Citrus Sinensis ID: 028253

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-
MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
cEEEEEccccccEEEEEEEEEcccccccEEEEEEEccccccccEEEEEEEEccccccEEEEEcccccccccEEEEEEEcccEEEEEEccEEEEEEEccccccccccccccEEEEEEccccccccccEEEEccccccEEEEEEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccccc
ccEEEEccccccEEEEEEEcccccccccEEEEEEccccccccEEEEEEEEEccEccccEEEEcccccccccEEEEEEEEccEEEEEEccccEEEEEcccccccccccccEEEEEEcccccHcHccccEEcccccccEEEEEcccccccEEcccccccccccccccccHHHHHccHHHHHHHHHHHHccEEEEccccccccccccccHcccc
mkiklvpgdsagTVTAFYMNsntenvrdeldfeflgnrtgqpytvqtniyangkgdreqrvnlwfdpaadyHLYTILWNHHHIvfyvddvpirvyknsgrapfpmnqpmgvystlweaddwatrgglekidwskapfyayyrdfdiegcpvpgpancasnpgnwweaNNYQALTAMEARRYRWVRLNHMIYdyctdksrypvpppeclagi
mkiklvpgdsagTVTAFYMNSNTENVRDELDFEFlgnrtgqpytVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNsgrapfpmnqPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDyctdksrypvppPECLAGI
MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
************TVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSR************
*K**L**GDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGP*********************MEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
*KIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASN*GNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query211 2.2.26 [Sep-21-2011]
Q8LF99292 Probable xyloglucan endot yes no 0.990 0.715 0.810 1e-102
Q8LER3293 Probable xyloglucan endot no no 1.0 0.720 0.774 1e-100
Q9XIW1293 Probable xyloglucan endot no no 0.971 0.699 0.601 6e-73
P93349295 Probable xyloglucan endot N/A no 0.976 0.698 0.589 1e-71
Q40144296 Probable xyloglucan endot N/A no 0.976 0.695 0.580 3e-71
Q41542293 Probable xyloglucan endot N/A no 0.971 0.699 0.597 7e-70
Q39857295 Probable xyloglucan endot no no 0.976 0.698 0.597 1e-69
Q8LNZ5293 Probable xyloglucan endot N/A no 0.976 0.703 0.576 3e-69
Q41638292 Xyloglucan endotransgluco N/A no 0.976 0.705 0.595 3e-69
Q6YDN9295 Xyloglucan endotransgluco N/A no 0.976 0.698 0.571 3e-68
>sp|Q8LF99|XTH6_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2 Back     alignment and function desciption
 Score =  372 bits (954), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 171/211 (81%), Positives = 189/211 (89%), Gaps = 2/211 (0%)

Query: 1   MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQR 60
           MKIKL+PGDSAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQR
Sbjct: 82  MKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQR 141

Query: 61  VNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEA 118
           VNLWFDP+ DYH YTILW+H HIVFYVDDVPIR YKN  +    +P +QPMGVYSTLWEA
Sbjct: 142 VNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEA 201

Query: 119 DDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEA 178
           DDWATRGGLEKIDWSKAPFYAYY+DFDIEGCPVPGP  C SNP NWWE   YQ+L A+EA
Sbjct: 202 DDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEA 261

Query: 179 RRYRWVRLNHMIYDYCTDKSRYPVPPPECLA 209
           RRYRWVR+NHM+YDYCTD+SR+PVPPPEC A
Sbjct: 262 RRYRWVRVNHMVYDYCTDRSRFPVPPPECRA 292
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q8LER3|XTH7_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2 Back     alignment and function description
>sp|Q9XIW1|XTH5_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1 Back     alignment and function description
>sp|P93349|XTH_TOBAC Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q40144|XTH1_SOLLC Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1 Back     alignment and function description
>sp|Q41542|XTH_WHEAT Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q39857|XTH_SOYBN Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q8LNZ5|XTHB_PHAAN Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1 Back     alignment and function description
>sp|Q41638|XTHA_PHAAN Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1 Back     alignment and function description
>sp|Q6YDN9|XTH_BRAOB Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query211
308229784290 xyloglucan endotransglucosylase/hydrolas 1.0 0.727 0.868 1e-109
308229792290 putative xyloglucan endotransglucosylase 1.0 0.727 0.863 1e-108
308229782289 xyloglucan endotransglucosylase/hydrolas 1.0 0.730 0.859 1e-108
124109183294 xyloglucan endotransglycosylase/hydrolas 1.0 0.717 0.859 1e-108
308229790289 putative xyloglucan endotransglucosylase 1.0 0.730 0.854 1e-107
224095005296 predicted protein [Populus trichocarpa] 1.0 0.712 0.845 1e-106
356497025294 PREDICTED: probable xyloglucan endotrans 1.0 0.717 0.854 1e-106
308229788289 putative xyloglucan endotransglucosylase 1.0 0.730 0.840 1e-106
340396652293 xyloglucan endotransglucosylase/hydrolas 1.0 0.720 0.830 1e-105
300087130293 xyloglucan endotransglycosylase [Dahlia 1.0 0.720 0.830 1e-105
>gi|308229784|gb|ADO24300.1| xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 185/213 (86%), Positives = 197/213 (92%), Gaps = 2/213 (0%)

Query: 1   MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQR 60
           MKIKL+PGDSAGTVTAFYMNS+T+ VRDELDFEFLGNRTGQPYTVQTNIYA+GKGDREQR
Sbjct: 78  MKIKLIPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNRTGQPYTVQTNIYAHGKGDREQR 137

Query: 61  VNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEA 118
           VNLWFDPAAD+H YTI+WNHHHIVFYVD+VPIRVYKN  +   P+P  QPMGVYSTLWEA
Sbjct: 138 VNLWFDPAADFHTYTIMWNHHHIVFYVDEVPIRVYKNNEAKNIPYPKFQPMGVYSTLWEA 197

Query: 119 DDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEA 178
           DDWATRGGLEKIDWSKAPF AYY+DFDIEGCPVPGPANCASNP NWWE   YQAL AMEA
Sbjct: 198 DDWATRGGLEKIDWSKAPFLAYYKDFDIEGCPVPGPANCASNPRNWWEGTAYQALNAMEA 257

Query: 179 RRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI 211
           RRYRWVR+NHMIYDYCTDKSRYPV PPEC+AGI
Sbjct: 258 RRYRWVRMNHMIYDYCTDKSRYPVTPPECMAGI 290

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|308229792|gb|ADO24304.1| putative xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|308229782|gb|ADO24299.1| xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|124109183|gb|ABM91067.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-36 [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|308229790|gb|ADO24303.1| putative xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|224095005|ref|XP_002310324.1| predicted protein [Populus trichocarpa] gi|222853227|gb|EEE90774.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356497025|ref|XP_003517365.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 6-like [Glycine max] Back     alignment and taxonomy information
>gi|308229788|gb|ADO24302.1| putative xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|340396652|gb|AEK32594.1| xyloglucan endotransglucosylase/hydrolase [Tagetes patula] Back     alignment and taxonomy information
>gi|300087130|gb|ADJ67812.1| xyloglucan endotransglycosylase [Dahlia pinnata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query211
TAIR|locus:2169990292 XTH6 "xyloglucan endotransgluc 0.990 0.715 0.810 3.9e-99
TAIR|locus:2137609293 XTH7 "xyloglucan endotransgluc 1.0 0.720 0.774 6.6e-97
TAIR|locus:2159118293 XTH5 "xyloglucan endotransgluc 0.971 0.699 0.601 7.7e-71
TAIR|locus:2823919305 XTH8 "xyloglucan endotransgluc 0.981 0.678 0.562 3.2e-65
TAIR|locus:2065821296 XTH4 "xyloglucan endotransgluc 0.976 0.695 0.561 6.7e-65
TAIR|locus:2125437290 XTH9 "xyloglucan endotransgluc 0.976 0.710 0.551 8.8e-63
TAIR|locus:2064284299 XTH10 "xyloglucan endotransglu 0.976 0.688 0.523 1e-59
TAIR|locus:2095168291 XTH16 "xyloglucan endotransglu 0.976 0.707 0.532 9.3e-59
TAIR|locus:2086959290 XTH3 "xyloglucan endotransgluc 0.966 0.703 0.507 1.9e-58
TAIR|locus:2162652282 XTH20 "xyloglucan endotransglu 0.952 0.712 0.502 1.9e-58
TAIR|locus:2169990 XTH6 "xyloglucan endotransglucosylase/hydrolase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 984 (351.4 bits), Expect = 3.9e-99, P = 3.9e-99
 Identities = 171/211 (81%), Positives = 189/211 (89%)

Query:     1 MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQR 60
             MKIKL+PGDSAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQR
Sbjct:    82 MKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQR 141

Query:    61 VNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEA 118
             VNLWFDP+ DYH YTILW+H HIVFYVDDVPIR YKN+      +P +QPMGVYSTLWEA
Sbjct:   142 VNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEA 201

Query:   119 DDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEA 178
             DDWATRGGLEKIDWSKAPFYAYY+DFDIEGCPVPGP  C SNP NWWE   YQ+L A+EA
Sbjct:   202 DDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEA 261

Query:   179 RRYRWVRLNHMIYDYCTDKSRYPVPPPECLA 209
             RRYRWVR+NHM+YDYCTD+SR+PVPPPEC A
Sbjct:   262 RRYRWVRVNHMVYDYCTDRSRFPVPPPECRA 292
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
GO:0009414 "response to water deprivation" evidence=IEP
GO:0009269 "response to desiccation" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
TAIR|locus:2137609 XTH7 "xyloglucan endotransglucosylase/hydrolase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159118 XTH5 "xyloglucan endotransglucosylase/hydrolase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2823919 XTH8 "xyloglucan endotransglucosylase/hydrolase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065821 XTH4 "xyloglucan endotransglucosylase/hydrolase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125437 XTH9 "xyloglucan endotransglucosylase/hydrolase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2064284 XTH10 "xyloglucan endotransglucosylase/hydrolase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095168 XTH16 "xyloglucan endotransglucosylase/hydrolase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086959 XTH3 "xyloglucan endotransglucosylase/hydrolase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162652 XTH20 "xyloglucan endotransglucosylase/hydrolase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8LF99XTH6_ARATH2, ., 4, ., 1, ., 2, 0, 70.81040.99050.7157yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query211
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-136
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 2e-84
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 1e-61
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 5e-26
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 1e-19
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 8e-17
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 1e-16
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 3e-12
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 1e-06
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  381 bits (981), Expect = e-136
 Identities = 129/211 (61%), Positives = 160/211 (75%), Gaps = 4/211 (1%)

Query: 1   MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQR 60
           M+IKL PGDSAGTVTAFY++S   +  DE+DFEFLGN TGQPYT+QTN++ANG G REQR
Sbjct: 53  MRIKLPPGDSAGTVTAFYLSSQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQR 112

Query: 61  VNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEA 118
           + LWFDP AD+H Y+ILWN H IVFYVDDVPIRV+KN+     P+P +QPMGVY+++W+ 
Sbjct: 113 IYLWFDPTADFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDG 172

Query: 119 DDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPG--NWWEANNYQALTAM 176
            DWAT+GG  KIDWS APF A YRDF ++GC V    + +S     +WW  + YQ L+A 
Sbjct: 173 SDWATQGGRVKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSAN 232

Query: 177 EARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 207
           + R   WVR N+M+YDYC D+ RYPVPPPEC
Sbjct: 233 QQRAMEWVRRNYMVYDYCDDRKRYPVPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 211
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 99.96
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 99.96
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 99.96
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 99.96
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.95
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.94
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.93
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.91
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.91
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.87
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.86
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.04
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 98.95
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 91.86
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 91.33
PF10287235 DUF2401: Putative TOS1-like glycosyl hydrolase (DU 90.05
smart00560133 LamGL LamG-like jellyroll fold domain. 89.98
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 87.83
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 86.66
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 83.21
cd00110151 LamG Laminin G domain; Laminin G-like domains are 81.87
cd00152201 PTX Pentraxins are plasma proteins characterized b 80.6
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-74  Score=506.16  Aligned_cols=209  Identities=53%  Similarity=1.013  Sum_probs=194.6

Q ss_pred             CEEEecCCCCCceEEEEEEecCCCCCCCcEEEEEcCCCCCCCcEEEEEEEeCCCCCcceeEecCCCCCCCcEEEEEEEcC
Q 028253            1 MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNH   80 (211)
Q Consensus         1 ~riKl~~~~s~G~v~Afwl~s~~~~~~dEIDiE~lG~~~g~p~~~~tn~~~~g~~~~~~~~~l~fdp~~dFH~Y~i~W~~   80 (211)
                      ||||||+|+++|+||||||++.++. ||||||||||+++++|+++|||+|.+|.+++++++.++|||+++||+|+|+|+|
T Consensus        74 ~riKLp~G~saG~v~AFwl~s~~~~-~dEIDiEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp  152 (291)
T PLN03161         74 MLIKLVPGNSAGTVTAYYLSSTGSR-HDEIDFEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNP  152 (291)
T ss_pred             EEEEeCCCCCCCeEEEEEecCCCCC-CCeEEEEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEch
Confidence            6899999999999999999997666 999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEECCeEEEEEeCCCC--CCCCCCCCceEEEeeeeCCCcccCCCCcccCCCCCCEEEEEeEEEEeecCCCC---CC
Q 028253           81 HHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPG---PA  155 (211)
Q Consensus        81 ~~I~fyVDg~~vr~~~~~~~--~~~P~~~Pm~l~lnlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~v~v~~c~~~~---~~  155 (211)
                      ++|+|||||++||++++.+.  .+||+.+||+|++|||+|++|||+||++||||+++||+|.|++|+++||.+.+   ..
T Consensus       153 ~~I~wyVDG~~iRt~~~~~~~g~~yP~~~pM~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~  232 (291)
T PLN03161        153 SEVVWYVDGTPIRVFRNYENEGIAYPNKQGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIK  232 (291)
T ss_pred             hhEEEEECCEEEEEEEcccccCCcCCCccceEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCcc
Confidence            99999999999999987654  67998899999999999999999999999999999999999999999998732   34


Q ss_pred             cCCCC-CCCcccccCcccCCHHHHHHHHHHhhcCeEeecCcCCCCCCC-CCCCCcCC
Q 028253          156 NCASN-PGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPV-PPPECLAG  210 (211)
Q Consensus       156 ~C~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~YdYC~D~~r~~~-~p~eC~~~  210 (211)
                      .|.+. +..||+++.|++|+++|+++|+|||+||||||||+|++|||+ +||||.++
T Consensus       233 ~c~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~~  289 (291)
T PLN03161        233 QCADPTPSNWWTSPSYSQLTNAQLTQMKKVRDNFMIYDYCKDTKRFNGVMPPECFKP  289 (291)
T ss_pred             ccCCCCccccccCccccCCCHHHHHHHHHHHhCcEEEeccCCCCcCCCCcCcccCCC
Confidence            79754 467999989999999999999999999999999999999998 89999764

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information
>cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans Back     alignment and domain information
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query211
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 3e-75
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 8e-46
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 8e-46
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 4e-44
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 6e-44
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 1e-11
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 1e-09
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 2e-09
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 2e-09
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 2e-09
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 2e-09
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 2e-09
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 3e-09
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 9e-09
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 3e-08
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 2e-07
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  277 bits (709), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 131/211 (62%), Positives = 158/211 (74%), Gaps = 6/211 (2%)
Query: 1   MKIKLVPGDSAGTVTAFYMNS-NTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQ 59
           M++KLVPGDSAGTVTAFY++S N+E+  DE+DFEFLGNRTGQPY +QTN++  GKGDREQ
Sbjct: 64  MQMKLVPGDSAGTVTAFYLSSQNSEH--DEIDFEFLGNRTGQPYILQTNVFTGGKGDREQ 121
Query: 60  RVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWE 117
           R+ LWFDP  ++H Y++LWN + IVF VDDVPIRV+KN       FP NQPM +YS+LW 
Sbjct: 122 RIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWN 181
Query: 118 ADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAM 176
           ADDWATRGGLEK DWSKAPF A YR F I+GC     A  CA+    WW+   +Q L A 
Sbjct: 182 ADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAF 241
Query: 177 EARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 207
           + RR  WVR  + IY+YCTD+SRYP  PPEC
Sbjct: 242 QYRRLSWVRQKYTIYNYCTDRSRYPSMPPEC 272
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query211
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 1e-90
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 2e-81
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 2e-54
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 5e-51
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 2e-48
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 1e-46
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 2e-45
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 6e-45
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 3e-41
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 3e-19
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 1e-08
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 7e-07
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 1e-06
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 2e-06
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 3e-06
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 4e-06
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 5e-06
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 8e-06
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 1e-05
3rq0_A269 Glycosyl hydrolases family protein 16; structural 2e-05
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 6e-05
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 2e-04
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 7e-04
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  266 bits (681), Expect = 1e-90
 Identities = 129/210 (61%), Positives = 154/210 (73%), Gaps = 4/210 (1%)

Query: 1   MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQR 60
           M++KLVPGDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR
Sbjct: 64  MQMKLVPGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQR 122

Query: 61  VNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRA--PFPMNQPMGVYSTLWEA 118
           + LWFDP  ++H Y++LWN + IVF VDDVPIRV+KN       FP NQPM +YS+LW A
Sbjct: 123 IYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNA 182

Query: 119 DDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAME 177
           DDWATRGGLEK DWSKAPF A YR F I+GC     A  CA+    WW+   +Q L A +
Sbjct: 183 DDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQ 242

Query: 178 ARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 207
            RR  WVR  + IY+YCTD+SRYP  PPEC
Sbjct: 243 YRRLSWVRQKYTIYNYCTDRSRYPSMPPEC 272
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query211
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 99.98
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 99.98
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 99.97
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 99.97
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 99.97
3rq0_A269 Glycosyl hydrolases family protein 16; structural 99.97
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 99.97
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 99.96
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 99.96
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 99.96
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 99.96
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 99.96
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.89
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.86
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.85
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 94.14
4dqa_A355 Uncharacterized protein; two domains structure, DU 87.09
3pvn_A206 C-reactive protein; pentraxin family, immune syste 86.04
3kqr_A204 Serum amyloid P-component; glycoprotein, disulfide 83.66
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=1.7e-70  Score=479.13  Aligned_cols=209  Identities=61%  Similarity=1.197  Sum_probs=195.4

Q ss_pred             CEEEecCCCCCceEEEEEEecCCCCCCCcEEEEEcCCCCCCCcEEEEEEEeCCCCCcceeEecCCCCCCCcEEEEEEEcC
Q 028253            1 MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNH   80 (211)
Q Consensus         1 ~riKl~~~~s~G~v~Afwl~s~~~~~~dEIDiE~lG~~~g~p~~~~tn~~~~g~~~~~~~~~l~fdp~~dFH~Y~i~W~~   80 (211)
                      ||||||+|+++|+||||||++++|. ++|||||++|+.+++|+++|+|+|.+|.+++++++.+++|++++||+|+|+|+|
T Consensus        64 ar~Klp~g~s~G~wpAfwll~~~p~-~gEIDmE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp  142 (278)
T 1umz_A           64 MQMKLVPGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNM  142 (278)
T ss_dssp             EEEECCCSCCTTEEEEEEEECSSSS-CCEEEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECS
T ss_pred             EEEEeCCCCCCceEEEEEEecCCCC-CCeEEEEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEec
Confidence            6899999989999999999999887 999999999999888999999999999989999999999999999999999999


Q ss_pred             CeEEEEECCeEEEEEeCCCC--CCCCCCCCceEEEeeeeCCCcccCCCCcccCCCCCCEEEEEeEEEEeecCCC-CCCcC
Q 028253           81 HHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVP-GPANC  157 (211)
Q Consensus        81 ~~I~fyVDg~~vr~~~~~~~--~~~P~~~Pm~l~lnlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~v~v~~c~~~-~~~~C  157 (211)
                      ++|+|||||++||++++.+.  .+|||++||+|+||||+||+|+++||++++||+++||+++|+.+++++|..+ +.++|
T Consensus       143 ~~I~fyVDG~~v~t~~~~~~~g~~~Pf~~P~~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~~~~~~c  222 (278)
T 1umz_A          143 YMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFC  222 (278)
T ss_dssp             SEEEEEETTEEEEEEECCGGGTCCCSCSSCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCC
T ss_pred             CeEEEEECCeEEEEEecCcCcCccCcCCCceEEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCCCCCCcc
Confidence            99999999999999987653  6799999999999999999999999988899999999999999999999874 34569


Q ss_pred             CCCCCCcccccCcccCCHHHHHHHHHHhhcCeEeecCcCCCCCCCCCCCCcCC
Q 028253          158 ASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAG  210 (211)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~YdYC~D~~r~~~~p~eC~~~  210 (211)
                      .+.+..||+++.+++|++.|+++|+|||+||||||||+|++|||++||||.++
T Consensus       223 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~yc~d~~r~~~~~~ec~~~  275 (278)
T 1umz_A          223 ATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTIYNYCTDRSRYPSMPPECKRD  275 (278)
T ss_dssp             TTTTCSGGGSGGGSSCCHHHHHHHHHHHHHTEEEEGGGCTTTCSSCCTHHHHH
T ss_pred             CCCcccccccCccccCCHHHHHHHHHHHHCCeEEecCCCCCcCCCCCcccCCC
Confidence            87667899998899999999999999999999999999999999999999643
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Back     alignment and structure
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Back     alignment and structure
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 211
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 1e-80
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 1e-40
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 6e-18
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 1e-12
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 7e-05
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  239 bits (611), Expect = 1e-80
 Identities = 129/210 (61%), Positives = 154/210 (73%), Gaps = 4/210 (1%)

Query: 1   MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQR 60
           M++KLVPGDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR
Sbjct: 53  MQMKLVPGDSAGTVTAFYLSSQNSEH-DEIDFEFLGNRTGQPYILQTNVFTGGKGDREQR 111

Query: 61  VNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEA 118
           + LWFDP  ++H Y++LWN + IVF VDDVPIRV+KN       FP NQPM +YS+LW A
Sbjct: 112 IYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNA 171

Query: 119 DDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAME 177
           DDWATRGGLEK DWSKAPF A YR F I+GC     A  CA+    WW+   +Q L A +
Sbjct: 172 DDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQ 231

Query: 178 ARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 207
            RR  WVR  + IY+YCTD+SRYP  PPEC
Sbjct: 232 YRRLSWVRQKYTIYNYCTDRSRYPSMPPEC 261
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query211
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 99.97
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 99.96
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.95
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.94
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.92
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.92
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 94.9
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 93.09
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 92.84
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 92.69
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 92.58
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 91.85
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 91.42
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 91.4
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 90.25
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 90.23
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=1.1e-71  Score=482.30  Aligned_cols=209  Identities=61%  Similarity=1.194  Sum_probs=197.0

Q ss_pred             CEEEecCCCCCceEEEEEEecCCCCCCCcEEEEEcCCCCCCCcEEEEEEEeCCCCCcceeEecCCCCCCCcEEEEEEEcC
Q 028253            1 MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNH   80 (211)
Q Consensus         1 ~riKl~~~~s~G~v~Afwl~s~~~~~~dEIDiE~lG~~~g~p~~~~tn~~~~g~~~~~~~~~l~fdp~~dFH~Y~i~W~~   80 (211)
                      ||||||+|.++|++++|||+++++. ++|||||++|+..++|+++|||+|.+|.+++++++.+++|++++||+|+|+|+|
T Consensus        53 ariKlp~G~g~g~~~~f~~~s~~~~-~dEIDiE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp  131 (267)
T d1umza_          53 MQMKLVPGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNM  131 (267)
T ss_dssp             EEEECCCSCCTTEEEEEEEECSSSS-CCEEEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECS
T ss_pred             EEEEcCCCCccEEEEEeeecCCCCC-CCeEEEEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECc
Confidence            6999999999999999999998887 999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEECCeEEEEEeCCCC--CCCCCCCCceEEEeeeeCCCcccCCCCcccCCCCCCEEEEEeEEEEeecCC-CCCCcC
Q 028253           81 HHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANC  157 (211)
Q Consensus        81 ~~I~fyVDg~~vr~~~~~~~--~~~P~~~Pm~l~lnlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~v~v~~c~~-~~~~~C  157 (211)
                      ++|+|||||++||++++.+.  .+||+++||+|++|||+||+|||+||+.++||+.+||+|.|++|+|++|.+ +....|
T Consensus       132 ~~I~fyVDG~~vr~~~n~~~~g~~~p~~~pm~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~~  211 (267)
T d1umza_         132 YMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFC  211 (267)
T ss_dssp             SEEEEEETTEEEEEEECCGGGTCCCSCSSCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCC
T ss_pred             ceEEEEECCEEEEEEeccccCCCCCCcceEEEEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCCCccc
Confidence            99999999999999998765  778889999999999999999999999999999999999999999999987 344557


Q ss_pred             CCCCCCcccccCcccCCHHHHHHHHHHhhcCeEeecCcCCCCCCCCCCCCcCC
Q 028253          158 ASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAG  210 (211)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~YdYC~D~~r~~~~p~eC~~~  210 (211)
                      ...+..||++..+++|+.+|+++|+|||+||||||||+|++|||.+||||.+|
T Consensus       212 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~yC~d~~r~~~~p~EC~~~  264 (267)
T d1umza_         212 ATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTIYNYCTDRSRYPSMPPECKRD  264 (267)
T ss_dssp             TTTTCSGGGSGGGSSCCHHHHHHHHHHHHHTEEEEGGGCTTTCSSCCTHHHHH
T ss_pred             CCCCCccccccccccCCHHHHHHHHHHHHCCcEEccCCCCCcCCCCCcccCCC
Confidence            66677899999999999999999999999999999999999999999999743
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure