135)
T ss_dssp             CEEEEECCCCCBCS--------C-----------------CCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHH----HH
T ss_pred             EEEEECCceEEEEe--------c-----------------CCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhh----HH
Confidence            47899999998642        1                 2488999999999999999999999998875333    33


Q ss_pred             -HHCCCCC
Q 028215          191 -LFAGYSD  197 (212)
Q Consensus       191 -~~~G~~~  197 (212)
                       ++.|+..
T Consensus        55 a~~lgI~~   62 (135)
T d2b8ea1          55 SRELNLDL   62 (135)
T ss_dssp             HHHHTCSE
T ss_pred             Hhhhhhhh
Confidence             5567763

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=96.04  E-value=0.002  Score=49.75  Aligned_cols=57  Identities=21%  Similarity=0.230  Sum_probs=37.6

Q ss_pred             CCceEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChh
Q 028215          109 GKDAWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEF  181 (212)
Q Consensus       109 ~~~avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~  181 (212)
                      +.+.+|||+||+|.|..-++...+-.-..|+..+              +  --++.|+..|+.++++|++...
T Consensus         4 ~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~D--------------g--~gi~~l~~~gi~~~iis~~~~~   60 (177)
T d1k1ea_           4 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRD--------------G--LGIKMLMDADIQVAVLSGRDSP   60 (177)
T ss_dssp             GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHH--------------H--HHHHHHHHTTCEEEEEESCCCH
T ss_pred             cCeEEEEccCCcccCCeEEEeCCCCEEEEEECcc--------------h--HHHHHHhhhcEEEEEecCCchh
Confidence            4689999999999987555443211001122111              1  2478889999999999998754

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.94  E-value=0.0017  Score=49.29  Aligned_cols=18  Identities=22%  Similarity=0.388  Sum_probs=15.5

Q ss_pred             CCCceEEEecCCCCCCCh
Q 028215          108 DGKDAWVFDIDETLLSNL  125 (212)
Q Consensus       108 ~~~~avvfDIDgTLldn~  125 (212)
                      ++.++|+|||||||+|+.
T Consensus         1 ~~~~~~lfD~dGTl~d~~   18 (225)
T d2g80a1           1 DNYSTYLLDIEGTVCPIS   18 (225)
T ss_dssp             CCCSEEEECCBTTTBCTH
T ss_pred             CCCCEEEEcCCCCCcccH
Confidence            357899999999999974

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.50  E-value=0.013  Score=44.59  Aligned_cols=58  Identities=17%  Similarity=0.136  Sum_probs=45.5

Q ss_pred             eEEEecCCCCCCChhhHhhhcCCCCCCCHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHH
Q 028215          112 AWVFDIDETLLSNLPYYAAHGFGSEIFNEDAFDEWVDLAKAPALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLL  191 (212)
Q Consensus       112 avvfDIDgTLldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~  191 (212)
                      .++||.+||+.-+.                         -.|+.|++.+.++.|++.|+++.++||-.....   ...-+
T Consensus         4 ~~~~d~~~~~~~~~-------------------------~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA---~~ia~   55 (168)
T d1wpga2           4 VICSDKTGTLTTNQ-------------------------LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTA---IAICR   55 (168)
T ss_dssp             EEEECCTTTTBCCC-------------------------ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHH
T ss_pred             EEEECCccEEEEEe-------------------------cCCCchhHHHHHHHHHHCcCEEEEECCCCHHHH---HHHHH
Confidence            67899999998651                         138999999999999999999999999876432   23345


Q ss_pred             HCCCCC
Q 028215          192 FAGYSD  197 (212)
Q Consensus       192 ~~G~~~  197 (212)
                      +.|+..
T Consensus        56 ~~Gi~~   61 (168)
T d1wpga2          56 RIGIFG   61 (168)
T ss_dssp             HTTSSC
T ss_pred             HcCCCC
Confidence            678753

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=95.36  E-value=0.0056  Score=52.18  Aligned_cols=44  Identities=20%  Similarity=0.222  Sum_probs=36.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCChhchHHHHHHHHHCCCCCCC
Q 028215          153 PALPASLTFYKELKQLGFKIFLLTGRNEFQRNTTEKNLLFAGYSDWK  199 (212)
Q Consensus       153 ~~~pg~lell~~Lk~~G~kI~~vTgR~~~~~~~T~~nL~~~G~~~~~  199 (212)
                      +|.||+.++++.|+++|++++++||+++..   +..-++++|+..|.
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~---a~~il~~lgl~~~F  258 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTE---TVVPFENLGLLPYF  258 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCGGGS
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHHcCCcccC
Confidence            467799999999999999999999999864   44667778887653

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=81.99  E-value=0.28  Score=41.05  Aligned_cols=20  Identities=25%  Similarity=0.453  Sum_probs=17.4

Q ss_pred             CceEEEecCCCCCCChhhHh
Q 028215          110 KDAWVFDIDETLLSNLPYYA  129 (212)
Q Consensus       110 ~~avvfDIDgTLldn~~~~~  129 (212)
                      .+.|+||+||++++...+|-
T Consensus         1 ~~~i~fd~dGVll~~~~~~D   20 (380)
T d1qyia_           1 MKKILFDVDGVFLSEERCFD   20 (380)
T ss_dssp             CCEEEECSBTTTBCSHHHHH
T ss_pred             CceEEEeCCcEEEcceeecc
Confidence            36899999999999988874